ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags20b11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF262215.1| Oryza sativa guanine nucleotide-exchange protein ... 676 0.0
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 357 3e-95
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 357 3e-95
4gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare str... 357 3e-95
5dbj|AK119229.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 2e-22
6dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 56 2e-04
7dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic D... 56 2e-04
8dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic D... 56 2e-04
9dbj|AK106454.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 2e-04
10gb|AC020622.3|F22M8 Sequence of BAC F22M8 from Arabidopsis thali... 46 0.15
11ref|NM_100076.2| Arabidopsis thaliana guanyl-nucleotide exchange... 44 0.58
12gb|BC044280.1| Xenopus laevis, Similar to hypothetical protein L... 44 0.58
13gb|BC072899.1| Xenopus laevis MGC80346 protein, mRNA (cDNA clone... 42 2.3
14gb|AC164972.2| Mus musculus BAC clone RP23-143M15 from chromosom... 42 2.3
15emb|Z78419.1|CEF26A3 Caenorhabditis elegans Cosmid F26A3, comple... 42 2.3
16gb|AC113081.8| Mus musculus chromosome 9, clone RP23-291B23, com... 42 2.3
17emb|AL359272.9| Human DNA sequence from clone RP11-554P16 on chr... 42 2.3
18emb|AL663035.8| Mouse DNA sequence from clone RP23-432G17 on chr... 42 2.3
19gb|AC157512.3| Mus musculus BAC clone RP24-399L6 from chromosome... 42 2.3
20gb|AF411808.1| Lycopersicon esculentum BAC clone Clemson_Id 62O1... 42 2.3
21gb|AC154190.2| Mus musculus BAC clone RP24-465P16 from chromosom... 42 2.3
22ref|NM_059733.1| Caenorhabditis elegans F26A3.5 (F26A3.5) mRNA, ... 42 2.3
23gb|AC087773.1|AC087773 Genomic Sequence For Lycopersicon esculen... 42 2.3
24gb|AC084652.1|CBRG45O11 Caenorhabditis briggsae cosmid G45O11, c... 42 2.3
25emb|BX855607.2| Mouse DNA sequence from clone RP24-562D24 on chr... 42 2.3
26emb|BX119960.5| Mouse DNA sequence from clone RP23-223O17 on chr... 42 2.3
27emb|CT025567.10| Mouse DNA sequence from clone RP23-302A9 on chr... 42 2.3
28ref|NM_115950.2| Arabidopsis thaliana guanyl-nucleotide exchange... 40 9.1
29gb|U80022.2| Caenorhabditis elegans cosmid F12F3, complete sequence 40 9.1
30gb|AC147312.3| Pan troglodytes BAC clone RP43-50K12 from 7, comp... 40 9.1
31gb|AY069990.1| Arthrobacter sp. BT801 hydantoin racemase HyuA (h... 40 9.1
32gb|AC139853.17| Medicago truncatula clone mth2-13d20, complete s... 40 9.1
33emb|AL450265.11| Human DNA sequence from clone RP11-477A7 on chr... 40 9.1
34emb|AL022164.1|HS581F7 Human DNA sequence from clone RP4-581F7 o... 40 9.1
35gb|AC012308.12| Homo sapiens chromosome 10 clone RP11-5G18, comp... 40 9.1
36emb|AJ627183.1| Nicotiana tabacum xylt gene for putative beta-(1... 40 9.1
37gb|AC023283.10| Homo sapiens chromosome 10 clone RP11-539I5, com... 40 9.1
38gb|AC092783.2| Homo sapiens chromosome 1 clone RP5-827O9, comple... 40 9.1
39gb|AC092019.2| Homo sapiens chromosome 1 clone RP5-1174I8, compl... 40 9.1
40gb|AC010364.6| Homo sapiens chromosome 5 clone CTD-2042D5, compl... 40 9.1
41gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 40 9.1
42dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
43gb|AC084048.5| Homo sapiens BAC clone RP11-61G19 from 4, complet... 40 9.1
44gb|AC010450.6|AC010450 Homo sapiens chromosome 5 clone CTD-2242D... 40 9.1
45gb|AC008747.5|AC008747 Homo sapiens chromosome 19 clone CTD-2588... 40 9.1
46dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
47gb|AC012063.7| Homo sapiens BAC clone RP11-116F11 from 2, comple... 40 9.1
48gb|AC114480.2| Homo sapiens chromosome 3 clone RP11-755B10, comp... 40 9.1
49gb|AC092418.3| Homo sapiens chromosome 3 clone RP11-229A12, comp... 40 9.1
50gb|AC006406.1|AC006406 Homo sapiens, clone hRPK.25_A_1, complete... 40 9.1
51emb|CT574563.2| Pan troglodytes chromosome X clone CH251-7J11 ma... 40 9.1
52emb|AL162295.1|ATT4C21 Arabidopsis thaliana DNA chromosome 3, BA... 40 9.1
53gb|AC163671.5| Mus musculus BAC clone RP23-21K2 from chromosome ... 40 9.1
54emb|AL683803.9| Mouse DNA sequence from clone RP23-448D15 on chr... 40 9.1
55gb|AY130758.1| Caenorhabditis elegans titin locus, complete sequ... 40 9.1 
>gb|AF262215.1| Oryza sativa guanine nucleotide-exchange protein GEP2 (GEP2) mRNA,
            partial cds
          Length = 5678

