ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags20b02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome... 100 9e-18
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 100 9e-18
3dbj|AK062289.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
4gb|AY109843.1| Zea mays CL6204_1 mRNA sequence 50 0.008
5gb|AC131330.25| Mus musculus chromosome 14, clone RP23-477H13, c... 44 0.48
6gb|AC092156.2| Homo sapiens BAC clone RP11-326J14 from 2, comple... 44 0.48
7gb|AC154186.1| Mus musculus BAC clone RP24-435B3 from chromosome... 44 0.48
8gb|AC098647.2| Homo sapiens chromosome 3 clone RP11-130G7, compl... 42 1.9
9gb|AC099779.2| Homo sapiens chromosome 3 clone RP11-760G13, comp... 42 1.9
10gb|AC174443.3| Mus musculus BAC clone RP24-298O17 from chromosom... 42 1.9
11gb|AC175830.2| Mus musculus BAC clone RP24-74O10 from chromosome... 42 1.9
12gb|AC061958.11|AC061958 Homo sapiens chromosome 3 clone RP11-6B7... 42 1.9
13gb|AY752846.1| Culicoides sonorensis clone CsTRY1_049 serine pro... 42 1.9
14gb|AC006344.2|AC006344 Homo sapiens PAC clone RP4-726N20 from 7q... 42 1.9
15ref|XM_473197.1| Oryza sativa (japonica cultivar-group), predic... 40 7.4
16gb|AC091787.6| Oryza sativa (japonica cultivar-group) chromosome... 40 7.4
17gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.4
18emb|CR318609.7| Zebrafish DNA sequence from clone DKEY-95L14 in ... 40 7.4
19gb|AC124469.4| Mus musculus BAC clone RP24-172B22 from chromosom... 40 7.4
20gb|AC140139.2| Homo sapiens chromosome 5 clone RP11-1417I21, com... 40 7.4
21gb|AC138866.2| Homo sapiens chromosome 5 clone RP11-1415C14, com... 40 7.4
22gb|AC146949.1| Homo sapiens chromosome 5 clone RP11-1198D22, com... 40 7.4
23gb|AC145138.2| Homo sapiens chromosome 5 clone RP11-1280N14, com... 40 7.4
24gb|AC145144.2| Homo sapiens chromosome 5 clone RP11-1432L1, comp... 40 7.4
25gb|AC139510.3| Homo sapiens chromosome 5 clone RP11-977J23, comp... 40 7.4
26emb|CR628344.5| Zebrafish DNA sequence from clone DKEY-217K23 in... 40 7.4
27emb|AL662918.7| Human DNA sequence from clone RP11-176B3 on chro... 40 7.4
28emb|AL596065.3| Human DNA sequence from clone RP11-187B2 on chro... 40 7.4
29gb|AC146335.1| Homo sapiens chromosome 5 clone RP11-1305N21, com... 40 7.4
30gb|AC139277.2| Homo sapiens chromosome 5 clone RP11-619K7, compl... 40 7.4
31gb|AC138911.2| Homo sapiens chromosome 5 clone RP11-618O22, comp... 40 7.4
32emb|AL136971.7| Human DNA sequence from clone RP3-322A2 on chrom... 40 7.4
33gb|AC132802.2| Homo sapiens chromosome 5 clone CTC-273M15, compl... 40 7.4
34emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4,... 40 7.4
35emb|BX088646.21| Zebrafish DNA sequence from clone DKEY-42F19 in... 40 7.4
36gb|AC026898.8| Homo sapiens chromosome 18, clone RP11-767C4, com... 40 7.4
37emb|BX908780.7| Zebrafish DNA sequence from clone CH211-198K9 in... 40 7.4
38emb|AL662785.5| Mouse DNA sequence from clone RP23-186N7 on chro... 40 7.4
