| Clone Name | bags19p08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_449984.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1160 Score = 587 bits (296), Expect = e-164 Identities = 428/472 (90%) Strand = Plus / Plus Query: 57 acgatgctgcccacgacggcgtccaagggccggggggccgcccgctccgccccgccgctc 116 |||||||||||||||||||||||||| || || || ||||||||||| || ||||||||| Sbjct: 64 acgatgctgcccacgacggcgtccaaagggcgcggcgccgcccgctctgcgccgccgctc 123 Query: 117 ttcggtccgtatctccgccgtattgtcaagtggcagcaaatggatatcgaatacacgttt 176 ||||| || || |||||||| || ||||||||||| |||||||||||||| ||||| ||| Sbjct: 124 ttcggcccctacctccgccgcatcgtcaagtggcaacaaatggatatcgagtacacattt 183 Query: 177 tggcaaatggttcatctttgtacttcaccaaaagtagtctaccagcacaccaaatatcac 236 ||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 184 tggcaaatggtccatctctgtacttcaccaaaagtagtctatcagcacaccaaatatcac 243 Query: 237 aagcaaacaaagaaccagtgggctcgggatgatcctgcatttattgtcattctaattctt 296 |||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 244 aagcaaacaaagaatcagtgggctcgggatgatcctgcttttgttgtcattctaattctt 303 Query: 297 ttccttgtgtttgcgacatcagcttactgtgcagcgtttggagagagtgcgccccatgct 356 |||||||||||||| |||||||||||||||||||||| |||||||||| | | |||||| Sbjct: 304 ttccttgtgtttgcaacatcagcttactgtgcagcgtatggagagagtccttcacatgct 363 Query: 357 gctttaacaatcatctcggttgtgtttgtccatttcttgtttgctgggctagttttggcc 416 ||||||||||||| || |||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 364 gctttaacaatcacttcagttgtgcttgtccatttcttgtttgctgggatagttctggcc 423 Query: 417 acactttgctggtttcttaccaattcttatctgagggaggaacctaatagccatgtggtc 476 |||||||||||||||||||| |||||||| |||||||||||||||| || |||||||| Sbjct: 424 acactttgctggtttcttacaaattcttacttgagggaggaacctaacagtcatgtggtt 483 Query: 477 gaacagcgtgtcgagtggctgtatgcatttgatgttcactgcaactcgttct 528 || || ||||| |||||||| ||||||||||||||||| |||||||| |||| Sbjct: 484 gagcaacgtgtggagtggctctatgcatttgatgttcattgcaactcattct 535
>dbj|AK067482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107E18, full insert sequence Length = 1160 Score = 587 bits (296), Expect = e-164 Identities = 428/472 (90%) Strand = Plus / Plus Query: 57 acgatgctgcccacgacggcgtccaagggccggggggccgcccgctccgccccgccgctc 116 |||||||||||||||||||||||||| || || || ||||||||||| || ||||||||| Sbjct: 64 acgatgctgcccacgacggcgtccaaagggcgcggcgccgcccgctctgcgccgccgctc 123 Query: 117 ttcggtccgtatctccgccgtattgtcaagtggcagcaaatggatatcgaatacacgttt 176 ||||| || || |||||||| || ||||||||||| |||||||||||||| ||||| ||| Sbjct: 124 ttcggcccctacctccgccgcatcgtcaagtggcaacaaatggatatcgagtacacattt 183 Query: 177 tggcaaatggttcatctttgtacttcaccaaaagtagtctaccagcacaccaaatatcac 236 ||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 184 tggcaaatggtccatctctgtacttcaccaaaagtagtctatcagcacaccaaatatcac 243 Query: 237 aagcaaacaaagaaccagtgggctcgggatgatcctgcatttattgtcattctaattctt 296 |||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 244 aagcaaacaaagaatcagtgggctcgggatgatcctgcttttgttgtcattctaattctt 303 Query: 297 ttccttgtgtttgcgacatcagcttactgtgcagcgtttggagagagtgcgccccatgct 356 |||||||||||||| |||||||||||||||||||||| |||||||||| | | |||||| Sbjct: 