 Score =  676 bits (341), Expect = 0.0
 Identities = 543/609 (89%), Gaps = 6/609 (0%)
 Strand = Plus / Plus

                                                                        
Query: 26   aattatcgaaaagattttgcgagattatttcccctacattaccgagactgagtcttcaac 85
            ||||||||| ||||||||||| || || || ||||||||||| ||||| |||||  ||||
Sbjct: 3787 aattatcgagaagattttgcgggagtactttccctacattactgagaccgagtcgacaac 3846

                                                                        
Query: 86   tttcactgattgtgtgaactgtcttattgcgttcaccaacagtaggtttaacaaggatat 145
            |||||||||||||||||||||||||||||| || || |||||||||||||||||||||||
Sbjct: 3847 tttcactgattgtgtgaactgtcttattgcatttactaacagtaggtttaacaaggatat 3906

                                                                        
Query: 146  aagccttaatgcaattggttttcttcgattctgtgcggcaaagctggcagaaggtgacat 205
            |||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 3907 aagcctcaatgcaattggttttcttcgattctgtgcggcaaagctagcggaaggtgacat 3966

                                                                        
Query: 206  cgggtcctcttcaaggctgaagga--accctcgt----ctcatttgaccaaagatggaaa 259
             || |||||||||||| |||||||  | |||| |    |||  |||||||| ||||||||
Sbjct: 3967 tggatcctcttcaaggttgaaggagaatcctccttctcctcgcttgaccaaggatggaaa 4026

                                                                        
Query: 260  gcaggaaggtgcaattcaggttgataaggatgatactatacacttctggtttcctttatt 319
            ||||||| ||||| |||  |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 4027 gcaggaaagtgcagttcttgttgataaggatgatactatacacttttggtttcctttatt 4086

                                                                        
Query: 320  agcaggattgtctgaacttactttcgaccttagaccagaaattaggaaaagttccttgca 379
            ||||||||| ||||||||||| ||||||||  |||| ||||| ||||||||| |||||||
Sbjct: 4087 agcaggattatctgaacttaccttcgacctacgacctgaaatcaggaaaagtgccttgca 4146

                                                                        
Query: 380  ggtgttatttgacacattaagaaaccatggccatcttttctctcttcctttgtgggagaa 439
            |||||||||||||||||||||||||||||| ||||| |||||  | ||||||||||||||
Sbjct: 4147 ggtgttatttgacacattaagaaaccatggtcatctcttctccttgcctttgtgggagaa 4206

                                                                        
Query: 440  ggtgtttgattcagtacttttcccaatatttgattatgtacggcatgctatcgatccatc 499
            ||||||||||||||| |||||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 4207 ggtgtttgattcagtgcttttcccaatatttgattacgtacggcatgccattgatccatc 4266

                                                                        
Query: 500  tggtggttcttcacaaggacaaaatgcggaaaatgatcctgcagagcttgatcaagatgc 559
              |||||||| |||||||||| |||| ||||| ||||||| |||| ||||||||||||||
Sbjct: 4267 aagtggttctccacaaggacagaatgtggaaagtgatccttcagaacttgatcaagatgc 4326

                                                                        
Query: 560  ttggatgtacgaaacgtgcactttggcccttcagctagttgtagaccttttcgtcaagtt 619
             ||||||||||| || |||||||||||||| ||||||||||| ||||| || || |||||
Sbjct: 4327 atggatgtacgagacatgcactttggccctgcagctagttgtggacctctttgttaagtt 4386

                     
Query: 620  ctatgacac 628
            |||||||||
Sbjct: 4387 ctatgacac 4395
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  357 bits (180), Expect = 3e-95
 Identities = 276/308 (89%)
 Strand = Plus / Minus

                                                                           
Query: 321     gcaggattgtctgaacttactttcgaccttagaccagaaattaggaaaagttccttgcag 380
               |||||||| ||||||||||| ||||||||  |||| ||||| ||||||||| ||||||||
Sbjct: 7726348 gcaggattatctgaacttaccttcgacctacgacctgaaatcaggaaaagtgccttgcag 7726289

