Clone Information

BLAST Search Result

Clone Name	bags20c12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|XM_506148.1\| PREDICTED Oryza sativa (japonica cultivar-group...	424	e-115
2	ref\|XM_476451.1\| Oryza sativa (japonica cultivar-group), mRNA	424	e-115
3	dbj\|AP008213.1\| Oryza sativa (japonica cultivar-group) genomic D...	424	e-115
4	dbj\|AP005309.5\| Oryza sativa (japonica cultivar-group) genomic D...	424	e-115
5	dbj\|AK101000.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	424	e-115
6	dbj\|AK070529.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	424	e-115
7	ref\|XM_463934.1\| Oryza sativa (japonica cultivar-group), mRNA	394	e-106
8	dbj\|AP008208.1\| Oryza sativa (japonica cultivar-group) genomic D...	394	e-106
9	dbj\|AP004885.3\| Oryza sativa (japonica cultivar-group) genomic D...	394	e-106
10	gb\|AY109680.1\| Zea mays CL17699_1 mRNA sequence	383	e-103
11	gb\|BT018635.1\| Zea mays clone EL01N0504B06.d mRNA sequence	353	4e-94
12	gb\|AC140549.12\| Medicago truncatula clone mth2-28o14, complete s...	50	0.007
13	gb\|AF106931.1\| Medicago truncatula putative translation initiati...	50	0.007
14	ref\|NM_113186.1\| Arabidopsis thaliana TIF3C2; translation initia...	46	0.11
15	emb\|CR932580.1\|CNS0KYBA Paramecium tetraurelia, Small GTPase rab...	46	0.11
16	gb\|AF106930.1\| Medicago truncatula putative translation initiati...	46	0.11
17	dbj\|AP001300.1\| Arabidopsis thaliana genomic DNA, chromosome 3, ...	46	0.11
18	gb\|AC152000.3\| Ornithorhynchus anatinus chromosome UNK clone OAB...	46	0.11
19	gb\|AC121837.2\| Mus musculus BAC clone RP24-74E24 from 5, complet...	42	1.7
20	gb\|AC122054.2\| Mus musculus BAC clone RP24-465D10 from 5, comple...	42	1.7
21	gb\|AC159001.2\| Mus musculus BAC clone RP24-221A23 from chromosom...	42	1.7
22	dbj\|AP008210.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	1.7
23	emb\|AL606603.3\|OSJN00040 Oryza sativa genomic DNA, chromosome 4,...	42	1.7
24	gb\|AC087579.17\| Homo sapiens chromosome 8, clone RP11-429B7, com...	42	1.7
25	gb\|AC012462.5\| Homo sapiens BAC clone RP11-566P21 from 2, comple...	42	1.7
26	emb\|AL442113.2\| Oryza sativa genomic DNA, chromosome 4, BAC clon...	42	1.7
27	emb\|AL663018.4\|OSJN00219 Oryza sativa genomic DNA, chromosome 4,...	42	1.7
28	emb\|CT025608.12\| Mouse DNA sequence from clone RP23-292F17 on ch...	42	1.7
29	ref\|NM_115473.2\| Arabidopsis thaliana EIF3C (EUKARYOTIC TRANSLAT...	40	6.9
30	gb\|AY494981.1\| Triticum turgidum A genome HMW glutenin A gene lo...	40	6.9
31	gb\|AY050484.1\| Prunus avium putative translation-initiation fact...	40	6.9
32	emb\|AJ560714.1\|RFE560714 Gracilariopsis longissima microsatellit...	40	6.9
33	emb\|AJ512806.1\|GLO512806 Gracilariopsis longissima microsatellit...	40	6.9
34	gb\|AC144502.5\| Medicago truncatula clone mth2-5p10, complete seq...	40	6.9
35	emb\|Z77249.2\|HS358H7 Human DNA sequence from clone RP3-358H7 on ...	40	6.9
36	emb\|AL136526.27\| Human DNA sequence from clone RP11-151A6 on chr...	40	6.9
37	emb\|AL136439.19\| Human DNA sequence from clone RP11-87C7 on chro...	40	6.9
38	gb\|AY064006.1\| Arabidopsis thaliana putative eukaryotic translat...	40	6.9
39	emb\|AL163763.1\|ATF18O21 Arabidopsis thaliana DNA chromosome 3, B...	40	6.9
40	emb\|CR361551.8\| Zebrafish DNA sequence from clone CH211-224M9 in...	40	6.9
41	gb\|AC083967.5\| Homo sapiens chromosome 8, clone RP11-865I6, comp...	40	6.9
42	gb\|AC090717.7\| Homo sapiens chromosome , clone GS1-112G24, compl...	40	6.9
43	gb\|AF040102.1\|AF040102 Arabidopsis thaliana eIF3c mRNA, complete...	40	6.9
44	gb\|AC008270.3\| Homo sapiens BAC clone RP11-111G16 from 2, comple...	40	6.9
45	gb\|AC100798.4\| Homo sapiens chromosome 8, clone RP11-600K15, com...	40	6.9
46	gb\|BT001961.1\| Arabidopsis thaliana clone U10766 putative eukary...	40	6.9

>ref|XM_506148.1| PREDICTED Oryza sativa (japonica cultivar-group), P0474G09.102 mRNA
          Length = 3214

 Score =  424 bits (214), Expect = e-115
 Identities = 412/478 (86%)
 Strand = Plus / Plus

                                                                        
Query: 29   aacattccgcaggcttcttgaaatgagtgagaggcagacttttgttggacctccagaaac 88
            ||||||||| ||||||||||| || |||||||||||||||||||| || || ||||||| 
Sbjct: 2162 aacattccgtaggcttcttgagatcagtgagaggcagacttttgtcgggccaccagaaaa 2221

                                                                        
Query: 89   ggtgagggatcatgtaatggctgccacgagggccctcaataagggtgaccatgaaaaggc 148
             |||||||| |||||||||||||| || || ||||||   ||||||||| |  | |||||
Sbjct: 2222 tgtgagggaccatgtaatggctgcaacaagagccctccgcaagggtgactaccagaaggc 2281

                                                                        
Query: 149  tttcagtgtcatcagttctctggatacctggaaacttttgaggaacaaggagcatatcct 208
            ||||  |||||| | ||| ||||| | |||||| ||||||||||||||||||||| | ||
Sbjct: 2282 tttcgatgtcattaattcgctggagatctggaagcttttgaggaacaaggagcatgttct 2341