304 ttccttgtgtttgcaacatcagcttactgtgcagcgtatggagagagtccttcacatgct 363 Query: 357 gctttaacaatcatctcggttgtgtttgtccatttcttgtttgctgggctagttttggcc 416 ||||||||||||| || |||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 364 gctttaacaatcacttcagttgtgcttgtccatttcttgtttgctgggatagttctggcc 423 Query: 417 acactttgctggtttcttaccaattcttatctgagggaggaacctaatagccatgtggtc 476 |||||||||||||||||||| |||||||| |||||||||||||||| || |||||||| Sbjct: 424 acactttgctggtttcttacaaattcttacttgagggaggaacctaacagtcatgtggtt 483 Query: 477 gaacagcgtgtcgagtggctgtatgcatttgatgttcactgcaactcgttct 528 || || ||||| |||||||| ||||||||||||||||| |||||||| |||| Sbjct: 484 gagcaacgtgtggagtggctctatgcatttgatgttcattgcaactcattct 535
>gb|AY106513.1| Zea mays PCO112383 mRNA sequence Length = 1354 Score = 559 bits (282), Expect = e-156 Identities = 423/470 (90%) Strand = Plus / Plus Query: 59 gatgctgcccacgacggcgtccaagggccggggggccgcccgctccgccccgccgctctt 118 ||||||||| ||||| ||||||||||| || |||||| |||||||||||||||||||||| Sbjct: 195 gatgctgccgacgaccgcgtccaaggggcgcggggcctcccgctccgccccgccgctctt 254 Query: 119 cggtccgtatctccgccgtattgtcaagtggcagcaaatggatatcgaatacacgttttg 178 |||||| || |||||||| || ||||||||||| ||||||||||| |||||||| ||||| Sbjct: 255 cggtccctacctccgccgcatcgtcaagtggcaacaaatggatattgaatacacattttg 314 Query: 179 gcaaatggttcatctttgtacttcaccaaaagtagtctaccagcacaccaaatatcacaa 238 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 315 gcaaatggttcatctctgtacttcaccaaaagtagtctatcagcacaccaaatatcacaa 374 Query: 239 gcaaacaaagaaccagtgggctcgggatgatcctgcatttattgtcattctaattctttt 298 ||||||||||||||||||||| || ||||||||||||||| |||| ||||| |||||||| Sbjct: 375 gcaaacaaagaaccagtgggcccgtgatgatcctgcatttgttgttattctgattctttt 434 Query: 299 ccttgtgtttgcgacatcagcttactgtgcagcgtttggagagagtgcgccccatgctgc 358 ||| |||||||| |||||||||||||||||||| | |||||||||||| | |||||||| Sbjct: 435 cctcgtgtttgcaacatcagcttactgtgcagcatatggagagagtgcctcacatgctgc 494 Query: 359 tttaacaatcatctcggttgtgtttgtccatttcttgtttgctgggctagttttggccac 418 | ||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 495 tctaacaatcacttcggttgtgtttctccatttcttgtttgctgggatagttttggccac 554 Query: 419 actttgctggtttcttaccaattcttatctgagggaggaacctaatagccatgtggtcga 478 |||||||||||| ||||| |||||||| |||| ||||||||||| |||||||| || || Sbjct: 555 actttgctggttccttacaaattcttacttgagagaggaacctaacagccatgttgttga 614 Query: 479 acagcgtgtcgagtggctgtatgcatttgatgttcactgcaactcgttct 528 || || || |||||||| ||||||||||| ||||| || |||||||||| Sbjct: 615 gcaacgcgtggagtggctctatgcatttgacgttcattgtaactcgttct 664
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 153 bits (77), Expect = 7e-34 Identities = 89/93 (95%) Strand = Plus / Minus Query: 241 aaacaaagaaccagtgggctcgggatgatcctgcatttattgtcattctaattcttttcc 300 |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 804563 aaacaaagaatcagtgggctcgggatgatcctgcttttgttgtcattctaattcttttcc 804504 Query: 301 ttgtgtttgcgacatcagcttactgtgcagcgt 333 |||||||||| |||||||||||||||||||||| Sbjct: 804503 ttgtgtttgcaacatcagcttactgtgcagcgt 804471 Score = 109 bits (55), Expect = 9e-21 Identities = 73/79 (92%) