ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags20a22 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_475890.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1623 Score = 545 bits (275), Expect = e-152 Identities = 408/451 (90%), Gaps = 1/451 (0%) Strand = Plus / Plus Query: 27 gaatacaagcatctcgctcataggatgggatcagaacatttagcaaagagtctgtcgaag 86 ||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 805 gaatacaagcaccttgctcataggatgggatcagaacatttagcaaagagtctctcgaag 864 Query: 87 catttggagtctgttattaaatcaagaatcccgggtctccagtctcttataacaaagaca 146 ||||||||| |||||||||| ||||||||||| || ||||| ||||| || ||||||||| Sbjct: 865 catttggagactgttattaagtcaagaatcccagggctccaatctctcattacaaagaca 924 Query: 147 gttgcagagctggaaactgaactttctcgtcttggaaagcccatcgctaatgatgctgga 206 |||| || ||||| || |||||| ||| ||||| |||||||| |||| ||||||||| Sbjct: 925 attgccgaactggagacagaacttaatcgacttgggaagcccattgctacagatgctgga 984 Query: 207 ggaaagctgtacacgattatggaaatatgccgcatgtttgatggcatctacaaagagcat 266 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 985 ggaaagctgtacacgatcatggaaatatgccgcatgtttgatggtatctacaaagaacat 1044 Query: 267 ctggatggagtgcgccctggtggtgagaaaatttaccatgtatttgacaatcagtttcct 326 |||||||||||||| ||||||||||||||||| || ||||| |||||||||||||||||| Sbjct: 1045 ctggatggagtgcgtcctggtggtgagaaaatctatcatgtctttgacaatcagtttcct 1104 Query: 327 gtggcaattaaacggttgcagtttgataagcaactgtcaatggaaaatgtgaggaagctc 386 || || |||||||||||||||||||| || |||||| ||||||||||||||| |||||| Sbjct: 1105 gtagccattaaacggttgcagtttgacaaacaactggcaatggaaaatgtgaaaaagctc 1164 Query: 387 ataacggaagctgatggataccagccctcacttgatagctccagagcaaggatatcgacg 446 |||||||| |||||||||||||| ||||| || |||||||||||||||||||||||||| Sbjct: 1165 ataacggaggctgatggatacca-acctcatttaatagctccagagcaaggatatcgacg 1223 Query: 447 cctcatagaatcttgtcttgttagtatcaga 477 |||||||| ||||||||||||||||||||| Sbjct: 1224 gctcatagagtcttgtcttgttagtatcaga 1254
>dbj|AK065908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045L08, full insert sequence Length = 2303 Score = 545 bits (275), Expect = e-152 Identities = 408/451 (90%), Gaps = 1/451 (0%) Strand = Plus / Plus Query: 27 gaatacaagcatctcgctcataggatgggatcagaacatttagcaaagagtctgtcgaag 86 ||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 992 gaatacaagcaccttgctcataggatgggatcagaacatttagcaaagagtctctcgaag 1051 Query: 87 catttggagtctgttattaaatcaagaatcccgggtctccagtctcttataacaaagaca 146 ||||||||| |||||||||| ||||||||||| || ||||| ||||| || ||||||||| Sbjct: 1052 catttggagactgttattaagtcaagaatcccagggctccaatctctcattacaaagaca 1111 Query: 147 gttgcagagctggaaactgaactttctcgtcttggaaagcccatcgctaatgatgctgga 206 |||| || ||||| || |||||| ||| ||||| |||||||| |||| ||||||||| Sbjct: 1112 attgccgaactggagacagaacttaatcgacttgggaagcccattgctacagatgctgga 1171 Query: 207 ggaaagctgtacacgattatggaaatatgccgcatgtttgatggcatctacaaagagcat 266 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 1172 ggaaagctgtacacgatcatggaaatatgccgcatgtttgatggtatctacaaagaacat 1231 Query: 267 ctggatggagtgcgccctggtggtgagaaaatttaccatgtatttgacaatcagtttcct 326 |||||||||||||| ||||||||||||||||| || ||||| |||||||||||||||||| Sbjct: 1232 ctggatggagtgcgtcctggtggtgagaaaatctatcatgtctttgacaatcagtttcct 1291 Query: 327 gtggcaattaaacggttgcagtttgataagcaactgtcaatggaaaatgtgaggaagctc 386 || || |||||||||||||||||||| || |||||| ||||||||||||||| |||||| Sbjct: 1292 gtagccattaaacggttgcagtttgacaaacaactggcaatggaaaatgtgaaaaagctc 1351 Query: 387 ataacggaagctgatggataccagccctcacttgatagctccagagcaaggatatcgacg 446 |||||||| |||||||||||||| ||||| || |||||||||||||||||||||||||| Sbjct: 1352 ataacggaggctgatggatacca-acctcatttaatagctccagagcaaggatatcgacg 1410 Query: 447 cctcatagaatcttgtcttgttagtatcaga 477 |||||||| ||||||||||||||||||||| Sbjct: 1411 gctcatagagtcttgtcttgttagtatcaga 1441
>gb|AY104344.1| Zea mays PCO082748 mRNA sequence Length = 1812 Score = 458 bits (231), Expect = e-126 Identities = 382/431 (88%), Gaps = 1/431 (0%) Strand = Plus / Plus Query: 47 taggatgggatcagaacatttagcaaagagtctgtcgaagcatttggagtctgttattaa 106 |||||||||||| ||| |||||| ||||| || || ||||||||||| || || || Sbjct: 553 taggatgggatctgaatatttaggaaagatgctttcaaagcatttggaacaagtgatcaa 612 Query: 107 atcaagaatcccgggtctccagtctcttataacaaagacagttgcagagctggaaactga 166 |||||| || ||||| |||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 613 atcaaggattccggggatccaatctcttataacaaagacaattgcagagctggaaactga 672 Query: 167 actttctcgtcttggaaagcccatcgctaatgatgctggaggaaagctgtacacgattat 226 |||| |||||||||||| ||||| |||||||||||||| || |||||||||||||| || Sbjct: 673 acttaatcgtcttggaaaacccattgctaatgatgctggggggaagctgtacacgatcat 732 Query: 227 ggaaatatgccgcatgtttgatggcatctacaaagagcatctggatggagtgcgccctgg 286 |||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 733 ggaaatatgccgtatgtttgatggtatttacaaagagcatctggatggagtgcgccctgg 792 Query: 