                                                                        
Query: 209  tgagatgctgaagcttaaaatcaaggaagaggctcttagaacctatctcttctcttactc 268
            |||||||||||| ||||| ||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 2342 tgagatgctgaaacttaagatcaaagaagaagctcttagaacctatctcttgtcatactc 2401

                                                                        
Query: 269  gtcttgctatgagtccctgagccttgatcagctcactactatgtttgacctcagcgaggc 328
             |||||||| ||||||||||||||||| ||||||||||| ||||||||||| || |||  
Sbjct: 2402 ttcttgctacgagtccctgagccttgaccagctcactacaatgtttgaccttagtgagca 2461

                                                                        
Query: 329  acacgctcacagtgttgttagcaagatgatgatgcacgacgagcttcatgcaagctggga 388
            ||| ||||| ||  |||||||||||||||||||||| || ||||||||||| ||||||||
Sbjct: 2462 acaagctcatagcattgttagcaagatgatgatgcatgaagagcttcatgccagctggga 2521

                                                                        
Query: 389  ccagccaacaaagtgcattgtattccagaacgtggatcaaaccaggctgcagggactgat 448
             || ||||| ||||||||| | ||||| || || |||||||| ||||| ||||||||  |
Sbjct: 2522 tcaaccaaccaagtgcattattttccacaatgttgatcaaactaggcttcagggactact 2581

                                                                      
Query: 449  cttccagatgactgataggctctctgtccttgtggagagcaacgagagggcgtatgag 506
            |||||||||| |||||| |||||||||||||||||||||||| |||||||| ||||||
Sbjct: 2582 cttccagatgtctgataagctctctgtccttgtggagagcaatgagagggcatatgag 2639

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>ref|XM_476451.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3207

 Score =  424 bits (214), Expect = e-115
 Identities = 412/478 (86%)
 Strand = Plus / Plus

                                                                        
Query: 29   aacattccgcaggcttcttgaaatgagtgagaggcagacttttgttggacctccagaaac 88
            ||||||||| ||||||||||| || |||||||||||||||||||| || || ||||||| 
Sbjct: 2155 aacattccgtaggcttcttgagatcagtgagaggcagacttttgtcgggccaccagaaaa 2214

                                                                        
Query: 89   ggtgagggatcatgtaatggctgccacgagggccctcaataagggtgaccatgaaaaggc 148
             |||||||| |||||||||||||| || || ||||||   ||||||||| |  | |||||
Sbjct: 2215 tgtgagggaccatgtaatggctgcaacaagagccctccgcaagggtgactaccagaaggc 2274

                                                                        
Query: 149  tttcagtgtcatcagttctctggatacctggaaacttttgaggaacaaggagcatatcct 208
            ||||  |||||| | ||| ||||| | |||||| ||||||||||||||||||||| | ||
Sbjct: 2275 tttcgatgtcattaattcgctggagatctggaagcttttgaggaacaaggagcatgttct 2334

                                                                        
Query: 209  tgagatgctgaagcttaaaatcaaggaagaggctcttagaacctatctcttctcttactc 268
            |||||||||||| ||||| ||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 2335 tgagatgctgaaacttaagatcaaagaagaagctcttagaacctatctcttgtcatactc 2394

                                                                        
Query: 269  gtcttgctatgagtccctgagccttgatcagctcactactatgtttgacctcagcgaggc 328
             |||||||| ||||||||||||||||| ||||||||||| ||||||||||| || |||  
Sbjct: 2395 ttcttgctacgagtccctgagccttgaccagctcactacaatgtttgaccttagtgagca 2454

                                                                        
Query: 329  acacgctcacagtgttgttagcaagatgatgatgcacgacgagcttcatgcaagctggga 388
            ||| ||||| ||  |||||||||||||||||||||| || ||||||||||| ||||||||
Sbjct: 2455 acaagctcatagcattgttagcaagatgatgatgcatgaagagcttcatgccagctggga 2514

                                                                        
Query: 389  ccagccaacaaagtgcattgtattccagaacgtggatcaaaccaggctgcagggactgat 448
             || ||||| ||||||||| | ||||| || || |||||||| ||||| ||||||||  |
Sbjct: 2515 tcaaccaaccaagtgcattattttccacaatgttgatcaaactaggcttcagggactact 2574

                                                                      
Query: 449  cttccagatgactgataggctctctgtccttgtggagagcaacgagagggcgtatgag 506
            |||||||||| |||||| |||||||||||||||||||||||| |||||||| ||||||
Sbjct: 2575 cttccagatgtctgataagctctctgtccttgtggagagcaatgagagggcatatgag 2632

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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  424 bits (214), Expect = e-115
 Identities = 412/478 (86%)
 Strand = Plus / Plus

                                                                           
Query: 29      aacattccgcaggcttcttgaaatgagtgagaggcagacttttgttggacctccagaaac 88
               ||||||||| ||||||||||| || |||||||||||||||||||| || || ||||||| 
Sbjct: 1276665 aacattccgtaggcttcttgagatcagtgagaggcagacttttgtcgggccaccagaaaa 1276724

                                                                           
Query: 89      ggtgagggatcatgtaatggctgccacgagggccctcaataagggtgaccatgaaaaggc 148
                |||||||| |||||||||||||| || || ||||||   ||||||||| |  | |||||
Sbjct: 1276725 tgtgagggaccatgtaatggctgcaacaagagccctccgcaagggtgactaccagaaggc 1276784

                                                                           
Query: 149     tttcagtgtcatcagttctctggatacctggaaacttttgaggaacaaggagcatatcct 208
               ||||  |||||| | ||| ||||| | |||||| ||||||||||||||||||||| | ||
Sbjct: 1276785 tttcgatgtcattaattcgctggagatctggaagcttttgaggaacaaggagcatgttct 1276844

                                                                           
Query: 209     tgagatgctgaagcttaaaatcaaggaagaggctcttagaacctatctcttctcttactc 268
               |||||||||||| ||||| ||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 1276845 tgagatgctgaaacttaagatcaaagaagaagctcttagaacctatctcttgtcatactc 1276904

                                                                           
Query: 269     gtcttgctatgagtccctgagccttgatcagctcactactatgtttgacctcagcgaggc 328
                |||||||| ||||||||||||||||| ||||||||||| ||||||||||| || |||  
Sbjct: 1276905 ttcttgctacgagtccctgagccttgaccagctcactacaatgtttgaccttagtgagca 1276964

