ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags20a18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_475877.1| Oryza sativa (japonica cultivar-group), predic... 262 1e-66
2dbj|AK064358.1| Oryza sativa (japonica cultivar-group) cDNA clon... 254 3e-64
3dbj|AK072626.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
4gb|AC093956.2| Oryza sativa (japonica cultivar-group) chromosome... 172 8e-40
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 172 8e-40
6ref|XM_475878.1| Oryza sativa (japonica cultivar-group), predic... 74 5e-10
7gb|AC155340.1| Brassica rapa subsp. pekinensis chromosome Cytoge... 50 0.008
8gb|AF131215.2| Homo sapiens chromosome 8 map 8p23-p22 clone CTC-... 42 1.8
9ref|NM_169190.1| Drosophila melanogaster CG32465-RB (CG32465), mRNA 42 1.8
10gb|AC160639.2| Mus musculus BAC clone RP23-103I12 from chromosom... 42 1.8
11gb|AC011253.4|AC011253 Drosophila melanogaster, chromosome 3R, r... 42 1.8
12gb|BT024454.1| Drosophila melanogaster AT29264 full insert cDNA 42 1.8
13gb|AC100809.9| Homo sapiens chromosome 8, clone CTC-493P15, comp... 42 1.8
14gb|AC134575.3| Mus musculus BAC clone RP24-67I21 from chromosome... 42 1.8
15emb|BX530055.9| Mouse DNA sequence from clone RP23-462G16 on chr... 42 1.8
16gb|AE003671.4| Drosophila melanogaster chromosome 3R, section 13... 42 1.8
17gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 7.3
18gb|AC092214.3| Homo sapiens BAC clone RP11-811J9 from 7, complet... 40 7.3
19ref|XM_533225.2| PREDICTED: Canis familiaris similar to sperm-as... 40 7.3
20emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 7.3
21emb|AL731796.4| Human DNA sequence from clone RP13-344M15 on chr... 40 7.3
22emb|AL035665.32|HS644L1 Human DNA sequence from clone RP4-644L1 ... 40 7.3
23gb|AC129928.3| Homo sapiens chromosome 8, clone RP11-1112C19, co... 40 7.3
24emb|AJ621746.1| Gallus gallus partial P4HA2 gene exons 1-14 and ... 40 7.3
25gb|AC011498.7| Homo sapiens chromosome 19 clone CTB-50L17, compl... 40 7.3
26gb|AC009404.5| Homo sapiens BAC clone RP11-28H22 from 2, complet... 40 7.3
27gb|AC073895.22| Homo sapiens 3 BAC RP11-622L21 (Roswell Park Can... 40 7.3
28gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 40 7.3
29gb|AF075004.1|HUMYH97G12 Homo sapiens full length insert cDNA YH... 40 7.3
30dbj|AP005362.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 7.3
31dbj|AP003694.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 7.3
32dbj|AB065453.1| Homo sapiens gene for seven transmembrane helix ... 40 7.3
33emb|AL627185.10| Mouse DNA sequence from clone RP23-332E2 on chr... 40 7.3 
>ref|XM_475877.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1116

 Score =  262 bits (132), Expect = 1e-66
 Identities = 306/364 (84%)
 Strand = Plus / Plus

                                                                       
Query: 3   tgtagagacgctcaaggagaacatcgctgcgtatttcaatgtcctgcagggtttcctttt 62
           |||||| || ||||||||||||||||  || ||||||||  |||||||||||||||||||
Sbjct: 225 tgtagaaacactcaaggagaacatcgtcgcatatttcaacatcctgcagggtttcctttt 284

                                                                       
Query: 63  ggcttgccatggaagcacggtcggtgctggtcctactcttcacaagtatatcactagttc 122
           || |||||| || ||||| || || || || || || |||||||| |  |||  ||| ||
Sbjct: 285 gggttgccacggcagcacagttggcgcaggacccacacttcacaaatccatctgtagctc 344