287 tggtgagaaaatttaccatgtatttgacaatcagtttcctgtggcaattaaacggttgca 346 || |||||| |||||||||| || |||||||| |||||||| || |||||||| ||||| Sbjct: 793 cggagagaaagtttaccatgtcttcgacaatcaatttcctgtagctattaaacgattgca 852 Query: 347 gtttgataagcaactgtcaatggaaaatgtgaggaagctcataacggaagctgatggata 406 ||||||||| ||||| || |||||||||||||||||||| ||||| || ||||||||||| Sbjct: 853 gtttgataaacaactctctatggaaaatgtgaggaagcttataacagaggctgatggata 912 Query: 407 ccagccctcacttgatagctccagagcaaggatatcgacgcctcatagaatcttgtcttg 466 |||| |||||||||||||||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 913 ccag-cctcacttgatagctccagaacaaggatatagacgccttatagaatcttgtctta 971 Query: 467 ttagtatcaga 477 ||||||||||| Sbjct: 972 ttagtatcaga 982
>gb|BT017132.1| Zea mays clone EL01N0365G02.c mRNA sequence Length = 1266 Score = 438 bits (221), Expect = e-120 Identities = 336/373 (90%), Gaps = 1/373 (0%) Strand = Plus / Plus Query: 105 aaatcaagaatcccgggtctccagtctcttataacaaagacagttgcagagctggaaact 164 |||||||| || ||||| |||| |||||||||||||||||| ||||||||||||||||| Sbjct: 83 aaatcaaggattccggggatccaatctcttataacaaagacaattgcagagctggaaact 142 Query: 165 gaactttctcgtcttggaaagcccatcgctaatgatgctggaggaaagctgtacacgatt 224 |||||| ||| |||||||| ||||| |||||||||||||| || |||||||||||||| Sbjct: 143 gaacttaatcggcttggaaaacccattgctaatgatgctggggggaagctgtacacgatc 202 Query: 225 atggaaatatgccgcatgtttgatggcatctacaaagagcatctggatggagtgcgccct 284 |||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 203 atggaaatatgccgtatgtttgatggtatttacaaagagcatctggatggagtgcgccct 262 Query: 285 ggtggtgagaaaatttaccatgtatttgacaatcagtttcctgtggcaattaaacggttg 344 || || |||||| |||||||||| || |||||||| |||||||| || |||||||| ||| Sbjct: 263 ggcggagagaaagtttaccatgtcttcgacaatcaatttcctgtagctattaaacgattg 322 Query: 345 cagtttgataagcaactgtcaatggaaaatgtgaggaagctcataacggaagctgatgga 404 ||||||||||| ||||| || |||||||||||||||||||| ||||| || ||||||||| Sbjct: 323 cagtttgataaacaactctctatggaaaatgtgaggaagcttataacagaggctgatgga 382 Query: 405 taccagccctcacttgatagctccagagcaaggatatcgacgcctcatagaatcttgtct 464 |||||| |||||||||||||||||||| ||||||||| ||||||| |||||||||||||| Sbjct: 383 taccag-cctcacttgatagctccagaacaaggatatagacgccttatagaatcttgtct 441 Query: 465 tgttagtatcaga 477 | ||||||||||| Sbjct: 442 tattagtatcaga 454
>ref|NM_192052.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1935 Score = 285 bits (144), Expect = 6e-74 Identities = 312/368 (84%) Strand = Plus / Plus Query: 42 gctcataggatgggatcagaacatttagcaaagagtctgtcgaagcatttggagtctgtt 101 |||||||| ||||||||||| || |||||||||| || || || |||||||| ||||| Sbjct: 886 gctcatagaatgggatcagagcacttagcaaagatgctttcaaaacatttggaatctgtg 945 Query: 102 attaaatcaagaatcccgggtctccagtctcttataacaaagacagttgcagagctggaa 161 |||||||||||||| || || |||| |||||||||| ||| || |||||||||| ||| Sbjct: 946 attaaatcaagaattccagggatccaatctcttataagcaaggcaattgcagagctagaa 1005 Query: 162 actgaactttctcgtcttggaaagcccatcgctaatgatgctggaggaaagctgtacacg 221 |||||||| |||||| ||||| || || ||| ||||| |||||||| ||||||| Sbjct: 1006 gctgaacttcatcgtctcggaaaacctattgctgcagatgccggaggaaaattgtacaca 1065 Query: 222 attatggaaatatgccgcatgtttgatggcatctacaaagagcatctggatggagtgcgc 281 ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||| Sbjct: 1066 attatggaaatatgccgcatgttcgatggtatctacaaggagcatctggatggaatgcgc 1125 Query: 282 cctggtggtgagaaaatttaccatgtatttgacaatcagtttcctgtggcaattaaacgg 341 || ||||| |||||||| ||| |||||||||||||||| ||||| || || | ||||| Sbjct: 1126 ccaggtggcgagaaaatctactatgtatttgacaatcaatttccggttgctctcaaacga 1185 Query: 342 ttgcagtttgataagcaactgtcaatggaaaatgtgaggaagctcataacggaagctgat 401 ||||||||||||||| | || |||||||||||||| |||||||| ||||| |||||||| Sbjct: 1186 ttgcagtttgataagaatctttcaatggaaaatgtaaggaagcttataacacaagctgat 1245 Query: 402 ggatacca 409 |||||||| Sbjct: 1246 ggatacca 1253
>dbj|AK072230.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002D21, full insert sequence Length = 2691 Score = 278 bits (140), Expect = 2e-71 Identities = 311/368 (84%) Strand = Plus / Plus Query: 42 gctcataggatgggatcagaacatttagcaaagagtctgtcgaagcatttggagtctgtt 101 |||||||| ||||||||||| || |||| ||||| || || || |||||||| ||||| Sbjct: 1527 gctcatagaatgggatcagagcacttagtaaagatgctttcaaaacatttggaatctgtg 1586 Query: 102 attaaatcaagaatcccgggtctccagtctcttataacaaagacagttgcagagctggaa 161 |||||||||||||| || || |||| |||||||||| ||| || |||||||||| ||| Sbjct: 1587 attaaatcaagaattccagggatccaatctcttataagcaaggcaattgcagagctagaa 1646 Query: 162 actgaactttctcgtcttggaaagcccatcgctaatgatgctggaggaaagctgtacacg 221 |||||||| |||||| ||||| || || ||| ||||| |||||||| ||||||| Sbjct: 1647 gctgaacttcatcgtctcggaaaacctattgctgcagatgccggaggaaaattgtacaca 1706 Query: 222 attatggaaatatgccgcatgtttgatggcatctacaaagagcatctggatggagtgcgc 281 ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||| Sbjct: 1707 attatggaaatatgccgcatgttcgatggtatctacaaggagcatctggatggaatgcgc 1766 Query: 282 cctggtggtgagaaaatttaccatgtatttgacaatcagtttcctgtggcaattaaacgg 341 || ||||| |||||||| ||| |||||||||||||||| ||||| || || | ||||| Sbjct: 1767 ccaggtggcgagaaaatctactatgtatttgacaatcaatttccggttgctctcaaacga 1826 Query: 342 ttgcagtttgataagcaactgtcaatggaaaatgtgaggaagctcataacggaagctgat 401 ||||||||||||||| | || |||||||||||||| |||||||| ||||| |||||||| Sbjct: 1827 ttgcagtttgataagaatctttcaatggaaaatgtaaggaagcttataacacaagctgat 1886 Query: 402 ggatacca 409 |||||||| Sbjct: 1887 ggatacca 1894