39emb|BX511252.17| Zebrafish DNA sequence from clone CH211-240E14 ... 40 7.4
40emb|BX322584.16| Zebrafish DNA sequence from clone RP71-27M6 in ... 40 7.4
41gb|AC182492.2| Pan troglodytes BAC clone CH251-294F23 from chrom... 40 7.4
42emb|BX323600.8| Zebrafish DNA sequence from clone CH211-234C2 in... 40 7.4
43dbj|AK095318.1| Homo sapiens cDNA FLJ37999 fis, clone CTONG2012029 40 7.4
44gb|AC063953.13| Homo sapiens 3 BAC RP11-317I15 (Roswell Park Can... 40 7.4
45gb|AC004673.1| Homo sapiens X BAC GSHB-590J15 (Genome Systems Hu... 40 7.4
46gb|AC107624.1| Homo sapiens chromosome 3 clone RP11-744H21, comp... 40 7.4
47gb|AC104066.3| Homo sapiens BAC clone RP11-177B4 from 4, complet... 40 7.4
48emb|BX510367.7| Zebrafish DNA sequence from clone DKEY-117M4 in ... 40 7.4
49gb|AC153137.4| Mus musculus BAC clone RP23-471J16 from chromosom... 40 7.4
50gb|AC027345.5| Homo sapiens chromosome 5 clone CTD-2345H1, compl... 40 7.4
51gb|AC010217.6| Homo sapiens chromosome 5 clone CTC-202F24, compl... 40 7.4
52gb|AC010237.8|AC010237 Homo sapiens chromosome 5 clone CTC-348J2... 40 7.4
53gb|AC022119.4|AC022119 Homo sapiens chromosome 5 clone CTC-566F1... 40 7.4
54emb|BX088698.22| Mouse DNA sequence from clone RP23-309D15 on ch... 40 7.4
55gb|AC023118.4|AC023118 Homo sapiens BAC clone RP11-277L22 from 1... 40 7.4
56gb|AF137023.1|AF137023 Wollastonia biflora methionine S-methyltr... 40 7.4
57dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
58dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
59gb|AC139500.2| Homo sapiens chromosome 5 clone RP11-864E4, compl... 40 7.4
60dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
61gb|AC139834.2| Homo sapiens chromosome 5 clone RP11-974F13, comp... 40 7.4
62gb|AC140175.2| Homo sapiens chromosome 5 clone RP11-833G1, compl... 40 7.4
63gb|AC149155.3| Xenopus tropicalis clone ISB-242B17, complete seq... 40 7.4
64gb|AC138951.2| Homo sapiens chromosome 5 clone RP11-823P9, compl... 40 7.4
65gb|AC118459.2| Homo sapiens chromosome 5 clone RP11-124L9, compl... 40 7.4
66gb|AC093308.4| Homo sapiens chromosome 5 clone RP11-96B3, comple... 40 7.4
67gb|AC131392.2| Homo sapiens chromosome 5 clone RP11-98J23, compl... 40 7.4
68dbj|AP004272.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
69emb|CR735122.6| Zebrafish DNA sequence from clone CH211-111N6 in... 40 7.4
70emb|BX649294.7| Zebrafish DNA sequence from clone CH211-223C9 in... 40 7.4
71emb|AL928920.5| Zebrafish DNA sequence from clone DKEY-14A7 in l... 40 7.4
72emb|AL953847.13| Zebrafish DNA sequence from clone CH211-255A4 i... 40 7.4
73emb|AL954768.7| Zebrafish DNA sequence from clone CH211-254L23 i... 40 7.4
74emb|AL731629.2|OSJN00274 Oryza sativa genomic DNA, chromosome 4,... 40 7.4
75gb|AC124747.3| Mus musculus BAC clone RP23-243O9 from 12, comple... 40 7.4
76emb|AL683839.9| Mouse DNA sequence from clone RP23-183N16 on chr... 40 7.4 
>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11,
             complete sequence
          Length = 102567