                                                                           
Query: 329     acacgctcacagtgttgttagcaagatgatgatgcacgacgagcttcatgcaagctggga 388
               ||| ||||| ||  |||||||||||||||||||||| || ||||||||||| ||||||||
Sbjct: 1276965 acaagctcatagcattgttagcaagatgatgatgcatgaagagcttcatgccagctggga 1277024

                                                                           
Query: 389     ccagccaacaaagtgcattgtattccagaacgtggatcaaaccaggctgcagggactgat 448
                || ||||| ||||||||| | ||||| || || |||||||| ||||| ||||||||  |
Sbjct: 1277025 tcaaccaaccaagtgcattattttccacaatgttgatcaaactaggcttcagggactact 1277084

                                                                         
Query: 449     cttccagatgactgataggctctctgtccttgtggagagcaacgagagggcgtatgag 506
               |||||||||| |||||| |||||||||||||||||||||||| |||||||| ||||||
Sbjct: 1277085 cttccagatgtctgataagctctctgtccttgtggagagcaatgagagggcatatgag 1277142

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>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0474G09
          Length = 169511

 Score =  424 bits (214), Expect = e-115
 Identities = 412/478 (86%)
 Strand = Plus / Plus

                                                                         
Query: 29    aacattccgcaggcttcttgaaatgagtgagaggcagacttttgttggacctccagaaac 88
             ||||||||| ||||||||||| || |||||||||||||||||||| || || ||||||| 
Sbjct: 41500 aacattccgtaggcttcttgagatcagtgagaggcagacttttgtcgggccaccagaaaa 41559

                                                                         
Query: 89    ggtgagggatcatgtaatggctgccacgagggccctcaataagggtgaccatgaaaaggc 148
              |||||||| |||||||||||||| || || ||||||   ||||||||| |  | |||||
Sbjct: 41560 tgtgagggaccatgtaatggctgcaacaagagccctccgcaagggtgactaccagaaggc 41619

                                                                         
Query: 149   tttcagtgtcatcagttctctggatacctggaaacttttgaggaacaaggagcatatcct 208
             ||||  |||||| | ||| ||||| | |||||| ||||||||||||||||||||| | ||
Sbjct: 41620 tttcgatgtcattaattcgctggagatctggaagcttttgaggaacaaggagcatgttct 41679

                                                                         
Query: 209   tgagatgctgaagcttaaaatcaaggaagaggctcttagaacctatctcttctcttactc 268
             |||||||||||| ||||| ||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 41680 tgagatgctgaaacttaagatcaaagaagaagctcttagaacctatctcttgtcatactc 41739

                                                                         
Query: 269   gtcttgctatgagtccctgagccttgatcagctcactactatgtttgacctcagcgaggc 328
              |||||||| ||||||||||||||||| ||||||||||| ||||||||||| || |||  
Sbjct: 41740 ttcttgctacgagtccctgagccttgaccagctcactacaatgtttgaccttagtgagca 41799

                                                                         
Query: 329   acacgctcacagtgttgttagcaagatgatgatgcacgacgagcttcatgcaagctggga 388
             ||| ||||| ||  |||||||||||||||||||||| || ||||||||||| ||||||||
Sbjct: 41800 acaagctcatagcattgttagcaagatgatgatgcatgaagagcttcatgccagctggga 41859

                                                                         
Query: 389   ccagccaacaaagtgcattgtattccagaacgtggatcaaaccaggctgcagggactgat 448
              || ||||| ||||||||| | ||||| || || |||||||| ||||| ||||||||  |
Sbjct: 41860 tcaaccaaccaagtgcattattttccacaatgttgatcaaactaggcttcagggactact 41919

                                                                       
Query: 449   cttccagatgactgataggctctctgtccttgtggagagcaacgagagggcgtatgag 506
             |||||||||| |||||| |||||||||||||||||||||||| |||||||| ||||||
Sbjct: 41920 cttccagatgtctgataagctctctgtccttgtggagagcaatgagagggcatatgag 41977

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>dbj|AK101000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147D18, full
            insert sequence
          Length = 3206

 Score =  424 bits (214), Expect = e-115
 Identities = 412/478 (86%)
 Strand = Plus / Plus

                                                                        
Query: 29   aacattccgcaggcttcttgaaatgagtgagaggcagacttttgttggacctccagaaac 88
            ||||||||| ||||||||||| || |||||||||||||||||||| || || ||||||| 
Sbjct: 2154 aacattccgtaggcttcttgagatcagtgagaggcagacttttgtcgggccaccagaaaa 2213

                                                                        
Query: 89   ggtgagggatcatgtaatggctgccacgagggccctcaataagggtgaccatgaaaaggc 148
             |||||||| |||||||||||||| || || ||||||   ||||||||| |  | |||||
Sbjct: 2214 tgtgagggaccatgtaatggctgcaacaagagccctccgcaagggtgactaccagaaggc 2273

                                                                        
Query: 149  tttcagtgtcatcagttctctggatacctggaaacttttgaggaacaaggagcatatcct 208
            ||||  |||||| | ||| ||||| | |||||| ||||||||||||||||||||| | ||
Sbjct: 2274 tttcgatgtcattaattcgctggagatctggaagcttttgaggaacaaggagcatgttct 2333

                                                                        
Query: 209  tgagatgctgaagcttaaaatcaaggaagaggctcttagaacctatctcttctcttactc 268
            |||||||||||| ||||| ||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 2334 tgagatgctgaaacttaagatcaaagaagaagctcttagaacctatctcttgtcatactc 2393

                                                                        
Query: 269  gtcttgctatgagtccctgagccttgatcagctcactactatgtttgacctcagcgaggc 328
             |||||||| ||||||||||||||||| ||||||||||| ||||||||||| || |||  
Sbjct: 2394 ttcttgctacgagtccctgagccttgaccagctcactacaatgtttgaccttagtgagca 2453

                                                                        
Query: 329  acacgctcacagtgttgttagcaagatgatgatgcacgacgagcttcatgcaagctggga 388
            ||| ||||| ||  |||||||||||||||||||||| || ||||||||||| ||||||||
Sbjct: 2454 acaagctcatagcattgttagcaagatgatgatgcatgaagagcttcatgccagctggga 2513