>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03, complete sequence Length = 144601 Score = 246 bits (124), Expect = 6e-62 Identities = 179/196 (91%), Gaps = 1/196 (0%) Strand = Plus / Minus Query: 282 cctggtggtgagaaaatttaccatgtatttgacaatcagtttcctgtggcaattaaacgg 341 ||||||||||||||||| || ||||| |||||||||||||||||||| || ||||||||| Sbjct: 25762 cctggtggtgagaaaatctatcatgtctttgacaatcagtttcctgtagccattaaacgg 25703 Query: 342 ttgcagtttgataagcaactgtcaatggaaaatgtgaggaagctcataacggaagctgat 401 ||||||||||| || |||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 25702 ttgcagtttgacaaacaactggcaatggaaaatgtgaaaaagctcataacggaggctgat 25643 Query: 402 ggataccagccctcacttgatagctccagagcaaggatatcgacgcctcatagaatcttg 461 |||||||| ||||| || |||||||||||||||||||||||||| |||||||| ||||| Sbjct: 25642 ggatacca-acctcatttaatagctccagagcaaggatatcgacggctcatagagtcttg 25584 Query: 462 tcttgttagtatcaga 477 |||||||||||||||| Sbjct: 25583 tcttgttagtatcaga 25568 Score = 119 bits (60), Expect = 9e-24 Identities = 69/72 (95%) Strand = Plus / Minus Query: 207 ggaaagctgtacacgattatggaaatatgccgcatgtttgatggcatctacaaagagcat 266 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 26430 ggaaagctgtacacgatcatggaaatatgccgcatgtttgatggtatctacaaagaacat 26371 Query: 267 ctggatggagtg 278 |||||||||||| Sbjct: 26370 ctggatggagtg 26359 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Minus Query: 27 gaatacaagcatctcgctcataggatgggatcagaacatttagcaaagagtctgtcgaag 86 ||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 26860 gaatacaagcaccttgctcataggatgggatcagaacatttagcaaagagtctctcgaag 26801 Score = 93.7 bits (47), Expect = 5e-16 Identities = 104/123 (84%) Strand = Plus / Minus Query: 85 agcatttggagtctgttattaaatcaagaatcccgggtctccagtctcttataacaaaga 144 ||||||||||| |||||||||| ||||||||||| || ||||| ||||| || ||||||| Sbjct: 26717 agcatttggagactgttattaagtcaagaatcccagggctccaatctctcattacaaaga 26658 Query: 145 cagttgcagagctggaaactgaactttctcgtcttggaaagcccatcgctaatgatgctg 204 || |||| || ||||| || |||||| ||| ||||| |||||||| |||| ||||||| Sbjct: 26657 caattgccgaactggagacagaacttaatcgacttgggaagcccattgctacagatgctg 26598 Query: 205 gag 207 ||| Sbjct: 26597 gag 26595
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 246 bits (124), Expect = 6e-62 Identities = 179/196 (91%), Gaps = 1/196 (0%) Strand = Plus / Minus Query: 282 cctggtggtgagaaaatttaccatgtatttgacaatcagtttcctgtggcaattaaacgg 341 ||||||||||||||||| || ||||| |||||||||||||||||||| || ||||||||| Sbjct: 27429632 cctggtggtgagaaaatctatcatgtctttgacaatcagtttcctgtagccattaaacgg 27429573 Query: 342 ttgcagtttgataagcaactgtcaatggaaaatgtgaggaagctcataacggaagctgat 401 ||||||||||| || |||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 27429572 ttgcagtttgacaaacaactggcaatggaaaatgtgaaaaagctcataacggaggctgat 27429513 Query: 402 ggataccagccctcacttgatagctccagagcaaggatatcgacgcctcatagaatcttg 461 |||||||| ||||| || |||||||||||||||||||||||||| |||||||| ||||| Sbjct: 27429512 ggatacca-acctcatttaatagctccagagcaaggatatcgacggctcatagagtcttg 27429454 Query: 462 tcttgttagtatcaga 477 |||||||||||||||| Sbjct: 27429453 tcttgttagtatcaga 27429438 Score = 119 bits (60), Expect = 9e-24 Identities = 69/72 (95%) Strand = Plus / Minus Query: 207 ggaaagctgtacacgattatggaaatatgccgcatgtttgatggcatctacaaagagcat 266 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 27430300 ggaaagctgtacacgatcatggaaatatgccgcatgtttgatggtatctacaaagaacat 27430241 Query: 267 ctggatggagtg 278 |||||||||||| Sbjct: 27430240 ctggatggagtg 27430229 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Minus Query: 27 gaatacaagcatctcgctcataggatgggatcagaacatttagcaaagagtctgtcgaag 86 ||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 27430730 gaatacaagcaccttgctcataggatgggatcagaacatttagcaaagagtctctcgaag 27430671 Score = 93.7 bits (47), Expect = 5e-16 Identities = 104/123 (84%) Strand = Plus / Minus Query: 85 agcatttggagtctgttattaaatcaagaatcccgggtctccagtctcttataacaaaga 144 ||||||||||| |||||||||| ||||||||||| || ||||| ||||| || ||||||| Sbjct: 27430587 agcatttggagactgttattaagtcaagaatcccagggctccaatctctcattacaaaga 27430528 Query: 145 cagttgcagagctggaaactgaactttctcgtcttggaaagcccatcgctaatgatgctg 204 || |||| || ||||| || |||||| ||| ||||| |||||||| |||| ||||||| Sbjct: 27430527 caattgccgaactggagacagaacttaatcgacttgggaagcccattgctacagatgctg 27430468 Query: 205 gag 207 ||| Sbjct: 27430467 gag 27430465