                                                                           
Query: 381     gtgttatttgacacattaagaaaccatggccatcttttctctcttcctttgtgggagaag 440
               ||||||||||||||||||||||||||||| ||||| |||||  | |||||||||||||||
Sbjct: 7726288 gtgttatttgacacattaagaaaccatggtcatctcttctccttgcctttgtgggagaag 7726229

                                                                           
Query: 441     gtgtttgattcagtacttttcccaatatttgattatgtacggcatgctatcgatccatct 500
               |||||||||||||| |||||||||||||||||||| ||||||||||| || |||||||| 
Sbjct: 7726228 gtgtttgattcagtgcttttcccaatatttgattacgtacggcatgccattgatccatca 7726169

                                                                           
Query: 501     ggtggttcttcacaaggacaaaatgcggaaaatgatcctgcagagcttgatcaagatgct 560
                |||||||| |||||||||| |||| ||||| ||||||| |||| |||||||||||||| 
Sbjct: 7726168 agtggttctccacaaggacagaatgtggaaagtgatccttcagaacttgatcaagatgca 7726109

                                                                           
Query: 561     tggatgtacgaaacgtgcactttggcccttcagctagttgtagaccttttcgtcaagttc 620
               ||||||||||| || |||||||||||||| ||||||||||| ||||| || || ||||||
Sbjct: 7726108 tggatgtacgagacatgcactttggccctgcagctagttgtggacctctttgttaagttc 7726049

                       
Query: 621     tatgacac 628
               ||||||||
Sbjct: 7726048 tatgacac 7726041



 Score =  329 bits (166), Expect = 7e-87
 Identities = 272/306 (88%), Gaps = 6/306 (1%)
 Strand = Plus / Minus

                                                                           
Query: 26      aattatcgaaaagattttgcgagattatttcccctacattaccgagactgagtcttcaac 85
               ||||||||| ||||||||||| || || || ||||||||||| ||||| |||||  ||||
Sbjct: 7726750 aattatcgagaagattttgcgggagtactttccctacattactgagaccgagtcgacaac 7726691

                                                                           
Query: 86      tttcactgattgtgtgaactgtcttattgcgttcaccaacagtaggtttaacaaggatat 145
               |||||||||||||||||||||||||||||| || || |||||||||||||||||||||||
Sbjct: 7726690 tttcactgattgtgtgaactgtcttattgcatttactaacagtaggtttaacaaggatat 7726631

                                                                           
Query: 146     aagccttaatgcaattggttttcttcgattctgtgcggcaaagctggcagaaggtgacat 205
               |||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 7726630 aagcctcaatgcaattggttttcttcgattctgtgcggcaaagctagcggaaggtgacat 7726571

                                                                           
Query: 206     cgggtcctcttcaaggctgaag--gaaccctcgt----ctcatttgaccaaagatggaaa 259
                || |||||||||||| |||||  ||| |||| |    |||  |||||||| ||||||||
Sbjct: 7726570 tggatcctcttcaaggttgaaggagaatcctccttctcctcgcttgaccaaggatggaaa 7726511

                                                                           
Query: 260     gcaggaaggtgcaattcaggttgataaggatgatactatacacttctggtttcctttatt 319
               ||||||| ||||| |||  |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 7726510 gcaggaaagtgcagttcttgttgataaggatgatactatacacttttggtttcctttatt 7726451

                     
Query: 320     agcagg 325
               ||||||
Sbjct: 7726450 agcagg 7726445
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  357 bits (180), Expect = 3e-95
 Identities = 276/308 (89%)
 Strand = Plus / Minus

                                                                           
Query: 321     gcaggattgtctgaacttactttcgaccttagaccagaaattaggaaaagttccttgcag 380
               |||||||| ||||||||||| ||||||||  |||| ||||| ||||||||| ||||||||
Sbjct: 7724183 gcaggattatctgaacttaccttcgacctacgacctgaaatcaggaaaagtgccttgcag 7724124

                                                                           
Query: 381     gtgttatttgacacattaagaaaccatggccatcttttctctcttcctttgtgggagaag 440
               ||||||||||||||||||||||||||||| ||||| |||||  | |||||||||||||||
Sbjct: 7724123 gtgttatttgacacattaagaaaccatggtcatctcttctccttgcctttgtgggagaag 7724064

                                                                           
Query: 441     gtgtttgattcagtacttttcccaatatttgattatgtacggcatgctatcgatccatct 500
               |||||||||||||| |||||||||||||||||||| ||||||||||| || |||||||| 
Sbjct: 7724063 gtgtttgattcagtgcttttcccaatatttgattacgtacggcatgccattgatccatca 7724004