                                                                       
Query: 123 tgcaaagggcgtggtggattccagcttctcgttgttcaagctagctgtttctgcctatga 182
           |||||||   || || || ||||||||||| |||||||| | |||||||||||| |||||
Sbjct: 345 tgcaaagaatgttgttgactccagcttctcattgttcaatcaagctgtttctgcttatga 404

                                                                       
Query: 183 atctggcaatcctgaccggaaaacaatcatacctccagtgacaggaactgtatgggaagc 242
           |||  ||| |||||||||||||||||  |||||||  |||||||||||||||||||||||
Sbjct: 405 atcacgcagtcctgaccggaaaacaactatacctcaggtgacaggaactgtatgggaagc 464

                                                                       
Query: 243 ttgtcttgctcttaagaaggtgcctgcaaccaactgtatcgccataggccgagctatgac 302
            ||||||||||| || ||||| ||  ||||||||||| | |||||||| ||||| |||||
Sbjct: 465 atgtcttgctctcaacaaggtaccaacaaccaactgtgttgccataggacgagccatgac 524

                                                                       
Query: 303 gcagatatgtgtatgtctgaaggatatcctgcgtgagatgaaagaactcccaattggtga 362
            |||||| |||| | |||||||||||| || || |||||||||||||| |||||||||||
Sbjct: 525 tcagataggtgtgtatctgaaggatattctccgagagatgaaagaactaccaattggtga 584

               
Query: 363 ttct 366
           ||||
Sbjct: 585 ttct 588
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>dbj|AK064358.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-B07, full
           insert sequence
          Length = 1372

 Score =  254 bits (128), Expect = 3e-64
 Identities = 305/364 (83%)
 Strand = Plus / Plus

                                                                       
Query: 3   tgtagagacgctcaaggagaacatcgctgcgtatttcaatgtcctgcagggtttcctttt 62
           |||||| || ||||||||||||||||  || ||||||||  |||||||||||||||||||
Sbjct: 330 tgtagaaacactcaaggagaacatcgtcgcatatttcaacatcctgcagggtttcctttt 389

                                                                       
Query: 63  ggcttgccatggaagcacggtcggtgctggtcctactcttcacaagtatatcactagttc 122
           || |||||| || ||||| || || || || || || |||||||| |  |||  ||| ||
Sbjct: 390 gggttgccacggcagcacagttggcgcaggacccacacttcacaaatccatctgtagctc 449

                                                                       
Query: 123 tgcaaagggcgtggtggattccagcttctcgttgttcaagctagctgtttctgcctatga 182
           |||||||   |  || || ||||||||||| |||||||| | |||||||||||| |||||
Sbjct: 450 tgcaaagaatgatgttgactccagcttctcattgttcaatcgagctgtttctgcttatga 509

                                                                       
Query: 183 atctggcaatcctgaccggaaaacaatcatacctccagtgacaggaactgtatgggaagc 242
           |||  ||| |||||||||||||||||  |||||||  |||||||||||||||||||||||
Sbjct: 510 atcacgcagtcctgaccggaaaacaactatacctcaggtgacaggaactgtatgggaagc 569

                                                                       
Query: 243 ttgtcttgctcttaagaaggtgcctgcaaccaactgtatcgccataggccgagctatgac 302
            ||||||||||| || ||||| ||  ||||||||||| | |||||||| ||||| |||||
Sbjct: 570 atgtcttgctctcaacaaggtaccaacaaccaactgtgttgccataggacgagccatgac 629

                                                                       
Query: 303 gcagatatgtgtatgtctgaaggatatcctgcgtgagatgaaagaactcccaattggtga 362
            |||||| |||| | |||||||||||| || || |||||||||||||| |||||||||||
Sbjct: 630 tcagataggtgtgtatctgaaggatattctccgagagatgaaagaactaccaattggtga 689