>emb|AJ244024.1|NTA244024 Nicotiana tabacum mRNA for phragmoplastin, dynamin-like protein Length = 2193 Score = 163 bits (82), Expect = 6e-37 Identities = 287/354 (81%), Gaps = 1/354 (0%) Strand = Plus / Plus Query: 90 ttggagtctgttattaaatcaagaatcccgggtctccagtctcttataacaaagacagtt 149 |||||||||||||| || |||||||| || ||||| ||||||||||| | ||||| | Sbjct: 981 ttggagtctgttatcaagtcaagaattccaggtcttcagtctcttatcagcaagaccatc 1040 Query: 150 gcagagctggaaactgaactttctcgtcttggaaagcccatcgctaatgatgctggagga 209 ||||| ||||||||| | |||||||| |||||||| || | |||||||||||| Sbjct: 1041 attgagctagaaactgaattgagccgtcttgggaagcccattgcgacagatgctggagga 1100 Query: 210 aagctgtacacgattatggaaatatgccgcatgtttgatggcatctacaaagagcatctg 269 |||||||||| |||||||||| | || || | |||||||| |||| ||| || ||||| Sbjct: 1101 aagctgtacatgattatggaagtctgtcgtacttttgatggaatcttcaaggaacatctt 1160 Query: 270 gatggagtgcgccctggtggtgagaaaatttaccatgtatttgacaatcagtttcctgtg 329 |||||||| || |||||||| || ||||| || |||| ||||| |||||| |||| | Sbjct: 1161 gatggagttcgacctggtggagataaaatatataatgtctttgataatcagcttccagct 1220 Query: 330 gcaattaaacggttgcagtttgataagcaactgtcaatggaaaatgtgaggaagctcata 389 ||| | ||||| ||||| |||||||||||||| |||||||| ||||| ||||| || ||| Sbjct: 1221 gcattgaaacgattgcaatttgataagcaactttcaatggacaatgtaaggaaacttata 1280 Query: 390 acggaagctgatggataccagccctcacttgatagctccagagcaaggatatcg 443 || ||||||||||||||||| || || |||| ||||| |||||||||||||| Sbjct: 1281 actgaagctgatggatacca-accacatctgattgctcctgagcaaggatatcg 1333
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 119 bits (60), Expect = 9e-24 Identities = 114/132 (86%) Strand = Plus / Plus Query: 278 gcgccctggtggtgagaaaatttaccatgtatttgacaatcagtttcctgtggcaattaa 337 |||||| ||||| |||||||| ||| |||||||||||||||| ||||| || || | || Sbjct: 28051787 gcgcccaggtggcgagaaaatctactatgtatttgacaatcaatttccggttgctctcaa 28051846 Query: 338 acggttgcagtttgataagcaactgtcaatggaaaatgtgaggaagctcataacggaagc 397 ||| ||||||||||||||| | || |||||||||||||| |||||||| ||||| |||| Sbjct: 28051847 acgattgcagtttgataagaatctttcaatggaaaatgtaaggaagcttataacacaagc 28051906 Query: 398 tgatggatacca 409 |||||||||||| Sbjct: 28051907 tgatggatacca 28051918 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 214 tgtacacgattatggaaatatgccgcatgtttgatggcatctacaaagagcatctggatg 273 ||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||||| Sbjct: 28051599 tgtacacaattatggaaatatgccgcatgttcgatggtatctacaaggagcatctggatg 28051658 Query: 274 ga 275 || Sbjct: 28051659 ga 28051660 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 85 agcatttggagtctgttattaaatcaagaatcccgggtctccagtctcttataacaaaga 144 |||||||||| ||||| |||||||||||||| || || |||| |||||||||| ||| Sbjct: 28051205 agcatttggaatctgtgattaaatcaagaattccagggatccaatctcttataagcaagg 28051264 Query: 145 cagttgcagagctggaaactgaactttctcgtcttggaaa 184 || |||||||||| ||| |||||||| |||||| ||||| Sbjct: 28051265 caattgcagagctagaagctgaacttcatcgtctcggaaa 28051304 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 42 gctcataggatgggatcagaacatttagcaaaga 75 |||||||| ||||||||||| || |||||||||| Sbjct: 28051063 gctcatagaatgggatcagagcacttagcaaaga 28051096
>dbj|AP004363.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0019E03 Length = 152092 Score = 119 bits (60), Expect = 9e-24 Identities = 114/132 (86%) Strand = Plus / Plus Query: 278 gcgccctggtggtgagaaaatttaccatgtatttgacaatcagtttcctgtggcaattaa 337 |||||| ||||| |||||||| ||| |||||||||||||||| ||||| || || | || Sbjct: 66986 gcgcccaggtggcgagaaaatctactatgtatttgacaatcaatttccggttgctctcaa 67045 Query: 338 acggttgcagtttgataagcaactgtcaatggaaaatgtgaggaagctcataacggaagc 397 ||| ||||||||||||||| | || |||||||||||||| |||||||| ||||| |||| Sbjct: 67046 acgattgcagtttgataagaatctttcaatggaaaatgtaaggaagcttataacacaagc 67105 Query: 398 tgatggatacca 409 |||||||||||| Sbjct: 67106 tgatggatacca 67117 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 214 tgtacacgattatggaaatatgccgcatgtttgatggcatctacaaagagcatctggatg 273 ||||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||||| Sbjct: 66798 tgtacacaattatggaaatatgccgcatgttcgatggtatctacaaggagcatctggatg 66857 Query: 274 ga 275 || Sbjct: 66858 ga 66859 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 85 agcatttggagtctgttattaaatcaagaatcccgggtctccagtctcttataacaaaga 144 |||||||||| ||||| |||||||||||||| || || |||| |||||||||| ||| Sbjct: 66404 agcatttggaatctgtgattaaatcaagaattccagggatccaatctcttataagcaagg 66463 Query: 145 cagttgcagagctggaaactgaactttctcgtcttggaaa 184 || |||||||||| ||| |||||||| |||||| ||||| Sbjct: 66464 caattgcagagctagaagctgaacttcatcgtctcggaaa 66503 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 42 gctcataggatgggatcagaacatttagcaaaga 75 |||||||| ||||||||||| || |||||||||| Sbjct: 66262 gctcatagaatgggatcagagcacttagcaaaga 66295