                                                                        
Query: 389  ccagccaacaaagtgcattgtattccagaacgtggatcaaaccaggctgcagggactgat 448
             || ||||| ||||||||| | ||||| || || |||||||| ||||| ||||||||  |
Sbjct: 2514 tcaaccaaccaagtgcattattttccacaatgttgatcaaactaggcttcagggactact 2573

                                                                      
Query: 449  cttccagatgactgataggctctctgtccttgtggagagcaacgagagggcgtatgag 506
            |||||||||| |||||| |||||||||||||||||||||||| |||||||| ||||||
Sbjct: 2574 cttccagatgtctgataagctctctgtccttgtggagagcaatgagagggcatatgag 2631

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>dbj|AK070529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060K11, full
            insert sequence
          Length = 3214

 Score =  424 bits (214), Expect = e-115
 Identities = 412/478 (86%)
 Strand = Plus / Plus

                                                                        
Query: 29   aacattccgcaggcttcttgaaatgagtgagaggcagacttttgttggacctccagaaac 88
            ||||||||| ||||||||||| || |||||||||||||||||||| || || ||||||| 
Sbjct: 2162 aacattccgtaggcttcttgagatcagtgagaggcagacttttgtcgggccaccagaaaa 2221

                                                                        
Query: 89   ggtgagggatcatgtaatggctgccacgagggccctcaataagggtgaccatgaaaaggc 148
             |||||||| |||||||||||||| || || ||||||   ||||||||| |  | |||||
Sbjct: 2222 tgtgagggaccatgtaatggctgcaacaagagccctccgcaagggtgactaccagaaggc 2281

                                                                        
Query: 149  tttcagtgtcatcagttctctggatacctggaaacttttgaggaacaaggagcatatcct 208
            ||||  |||||| | ||| ||||| | |||||| ||||||||||||||||||||| | ||
Sbjct: 2282 tttcgatgtcattaattcgctggagatctggaagcttttgaggaacaaggagcatgttct 2341

                                                                        
Query: 209  tgagatgctgaagcttaaaatcaaggaagaggctcttagaacctatctcttctcttactc 268
            |||||||||||| ||||| ||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 2342 tgagatgctgaaacttaagatcaaagaagaagctcttagaacctatctcttgtcatactc 2401

                                                                        
Query: 269  gtcttgctatgagtccctgagccttgatcagctcactactatgtttgacctcagcgaggc 328
             |||||||| ||||||||||||||||| ||||||||||| ||||||||||| || |||  
Sbjct: 2402 ttcttgctacgagtccctgagccttgaccagctcactacaatgtttgaccttagtgagca 2461

                                                                        
Query: 329  acacgctcacagtgttgttagcaagatgatgatgcacgacgagcttcatgcaagctggga 388
            ||| ||||| ||  |||||||||||||||||||||| || ||||||||||| ||||||||
Sbjct: 2462 acaagctcatagcattgttagcaagatgatgatgcatgaagagcttcatgccagctggga 2521

                                                                        
Query: 389  ccagccaacaaagtgcattgtattccagaacgtggatcaaaccaggctgcagggactgat 448
             || ||||| ||||||||| | ||||| || || |||||||| ||||| ||||||||  |
Sbjct: 2522 tcaaccaaccaagtgcattattttccacaatgttgatcaaactaggcttcagggactact 2581

                                                                      
Query: 449  cttccagatgactgataggctctctgtccttgtggagagcaacgagagggcgtatgag 506
            |||||||||| |||||| |||||||||||||||||||||||| |||||||| ||||||
Sbjct: 2582 cttccagatgtctgataagctctctgtccttgtggagagcaatgagagggcatatgag 2639

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>ref|XM_463934.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2784

 Score =  394 bits (199), Expect = e-106
 Identities = 403/471 (85%)
 Strand = Plus / Plus

                                                                        
Query: 29   aacattccgcaggcttcttgaaatgagtgagaggcagacttttgttggacctccagaaac 88
            |||||||||||||||||||||||| ||||||||||| |||||||| || || ||||||| 
Sbjct: 1995 aacattccgcaggcttcttgaaatcagtgagaggcaaacttttgtcgggccaccagaaaa 2054

                                                                        
Query: 89   ggtgagggatcatgtaatggctgccacgagggccctcaataagggtgaccatgaaaaggc 148
             |||||||| |||||||||||||| || ||||||||||  |||||||||||  | |||||
Sbjct: 2055 tgtgagggaccatgtaatggctgcgacaagggccctcagcaagggtgaccaccagaaggc 2114

                                                                        
Query: 149  tttcagtgtcatcagttctctggatacctggaaacttttgaggaacaaggagcatatcct 208
            ||||  |||||| | ||| ||||| | |||||| ||||||||||||||||||||| | ||
Sbjct: 2115 tttcgatgtcattaattcgctggagatctggaagcttttgaggaacaaggagcatgttct 2174

                                                                        
Query: 209  tgagatgctgaagcttaaaatcaaggaagaggctcttagaacctatctcttctcttactc 268
            |||||||||||| || || ||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 2175 tgagatgctgaaactcaagatcaaagaagaagctcttagaacctatctcttttcatactc 2234

                                                                        
Query: 269  gtcttgctatgagtccctgagccttgatcagctcactactatgtttgacctcagcgaggc 328
             ||||| ||  |||||||||||||||| |||||||| || ||||||||||| || |||  
Sbjct: 2235 ttcttgttaccagtccctgagccttgaccagctcacgacaatgtttgaccttagtgagca 2294

                                                                        
Query: 329  acacgctcacagtgttgttagcaagatgatgatgcacgacgagcttcatgcaagctggga 388
            ||| || |||||  |||||||||||||||||||||| || ||||||||||| ||||||||
Sbjct: 2295 acaagcgcacagcattgttagcaagatgatgatgcatgaggagcttcatgccagctggga 2354

                                                                        
Query: 389  ccagccaacaaagtgcattgtattccagaacgtggatcaaaccaggctgcagggactgat 448
             || || || ||||||||  | ||||| ||||| |||||||| || || ||||||||  |
Sbjct: 2355 tcaacctaccaagtgcatcattttccacaacgttgatcaaactagacttcagggactact 2414