                                                                           
Query: 501     ggtggttcttcacaaggacaaaatgcggaaaatgatcctgcagagcttgatcaagatgct 560
                |||||||| |||||||||| |||| ||||| ||||||| |||| |||||||||||||| 
Sbjct: 7724003 agtggttctccacaaggacagaatgtggaaagtgatccttcagaacttgatcaagatgca 7723944

                                                                           
Query: 561     tggatgtacgaaacgtgcactttggcccttcagctagttgtagaccttttcgtcaagttc 620
               ||||||||||| || |||||||||||||| ||||||||||| ||||| || || ||||||
Sbjct: 7723943 tggatgtacgagacatgcactttggccctgcagctagttgtggacctctttgttaagttc 7723884

                       
Query: 621     tatgacac 628
               ||||||||
Sbjct: 7723883 tatgacac 7723876



 Score =  329 bits (166), Expect = 7e-87
 Identities = 272/306 (88%), Gaps = 6/306 (1%)
 Strand = Plus / Minus

                                                                           
Query: 26      aattatcgaaaagattttgcgagattatttcccctacattaccgagactgagtcttcaac 85
               ||||||||| ||||||||||| || || || ||||||||||| ||||| |||||  ||||
Sbjct: 7724585 aattatcgagaagattttgcgggagtactttccctacattactgagaccgagtcgacaac 7724526

                                                                           
Query: 86      tttcactgattgtgtgaactgtcttattgcgttcaccaacagtaggtttaacaaggatat 145
               |||||||||||||||||||||||||||||| || || |||||||||||||||||||||||
Sbjct: 7724525 tttcactgattgtgtgaactgtcttattgcatttactaacagtaggtttaacaaggatat 7724466

                                                                           
Query: 146     aagccttaatgcaattggttttcttcgattctgtgcggcaaagctggcagaaggtgacat 205
               |||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 7724465 aagcctcaatgcaattggttttcttcgattctgtgcggcaaagctagcggaaggtgacat 7724406

                                                                           
Query: 206     cgggtcctcttcaaggctgaag--gaaccctcgt----ctcatttgaccaaagatggaaa 259
                || |||||||||||| |||||  ||| |||| |    |||  |||||||| ||||||||
Sbjct: 7724405 tggatcctcttcaaggttgaaggagaatcctccttctcctcgcttgaccaaggatggaaa 7724346

                                                                           
Query: 260     gcaggaaggtgcaattcaggttgataaggatgatactatacacttctggtttcctttatt 319
               ||||||| ||||| |||  |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 7724345 gcaggaaagtgcagttcttgttgataaggatgatactatacacttttggtttcctttatt 7724286

                     
Query: 320     agcagg 325
               ||||||
Sbjct: 7724285 agcagg 7724280
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>gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0078P24, from chromosome 3, complete sequence
          Length = 146930

 Score =  357 bits (180), Expect = 3e-95
 Identities = 276/308 (89%)
 Strand = Plus / Plus

                                                                          
Query: 321    gcaggattgtctgaacttactttcgaccttagaccagaaattaggaaaagttccttgcag 380
              |||||||| ||||||||||| ||||||||  |||| ||||| ||||||||| ||||||||
Sbjct: 126446 gcaggattatctgaacttaccttcgacctacgacctgaaatcaggaaaagtgccttgcag 126505

                                                                          
Query: 381    gtgttatttgacacattaagaaaccatggccatcttttctctcttcctttgtgggagaag 440
              ||||||||||||||||||||||||||||| ||||| |||||  | |||||||||||||||
Sbjct: 126506 gtgttatttgacacattaagaaaccatggtcatctcttctccttgcctttgtgggagaag 126565

                                                                          
Query: 441    gtgtttgattcagtacttttcccaatatttgattatgtacggcatgctatcgatccatct 500
              |||||||||||||| |||||||||||||||||||| ||||||||||| || |||||||| 
Sbjct: 126566 gtgtttgattcagtgcttttcccaatatttgattacgtacggcatgccattgatccatca 126625

                                                                          
Query: 501    ggtggttcttcacaaggacaaaatgcggaaaatgatcctgcagagcttgatcaagatgct 560
               |||||||| |||||||||| |||| ||||| ||||||| |||| |||||||||||||| 
Sbjct: 126626 agtggttctccacaaggacagaatgtggaaagtgatccttcagaacttgatcaagatgca 126685

                                                                          
Query: 561    tggatgtacgaaacgtgcactttggcccttcagctagttgtagaccttttcgtcaagttc 620
              ||||||||||| || |||||||||||||| ||||||||||| ||||| || || ||||||
Sbjct: 126686 tggatgtacgagacatgcactttggccctgcagctagttgtggacctctttgttaagttc 126745

                      
Query: 621    tatgacac 628
              ||||||||
Sbjct: 126746 tatgacac 126753



 Score =  329 bits (166), Expect = 7e-87
 Identities = 272/306 (88%), Gaps = 6/306 (1%)
 Strand = Plus / Plus