>gb|U25547.1|GMU25547 Glycine max dynamin-like protein SDL12A mRNA, complete cds Length = 2211 Score = 111 bits (56), Expect = 2e-21 Identities = 213/264 (80%), Gaps = 1/264 (0%) Strand = Plus / Plus Query: 197 tgatgctggaggaaagctgtacacgattatggaaatatgccgcatgtttgatggcatcta 256 ||||||||| |||||| |||| | || ||||||||||||||| |||||| || | Sbjct: 1152 tgatgctgggggaaagttgtatgctatcatggaaatatgccgctcatttgatcaaatatt 1211 Query: 257 caaagagcatctggatggagtgcgccctggtggtgagaaaatttaccatgtatttgacaa 316 ||||| ||||| ||||| ||||| ||||| ||||| |||||||| |||| |||||||| Sbjct: 1212 taaagaccatcttgatggcgtgcggcctggaggtgataaaatttataatgtctttgacaa 1271 Query: 317 tcagtttcctgtggcaattaaacggttgcagtttgataagcaactgtcaatggaaaatgt 376 |||| | |||| || | ||| ||||||||||||||||||| || |||||||||||| | Sbjct: 1272 tcagctccctgctgctttaaaaaggttgcagtttgataagcagctttcaatggaaaatat 1331 Query: 377 gaggaagctcataacggaagctgatggataccagccctcacttgatagctccagagcaag 436 ||||| || || || ||||||||||| || ||| ||||| | ||||||||||| |||| Sbjct: 1332 aaggaaacttattacagaagctgatgggtatcag-cctcatctaatagctccagaacaag 1390 Query: 437 gatatcgacgcctcatagaatctt 460 |||| || ||||| || ||||||| Sbjct: 1391 gataccgtcgcctaattgaatctt 1414
>gb|U36430.1|GMU36430 Glycine max dynamin-like protein SDL5A mRNA, complete cds Length = 2134 Score = 103 bits (52), Expect = 5e-19 Identities = 212/264 (80%), Gaps = 1/264 (0%) Strand = Plus / Plus Query: 197 tgatgctggaggaaagctgtacacgattatggaaatatgccgcatgtttgatggcatcta 256 ||||||||| |||||| |||| | || ||||||||||||||| |||||| || | Sbjct: 1104 tgatgctgggggaaagttgtatgcaatcatggaaatatgccgctcatttgatcaaatatt 1163 Query: 257 caaagagcatctggatggagtgcgccctggtggtgagaaaatttaccatgtatttgacaa 316 ||||| ||||| ||||| ||||| ||||| ||||| |||||||| |||| |||||||| Sbjct: 1164 taaagaccatcttgatggcgtgcggcctggaggtgataaaatttataatgtctttgacaa 1223 Query: 317 tcagtttcctgtggcaattaaacggttgcagtttgataagcaactgtcaatggaaaatgt 376 |||| | || | || | ||| ||||||||||||||||||| || |||||||||||| | Sbjct: 1224 tcagctccccgctgctttaaaaaggttgcagtttgataagcagctttcaatggaaaatat 1283 Query: 377 gaggaagctcataacggaagctgatggataccagccctcacttgatagctccagagcaag 436 ||||| || || || ||||||||||| || ||| ||||| | ||||||||||| |||| Sbjct: 1284 aaggaaacttattactgaagctgatgggtatcag-cctcatcttatagctccagaacaag 1342 Query: 437 gatatcgacgcctcatagaatctt 460 ||||||| || || || ||||||| Sbjct: 1343 gatatcgtcgtctaattgaatctt 1366
>gb|AC142526.5| Medicago truncatula clone mth2-34h20, complete sequence Length = 113622 Score = 93.7 bits (47), Expect = 5e-16 Identities = 147/179 (82%), Gaps = 1/179 (0%) Strand = Plus / Minus Query: 282 cctggtggtgagaaaatttaccatgtatttgacaatcagtttcctgtggcaattaaacgg 341 ||||||||||| |||||||| |||| |||||||||||| | |||| || | ||| || Sbjct: 28778 cctggtggtgataaaatttataatgtctttgacaatcagctccctgctgctctaaaaagg 28719 Query: 342 ttgcagtttgataagcaactgtcaatggaaaatgtgaggaagctcataacggaagctgat 401 ||||||||||||||||| || || ||||||||| | ||||| || || || ||||||||| Sbjct: 28718 ttgcagtttgataagcagctttcgatggaaaatataaggaaacttatcacagaagctgat 28659 Query: 402 ggataccagccctcacttgatagctccagagcaaggatatcgacgcctcatagaatctt 460 ||||| || ||||| || || || ||||| |||||||| || |||||||| ||||||| Sbjct: 28658 ggatatca-acctcatttaattgcgccagaacaaggataccgtcgcctcattgaatctt 28601
>ref|NM_116041.2| Arabidopsis thaliana GTP binding / GTPase AT3G61760 mRNA, complete cds Length = 1926 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 51 atgggatcagaacatttagcaaagagtctgtcgaagcatttggagtctgttattaaatca 110 ||||| ||||| |||||| ||||| || || ||||||||||| |||||| || || Sbjct: 893 atgggttcagagtatttaggaaagatgctctctaagcatttggaagttgttatcaagtct 952 Query: 111 agaatcccgggtctccagtctcttataacaaagaca 146 ||||||||||| || ||||||||||| ||||||||| Sbjct: 953 agaatcccgggacttcagtctcttatcacaaagaca 988
>gb|AY189279.1| Arabidopsis thaliana dynamin-like protein B mRNA, complete cds Length = 1926 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 51 atgggatcagaacatttagcaaagagtctgtcgaagcatttggagtctgttattaaatca 110 ||||| ||||| |||||| ||||| || || ||||||||||| |||||| || || Sbjct: 893 atgggttcagagtatttaggaaagatgctctctaagcatttggaagttgttatcaagtct 952 Query: 111 agaatcccgggtctccagtctcttataacaaagaca 146 ||||||||||| || ||||||||||| ||||||||| Sbjct: 953 agaatcccgggacttcagtctcttatcacaaagaca 988
>emb|AL138642.1|ATF21F14 Arabidopsis thaliana DNA chromosome 3, BAC clone F21F14 Length = 142001 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 85 agcatttggagtctgttattaaatcaagaatcccgggtctccagtctcttataacaaaga 144 |||||||||| |||||| || || ||||||||||| || ||||||||||| ||||||| Sbjct: 24559 agcatttggaagttgttatcaagtctagaatcccgggacttcagtctcttatcacaaaga 24500 Query: 145 ca 146 || Sbjct: 24499 ca 24498