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 89/102 (87%)
 Strand = Plus / Plus

                                                                         
Query: 143   cacccttttatactcacagtggccaggccaccccgctcgcatgtatatatgccatcgtac 202
             |||| |||||||||  ||||  |||||||||||||  | ||||||| | |||||||||||
Sbjct: 93767 cacctttttatacttgcagtacccaggccaccccgtccacatgtatttttgccatcgtac 93826

                                                       
Query: 203   aacagcacaccaaagcttactcccccagactcacctccaagg 244
             ||||| ||||||| | ||||||||||||||||||||||||||
Sbjct: 93827 aacagtacaccaagggttactcccccagactcacctccaagg 93868



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                   
Query: 25    gaaactgcaagttctgcttcagaggaaagtagccatgctgagccagatggtaca 78
             ||||| |||||||| |  |||||||||||||| |||| ||||||||||||||||
Sbjct: 93645 gaaaccgcaagttcagtctcagaggaaagtagtcatgttgagccagatggtaca 93698



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                              
Query: 348   tgacatctccatttgacacaccaagtcaaacaggttagctttgatagct 396
             ||||||||||||||||  ||  |||||| ||||||||||| || |||||
Sbjct: 93969 tgacatctccatttgatgcaggaagtcacacaggttagctgtgctagct 94017
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 89/102 (87%)
 Strand = Plus / Plus

                                                                            
Query: 143      cacccttttatactcacagtggccaggccaccccgctcgcatgtatatatgccatcgtac 202
                |||| |||||||||  ||||  |||||||||||||  | ||||||| | |||||||||||
Sbjct: 19633868 cacctttttatacttgcagtacccaggccaccccgtccacatgtatttttgccatcgtac 19633927

                                                          
Query: 203      aacagcacaccaaagcttactcccccagactcacctccaagg 244
                ||||| ||||||| | ||||||||||||||||||||||||||
Sbjct: 19633928 aacagtacaccaagggttactcccccagactcacctccaagg 19633969



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                      
Query: 25       gaaactgcaagttctgcttcagaggaaagtagccatgctgagccagatggtaca 78
                ||||| |||||||| |  |||||||||||||| |||| ||||||||||||||||
Sbjct: 19633746 gaaaccgcaagttcagtctcagaggaaagtagtcatgttgagccagatggtaca 19633799



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                                 
Query: 348      tgacatctccatttgacacaccaagtcaaacaggttagctttgatagct 396
                ||||||||||||||||  ||  |||||| ||||||||||| || |||||
Sbjct: 19634070 tgacatctccatttgatgcaggaagtcacacaggttagctgtgctagct 19634118
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>dbj|AK062289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-E05, full
           insert sequence
          Length = 745

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 72/80 (90%)
 Strand = Plus / Plus

                                                                       
Query: 165 ccaggccaccccgctcgcatgtatatatgccatcgtacaacagcacaccaaagcttactc 224
           |||||||||||||  | ||||||| | |||||||||||||||| ||||||| | ||||||
Sbjct: 102 ccaggccaccccgtccacatgtatttttgccatcgtacaacagtacaccaagggttactc 161

                               
Query: 225 ccccagactcacctccaagg 244
           ||||||||||||||||||||
Sbjct: 162 ccccagactcacctccaagg 181



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                           
Query: 25 gaaactgcaagttctgcttcagaggaaagtagccatgctgagccagatg 73
          ||||| |||||||| |  |||||||||||||| |||| |||||||||||
Sbjct: 50 gaaaccgcaagttcagtctcagaggaaagtagtcatgttgagccagatg 98
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>gb|AY109843.1| Zea mays CL6204_1 mRNA sequence
          Length = 760

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                       
Query: 1   acttctaaatcatcacagttgtttgaaactgcaagttctgcttcagaggaaagtagccat 60
           ||||| |||||||||||| | |  |||||||| ||||| | ||||||||||| |||||| 
Sbjct: 687 acttccaaatcatcacagatttcagaaactgcgagttcagtttcagaggaaaatagccaa 628

                        
Query: 61  gctgagccagatg 73
           | ||| |||||||
Sbjct: 627 gttgaaccagatg 615



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 229 agactcacctccaaggggttatgcaccactctcaccaccaaggagacattcaatctc 285
           |||||||||||||||| |||||||| |  | ||||| || ||| |||||||||||||
Sbjct: 547 agactcacctccaaggcgttatgcatcggtatcaccgccgaggcgacattcaatctc 491



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 353 tctccatttgacacaccaagtcaaacagg 381
           |||||||||||| | ||||||||||||||
Sbjct: 432 tctccatttgaccctccaagtcaaacagg 404
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>gb|AC131330.25| Mus musculus chromosome 14, clone RP23-477H13, complete sequence
          Length = 166214