                                                               
Query: 449  cttccagatgactgataggctctctgtccttgtggagagcaacgagagggc 499
            |||||||||| |||||| |||||| ||||||||||||||||| ||||||||
Sbjct: 2415 cttccagatggctgataagctctcagtccttgtggagagcaatgagagggc 2465

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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  394 bits (199), Expect = e-106
 Identities = 403/471 (85%)
 Strand = Plus / Plus

                                                                           
Query: 29      aacattccgcaggcttcttgaaatgagtgagaggcagacttttgttggacctccagaaac 88
               |||||||||||||||||||||||| ||||||||||| |||||||| || || ||||||| 
Sbjct: 1221921 aacattccgcaggcttcttgaaatcagtgagaggcaaacttttgtcgggccaccagaaaa 1221980

                                                                           
Query: 89      ggtgagggatcatgtaatggctgccacgagggccctcaataagggtgaccatgaaaaggc 148
                |||||||| |||||||||||||| || ||||||||||  |||||||||||  | |||||
Sbjct: 1221981 tgtgagggaccatgtaatggctgcgacaagggccctcagcaagggtgaccaccagaaggc 1222040

                                                                           
Query: 149     tttcagtgtcatcagttctctggatacctggaaacttttgaggaacaaggagcatatcct 208
               ||||  |||||| | ||| ||||| | |||||| ||||||||||||||||||||| | ||
Sbjct: 1222041 tttcgatgtcattaattcgctggagatctggaagcttttgaggaacaaggagcatgttct 1222100

                                                                           
Query: 209     tgagatgctgaagcttaaaatcaaggaagaggctcttagaacctatctcttctcttactc 268
               |||||||||||| || || ||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 1222101 tgagatgctgaaactcaagatcaaagaagaagctcttagaacctatctcttttcatactc 1222160

                                                                           
Query: 269     gtcttgctatgagtccctgagccttgatcagctcactactatgtttgacctcagcgaggc 328
                ||||| ||  |||||||||||||||| |||||||| || ||||||||||| || |||  
Sbjct: 1222161 ttcttgttaccagtccctgagccttgaccagctcacgacaatgtttgaccttagtgagca 1222220

                                                                           
Query: 329     acacgctcacagtgttgttagcaagatgatgatgcacgacgagcttcatgcaagctggga 388
               ||| || |||||  |||||||||||||||||||||| || ||||||||||| ||||||||
Sbjct: 1222221 acaagcgcacagcattgttagcaagatgatgatgcatgaggagcttcatgccagctggga 1222280

                                                                           
Query: 389     ccagccaacaaagtgcattgtattccagaacgtggatcaaaccaggctgcagggactgat 448
                || || || ||||||||  | ||||| ||||| |||||||| || || ||||||||  |
Sbjct: 1222281 tcaacctaccaagtgcatcattttccacaacgttgatcaaactagacttcagggactact 1222340

                                                                  
Query: 449     cttccagatgactgataggctctctgtccttgtggagagcaacgagagggc 499
               |||||||||| |||||| |||||| ||||||||||||||||| ||||||||
Sbjct: 1222341 cttccagatggctgataagctctcagtccttgtggagagcaatgagagggc 1222391

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>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0575F10
          Length = 150462

 Score =  394 bits (199), Expect = e-106
 Identities = 403/471 (85%)
 Strand = Plus / Plus

                                                                         
Query: 29    aacattccgcaggcttcttgaaatgagtgagaggcagacttttgttggacctccagaaac 88
             |||||||||||||||||||||||| ||||||||||| |||||||| || || ||||||| 
Sbjct: 53012 aacattccgcaggcttcttgaaatcagtgagaggcaaacttttgtcgggccaccagaaaa 53071

                                                                         
Query: 89    ggtgagggatcatgtaatggctgccacgagggccctcaataagggtgaccatgaaaaggc 148
              |||||||| |||||||||||||| || ||||||||||  |||||||||||  | |||||
Sbjct: 53072 tgtgagggaccatgtaatggctgcgacaagggccctcagcaagggtgaccaccagaaggc 53131

                                                                         
Query: 149   tttcagtgtcatcagttctctggatacctggaaacttttgaggaacaaggagcatatcct 208
             ||||  |||||| | ||| ||||| | |||||| ||||||||||||||||||||| | ||
Sbjct: 53132 tttcgatgtcattaattcgctggagatctggaagcttttgaggaacaaggagcatgttct 53191

                                                                         
Query: 209   tgagatgctgaagcttaaaatcaaggaagaggctcttagaacctatctcttctcttactc 268
             |||||||||||| || || ||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 53192 tgagatgctgaaactcaagatcaaagaagaagctcttagaacctatctcttttcatactc 53251

                                                                         
Query: 269   gtcttgctatgagtccctgagccttgatcagctcactactatgtttgacctcagcgaggc 328
              ||||| ||  |||||||||||||||| |||||||| || ||||||||||| || |||  
Sbjct: 53252 ttcttgttaccagtccctgagccttgaccagctcacgacaatgtttgaccttagtgagca 53311

                                                                         
Query: 329   acacgctcacagtgttgttagcaagatgatgatgcacgacgagcttcatgcaagctggga 388
             ||| || |||||  |||||||||||||||||||||| || ||||||||||| ||||||||
Sbjct: 53312 acaagcgcacagcattgttagcaagatgatgatgcatgaggagcttcatgccagctggga 53371

                                                                         
Query: 389   ccagccaacaaagtgcattgtattccagaacgtggatcaaaccaggctgcagggactgat 448
              || || || ||||||||  | ||||| ||||| |||||||| || || ||||||||  |
Sbjct: 53372 tcaacctaccaagtgcatcattttccacaacgttgatcaaactagacttcagggactact 53431

                                                                
Query: 449   cttccagatgactgataggctctctgtccttgtggagagcaacgagagggc 499
             |||||||||| |||||| |||||| ||||||||||||||||| ||||||||
Sbjct: 53432 cttccagatggctgataagctctcagtccttgtggagagcaatgagagggc 53482

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>gb|AY109680.1| Zea mays CL17699_1 mRNA sequence
          Length = 1483

 Score =  383 bits (193), Expect = e-103
 Identities = 419/493 (84%), Gaps = 1/493 (0%)
 Strand = Plus / Plus

                                                                       
Query: 7   caagcggaggcctatgagncaaaacattccgcaggcttcttgaaatgagtgagaggcaga 66
           ||||||||| |||||||| |||||||||||| |||||||||||| ||||||| |||||||
Sbjct: 380 caagcggagacctatgag-caaaacattccgaaggcttcttgaagtgagtgaaaggcaga 438