>emb|AL132959.1|ATF15G16 Arabidopsis thaliana DNA chromosome 3, BAC clone F15G16 Length = 104868 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 85 agcatttggagtctgttattaaatcaagaatcccgggtctccagtctcttataacaaaga 144 |||||||||| |||||| || || ||||||||||| || ||||||||||| ||||||| Sbjct: 73247 agcatttggaagttgttatcaagtctagaatcccgggacttcagtctcttatcacaaaga 73188 Query: 145 ca 146 || Sbjct: 73187 ca 73186
>dbj|AP004493.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT08D16, TM0025b, complete sequence Length = 36100 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Plus Query: 282 cctggtggtgagaaaatttaccatgtatttgacaatcagtttcctgtggcaattaaacgg 341 ||||| ||||| |||||||| |||| |||||||||||| | |||| || | ||| || Sbjct: 32150 cctggaggtgataaaatttataatgtctttgacaatcagctccctgcagctttgaaaagg 32209 Query: 342 ttgcagtttgataagcaactgtcaatggaaaatgtgaggaagctcataacggaagctgat 401 ||||| |||||||| || || ||||||||||| | ||||| || || || ||||||||| Sbjct: 32210 ttgcaatttgataaacagctttcaatggaaaacataaggaaacttattacagaagctgat 32269 Query: 402 gg 403 || Sbjct: 32270 gg 32271
>ref|NM_123573.3| Arabidopsis thaliana ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN); GTP binding AT5G42080 (ADL1) transcript variant AT5G42080.2 mRNA, complete cds Length = 1669 Score = 50.1 bits (25), Expect = 0.007 Identities = 112/141 (79%) Strand = Plus / Plus Query: 152 agagctggaaactgaactttctcgtcttggaaagcccatcgctaatgatgctggaggaaa 211 |||||||||||||||||| ||| ||||||||||| || || |||||| || || || Sbjct: 1150 agagctggaaactgaactaagtcgccttggaaagcctattgcagctgatgcaggggggaa 1209 Query: 212 gctgtacacgattatggaaatatgccgcatgtttgatggcatctacaaagagcatctgga 271 | ||||| | || ||||| ||||| || | |||||| || | |||||||||||| || Sbjct: 1210 gttgtactcaataatggagatatgtcggctttttgatcaaatattcaaagagcatcttga 1269 Query: 272 tggagtgcgccctggtggtga 292 ||||||||| |||||||||| Sbjct: 1270 tggagtgcgtgctggtggtga 1290 Score = 44.1 bits (22), Expect = 0.41 Identities = 38/42 (90%), Gaps = 1/42 (2%) Strand = Plus / Plus Query: 396 gctgatggataccagccctcacttgatagctccagagcaagg 437 |||||||| |||||||| ||||||||| ||||| |||||||| Sbjct: 1394 gctgatggttaccagcc-tcacttgattgctcctgagcaagg 1434
>ref|NM_180789.1| Arabidopsis thaliana ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN); GTP binding AT5G42080 (ADL1) transcript variant AT5G42080.1 mRNA, complete cds Length = 2427 Score = 50.1 bits (25), Expect = 0.007 Identities = 112/141 (79%) Strand = Plus / Plus Query: 152 agagctggaaactgaactttctcgtcttggaaagcccatcgctaatgatgctggaggaaa 211 |||||||||||||||||| ||| ||||||||||| || || |||||| || || || Sbjct: 1150 agagctggaaactgaactaagtcgccttggaaagcctattgcagctgatgcaggggggaa 1209 Query: 212 gctgtacacgattatggaaatatgccgcatgtttgatggcatctacaaagagcatctgga 271 | ||||| | || ||||| ||||| || | |||||| || | |||||||||||| || Sbjct: 1210 gttgtactcaataatggagatatgtcggctttttgatcaaatattcaaagagcatcttga 1269 Query: 272 tggagtgcgccctggtggtga 292 ||||||||| |||||||||| Sbjct: 1270 tggagtgcgtgctggtggtga 1290 Score = 44.1 bits (22), Expect = 0.41 Identities = 38/42 (90%), Gaps = 1/42 (2%) Strand = Plus / Plus Query: 396 gctgatggataccagccctcacttgatagctccagagcaagg 437 |||||||| |||||||| ||||||||| ||||| |||||||| Sbjct: 1394 gctgatggttaccagcc-tcacttgattgctcctgagcaagg 1434
>gb|BT001063.1| Arabidopsis thaliana At5g42080/MJC20_19 mRNA, complete cds Length = 1833 Score = 50.1 bits (25), Expect = 0.007 Identities = 112/141 (79%) Strand = Plus / Plus Query: 152 agagctggaaactgaactttctcgtcttggaaagcccatcgctaatgatgctggaggaaa 211 |||||||||||||||||| ||| ||||||||||| || || |||||| || || || Sbjct: 933 agagctggaaactgaactaagtcgccttggaaagcctattgcagctgatgcaggggggaa 992 Query: 212 gctgtacacgattatggaaatatgccgcatgtttgatggcatctacaaagagcatctgga 271 | ||||| | || ||||| ||||| || | |||||| || | |||||||||||| || Sbjct: 993 gttgtactcaataatggagatatgtcggctttttgatcaaatattcaaagagcatcttga 1052 Query: 272 tggagtgcgccctggtggtga 292 ||||||||| |||||||||| Sbjct: 1053 tggagtgcgtgctggtggtga 1073 Score = 44.1 bits (22), Expect = 0.41 Identities = 38/42 (90%), Gaps = 1/42 (2%) Strand = Plus / Plus Query: 396 gctgatggataccagccctcacttgatagctccagagcaagg 437 |||||||| |||||||| ||||||||| ||||| |||||||| Sbjct: 1177 gctgatggttaccagcc-tcacttgattgctcctgagcaagg 1217
>gb|AY094408.1| Arabidopsis thaliana AT5g42080/MJC20_19 mRNA, complete cds Length = 2269 Score = 50.1 bits (25), Expect = 0.007 Identities = 112/141 (79%) Strand = Plus / Plus Query: 152 agagctggaaactgaactttctcgtcttggaaagcccatcgctaatgatgctggaggaaa 211 |||||||||||||||||| ||| ||||||||||| || || |||||| || || || Sbjct: 1150 agagctggaaactgaactaagtcgccttggaaagcctattgcagctgatgcaggggggaa 1209 Query: 212 gctgtacacgattatggaaatatgccgcatgtttgatggcatctacaaagagcatctgga 271 | ||||| | || ||||| ||||| || | |||||| || | |||||||||||| || Sbjct: 1210 gttgtactcaataatggagatatgtcggctttttgatcaaatattcaaagagcatcttga 1269 Query: 272 tggagtgcgccctggtggtga 292 ||||||||| |||||||||| Sbjct: 1270 tggagtgcgtgctggtggtga 1290 Score = 44.1 bits (22), Expect = 0.41 Identities = 38/42 (90%), Gaps = 1/42 (2%) Strand = Plus / Plus Query: 396 gctgatggataccagccctcacttgatagctccagagcaagg 437 |||||||| |||||||| ||||||||| ||||| |||||||| Sbjct: 1394 gctgatggttaccagcc-tcacttgattgctcctgagcaagg 1434