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 524   atttactctgcttaattatttgtgca 549
             |||||| |||||||||||||||||||
Sbjct: 27372 atttacactgcttaattatttgtgca 27397
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>gb|AC092156.2| Homo sapiens BAC clone RP11-326J14 from 2, complete sequence
          Length = 168610

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 405   tagtttatgttatctgtaaaat 426
             ||||||||||||||||||||||
Sbjct: 37475 tagtttatgttatctgtaaaat 37454
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>gb|AC154186.1| Mus musculus BAC clone RP24-435B3 from chromosome 14, complete sequence
          Length = 167900

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 524   atttactctgcttaattatttgtgca 549
             |||||| |||||||||||||||||||
Sbjct: 55714 atttacactgcttaattatttgtgca 55689
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>gb|AC098647.2| Homo sapiens chromosome 3 clone RP11-130G7, complete sequence
          Length = 159521

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 82    atttctcagttggttcacact 102
             |||||||||||||||||||||
Sbjct: 69837 atttctcagttggttcacact 69817



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 263   ccaccaaggagacattcaat 282
             ||||||||||||||||||||
Sbjct: 17683 ccaccaaggagacattcaat 17664
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>gb|AC099779.2| Homo sapiens chromosome 3 clone RP11-760G13, complete sequence
          Length = 198235

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 82     atttctcagttggttcacact 102
              |||||||||||||||||||||
Sbjct: 146428 atttctcagttggttcacact 146408



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 263   ccaccaaggagacattcaat 282
             ||||||||||||||||||||
Sbjct: 94271 ccaccaaggagacattcaat 94252
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>gb|AC174443.3| Mus musculus BAC clone RP24-298O17 from chromosome y, complete sequence
          Length = 164632

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 7     aaatcatcacagttgtttgaa 27
             |||||||||||||||||||||
Sbjct: 99441 aaatcatcacagttgtttgaa 99421
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>gb|AC175830.2| Mus musculus BAC clone RP24-74O10 from chromosome y, complete sequence
          Length = 206082

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 7     aaatcatcacagttgtttgaa 27
             |||||||||||||||||||||
Sbjct: 50298 aaatcatcacagttgtttgaa 50278
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>gb|AC061958.11|AC061958 Homo sapiens chromosome 3 clone RP11-6B7, complete sequence
          Length = 177717

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 406   agtttatgttatctgtaaaat 426
             |||||||||||||||||||||
Sbjct: 82413 agtttatgttatctgtaaaat 82393
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>gb|AY752846.1| Culicoides sonorensis clone CsTRY1_049 serine protease mRNA,
           partial cds
          Length = 889

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 508 tcgtaaatcatcaattattta 528
           |||||||||||||||||||||
Sbjct: 294 tcgtaaatcatcaattattta 314
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>gb|AC006344.2|AC006344 Homo sapiens PAC clone RP4-726N20 from 7q32-q34, complete sequence
          Length = 127447

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 444   ttattttgcactagaaatttg 464
             |||||||||||||||||||||
Sbjct: 19389 ttattttgcactagaaatttg 19369
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>ref|XM_473197.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1086

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 ctcgcatgtatatatgccat 197
           ||||||||||||||||||||
Sbjct: 620 ctcgcatgtatatatgccat 639
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>gb|AC091787.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0087G11,
              complete sequence
          Length = 169728

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    cgctcgcatgtatatatgcc 195
              ||||||||||||||||||||
Sbjct: 131063 cgctcgcatgtatatatgcc 131044
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 176      cgctcgcatgtatatatgcc 195
                ||||||||||||||||||||
Sbjct: 15919354 cgctcgcatgtatatatgcc 15919373
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>emb|CR318609.7| Zebrafish DNA sequence from clone DKEY-95L14 in linkage group 19,
             complete sequence
          Length = 75965

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   attcaacagataacaccctt 149
             ||||||||||||||||||||
Sbjct: 44545 attcaacagataacaccctt 44564
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>gb|AC124469.4| Mus musculus BAC clone RP24-172B22 from chromosome 1, complete sequence
          Length = 162294

