>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 32.7 bits (73), Expect = 0.69
 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 11/57 (19%)
 Frame = +2

Query: 143 HPFILTVARPPRSHVYMPSYNSTPKLT----------PPDSPP-RGYAPLSPPRRHS 280
           HP   T A+PP + +Y PS    P  T          P  SPP RG+ P  P  RH+
Sbjct: 177 HPPPPTYAQPPPTPIYSPSPQVQPPPTYSPPPPTHVQPTPSPPSRGHQPQPPTHRHA 233

>STP22_YEAST (P25604) Suppressor protein STP22 of temperature-sensitive|
           alpha-factor receptor and arginine permease (Vacuolar
           protein sorting-associated protein VPS23)
          Length = 385

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
 Frame = +2

Query: 170 PPRSHVYMPSYNSTPKLTPPDSPPRGYAPLSPPRRHSISIASMNRLD-DKSSVFSSNHSS 346
           PP+ +  +    +TP L P    P    PL PP     +  +++ +D D + +  +NH  
Sbjct: 164 PPKPNTQLQQEQNTPPLPPKPKSPHLKPPLPPPPPPQPASNALDLMDMDNTDISPTNHHE 223

Query: 347 MTSPFDT 367
           M     T
Sbjct: 224 MLQNLQT 230

>WBS14_MOUSE (Q99MZ3) Williams-Beuren syndrome chromosome region 14 protein|
           homolog (Mlx interactor) (MLX-interacting protein-like)
          Length = 864

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 23/63 (36%), Positives = 30/63 (47%)
 Frame = +2

Query: 158 TVARPPRSHVYMPSYNSTPKLTPPDSPPRGYAPLSPPRRHSISIASMNRLDDKSSVFSSN 337
           TV+  PR+  + P     P  TPP  PP G A L+PPR  S+ +    RL   +S  S  
Sbjct: 570 TVSEIPRARAFFPPI---PAPTPPRPPP-GPATLAPPR--SLVVPKAERLSPPASSGSER 623

Query: 338 HSS 346
             S
Sbjct: 624 RLS 626

>EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)|
          Length = 283

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
 Frame = +2

Query: 167 RPPRSHVYMP-SYNSTPKLTPPDSPPRGYAPLSPPRRHSISIASMNRLDDKSSVFSSNHS 343
           +PP+ H   P +Y  +PK TPP + P+   P   P               KS V+     
Sbjct: 62  KPPKEHKPTPPTYTPSPKPTPPPATPKPTPPTYTPSP-----------KPKSPVYPPPPK 110

Query: 344 SMTSPFDTPS 373
           + T P  TPS
Sbjct: 111 ASTPPTYTPS 120



 Score = 28.9 bits (63), Expect = 10.0
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
 Frame = +2

Query: 167 RPPRSHVYMPSYNS------TPKLTPPDSPPRGYAPLSPPRRHSIS 286
           +PP   VY PS         TPK TPP   P    P++ P  H+ S
Sbjct: 140 KPPTPPVYTPSPKPPVTKPPTPKPTPPVYTPNPKPPVTKPPTHTPS 185

>RPGF6_HUMAN (Q8TEU7) Rap guanine nucleotide exchange factor 6 (PDZ|
            domain-containing guanine nucleotide exchange factor 2)
            (PDZ-GEF2) (RA-GEF-2)
          Length = 1601

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 13/46 (28%), Positives = 27/46 (58%)
 Frame = +2

Query: 197  SYNSTPKLTPPDSPPRGYAPLSPPRRHSISIASMNRLDDKSSVFSS 334
            S +S+P  +P  SP +GY  +   +  ++S +S + +  +SS+ S+
Sbjct: 1233 SLHSSPPASPQGSPHKGYTLIPSAKSDNLSDSSHSEISSRSSIVSN 1278

>LMD1_HUMAN (P29536) Leiomodin-1 (Leiomodin, muscle form) (64 kDa autoantigen|
           D1) (64 kDa autoantigen 1D) (64 kDa autoantigen 1D3)
           (Thyroid-associated ophthalmopathy autoantigen) (Smooth
           muscle leiomodin) (SM-Lmod)
          Length = 572

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 14/55 (25%)
 Frame = +2

Query: 194 PSYNSTPKLTPPDSPPRGYAPLSPP--------------RRHSISIASMNRLDDK 316
           PS   +PK +P +SP +G AP +PP               ++S+S A+  ++ DK
Sbjct: 483 PSPQPSPKPSPKNSPKKGGAPAAPPPPPPPLAPPLIMENLKNSLSPATQRKMGDK 537

>PRDM2_RAT (Q63755) PR domain zinc finger protein 2 (PR domain-containing|
            protein 2) (Retinoblastoma protein-interacting
            zinc-finger protein) (Zinc finger protein RIZ)
          Length = 1706

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 24/75 (32%), Positives = 30/75 (40%)
 Frame = +2