                                                                          
Query: 26     aattatcgaaaagattttgcgagattatttcccctacattaccgagactgagtcttcaac 85
              ||||||||| ||||||||||| || || || ||||||||||| ||||| |||||  ||||
Sbjct: 126044 aattatcgagaagattttgcgggagtactttccctacattactgagaccgagtcgacaac 126103

                                                                          
Query: 86     tttcactgattgtgtgaactgtcttattgcgttcaccaacagtaggtttaacaaggatat 145
              |||||||||||||||||||||||||||||| || || |||||||||||||||||||||||
Sbjct: 126104 tttcactgattgtgtgaactgtcttattgcatttactaacagtaggtttaacaaggatat 126163

                                                                          
Query: 146    aagccttaatgcaattggttttcttcgattctgtgcggcaaagctggcagaaggtgacat 205
              |||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 126164 aagcctcaatgcaattggttttcttcgattctgtgcggcaaagctagcggaaggtgacat 126223

                                                                          
Query: 206    cgggtcctcttcaaggctgaag--gaaccctcgt----ctcatttgaccaaagatggaaa 259
               || |||||||||||| |||||  ||| |||| |    |||  |||||||| ||||||||
Sbjct: 126224 tggatcctcttcaaggttgaaggagaatcctccttctcctcgcttgaccaaggatggaaa 126283

                                                                          
Query: 260    gcaggaaggtgcaattcaggttgataaggatgatactatacacttctggtttcctttatt 319
              ||||||| ||||| |||  |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 126284 gcaggaaagtgcagttcttgttgataaggatgatactatacacttttggtttcctttatt 126343

                    
Query: 320    agcagg 325
              ||||||
Sbjct: 126344 agcagg 126349
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>dbj|AK119229.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-A10, full
           insert sequence
          Length = 1360

 Score =  115 bits (58), Expect = 2e-22
 Identities = 91/102 (89%)
 Strand = Plus / Plus

                                                                       
Query: 527 ggaaaatgatcctgcagagcttgatcaagatgcttggatgtacgaaacgtgcactttggc 586
           ||||| ||||||| |||| |||||||||||||| ||||||||||| || |||||||||||
Sbjct: 1   ggaaagtgatccttcagaacttgatcaagatgcatggatgtacgagacatgcactttggc 60

                                                     
Query: 587 ccttcagctagttgtagaccttttcgtcaagttctatgacac 628
           ||| ||||||||||| ||||| || || ||||||||||||||
Sbjct: 61  cctgcagctagttgtggacctctttgttaagttctatgacac 102
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                                
Query: 87       ttcactgattgtgtgaactgtcttattgcgtt 118
                |||||||||||||| |||||||||||||||||
Sbjct: 24667992 ttcactgattgtgttaactgtcttattgcgtt 24668023
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>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0029G06
          Length = 169711

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 87   ttcactgattgtgtgaactgtcttattgcgtt 118
            |||||||||||||| |||||||||||||||||
Sbjct: 1673 ttcactgattgtgttaactgtcttattgcgtt 1704
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>dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0040H10
          Length = 173301

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                              
Query: 87     ttcactgattgtgtgaactgtcttattgcgtt 118
              |||||||||||||| |||||||||||||||||
Sbjct: 151185 ttcactgattgtgttaactgtcttattgcgtt 151216
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>dbj|AK106454.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-F09, full
           insert sequence
          Length = 2687

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 87  ttcactgattgtgtgaactgtcttattgcgtt 118
           |||||||||||||| |||||||||||||||||
Sbjct: 558 ttcactgattgtgttaactgtcttattgcgtt 589
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>gb|AC020622.3|F22M8 Sequence of BAC F22M8 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 47295

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 321   gcaggattgtctgaacttactttcgaccttagaccagaaattaggaa 367
             ||||| || |||||||||| ||||||||  ||| |||||||||||||
Sbjct: 27388 gcaggtttatctgaacttagtttcgacccaagagcagaaattaggaa 27342
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>ref|NM_100076.2| Arabidopsis thaliana guanyl-nucleotide exchange factor AT1G01960
            mRNA, complete cds
          Length = 5495

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 330  tctgaacttactttcgaccttagaccagaaattaggaa 367
            |||||||||| ||||||||  ||| |||||||||||||
Sbjct: 4015 tctgaacttagtttcgacccaagagcagaaattaggaa 4052
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>gb|BC044280.1| Xenopus laevis, Similar to hypothetical protein LOC93380, clone
           IMAGE:5543271, mRNA
          Length = 2503