               
Query: 363 ttct 366
           ||||
Sbjct: 690 ttct 693
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>dbj|AK072626.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131O08, full
            insert sequence
          Length = 3157

 Score =  194 bits (98), Expect = 2e-46
 Identities = 302/366 (82%), Gaps = 3/366 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    tgtagagacgctcaaggagaacatcgctgcgtatttcaatgtcctg-cagggtttccttt 61
            |||||| || ||||||||||||||||  || ||||||||  ||||| |||||||||||||
Sbjct: 2131 tgtagaaacactcaaggagaacatcgtcgcatatttcaacatcctggcagggtttccttt 2190

                                                                        
Query: 62   tggcttgccatggaagcacggtcggtgctggtcctactcttcacaagtatatcactagtt 121
            ||| |||||| || ||||| || || || || || || |||||||| |  |||  ||| |
Sbjct: 2191 tgggttgccacggcagcacagttggcgcaggacccacacttcacaaatccatctgtagct 2250

                                                                        
Query: 122  ctgcaaagggcgt-ggtggattccagcttctcgttgttcaagctagctgtttctgcctat 180
            ||||||||   || ||| || ||||||||||| |||||||| | |||||||||||| |||
Sbjct: 2251 ctgcaaagaatgttggttgactccagcttctcattgttcaatcaagctgtttctgcttat 2310

                                                                        
Query: 181  gaatctggcaatcctgaccggaaaacaatcatacctccagtgacaggaactgtatgggaa 240
            |||||   || |||||||||| ||||||  |||||||  ||||| ||| |||||||||||
Sbjct: 2311 gaatcacccactcctgaccgggaaacaactatacctcaggtgaccgga-ctgtatgggaa 2369

                                                                        
Query: 241  gcttgtcttgctcttaagaaggtgcctgcaaccaactgtatcgccataggccgagctatg 300
            || | ||||||||| || ||||| ||  ||||||||||| | |||||||| ||||| |||
Sbjct: 2370 gcatttcttgctctcaacaaggtacccacaaccaactgtgttgccataggacgagccatg 2429

                                                                        
Query: 301  acgcagatatgtgtatgtctgaaggatatcctgcgtgagatgaaagaactcccaattggt 360
            || |||||| |||| | |||||||||||| || || |||||||||||||| |||||||||
Sbjct: 2430 actcagataggtgtgtatctgaaggatattctccgagagatgaaagaactaccaattggt 2489

                  
Query: 361  gattct 366
            ||||||
Sbjct: 2490 gattct 2495
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>gb|AC093956.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1263_E10,
             complete sequence
          Length = 116469

 Score =  172 bits (87), Expect = 8e-40
 Identities = 153/175 (87%)
 Strand = Plus / Plus

                                                                         
Query: 192   tcctgaccggaaaacaatcatacctccagtgacaggaactgtatgggaagcttgtcttgc 251
             |||||||||||||||||  |||||||  ||||||||||||||||||||||| ||||||||
Sbjct: 54194 tcctgaccggaaaacaactatacctcaggtgacaggaactgtatgggaagcatgtcttgc 54253

                                                                         
Query: 252   tcttaagaaggtgcctgcaaccaactgtatcgccataggccgagctatgacgcagatatg 311
             ||| || ||||| ||  ||||||||||| | |||||||| ||||| ||||| |||||| |
Sbjct: 54254 tctcaacaaggtaccaacaaccaactgtgttgccataggacgagccatgactcagatagg 54313

                                                                    
Query: 312   tgtatgtctgaaggatatcctgcgtgagatgaaagaactcccaattggtgattct 366
             ||| | |||||||||||| || || |||||||||||||| |||||||||||||||
Sbjct: 54314 tgtgtatctgaaggatattctccgagagatgaaagaactaccaattggtgattct 54368



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 146/179 (81%)
 Strand = Plus / Plus