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 210    caccaaagcttactccccca 229
              ||||||||||||||||||||
Sbjct: 107074 caccaaagcttactccccca 107055
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>gb|AC140139.2| Homo sapiens chromosome 5 clone RP11-1417I21, complete sequence
          Length = 216245

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 408  tttatgttatctgtaaaatatgaa 431
            |||||||||||||| |||||||||
Sbjct: 4405 tttatgttatctgttaaatatgaa 4428
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>gb|AC138866.2| Homo sapiens chromosome 5 clone RP11-1415C14, complete sequence
          Length = 213824

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 408   tttatgttatctgtaaaatatgaa 431
             |||||||||||||| |||||||||
Sbjct: 70313 tttatgttatctgttaaatatgaa 70336
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>gb|AC146949.1| Homo sapiens chromosome 5 clone RP11-1198D22, complete sequence
          Length = 205574

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 408    tttatgttatctgtaaaatatgaa 431
              |||||||||||||| |||||||||
Sbjct: 134683 tttatgttatctgttaaatatgaa 134660
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>gb|AC145138.2| Homo sapiens chromosome 5 clone RP11-1280N14, complete sequence
          Length = 199372

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 408    tttatgttatctgtaaaatatgaa 431
              |||||||||||||| |||||||||
Sbjct: 188355 tttatgttatctgttaaatatgaa 188378
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>gb|AC145144.2| Homo sapiens chromosome 5 clone RP11-1432L1, complete sequence
          Length = 211638

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 408    tttatgttatctgtaaaatatgaa 431
              |||||||||||||| |||||||||
Sbjct: 143394 tttatgttatctgttaaatatgaa 143371
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>gb|AC139510.3| Homo sapiens chromosome 5 clone RP11-977J23, complete sequence
          Length = 179309

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 408    tttatgttatctgtaaaatatgaa 431
              |||||||||||||| |||||||||
Sbjct: 110195 tttatgttatctgttaaatatgaa 110172
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>emb|CR628344.5| Zebrafish DNA sequence from clone DKEY-217K23 in linkage group 14,
             complete sequence
          Length = 28008

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   attcaacagataacaccctt 149
             ||||||||||||||||||||
Sbjct: 12769 attcaacagataacaccctt 12750
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>emb|AL662918.7| Human DNA sequence from clone RP11-176B3 on chromosome 1, complete
            sequence
          Length = 90140

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 458  aaatttgtaatgaatgaata 477
            ||||||||||||||||||||
Sbjct: 5925 aaatttgtaatgaatgaata 5944
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>emb|AL596065.3| Human DNA sequence from clone RP11-187B2 on chromosome 6 Contains a
           CpG island, complete sequence
          Length = 15377

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 408 tttatgttatctgtaaaatatgaa 431
           |||||||||||||| |||||||||
Sbjct: 537 tttatgttatctgttaaatatgaa 560
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>gb|AC146335.1| Homo sapiens chromosome 5 clone RP11-1305N21, complete sequence
          Length = 194399

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 408   tttatgttatctgtaaaatatgaa 431
             |||||||||||||| |||||||||
Sbjct: 16629 tttatgttatctgttaaatatgaa 16606
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>gb|AC139277.2| Homo sapiens chromosome 5 clone RP11-619K7, complete sequence
          Length = 199996

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 408   tttatgttatctgtaaaatatgaa 431
             |||||||||||||| |||||||||
Sbjct: 82696 tttatgttatctgttaaatatgaa 82673
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>gb|AC138911.2| Homo sapiens chromosome 5 clone RP11-618O22, complete sequence
          Length = 191992

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 408   tttatgttatctgtaaaatatgaa 431
             |||||||||||||| |||||||||
Sbjct: 48260 tttatgttatctgttaaatatgaa 48283
to top
>emb|AL136971.7| Human DNA sequence from clone RP3-322A2 on chromosome 6 Contains part
             of the ANKRD6 gene for ankyrin repeat domain 6 (KIAA0957),
             complete sequence
          Length = 82601

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 524   atttactctgcttaattatt 543
             ||||||||||||||||||||
Sbjct: 24294 atttactctgcttaattatt 24313
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>gb|AC132802.2| Homo sapiens chromosome 5 clone CTC-273M15, complete sequence
          Length = 162703