>gb|AY088201.1| Arabidopsis thaliana clone 42932 mRNA, complete sequence Length = 1617 Score = 50.1 bits (25), Expect = 0.007 Identities = 112/141 (79%) Strand = Plus / Plus Query: 152 agagctggaaactgaactttctcgtcttggaaagcccatcgctaatgatgctggaggaaa 211 |||||||||||||||||| ||| ||||||||||| || || |||||| || || || Sbjct: 1153 agagctggaaactgaactaagtcgccttggaaagcctattgcagctgatgcaggggggaa 1212 Query: 212 gctgtacacgattatggaaatatgccgcatgtttgatggcatctacaaagagcatctgga 271 | ||||| | || ||||| ||||| || | |||||| || | |||||||||||| || Sbjct: 1213 gttgtactcaataatggagatatgtcggctttttgatcaaatattcaaagagcatcttga 1272 Query: 272 tggagtgcgccctggtggtga 292 ||||||||| |||||||||| Sbjct: 1273 tggagtgcgtgctggtggtga 1293 Score = 44.1 bits (22), Expect = 0.41 Identities = 38/42 (90%), Gaps = 1/42 (2%) Strand = Plus / Plus Query: 396 gctgatggataccagccctcacttgatagctccagagcaagg 437 |||||||| |||||||| ||||||||| ||||| |||||||| Sbjct: 1397 gctgatggttaccagcc-tcacttgattgctcctgagcaagg 1437
>gb|L36939.1|ATHDYNAGTP Arabidopsis thaliana dynamin-like GTP binding protein mRNA, complete cds Length = 2160 Score = 50.1 bits (25), Expect = 0.007 Identities = 112/141 (79%) Strand = Plus / Plus Query: 152 agagctggaaactgaactttctcgtcttggaaagcccatcgctaatgatgctggaggaaa 211 |||||||||||||||||| ||| ||||||||||| || || |||||| || || || Sbjct: 1030 agagctggaaactgaactaagtcgccttggaaagcctattgcagctgatgcaggggggaa 1089 Query: 212 gctgtacacgattatggaaatatgccgcatgtttgatggcatctacaaagagcatctgga 271 | ||||| | || ||||| ||||| || | |||||| || | |||||||||||| || Sbjct: 1090 gttgtactcaataatggagatatgtcggctttttgatcaaatattcaaagagcatcttga 1149 Query: 272 tggagtgcgccctggtggtga 292 ||||||||| |||||||||| Sbjct: 1150 tggagtgcgtgctggtggtga 1170 Score = 44.1 bits (22), Expect = 0.41 Identities = 38/42 (90%), Gaps = 1/42 (2%) Strand = Plus / Plus Query: 396 gctgatggataccagccctcacttgatagctccagagcaagg 437 |||||||| |||||||| ||||||||| ||||| |||||||| Sbjct: 1274 gctgatggttaccagcc-tcacttgattgctcctgagcaagg 1314
>gb|L38614.1|ATHGTPBPA Arabidopsis thaliana GTP-binding protein mRNA, complete cds Length = 2234 Score = 50.1 bits (25), Expect = 0.007 Identities = 112/141 (79%) Strand = Plus / Plus Query: 152 agagctggaaactgaactttctcgtcttggaaagcccatcgctaatgatgctggaggaaa 211 |||||||||||||||||| ||| ||||||||||| || || |||||| || || || Sbjct: 1139 agagctggaaactgaactaagtcgccttggaaagcctattgcagctgatgcaggggggaa 1198 Query: 212 gctgtacacgattatggaaatatgccgcatgtttgatggcatctacaaagagcatctgga 271 | ||||| | || ||||| ||||| || | |||||| || | |||||||||||| || Sbjct: 1199 gttgtactcaataatggagatatgtcggctttttgatcaaatattcaaagagcatcttga 1258 Query: 272 tggagtgcgccctggtggtga 292 ||||||||| |||||||||| Sbjct: 1259 tggagtgcgtgctggtggtga 1279 Score = 44.1 bits (22), Expect = 0.41 Identities = 38/42 (90%), Gaps = 1/42 (2%) Strand = Plus / Plus Query: 396 gctgatggataccagccctcacttgatagctccagagcaagg 437 |||||||| |||||||| ||||||||| ||||| |||||||| Sbjct: 1383 gctgatggttaccagcc-tcacttgattgctcctgagcaagg 1423
>gb|AC118347.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0043E10, complete sequence Length = 124591 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 317 tcagtttcctgtggcaattaaa 338 |||||||||||||||||||||| Sbjct: 65793 tcagtttcctgtggcaattaaa 65814
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 317 tcagtttcctgtggcaattaaa 338 |||||||||||||||||||||| Sbjct: 22128911 tcagtttcctgtggcaattaaa 22128890
>dbj|AB017067.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJC20 Length = 83689 Score = 44.1 bits (22), Expect = 0.41 Identities = 38/42 (90%), Gaps = 1/42 (2%) Strand = Plus / Minus Query: 396 gctgatggataccagccctcacttgatagctccagagcaagg 437 |||||||| |||||||| ||||||||| ||||| |||||||| Sbjct: 43910 gctgatggttaccagcc-tcacttgattgctcctgagcaagg 43870 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 152 agagctggaaactgaactttctcgtcttggaaagcc 187 |||||||||||||||||| ||| ||||||||||| Sbjct: 44361 agagctggaaactgaactaagtcgccttggaaagcc 44326
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 317 tcagtttcctgtggcaattaaa 338 |||||||||||||||||||||| Sbjct: 22438822 tcagtttcctgtggcaattaaa 22438801
>gb|AC139060.5| Mus musculus chromosome 16, clone RP23-58G17, complete sequence Length = 196065 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 tcttataacaaagacagttgc 151 ||||||||||||||||||||| Sbjct: 1281 tcttataacaaagacagttgc 1301
>gb|AC136915.14| Mus musculus chromosome 16, clone RP23-65O24, complete sequence Length = 140233 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 tcttataacaaagacagttgc 151 ||||||||||||||||||||| Sbjct: 63427 tcttataacaaagacagttgc 63407