                                                                         
Query: 3     tgtagagacgctcaaggagaacatcgctgcgtatttcaatgtcctgcagggtttcctttt 62
             |||||| || ||||||||||||||||  || ||||||||  |||||||||||||||||||
Sbjct: 53694 tgtagaaacactcaaggagaacatcgtcgcatatttcaacatcctgcagggtttcctttt 53753

                                                                         
Query: 63    ggcttgccatggaagcacggtcggtgctggtcctactcttcacaagtatatcactagttc 122
             || |||||| || ||||| || || || || || || |||||||| |  |||  ||| ||
Sbjct: 53754 gggttgccacggcagcacagttggcgcaggacccacacttcacaaatccatctgtagctc 53813

                                                                        
Query: 123   tgcaaagggcgtggtggattccagcttctcgttgttcaagctagctgtttctgcctatg 181
             |||||||   || || || ||||||||||| |||||||| | |||||||||||| ||||
Sbjct: 53814 tgcaaagaatgttgttgactccagcttctcattgttcaatcaagctgtttctgcttatg 53872
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  172 bits (87), Expect = 8e-40
 Identities = 153/175 (87%)
 Strand = Plus / Plus

                                                                            
Query: 192      tcctgaccggaaaacaatcatacctccagtgacaggaactgtatgggaagcttgtcttgc 251
                |||||||||||||||||  |||||||  ||||||||||||||||||||||| ||||||||
Sbjct: 27341737 tcctgaccggaaaacaactatacctcaggtgacaggaactgtatgggaagcatgtcttgc 27341796

                                                                            
Query: 252      tcttaagaaggtgcctgcaaccaactgtatcgccataggccgagctatgacgcagatatg 311
                ||| || ||||| ||  ||||||||||| | |||||||| ||||| ||||| |||||| |
Sbjct: 27341797 tctcaacaaggtaccaacaaccaactgtgttgccataggacgagccatgactcagatagg 27341856

                                                                       
Query: 312      tgtatgtctgaaggatatcctgcgtgagatgaaagaactcccaattggtgattct 366
                ||| | |||||||||||| || || |||||||||||||| |||||||||||||||
Sbjct: 27341857 tgtgtatctgaaggatattctccgagagatgaaagaactaccaattggtgattct 27341911



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 146/179 (81%)
 Strand = Plus / Plus

                                                                            
Query: 3        tgtagagacgctcaaggagaacatcgctgcgtatttcaatgtcctgcagggtttcctttt 62
                |||||| || ||||||||||||||||  || ||||||||  |||||||||||||||||||
Sbjct: 27341237 tgtagaaacactcaaggagaacatcgtcgcatatttcaacatcctgcagggtttcctttt 27341296

                                                                            
Query: 63       ggcttgccatggaagcacggtcggtgctggtcctactcttcacaagtatatcactagttc 122
                || |||||| || ||||| || || || || || || |||||||| |  |||  ||| ||
Sbjct: 27341297 gggttgccacggcagcacagttggcgcaggacccacacttcacaaatccatctgtagctc 27341356

                                                                           
Query: 123      tgcaaagggcgtggtggattccagcttctcgttgttcaagctagctgtttctgcctatg 181
                |||||||   || || || ||||||||||| |||||||| | |||||||||||| ||||
Sbjct: 27341357 tgcaaagaatgttgttgactccagcttctcattgttcaatcaagctgtttctgcttatg 27341415
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>ref|XM_475878.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 597

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                       
Query: 298 atgacgcagatatgtgtatgtctgaaggatatcctgcgtgagatgaaagaactcccaatt 357
           ||||| |||||| |||| | |||||||||||| || || |||||||||||||| ||||||
Sbjct: 1   atgactcagataggtgtgtatctgaaggatattctccgagagatgaaagaactaccaatt 60

                    
Query: 358 ggtgattct 366
           |||||||||
Sbjct: 61  ggtgattct 69
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>gb|AC155340.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
             clone KBrH020D15, complete sequence
          Length = 143633