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 386 atttgacacattaagaaaccat 407
           ||||||||||||||||||||||
Sbjct: 287 atttgacacattaagaaaccat 308
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>gb|BC072899.1| Xenopus laevis MGC80346 protein, mRNA (cDNA clone MGC:80346
           IMAGE:5074286), complete cds
          Length = 744

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 387 tttgacacattaagaaaccat 407
           |||||||||||||||||||||
Sbjct: 274 tttgacacattaagaaaccat 294
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>gb|AC164972.2| Mus musculus BAC clone RP23-143M15 from chromosome 9, complete sequence
          Length = 237322

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 583   tggcccttcagctagttgtag 603
             |||||||||||||||||||||
Sbjct: 81471 tggcccttcagctagttgtag 81451
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>emb|Z78419.1|CEF26A3 Caenorhabditis elegans Cosmid F26A3, complete sequence
          Length = 38019

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 492   gatccatctggtggttcttca 512
             |||||||||||||||||||||
Sbjct: 31321 gatccatctggtggttcttca 31341



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 492   gatccatctggtggttcttca 512
             |||||||||||||||||||||
Sbjct: 31159 gatccatctggtggttcttca 31179
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>gb|AC113081.8| Mus musculus chromosome 9, clone RP23-291B23, complete sequence
          Length = 217420

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 639   cttctgaagaaagttctttca 659
             |||||||||||||||||||||
Sbjct: 57088 cttctgaagaaagttctttca 57108
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>emb|AL359272.9| Human DNA sequence from clone RP11-554P16 on chromosome X Contains
            the 5' end of gene KIAA1202 and a CpG island, complete
            sequence
          Length = 173510

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 410  ccatcttttctctcttccttt 430
            |||||||||||||||||||||
Sbjct: 6085 ccatcttttctctcttccttt 6065
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>emb|AL663035.8| Mouse DNA sequence from clone RP23-432G17 on chromosome 11 Contains a
              novel pseudogene, complete sequence
          Length = 203319

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 410    ccatcttttctctcttccttt 430
              |||||||||||||||||||||
Sbjct: 143994 ccatcttttctctcttccttt 144014
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>gb|AC157512.3| Mus musculus BAC clone RP24-399L6 from chromosome 9, complete sequence
          Length = 148736

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 639   cttctgaagaaagttctttca 659
             |||||||||||||||||||||
Sbjct: 11944 cttctgaagaaagttctttca 11924
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>gb|AF411808.1| Lycopersicon esculentum BAC clone Clemson_Id 62O11, complete sequence
          Length = 70347

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 394   cattaagaaaccatggccatctttt 418
             |||||||||| ||||||||||||||
Sbjct: 16648 cattaagaaaacatggccatctttt 16624
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>gb|AC154190.2| Mus musculus BAC clone RP24-465P16 from chromosome 16, complete
             sequence
          Length = 150894

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 253   atggaaagcaggaaggtgcaa 273
             |||||||||||||||||||||
Sbjct: 63179 atggaaagcaggaaggtgcaa 63199
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>ref|NM_059733.1| Caenorhabditis elegans F26A3.5 (F26A3.5) mRNA, complete cds
          Length = 942

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 492 gatccatctggtggttcttca 512
           |||||||||||||||||||||
Sbjct: 262 gatccatctggtggttcttca 282



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 492 gatccatctggtggttcttca 512
           |||||||||||||||||||||
Sbjct: 169 gatccatctggtggttcttca 189
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>gb|AC087773.1|AC087773 Genomic Sequence For Lycopersicon esculentum Clone T62O11, complete
             sequence
          Length = 70497

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 394   cattaagaaaccatggccatctttt 418
             |||||||||| ||||||||||||||
Sbjct: 16648 cattaagaaaacatggccatctttt 16624
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>gb|AC084652.1|CBRG45O11 Caenorhabditis briggsae cosmid G45O11, complete sequence
          Length = 26703

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 273  attcaggttgataaggatgat 293
            |||||||||||||||||||||
Sbjct: 5299 attcaggttgataaggatgat 5279
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>emb|BX855607.2| Mouse DNA sequence from clone RP24-562D24 on chromosome X, complete
           sequence
          Length = 24086

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 503 tggttcttcacaaggacaaaa 523
           |||||||||||||||||||||
Sbjct: 283 tggttcttcacaaggacaaaa 263
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>emb|BX119960.5| Mouse DNA sequence from clone RP23-223O17 on chromosome X, complete
             sequence
          Length = 79003

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 503   tggttcttcacaaggacaaaa 523
             |||||||||||||||||||||
Sbjct: 77286 tggttcttcacaaggacaaaa 77266
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>emb|CT025567.10| Mouse DNA sequence from clone RP23-302A9 on chromosome 9, complete
              sequence
          Length = 238033