>gb|AY109633.1| Zea mays CL692_1 mRNA sequence Length = 2155 Score = 42.1 bits (21), Expect = 1.6 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 396 gctgatggataccagccctcacttgatagctccagagcaaggata 440 |||||||| ||||||||| |||||||| || || ||||||||||| Sbjct: 1265 gctgatggttaccagccc-cacttgattgcccctgagcaaggata 1308
>ref|XM_750791.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g15490) partial mRNA Length = 1689 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 agctccagagcaaggatatc 442 |||||||||||||||||||| Sbjct: 1094 agctccagagcaaggatatc 1075
>emb|AL138876.23| Human DNA sequence from clone RP11-145H9 on chromosome 6 Contains part of a gene for a novel protein similar to myosin light chain kinase and two novel genes, complete sequence Length = 107888 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 aatggaaaatgtgaggaagctcat 388 ||||||||||||||| |||||||| Sbjct: 78386 aatggaaaatgtgagaaagctcat 78409
>emb|CR378679.1| Photobacterium profundum SS9 chromosome 2; segment 5/7 Length = 349464 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 tcagaacatttagcaaagag 76 |||||||||||||||||||| Sbjct: 61086 tcagaacatttagcaaagag 61067
>dbj|AK127360.1| Homo sapiens cDNA FLJ45434 fis, clone BRHIP3041587, weakly similar to Myosin light chain kinase, skeletal muscle (EC 2.7.1.117) Length = 4657 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 365 aatggaaaatgtgaggaagctcat 388 ||||||||||||||| |||||||| Sbjct: 1703 aatggaaaatgtgagaaagctcat 1680
>gb|U58760.2| Caenorhabditis elegans cosmid C27A2, complete sequence Length = 29370 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ctgaactttctcgtcttgga 182 |||||||||||||||||||| Sbjct: 12116 ctgaactttctcgtcttgga 12135
>gb|AC156499.2| Mus musculus BAC clone RP24-180M2 from chromosome 9, complete sequence Length = 178466 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 tgcagagctggaaactgaac 168 |||||||||||||||||||| Sbjct: 93683 tgcagagctggaaactgaac 93664
>ref|NM_062534.2| Caenorhabditis elegans C27A2.1 (C27A2.1) mRNA, complete cds Length = 3352 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ctgaactttctcgtcttgga 182 |||||||||||||||||||| Sbjct: 1559 ctgaactttctcgtcttgga 1578
>gb|AC166003.3| Nomascus leucogenys leucogenys clone CH271-85O19, complete sequence Length = 164417 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 gaaactgaactttctcgtct 178 |||||||||||||||||||| Sbjct: 84543 gaaactgaactttctcgtct 84562
>ref|NM_001012418.1| Homo sapiens hypothetical protein LOC340156 (LOC340156), mRNA Length = 5769 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 365 aatggaaaatgtgaggaagctcat 388 ||||||||||||||| |||||||| Sbjct: 2801 aatggaaaatgtgagaaagctcat 2778
>ref|XM_237191.3| PREDICTED: Rattus norvegicus frizzled homolog 7 (Drosophila) (predicted) (Fzd7_predicted), mRNA Length = 4352 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gtctcttataacaaagacag 147 |||||||||||||||||||| Sbjct: 4022 gtctcttataacaaagacag 4003
>gb|AC068483.6| Homo sapiens BAC clone RP11-31G7 from 2, complete sequence Length = 157285 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 catttagcaaagagtctgtc 82 |||||||||||||||||||| Sbjct: 41359 catttagcaaagagtctgtc 41378
>emb|BX647582.1|HSM807728 Homo sapiens mRNA; cDNA DKFZp451H166 (from clone DKFZp451H166) Length = 5769 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 365 aatggaaaatgtgaggaagctcat 388 ||||||||||||||| |||||||| Sbjct: 2801 aatggaaaatgtgagaaagctcat 2778
>dbj|AK122581.1| Homo sapiens mRNA for FLJ00265 protein Length = 4752 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 365 aatggaaaatgtgaggaagctcat 388 ||||||||||||||| |||||||| Sbjct: 1806 aatggaaaatgtgagaaagctcat 1783
>gb|AC004386.1|AC004386 Homo Sapiens Chromosome X clone bWXD691, complete sequence Length = 172657 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 caactgtcaatggaaaatgt 376 |||||||||||||||||||| Sbjct: 132876 caactgtcaatggaaaatgt 132895
>gb|AC002418.1|AC002418 Human Chromosome X, complete sequence Length = 128915 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 caactgtcaatggaaaatgt 376 |||||||||||||||||||| Sbjct: 37899 caactgtcaatggaaaatgt 37880 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,076,829 Number of Sequences: 3902068 Number of extensions: 4076829 Number of successful extensions: 73411 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 47 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 73236 Number of HSP's gapped (non-prelim): 162 length of query: 477 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 455 effective length of database: 17,147,199,772 effective search space: 7801975896260 effective search space used: 7801975896260 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