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 408   tttatgttatctgtaaaatatgaa 431
             |||||||||||||| |||||||||
Sbjct: 55092 tttatgttatctgttaaatatgaa 55115
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>emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073E02,
              complete sequence
          Length = 139080

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 178    ctcgcatgtatatatgccat 197
              ||||||||||||||||||||
Sbjct: 132058 ctcgcatgtatatatgccat 132077
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>emb|BX088646.21| Zebrafish DNA sequence from clone DKEY-42F19 in linkage group 14,
              complete sequence
          Length = 235682

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    attcaacagataacaccctt 149
              ||||||||||||||||||||
Sbjct: 146783 attcaacagataacaccctt 146802
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>gb|AC026898.8| Homo sapiens chromosome 18, clone RP11-767C4, complete sequence
          Length = 187295

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 361    tgacacaccaagtcaaacag 380
              ||||||||||||||||||||
Sbjct: 146931 tgacacaccaagtcaaacag 146950
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>emb|BX908780.7| Zebrafish DNA sequence from clone CH211-198K9 in linkage group 1,
             complete sequence
          Length = 199679

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   attcaacagataacaccctt 149
             ||||||||||||||||||||
Sbjct: 29413 attcaacagataacaccctt 29394
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>emb|AL662785.5| Mouse DNA sequence from clone RP23-186N7 on chromosome 11, complete
             sequence
          Length = 158968

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 530   tctgcttaattatttgtgca 549
             ||||||||||||||||||||
Sbjct: 46565 tctgcttaattatttgtgca 46584
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>emb|BX511252.17| Zebrafish DNA sequence from clone CH211-240E14 in linkage group 16,
              complete sequence
          Length = 137574

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    attcaacagataacaccctt 149
              ||||||||||||||||||||
Sbjct: 104305 attcaacagataacaccctt 104324
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>emb|BX322584.16| Zebrafish DNA sequence from clone RP71-27M6 in linkage group 14,
            complete sequence
          Length = 144727

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 130  attcaacagataacaccctt 149
            ||||||||||||||||||||
Sbjct: 8361 attcaacagataacaccctt 8380
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>gb|AC182492.2| Pan troglodytes BAC clone CH251-294F23 from chromosome 5, complete
              sequence
          Length = 179551

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 408    tttatgttatctgtaaaatatgaa 431
              |||||||||||||| |||||||||
Sbjct: 142172 tttatgttatctgttaaatatgaa 142149
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>emb|BX323600.8| Zebrafish DNA sequence from clone CH211-234C2 in linkage group 14,
             complete sequence
          Length = 100795

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   attcaacagataacaccctt 149
             ||||||||||||||||||||
Sbjct: 47354 attcaacagataacaccctt 47335
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>dbj|AK095318.1| Homo sapiens cDNA FLJ37999 fis, clone CTONG2012029
          Length = 3610

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 416  atctgtaaaatatgaacacc 435
            ||||||||||||||||||||
Sbjct: 3334 atctgtaaaatatgaacacc 3315
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>gb|AC063953.13| Homo sapiens 3 BAC RP11-317I15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 185259

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 454    ctagaaatttgtaatgaatg 473
              ||||||||||||||||||||
Sbjct: 115373 ctagaaatttgtaatgaatg 115354
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>gb|AC004673.1| Homo sapiens X BAC GSHB-590J15 (Genome Systems Human BAC library)
             complete sequence
          Length = 236281

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 404   ttagtttatgttatctgtaaaata 427
             |||| |||||||||||||||||||
Sbjct: 35522 ttagattatgttatctgtaaaata 35545
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>gb|AC107624.1| Homo sapiens chromosome 3 clone RP11-744H21, complete sequence
          Length = 170282

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 263  ccaccaaggagacattcaat 282
            ||||||||||||||||||||
Sbjct: 5576 ccaccaaggagacattcaat 5595
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>gb|AC104066.3| Homo sapiens BAC clone RP11-177B4 from 4, complete sequence
          Length = 128474

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 416   atctgtaaaatatgaacacc 435
             ||||||||||||||||||||
Sbjct: 80829 atctgtaaaatatgaacacc 80848
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>emb|BX510367.7| Zebrafish DNA sequence from clone DKEY-117M4 in linkage group 5,
             complete sequence
          Length = 107878