                                                                       
Query: 67  cttttgttggacctccagaaacggtgagggatcatgtaatggctgccacgagggccctca 126
           | |||||||| || || || |  |||||||| ||||||||||||||||| || |||||||
Sbjct: 439 catttgttgggccgcccgagaatgtgagggaccatgtaatggctgccacaagagccctca 498

                                                                       
Query: 127 ataagggtgaccatgaaaaggctttcagtgtcatcagttctctggatacctggaaacttt 186
           | |||||||| ||  ||||||||||||||||||| | |||  |||| |  ||||| ||||
Sbjct: 499 acaagggtgatcaccaaaaggctttcagtgtcataaattcgttggagatttggaagcttt 558

                                                                       
Query: 187 tgaggaacaaggagcatatccttgagatgctgaagcttaaaatcaaggaagaggctctta 246
           |||||||||  |||||| | ||||||||| |||||||||| |||||||| || |||||||
Sbjct: 559 tgaggaacagagagcatgttcttgagatgttgaagcttaagatcaaggaggaagctctta 618

                                                                       
Query: 247 gaacctatctcttctcttactcgtcttgctatgagtccctgagccttgatcagctcacta 306
           ||||||||||||| || ||||||||||  || || ||| | |||||| | ||||||||||
Sbjct: 619 gaacctatctcttttcatactcgtcttcgtacgaatccttaagccttaaccagctcacta 678

                                                                       
Query: 307 ctatgtttgacctcagcgaggcacacgctcacagtgttgttagcaagatgatgatgcacg 366
           | |||||||| |||||||||   || || |||||  |||||||||||||||||||||| |
Sbjct: 679 ccatgtttgatctcagcgagcagcatgcccacagcattgttagcaagatgatgatgcatg 738

                                                                       
Query: 367 acgagcttcatgcaagctgggaccagccaacaaagtgcattgtattccagaacgtggatc 426
           | ||||||||||| |||||||||||||||||||||||||| |||||||| |  ||||| |
Sbjct: 739 aagagcttcatgctagctgggaccagccaacaaagtgcatcgtattccatagtgtggacc 798

                                                                       
Query: 427 aaaccaggctgcagggactgatcttccagatgactgataggctctctgtccttgtggaga 486
           |||| ||||| ||||| ||  ||||||||||| | |||| |||||| ||||| |||||||
Sbjct: 799 aaactaggcttcaggggctactcttccagatggcagataagctctcggtcctggtggaga 858

                        
Query: 487 gcaacgagagggc 499
            ||| ||||||||
Sbjct: 859 tcaatgagagggc 871

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>gb|BT018635.1| Zea mays clone EL01N0504B06.d mRNA sequence
          Length = 1657

 Score =  353 bits (178), Expect = 4e-94
 Identities = 418/494 (84%), Gaps = 3/494 (0%)
 Strand = Plus / Plus

                                                                        
Query: 7    caagcggaggcctatgagncaaaacattccgcaggcttcttgaaatgagtgagaggcaga 66
            ||||||| | |||||||| |||||||||||| |||||||||||| ||||||| |||||||
Sbjct: 575  caagcggcgacctatgag-caaaacattccgaaggcttcttgaagtgagtgaaaggcaga 633

                                                                        
Query: 67   cttttgttggacctccagaaacggtgagggatcatgtaatggctgccacgagggccctca 126
            | |||||||| || || || |  |||||||| ||||||||||||||||| || |||||||
Sbjct: 634  catttgttgggccgcccgagaatgtgagggaccatgtaatggctgccacaagagccctca 693

                                                                        
Query: 127  ataagggtgaccatgaaaaggctttcagtgtcatcagttctctggatacctggaaacttt 186
            | |||||||| ||  ||||||||||||||||||| | |||  |||| |  ||||| ||||
Sbjct: 694  acaagggtgatcaccaaaaggctttcagtgtcataaattcgttggagatttggaagcttt 753

                                                                        
Query: 187  tgaggaacaaggagcatatccttgagatgctgaagcttaaaatcaaggaag-aggctctt 245
            |||||||||  |||||| ||||||||||| |||||||||| ||||||| || | ||||||
Sbjct: 754  tgaggaacagagagcatgtccttgagatgttgaagcttaagatcaagggaggaagctctt 813

                                                                        
Query: 246  agaacctatctcttctcttactcgtcttgctatgagtccctgagccttgatcagctcact 305
            |||||||||||||| || ||||||||||  || |||||| | |||||| | |||||||||
Sbjct: 814  agaacctatctcttttcatactcgtcttcgtacgagtccttaagcctt-accagctcact 872

                                                                        
Query: 306  actatgtttgacctcagcgaggcacacgctcacagtgttgttagcaagatgatgatgcac 365
            || |||||||| |||||||||   || || |||||  |||||||||||||||||||||| 
Sbjct: 873  accatgtttgatctcagcgagcagcatgcccacagcattgttagcaagatgatgatgcat 932

                                                                        
Query: 366  gacgagcttcatgcaagctgggaccagccaacaaagtgcattgtattccagaacgtggat 425
             |  |||||||||| |||||||||||||||||||||||||| |||||||| |  ||||| 
Sbjct: 933  caatagcttcatgctagctgggaccagccaacaaagtgcatcgtattccatagtgtggac 992

                                                                        
Query: 426  caaaccaggctgcagggactgatcttccagatgactgataggctctctgtccttgtggag 485
            ||||| ||||| ||||| ||  ||||||||||| | |||| |||||| ||||| ||||||
Sbjct: 993  caaactaggcttcaggggctactcttccagatggcagataagctctcggtcctggtggag 1052

                          
Query: 486  agcaacgagagggc 499
            | ||| ||||||||
Sbjct: 1053 atcaatgagagggc 1066

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>gb|AC140549.12| Medicago truncatula clone mth2-28o14, complete sequence
          Length = 139778

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 369   gagcttcatgcaagctgggaccagccaac 397
             |||||||||||||||||||| ||||||||
Sbjct: 24365 gagcttcatgcaagctgggatcagccaac 24393



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                        
Query: 78    cctccagaaacggtgagggatcatgtaatggctgccacgaggg 120
             ||||| ||||| || ||||||||||| ||||||||||| ||||
Sbjct: 24074 cctcctgaaactgtcagggatcatgttatggctgccacaaggg 24116