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 66    ttgccatggaagcacggtcggtgctggtcctactctt 102
             ||||||||||||||| || |||||||| |||||||||
Sbjct: 34443 ttgccatggaagcactgttggtgctggccctactctt 34479
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>gb|AF131215.2| Homo sapiens chromosome 8 map 8p23-p22 clone CTC-306G11, complete
              sequence; and clones CTC-493P15, CTB-91N18, CTC-164D9,
              partial sequence
          Length = 186607

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 383    aaaaatcttccaatggagatg 403
              |||||||||||||||||||||
Sbjct: 110105 aaaaatcttccaatggagatg 110125
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>ref|NM_169190.1| Drosophila melanogaster CG32465-RB (CG32465), mRNA
          Length = 2948

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 12  gctcaaggagaacatcgctgc 32
           |||||||||||||||||||||
Sbjct: 378 gctcaaggagaacatcgctgc 398
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>gb|AC160639.2| Mus musculus BAC clone RP23-103I12 from chromosome 14, complete sequence
          Length = 195224

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 437    tctgtgatcttgaggaagatg 457
              |||||||||||||||||||||
Sbjct: 181805 tctgtgatcttgaggaagatg 181785
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>gb|AC011253.4|AC011253 Drosophila melanogaster, chromosome 3R, region 84D-84D, BAC clone
             BACR37K05, complete sequence
          Length = 197597

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 12    gctcaaggagaacatcgctgc 32
             |||||||||||||||||||||
Sbjct: 85800 gctcaaggagaacatcgctgc 85780
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>gb|BT024454.1| Drosophila melanogaster AT29264 full insert cDNA
          Length = 2897

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 12  gctcaaggagaacatcgctgc 32
           |||||||||||||||||||||
Sbjct: 299 gctcaaggagaacatcgctgc 319
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>gb|AC100809.9| Homo sapiens chromosome 8, clone CTC-493P15, complete sequence
          Length = 184851

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 383    aaaaatcttccaatggagatg 403
              |||||||||||||||||||||
Sbjct: 148533 aaaaatcttccaatggagatg 148513
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>gb|AC134575.3| Mus musculus BAC clone RP24-67I21 from chromosome 14, complete sequence
          Length = 172103

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 437   tctgtgatcttgaggaagatg 457
             |||||||||||||||||||||
Sbjct: 56516 tctgtgatcttgaggaagatg 56496
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>emb|BX530055.9| Mouse DNA sequence from clone RP23-462G16 on chromosome X, complete
             sequence
          Length = 168373

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 382   gaaaaatcttccaatggagat 402
             |||||||||||||||||||||
Sbjct: 12540 gaaaaatcttccaatggagat 12520
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>gb|AE003671.4| Drosophila melanogaster chromosome 3R, section 13 of 118 of the complete
              sequence
          Length = 315844

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 12     gctcaaggagaacatcgctgc 32
              |||||||||||||||||||||
Sbjct: 192219 gctcaaggagaacatcgctgc 192199
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 10     acgctcaaggagaacatcgctgcg 33
              ||||||| ||||||||||||||||
Sbjct: 958997 acgctcacggagaacatcgctgcg 959020
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>gb|AC092214.3| Homo sapiens BAC clone RP11-811J9 from 7, complete sequence
          Length = 72045

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   tgacaggaactgtatgggaa 240
             ||||||||||||||||||||
Sbjct: 37393 tgacaggaactgtatgggaa 37412
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>ref|XM_533225.2| PREDICTED: Canis familiaris similar to sperm-associated cation
           channel 1 (LOC476016), mRNA
          Length = 1493

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 447 tgaggaagatgaaggcttca 466
           ||||||||||||||||||||
Sbjct: 403 tgaggaagatgaaggcttca 384
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>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 138    ggattccagcttctcgttgt 157
              ||||||||||||||||||||
Sbjct: 178708 ggattccagcttctcgttgt 178727
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>emb|AL731796.4| Human DNA sequence from clone RP13-344M15 on chromosome X, complete
             sequence
          Length = 25801