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 583    tggcccttcagctagttgtag 603
              |||||||||||||||||||||
Sbjct: 194928 tggcccttcagctagttgtag 194908
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>ref|NM_115950.2| Arabidopsis thaliana guanyl-nucleotide exchange factor AT3G60860
            mRNA, complete cds
          Length = 5452

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 95/120 (79%)
 Strand = Plus / Plus

                                                                        
Query: 26   aattatcgaaaagattttgcgagattatttcccctacattaccgagactgagtcttcaac 85
            ||||||||| |||||| | ||||| |||||||| ||||| || ||||| ||  |  | ||
Sbjct: 3735 aattatcgagaagattattcgagaatatttcccatacatcactgagacagaaaccaccac 3794

                                                                        
Query: 86   tttcactgattgtgtgaactgtcttattgcgttcaccaacagtaggtttaacaaggatat 145
            ||| || ||||||||||| || ||  |||| |||||||| |  || |||| |||||||||
Sbjct: 3795 ttttacagattgtgtgaattgcctagttgcattcaccaataacagatttagcaaggatat 3854
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>gb|U80022.2| Caenorhabditis elegans cosmid F12F3, complete sequence
          Length = 36859

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   ttcaggttgataaggatgat 293
             ||||||||||||||||||||
Sbjct: 28286 ttcaggttgataaggatgat 28267
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>gb|AC147312.3| Pan troglodytes BAC clone RP43-50K12 from 7, complete sequence
          Length = 214157

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 384   ttatttgacacattaagaaa 403
             ||||||||||||||||||||
Sbjct: 76864 ttatttgacacattaagaaa 76845
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>gb|AY069990.1| Arthrobacter sp. BT801 hydantoin racemase HyuA (hyuA),
           L-hydantoinase HyuH (hyuH), and L-N-carbamoylase HyuC
           (hyuC) genes, complete cds
          Length = 4261

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 593 gctagttgtagaccttttcg 612
           ||||||||||||||||||||
Sbjct: 980 gctagttgtagaccttttcg 961
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>gb|AC139853.17| Medicago truncatula clone mth2-13d20, complete sequence
          Length = 93375

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 416   tttctctcttcctttgtggg 435
             ||||||||||||||||||||
Sbjct: 20641 tttctctcttcctttgtggg 20622
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>emb|AL450265.11| Human DNA sequence from clone RP11-477A7 on chromosome 9 Contains part
             of the gene for CDw92 antigen (CDW92) (CTL1), complete
             sequence
          Length = 68871

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 368   aagttccttgcaggtgttat 387
             ||||||||||||||||||||
Sbjct: 52982 aagttccttgcaggtgttat 53001
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>emb|AL022164.1|HS581F7 Human DNA sequence from clone RP4-581F7 on chromosome Xq26.1-27.3,
             complete sequence
          Length = 156432

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   agcaggaaggtgcaattcag 278
             ||||||||||||||||||||
Sbjct: 48710 agcaggaaggtgcaattcag 48729
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>gb|AC012308.12| Homo sapiens chromosome 10 clone RP11-5G18, complete sequence
          Length = 163816

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 625    acactgtccatccacttctg 644
              ||||||||||||||||||||
Sbjct: 157015 acactgtccatccacttctg 156996
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>emb|AJ627183.1| Nicotiana tabacum xylt gene for putative
            beta-(1,2)-xylosyltransferase, exons 1-3
          Length = 4973

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 643  tgaagaaagttctttcactc 662
            ||||||||||||||||||||
Sbjct: 3451 tgaagaaagttctttcactc 3470
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>gb|AC023283.10| Homo sapiens chromosome 10 clone RP11-539I5, complete sequence
          Length = 218074

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 625    acactgtccatccacttctg 644
              ||||||||||||||||||||
Sbjct: 154146 acactgtccatccacttctg 154165
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>gb|AC092783.2| Homo sapiens chromosome 1 clone RP5-827O9, complete sequence
          Length = 111763

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 413   tcttttctctcttcctttgt 432
             ||||||||||||||||||||
Sbjct: 99565 tcttttctctcttcctttgt 99584
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>gb|AC092019.2| Homo sapiens chromosome 1 clone RP5-1174I8, complete sequence
          Length = 92998

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 413   tcttttctctcttcctttgt 432
             ||||||||||||||||||||
Sbjct: 40133 tcttttctctcttcctttgt 40152
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>gb|AC010364.6| Homo sapiens chromosome 5 clone CTD-2042D5, complete sequence
          Length = 163400

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 410   ccatcttttctctcttcctt 429
             ||||||||||||||||||||
Sbjct: 23651 ccatcttttctctcttcctt 23632
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>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 356     agaaattaggaaaagttccttgca 379
               ||||||||||||||||| ||||||
Sbjct: 4922846 agaaattaggaaaagttgcttgca 4922869
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 36       aagattttgcgagattattt 55
                ||||||||||||||||||||
Sbjct: 30687347 aagattttgcgagattattt 30687366
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>gb|AC084048.5| Homo sapiens BAC clone RP11-61G19 from 4, complete sequence
          Length = 131584