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   attcaacagataacaccctt 149
             ||||||||||||||||||||
Sbjct: 40964 attcaacagataacaccctt 40945
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>gb|AC153137.4| Mus musculus BAC clone RP23-471J16 from chromosome 1, complete sequence
          Length = 201668

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   caccaaagcttactccccca 229
             ||||||||||||||||||||
Sbjct: 18922 caccaaagcttactccccca 18903
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>gb|AC027345.5| Homo sapiens chromosome 5 clone CTD-2345H1, complete sequence
          Length = 132599

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 408    tttatgttatctgtaaaatatgaa 431
              |||||||||||||| |||||||||
Sbjct: 101614 tttatgttatctgttaaatatgaa 101591
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>gb|AC010217.6| Homo sapiens chromosome 5 clone CTC-202F24, complete sequence
          Length = 169137

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 408    tttatgttatctgtaaaatatgaa 431
              |||||||||||||| |||||||||
Sbjct: 164765 tttatgttatctgttaaatatgaa 164788
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>gb|AC010237.8|AC010237 Homo sapiens chromosome 5 clone CTC-348J20, complete sequence
          Length = 168814

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 408   tttatgttatctgtaaaatatgaa 431
             |||||||||||||| |||||||||
Sbjct: 69070 tttatgttatctgttaaatatgaa 69047
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>gb|AC022119.4|AC022119 Homo sapiens chromosome 5 clone CTC-566F17, complete sequence
          Length = 155974

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 408    tttatgttatctgtaaaatatgaa 431
              |||||||||||||| |||||||||
Sbjct: 151602 tttatgttatctgttaaatatgaa 151625
to top
>emb|BX088698.22| Mouse DNA sequence from clone RP23-309D15 on chromosome X, complete
              sequence
          Length = 184201

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 202    caacagcacaccaaagcttactcc 225
              ||||||||||||| ||||||||||
Sbjct: 175140 caacagcacaccagagcttactcc 175163
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>gb|AC023118.4|AC023118 Homo sapiens BAC clone RP11-277L22 from 11, complete sequence
          Length = 154330

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    ttctgcttcagaggaaagta 55
             ||||||||||||||||||||
Sbjct: 29346 ttctgcttcagaggaaagta 29327
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>gb|AF137023.1|AF137023 Wollastonia biflora methionine S-methyltransferase mRNA, complete cds
          Length = 3646

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 334  taaccatagctccatgacat 353
            ||||||||||||||||||||
Sbjct: 3424 taaccatagctccatgacat 3405
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 178      ctcgcatgtatatatgccat 197
                ||||||||||||||||||||
Sbjct: 25914648 ctcgcatgtatatatgccat 25914667
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 291      cgtcaatgaacaggctcgat 310
                ||||||||||||||||||||
Sbjct: 27084306 cgtcaatgaacaggctcgat 27084325
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>gb|AC139500.2| Homo sapiens chromosome 5 clone RP11-864E4, complete sequence
          Length = 194350

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 408  tttatgttatctgtaaaatatgaa 431
            |||||||||||||| |||||||||
Sbjct: 5846 tttatgttatctgttaaatatgaa 5869
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 176      cgctcgcatgtatatatgcc 195
                ||||||||||||||||||||
Sbjct: 15913888 cgctcgcatgtatatatgcc 15913907
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>gb|AC139834.2| Homo sapiens chromosome 5 clone RP11-974F13, complete sequence
          Length = 185457

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 408   tttatgttatctgtaaaatatgaa 431
             |||||||||||||| |||||||||
Sbjct: 51350 tttatgttatctgttaaatatgaa 51327
to top
>gb|AC140175.2| Homo sapiens chromosome 5 clone RP11-833G1, complete sequence
          Length = 161671

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 408   tttatgttatctgtaaaatatgaa 431
             |||||||||||||| |||||||||
Sbjct: 17929 tttatgttatctgttaaatatgaa 17952
to top
>gb|AC149155.3| Xenopus tropicalis clone ISB-242B17, complete sequence
          Length = 94528