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 410   tgagcttttcagataaagat 429
             ||||||||||||||||||||
Sbjct: 23380 tgagcttttcagataaagat 23399
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>emb|AL035665.32|HS644L1 Human DNA sequence from clone RP4-644L1 on chromosome 20q12 Contains
             the MAFB gene for v-maf musculoaponeurotic fibrosarcoma
             oncogene homolog B (avian), a novel gene and two CpG
             islands, complete sequence
          Length = 145593

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   aatcatacctccagtgacag 226
             ||||||||||||||||||||
Sbjct: 15904 aatcatacctccagtgacag 15923
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>gb|AC129928.3| Homo sapiens chromosome 8, clone RP11-1112C19, complete sequence
          Length = 141478

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    caatgtcctgcagggtttcc 58
             ||||||||||||||||||||
Sbjct: 41356 caatgtcctgcagggtttcc 41337
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>emb|AJ621746.1| Gallus gallus partial P4HA2 gene exons 1-14 and partial RIL gene exons
             1-3, BAC bCHORI92M14 clone, contig 7
          Length = 76796

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    tttccttttggcttgccatg 73
             ||||||||||||||||||||
Sbjct: 32974 tttccttttggcttgccatg 32955
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>gb|AC011498.7| Homo sapiens chromosome 19 clone CTB-50L17, complete sequence
          Length = 273403

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 457    gaaggcttcactgaggaggagata 480
              ||||||||||||||||||| ||||
Sbjct: 221862 gaaggcttcactgaggaggtgata 221885
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>gb|AC009404.5| Homo sapiens BAC clone RP11-28H22 from 2, complete sequence
          Length = 112883

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   gatgataccagagctgaaaa 386
             ||||||||||||||||||||
Sbjct: 68808 gatgataccagagctgaaaa 68827
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>gb|AC073895.22| Homo sapiens 3 BAC RP11-622L21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 167311

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    caatgtcctgcagggtttcc 58
             ||||||||||||||||||||
Sbjct: 78943 caatgtcctgcagggtttcc 78924
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>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 414     cttttcagataaagatgaat 433
               ||||||||||||||||||||
Sbjct: 3491532 cttttcagataaagatgaat 3491551
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>gb|AF075004.1|HUMYH97G12 Homo sapiens full length insert cDNA YH97G12
          Length = 622

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 221 tgacaggaactgtatgggaa 240
           ||||||||||||||||||||
Sbjct: 461 tgacaggaactgtatgggaa 480
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>dbj|AP005362.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1574E2, complete
              sequence
          Length = 219049

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 39     caatgtcctgcagggtttcc 58
              ||||||||||||||||||||
Sbjct: 212551 caatgtcctgcagggtttcc 212570
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>dbj|AP003694.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1931E2, complete
             sequence
          Length = 159287

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    caatgtcctgcagggtttcc 58
             ||||||||||||||||||||
Sbjct: 25617 caatgtcctgcagggtttcc 25636
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>dbj|AB065453.1| Homo sapiens gene for seven transmembrane helix receptor,
             isolate:CBRC7TM_16
          Length = 44312

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   gatgataccagagctgaaaa 386
             ||||||||||||||||||||
Sbjct: 27209 gatgataccagagctgaaaa 27228
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>emb|AL627185.10| Mouse DNA sequence from clone RP23-332E2 on chromosome 4, complete
             sequence
          Length = 120180

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   gtgacaggaactgtatggga 239
             ||||||||||||||||||||
Sbjct: 33977 gtgacaggaactgtatggga 33996


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,861,438
Number of Sequences: 3902068
Number of extensions: 4861438
Number of successful extensions: 87867
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87741
Number of HSP's gapped (non-prelim): 121
length of query: 538
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 515
effective length of database: 17,143,297,704
effective search space: 8828798317560
effective search space used: 8828798317560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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