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 405  catggccatcttttctctct 424
            ||||||||||||||||||||
Sbjct: 4707 catggccatcttttctctct 4688
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>gb|AC010450.6|AC010450 Homo sapiens chromosome 5 clone CTD-2242D16, complete sequence
          Length = 108916

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 410   ccatcttttctctcttcctt 429
             ||||||||||||||||||||
Sbjct: 86871 ccatcttttctctcttcctt 86852
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>gb|AC008747.5|AC008747 Homo sapiens chromosome 19 clone CTD-2588C8, complete sequence
          Length = 159597

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 300   cacttctggtttcctttatt 319
             ||||||||||||||||||||
Sbjct: 93010 cacttctggtttcctttatt 93029
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>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1060H01
          Length = 157987

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     aagattttgcgagattattt 55
              ||||||||||||||||||||
Sbjct: 129624 aagattttgcgagattattt 129643
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>gb|AC012063.7| Homo sapiens BAC clone RP11-116F11 from 2, complete sequence
          Length = 125055

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 446   tgattcagtacttttcccaa 465
             ||||||||||||||||||||
Sbjct: 88793 tgattcagtacttttcccaa 88774
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>gb|AC114480.2| Homo sapiens chromosome 3 clone RP11-755B10, complete sequence
          Length = 196773

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                            
Query: 107  tcttattgcgttcaccaacagtaggtttaaca 138
            ||||||||| || |||||||||||||||||||
Sbjct: 6208 tcttattgc-ttgaccaacagtaggtttaaca 6238
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>gb|AC092418.3| Homo sapiens chromosome 3 clone RP11-229A12, complete sequence
          Length = 164500

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                              
Query: 107    tcttattgcgttcaccaacagtaggtttaaca 138
              ||||||||| || |||||||||||||||||||
Sbjct: 159406 tcttattgc-ttgaccaacagtaggtttaaca 159436
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>gb|AC006406.1|AC006406 Homo sapiens, clone hRPK.25_A_1, complete sequence
          Length = 159115

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 410    ccatcttttctctcttcctt 429
              ||||||||||||||||||||
Sbjct: 139176 ccatcttttctctcttcctt 139195
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>emb|CT574563.2| Pan troglodytes chromosome X clone CH251-7J11 map Xq28, complete
             sequence
          Length = 204138

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   agcaggaaggtgcaattcag 278
             ||||||||||||||||||||
Sbjct: 16812 agcaggaaggtgcaattcag 16831
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>emb|AL162295.1|ATT4C21 Arabidopsis thaliana DNA chromosome 3, BAC clone T4C21
          Length = 107865

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 95/120 (79%)
 Strand = Plus / Plus

                                                                         
Query: 26    aattatcgaaaagattttgcgagattatttcccctacattaccgagactgagtcttcaac 85
             ||||||||| |||||| | ||||| |||||||| ||||| || ||||| ||  |  | ||
Sbjct: 90801 aattatcgagaagattattcgagaatatttcccatacatcactgagacagaaaccaccac 90860

                                                                         
Query: 86    tttcactgattgtgtgaactgtcttattgcgttcaccaacagtaggtttaacaaggatat 145
             ||| || ||||||||||| || ||  |||| |||||||| |  || |||| |||||||||
Sbjct: 90861 ttttacagattgtgtgaattgcctagttgcattcaccaataacagatttagcaaggatat 90920
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>gb|AC163671.5| Mus musculus BAC clone RP23-21K2 from chromosome 3, complete sequence
          Length = 215382

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 626   cactgtccatccacttctga 645
             ||||||||||||||||||||
Sbjct: 78825 cactgtccatccacttctga 78844
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>emb|AL683803.9| Mouse DNA sequence from clone RP23-448D15 on chromosome X, complete
             sequence
          Length = 93337

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 413   tcttttctctcttcctttgtggga 436
             |||||||| |||||||||||||||
Sbjct: 73844 tcttttctttcttcctttgtggga 73821
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>gb|AY130758.1| Caenorhabditis elegans titin locus, complete sequence
          Length = 126899

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 274   ttcaggttgataaggatgat 293
             ||||||||||||||||||||
Sbjct: 79754 ttcaggttgataaggatgat 79773


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,387,006
Number of Sequences: 3902068
Number of extensions: 6387006
Number of successful extensions: 131508
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 131208
Number of HSP's gapped (non-prelim): 308
length of query: 666
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 643
effective length of database: 17,143,297,704
effective search space: 11023140423672
effective search space used: 11023140423672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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