Query: 146  PFILTVARPPRSHVYMPSYNSTPKLTPPDSPPRGYAPLSPPRRHSISIASMNRLDDKSSV 325
            PF  T A+ P   +  P+ + +P   PP  P    A   PP   S S          SS 
Sbjct: 1002 PFSNTTAQSPLP-ILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSS--------SSSSS 1052

Query: 326  FSSNHSSMTSPFDTP 370
            F S+  S TSP   P
Sbjct: 1053 FPSSSCSSTSPSPPP 1067

>PDE3A_MOUSE (Q9Z0X4) cGMP-inhibited 3',5'-cyclic phosphodiesterase A (EC|
           3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase A)
           (CGI-PDE A)
          Length = 1141

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 12/79 (15%)
 Frame = +2

Query: 155 LTVARPPRSHVYMPSYNSTPKLTPPDSPP------------RGYAPLSPPRRHSISIASM 298
           +T+ R P SH  +    S P L+P   PP            +G     P  R   ++   
Sbjct: 553 VTIKRGPGSHRALTYTQSAPDLSPQIPPPSVICSSCGRPYSQGNPADGPSERSGPAMLKP 612

Query: 299 NRLDDKSSVFSSNHSSMTS 355
           NR DD S V S   ++  S
Sbjct: 613 NRTDDTSQVTSDYETNNNS 631

>AFF1_HUMAN (P51825) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene|
           AF4) (FEL protein)
          Length = 1210

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 18/52 (34%), Positives = 21/52 (40%)
 Frame = +2

Query: 203 NSTPKLTPPDSPPRGYAPLSPPRRHSISIASMNRLDDKSSVFSSNHSSMTSP 358
           N   K++ P +PP G     PPRRH  S  S        S  S  HS    P
Sbjct: 517 NWLTKVSQPAAPPEGPRSTEPPRRHPESKGS------SDSATSQEHSESKDP 562

>NPBL_COPCI (Q00333) Protein rad9 (SCC2 homolog)|
          Length = 2157

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 21/74 (28%), Positives = 36/74 (48%)
 Frame = +2

Query: 152 ILTVARPPRSHVYMPSYNSTPKLTPPDSPPRGYAPLSPPRRHSISIASMNRLDDKSSVFS 331
           ++ +  PP   +   SY     ++ P +P RG APL+P  R S + +        +S+ S
Sbjct: 359 VVEIHSPPPKRIQ--SYKPMTLISQPLTPSRG-APLTPTSRASNASSVPTTASSSTSITS 415

Query: 332 SNHSSMTSPFDTPS 373
            + SS T+   TP+
Sbjct: 416 MSSSSKTTVPMTPT 429

>PIGR_BOVIN (P81265) Polymeric-immunoglobulin receptor precursor (Poly-Ig|
           receptor) (PIGR) [Contains: Secretory component]
          Length = 757

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +1

Query: 163 GQATPLACIY--AIVQQHTKAYSPRLTSKGLCTTLTTKETFNLD 288
           G++  + C Y    V +HT+ Y  R  ++G CTTL + E +  D
Sbjct: 33  GRSVSIKCYYPPTSVNRHTRKYWCRQGAQGRCTTLISSEGYVSD 76

>CD248_MOUSE (Q91V98) Endosialin precursor (Tumor endothelial marker 1) (CD248|
           antigen)
          Length = 765

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 9/84 (10%)
 Frame = +2

Query: 146 PFILTVARPPRSHVYMPSYNSTPKLTPPDSP--PRGYAPLSPP---RRHSISIASMNRLD 310
           P +++  RP     +  S  S  +  PP SP  P   AP +PP     H I     N  D
Sbjct: 450 PMVISATRPTLPSAHKTSVISATR--PPLSPVHPPAMAPATPPAVFSEHQIPKIKANYPD 507

Query: 311 ----DKSSVFSSNHSSMTSPFDTP 370
                K  + S+ H + + P+  P
Sbjct: 508 LPFGHKPGITSATHPARSPPYQPP 531

>V70K_TYMV (P10357) 69 kDa protein|
          Length = 628

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 22/74 (29%), Positives = 31/74 (41%)
 Frame = +2

Query: 152 ILTVARPPRSHVYMPSYNSTPKLTPPDSPPRGYAPLSPPRRHSISIASMNRLDDKSSVFS 331
           + ++  PPRS   + +   T     P SP R   P SPP      +     +D +    S
Sbjct: 517 LASLPSPPRSVGIIHTAPQTVLPANPPSPTRHLPPTSPPWILQSPVGEDAIVDSEDDSIS 576

Query: 332 SNHSSMTSPFDTPS 373
           S HS     FD+PS
Sbjct: 577 SFHS---HDFDSPS 587

>WRKY7_ARATH (Q9STX0) Probable WRKY transcription factor 7 (WRKY DNA-binding|
           protein 7)
          Length = 353

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 26/79 (32%), Positives = 31/79 (39%), Gaps = 9/79 (11%)
 Frame = +2