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 444  ttattttgcactagaaattt 463
            ||||||||||||||||||||
Sbjct: 5160 ttattttgcactagaaattt 5179
to top
>gb|AC138951.2| Homo sapiens chromosome 5 clone RP11-823P9, complete sequence
          Length = 223346

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 408   tttatgttatctgtaaaatatgaa 431
             |||||||||||||| |||||||||
Sbjct: 21954 tttatgttatctgttaaatatgaa 21977
to top
>gb|AC118459.2| Homo sapiens chromosome 5 clone RP11-124L9, complete sequence
          Length = 146061

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 408   tttatgttatctgtaaaatatgaa 431
             |||||||||||||| |||||||||
Sbjct: 82067 tttatgttatctgttaaatatgaa 82044
to top
>gb|AC093308.4| Homo sapiens chromosome 5 clone RP11-96B3, complete sequence
          Length = 151635

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 408   tttatgttatctgtaaaatatgaa 431
             |||||||||||||| |||||||||
Sbjct: 29686 tttatgttatctgttaaatatgaa 29709
to top
>gb|AC131392.2| Homo sapiens chromosome 5 clone RP11-98J23, complete sequence
          Length = 154803

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 408  tttatgttatctgtaaaatatgaa 431
            |||||||||||||| |||||||||
Sbjct: 6405 tttatgttatctgttaaatatgaa 6428
to top
>dbj|AP004272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0427D10
          Length = 154192

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 291   cgtcaatgaacaggctcgat 310
             ||||||||||||||||||||
Sbjct: 87547 cgtcaatgaacaggctcgat 87566
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>emb|CR735122.6| Zebrafish DNA sequence from clone CH211-111N6 in linkage group 22,
            complete sequence
          Length = 12563

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 130  attcaacagataacaccctt 149
            ||||||||||||||||||||
Sbjct: 2895 attcaacagataacaccctt 2876
to top
>emb|BX649294.7| Zebrafish DNA sequence from clone CH211-223C9 in linkage group 22,
             complete sequence
          Length = 209223

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   attcaacagataacaccctt 149
             ||||||||||||||||||||
Sbjct: 60161 attcaacagataacaccctt 60180
to top
>emb|AL928920.5| Zebrafish DNA sequence from clone DKEY-14A7 in linkage group 20,
             complete sequence
          Length = 195351

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   attcaacagataacaccctt 149
             ||||||||||||||||||||
Sbjct: 48631 attcaacagataacaccctt 48650
to top
>emb|AL953847.13| Zebrafish DNA sequence from clone CH211-255A4 in linkage group 3,
              complete sequence
          Length = 144933

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 130    attcaacagataacaccctt 149
              ||||||||||||||||||||
Sbjct: 125533 attcaacagataacaccctt 125514
to top
>emb|AL954768.7| Zebrafish DNA sequence from clone CH211-254L23 in linkage group 12,
             complete sequence
          Length = 159442

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   attcaacagataacaccctt 149
             ||||||||||||||||||||
Sbjct: 17658 attcaacagataacaccctt 17639
to top
>emb|AL731629.2|OSJN00274 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0061C13,
             complete sequence
          Length = 139226

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   ctcgcatgtatatatgccat 197
             ||||||||||||||||||||
Sbjct: 40910 ctcgcatgtatatatgccat 40929
to top
>gb|AC124747.3| Mus musculus BAC clone RP23-243O9 from 12, complete sequence
          Length = 208779

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 74     gtacactcatttctcagttggttc 97
              |||||||||| |||||||||||||
Sbjct: 182181 gtacactcatgtctcagttggttc 182204
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>emb|AL683839.9| Mouse DNA sequence from clone RP23-183N16 on chromosome 2, complete
              sequence
          Length = 233086

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 463    tgtaatgaatgaatacagcgtgat 486
              |||||||||| |||||||||||||
Sbjct: 204995 tgtaatgaataaatacagcgtgat 205018


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,600,281
Number of Sequences: 3902068
Number of extensions: 5600281
Number of successful extensions: 101282
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101001
Number of HSP's gapped (non-prelim): 280
length of query: 549
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 526
effective length of database: 17,143,297,704
effective search space: 9017374592304
effective search space used: 9017374592304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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