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>gb|AF106931.1| Medicago truncatula putative translation initiation protein (AM3-2)
           mRNA, complete cds
          Length = 1395

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 369 gagcttcatgcaagctgggaccagccaac 397
           |||||||||||||||||||| ||||||||
Sbjct: 680 gagcttcatgcaagctgggatcagccaac 708



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 78  cctccagaaacggtgagggatcatgtaatggctgccacgaggg 120
           ||||| ||||| || ||||||||||| ||||||||||| ||||
Sbjct: 389 cctcctgaaactgtcagggatcatgttatggctgccacaaggg 431

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>ref|NM_113186.1| Arabidopsis thaliana TIF3C2; translation initiation factor AT3G22860
            (TIF3C2) mRNA, complete cds
          Length = 2403

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                   
Query: 343  ttgttagcaagatgatgatgcacgacgagcttcatgcaagctgggaccagccaac 397
            |||| ||||||||||||||  || | |||||| ||||||  ||||||||||||||
Sbjct: 2105 ttgtgagcaagatgatgatcaacaaggagcttaatgcaacatgggaccagccaac 2159

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>emb|CR932580.1|CNS0KYBA Paramecium tetraurelia, Small GTPase rab, putative, complete gene
          Length = 3001

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 258  ttctcttactcgtcttgctatga 280
            |||||||||||||||||||||||
Sbjct: 2472 ttctcttactcgtcttgctatga 2494

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>gb|AF106930.1| Medicago truncatula putative translation initiation protein (AM3-1)
            mRNA, complete cds
          Length = 3199

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 78   cctccagaaacggtgagggatcatgtaatggctgccacgaggg 120
            ||||| ||||| || ||||||||||| ||||||||||| ||||
Sbjct: 2278 cctcctgaaactgtcagggatcatgttatggctgccacaaggg 2320



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 369  gagcttcatgcaagctgggaccagccaac 397
            |||||||||||||||||||| || |||||
Sbjct: 2569 gagcttcatgcaagctgggatcaaccaac 2597

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>dbj|AP001300.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F5N5
          Length = 71327

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                   
Query: 343  ttgttagcaagatgatgatgcacgacgagcttcatgcaagctgggaccagccaac 397
            |||| ||||||||||||||  || | |||||| ||||||  ||||||||||||||
Sbjct: 2893 ttgtgagcaagatgatgatcaacaaggagcttaatgcaacatgggaccagccaac 2839

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>gb|AC152000.3| Ornithorhynchus anatinus chromosome UNK clone OABb-501A1, complete
              sequence
          Length = 149165

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 242    tcttagaacctatctcttctcttactc 268
              ||||||| |||||||||||||||||||
Sbjct: 106615 tcttagatcctatctcttctcttactc 106641

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>gb|AC121837.2| Mus musculus BAC clone RP24-74E24 from 5, complete sequence
          Length = 179290

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 62   gcagacttttgttggacctccagaa 86
            ||||||||||| |||||||||||||
Sbjct: 4768 gcagacttttggtggacctccagaa 4744

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>gb|AC122054.2| Mus musculus BAC clone RP24-465D10 from 5, complete sequence
          Length = 128158

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 62    gcagacttttgttggacctccagaa 86
             ||||||||||| |||||||||||||
Sbjct: 39725 gcagacttttggtggacctccagaa 39701

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>gb|AC159001.2| Mus musculus BAC clone RP24-221A23 from chromosome 9, complete sequence
          Length = 161507

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 442    gactgatcttccagatgactg 462
              |||||||||||||||||||||
Sbjct: 129553 gactgatcttccagatgactg 129533

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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 340     gtgttgttagcaagatgatgatgca 364
               |||||||||||||||||| ||||||
Sbjct: 5895092 gtgttgttagcaagatgaggatgca 5895068



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 46      ttgaaatgagtgagaggcaga 66
               |||||||||||||||||||||
Sbjct: 4343626 ttgaaatgagtgagaggcaga 4343646

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>emb|AL606603.3|OSJN00040 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050N09,
             complete sequence
          Length = 127117

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 46    ttgaaatgagtgagaggcaga 66
             |||||||||||||||||||||
Sbjct: 91494 ttgaaatgagtgagaggcaga 91514

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>gb|AC087579.17| Homo sapiens chromosome 8, clone RP11-429B7, complete sequence
          Length = 122553

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 344   tgttagcaagatgatgatgca 364
             |||||||||||||||||||||
Sbjct: 90036 tgttagcaagatgatgatgca 90056

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>gb|AC012462.5| Homo sapiens BAC clone RP11-566P21 from 2, complete sequence
          Length = 143947

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 68    ttttgttggacctccagaaac 88
             |||||||||||||||||||||
Sbjct: 34075 ttttgttggacctccagaaac 34055

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>emb|AL442113.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0806H05, complete
             sequence
          Length = 102515

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 46    ttgaaatgagtgagaggcaga 66
             |||||||||||||||||||||
Sbjct: 11381 ttgaaatgagtgagaggcaga 11401

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>emb|AL663018.4|OSJN00219 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0045O17,
             complete sequence
          Length = 137981

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 340   gtgttgttagcaagatgatgatgca 364
             |||||||||||||||||| ||||||
Sbjct: 38329 gtgttgttagcaagatgaggatgca 38305

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>emb|CT025608.12| Mouse DNA sequence from clone RP23-292F17 on chromosome 9, complete
              sequence
          Length = 200204

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 442    gactgatcttccagatgactg 462
              |||||||||||||||||||||
Sbjct: 182483 gactgatcttccagatgactg 182503

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>ref|NM_115473.2| Arabidopsis thaliana EIF3C (EUKARYOTIC TRANSLATION INITIATION FACTOR
            3) AT3G56150 (EIF3C) mRNA, complete cds
          Length = 3033

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                            
Query: 351  aagatgatgatgcacgacgagcttcatgcaagctgggaccagccaaca 398
            |||||||||||  | || || || |||||||||||||| |||||||||
Sbjct: 2375 aagatgatgattaatgaggaactgcatgcaagctgggatcagccaaca 2422

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>gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene locus, sequence
          Length = 307015

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 100    atgtaatggctgccacgagg 119
              ||||||||||||||||||||
Sbjct: 256326 atgtaatggctgccacgagg 256307