Query: 167 RPPRSHVYMPSYNSTPKLTPPDSPPR---------GYAPLSPPRRHSISIASMNRLDDKS 319
           RPP SH    + N T   +   SPP           +AP SPP   + S  S +R D   
Sbjct: 154 RPPLSHNNNNNQNQTKNGSSSSSPPMLANGAPSTINFAP-SPPVSATNSFMSSHRCDT-- 210

Query: 320 SVFSSNHSSMTSPFDTPSQ 376
               S H S    F  PSQ
Sbjct: 211 ---DSTHMSSGFEFTNPSQ 226

>YA9F_SCHPO (Q09791) Hypothetical protein C13G6.15c in chromosome I|
          Length = 163

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
 Frame = +2

Query: 191 MPSYNSTPKLTPPDSPPRGYAPL---SPPRRHSISIASMNRLDDKSSVFSSNHSS 346
           +P +     ++PP SPP G+ P+   SP  +H      + +LD+  +   ++HS+
Sbjct: 87  VPKFEKNWLISPPGSPPVGWEPIVEESPNSQHLAHDIQL-KLDELGNALLNDHSA 140

>ZIPA_SHIFL (Q83QN9) Cell division protein zipA homolog|
          Length = 327

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = +2

Query: 164 ARPPRSHVYMPSYNSTPKLTPPDSPPRGYAP 256
           ARP   H Y+P Y S     P   PP    P
Sbjct: 83  ARPSPQHQYLPPYASAQPRQPVQQPPEAQVP 113

>PRRX2_MOUSE (Q06348) Paired mesoderm homeobox protein 2 (PRX-2) (Homeobox|
           protein S8)
          Length = 247

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
 Frame = +2

Query: 173 PRSHVYMPSYNSTPKLTP----PDSPPRGYAPLSPPRRHSISIASMNRLDDKSSVFSSNH 340
           PR     P Y S P  +P    P   P G +P +P    + SIAS+     K+  FS +H
Sbjct: 184 PRPTTMSPDYLSWPASSPYSSVPPYSPGGSSPATPGVNMANSIASLRL---KAKEFSLHH 240

Query: 341 SSM 349
           S +
Sbjct: 241 SQV 243

>GR65_HUMAN (Q9BQQ3) Golgi reassembly-stacking protein 1 (Golgi|
           reassembly-stacking protein of 65 kDa) (GRASP65) (Golgi
           peripheral membrane protein p65) (Golgi phosphoprotein
           5) (GOLPH5)
          Length = 439

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
 Frame = +2

Query: 194 PSYNSTPKLTPPDS------PPRGYAPLSPPRRHSISIASMNRLDD-KSSVFSSNHSSMT 352
           PSY+  P  TPP S      PP    P  P    S S+ + +R  D   ++  +  SSM 
Sbjct: 206 PSYHKKPPGTPPPSALPLGAPPPDALPPGPTPEDSPSLETGSRQSDYMEALLQAPGSSME 265

Query: 353 SPFDTP 370
            P   P
Sbjct: 266 DPLPGP 271

>EXTN_MAIZE (P14918) Extensin precursor (Proline-rich glycoprotein)|
          Length = 267

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +2

Query: 167 RPPRSHVYMPSYNSTPKLTPPDSPPRGYAPLSPPRRHSIS 286
           +PP      P+Y  TPK  PP + P  Y P +PP  H+ S
Sbjct: 225 KPPTPKPTPPTYTPTPK--PPATKPPTYTP-TPPVSHTPS 261

>VGLH_HHV1E (P08356) Glycoprotein H precursor|
          Length = 838

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 18/63 (28%), Positives = 28/63 (44%)
 Frame = +2

Query: 170 PPRSHVYMPSYNSTPKLTPPDSPPRGYAPLSPPRRHSISIASMNRLDDKSSVFSSNHSSM 349
           P   +V   S+ S P+ TPP  PP G       RRH  +   +  L + S+ + +    +
Sbjct: 175 PRGDNVATASHPSGPRDTPPPRPPVG------ARRHPTTELDITHLHNASTTWLATRGLL 228

Query: 350 TSP 358
            SP
Sbjct: 229 RSP 231

>VGLH_HHV11 (P06477) Glycoprotein H precursor|
          Length = 838

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 18/63 (28%), Positives = 28/63 (44%)
 Frame = +2

Query: 170 PPRSHVYMPSYNSTPKLTPPDSPPRGYAPLSPPRRHSISIASMNRLDDKSSVFSSNHSSM 349
           P   +V   S+ S P+ TPP  PP G       RRH  +   +  L + S+ + +    +
Sbjct: 175 PRGDNVATASHPSGPRDTPPPRPPVG------ARRHPTTELDITHLHNASTTWLATRGLL 228

Query: 350 TSP 358
            SP
Sbjct: 229 RSP 231


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,733,969
Number of Sequences: 219361
Number of extensions: 1599396
Number of successful extensions: 5608
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5531
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)