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>gb|AY050484.1| Prunus avium putative translation-initiation factor 3 subunit mRNA,
            complete cds
          Length = 3114

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                    
Query: 343  ttgttagcaagatgatgatgcacgacgagcttcatgcaagctgggaccagccaaca 398
            ||||||||||||||||| |  | || |||||   |||||| |||||||||||||||
Sbjct: 2452 ttgttagcaagatgatggtcaatgaagagctctttgcaagttgggaccagccaaca 2507

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>emb|AJ560714.1|RFE560714 Gracilariopsis longissima microsatellite DNA, clone D10C07(F)
          Length = 332

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 184 ttttgaggaacaaggagcatatcc 207
           |||||| |||||||||||||||||
Sbjct: 284 ttttgaagaacaaggagcatatcc 261

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>emb|AJ512806.1|GLO512806 Gracilariopsis longissima microsatellite DNA, clone SWD10B09
          Length = 334

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 184 ttttgaggaacaaggagcatatcc 207
           |||||| |||||||||||||||||
Sbjct: 286 ttttgaagaacaaggagcatatcc 263

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>gb|AC144502.5| Medicago truncatula clone mth2-5p10, complete sequence
          Length = 91507

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   gcttaaaatcaaggaagagg 240
             ||||||||||||||||||||
Sbjct: 61428 gcttaaaatcaaggaagagg 61409

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>emb|Z77249.2|HS358H7 Human DNA sequence from clone RP3-358H7 on chromosome X Contains a
              DEAD-box protein pseudogene and the gene for a novel
              E2F-like protein (LOC51270), complete sequence
          Length = 148864

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 434    gctgcagggactgatcttcc 453
              ||||||||||||||||||||
Sbjct: 122725 gctgcagggactgatcttcc 122744

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>emb|AL136526.27| Human DNA sequence from clone RP11-151A6 on chromosome 13q32.21-33.3
              Contains the 3' end of the PCCA gene for propionyl Coenzyme
              A carboxylase alpha polypeptide, the 3' end of a novel
              gene, a novel gene for a protein similar to ribosomal
              protein 26, the 3' end of a novel gene, a novel gene and a
              CpG island, complete sequence
          Length = 179804

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    cttttgaggaacaaggagca 202
              ||||||||||||||||||||
Sbjct: 118308 cttttgaggaacaaggagca 118289

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>emb|AL136439.19| Human DNA sequence from clone RP11-87C7 on chromosome 13q21.2-22.1
            Contains the gene for RNA polymerase I 16 kDa subunit
            (LOC51082), a nucleophosmin (nucleolar phosphoprotein
            B23, numatrin) (Nucleophosmin 1 (nucleolar phosphoprotein
            B23, numatrin)) (NPM1) pseudogene and a CpG island,
            complete sequence
          Length = 112204

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 241  ctcttagaacctatctcttc 260
            ||||||||||||||||||||
Sbjct: 4862 ctcttagaacctatctcttc 4881

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>gb|AY064006.1| Arabidopsis thaliana putative eukaryotic translation initiation
            factor 3 subunit 8 (At3g56150) mRNA, complete cds
          Length = 3012

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                            
Query: 351  aagatgatgatgcacgacgagcttcatgcaagctgggaccagccaaca 398
            |||||||||||  | || || || |||||||||||||| |||||||||
Sbjct: 2374 aagatgatgattaatgaggaactgcatgcaagctgggatcagccaaca 2421

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>emb|AL163763.1|ATF18O21 Arabidopsis thaliana DNA chromosome 3, BAC clone F18O21
          Length = 99492

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 375   catgcaagctgggaccagccaaca 398
             |||||||||||||| |||||||||
Sbjct: 37158 catgcaagctgggatcagccaaca 37135

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>emb|CR361551.8| Zebrafish DNA sequence from clone CH211-224M9 in linkage group 1,
              complete sequence
          Length = 177606

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 398    aaagtgcattgtattccaga 417
              ||||||||||||||||||||
Sbjct: 136718 aaagtgcattgtattccaga 136699

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>gb|AC083967.5| Homo sapiens chromosome 8, clone RP11-865I6, complete sequence
          Length = 170241

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   tgctgaagcttaaaatcaag 233
             ||||||||||||||||||||
Sbjct: 56278 tgctgaagcttaaaatcaag 56259

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>gb|AC090717.7| Homo sapiens chromosome , clone GS1-112G24, complete sequence
          Length = 123022

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   tgctgaagcttaaaatcaag 233
             ||||||||||||||||||||
Sbjct: 54437 tgctgaagcttaaaatcaag 54456

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>gb|AF040102.1|AF040102 Arabidopsis thaliana eIF3c mRNA, complete cds
          Length = 2924

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                            
Query: 351  aagatgatgatgcacgacgagcttcatgcaagctgggaccagccaaca 398
            |||||||||||  | || || || |||||||||||||| |||||||||
Sbjct: 2332 aagatgatgattaatgaggaactgcatgcaagctgggatcagccaaca 2379

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>gb|AC008270.3| Homo sapiens BAC clone RP11-111G16 from 2, complete sequence
          Length = 167733

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   agcttaaaatcaaggaagag 239
             ||||||||||||||||||||
Sbjct: 81862 agcttaaaatcaaggaagag 81843

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>gb|AC100798.4| Homo sapiens chromosome 8, clone RP11-600K15, complete sequence
          Length = 167799

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 214    tgctgaagcttaaaatcaag 233
              ||||||||||||||||||||
Sbjct: 137521 tgctgaagcttaaaatcaag 137502

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>gb|BT001961.1| Arabidopsis thaliana clone U10766 putative eukaryotic translation
            initiation factor 3 subunit 8 (At3g56150) mRNA, complete
            cds
          Length = 2734

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                            
Query: 351  aagatgatgatgcacgacgagcttcatgcaagctgggaccagccaaca 398
            |||||||||||  | || || || |||||||||||||| |||||||||
Sbjct: 2251 aagatgatgattaatgaggaactgcatgcaagctgggatcagccaaca 2298


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,258,911
Number of Sequences: 3902068
Number of extensions: 4258911
Number of successful extensions: 76831
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 76682
Number of HSP's gapped (non-prelim): 144
length of query: 506
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 484
effective length of database: 17,147,199,772
effective search space: 8299244689648
effective search space used: 8299244689648
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result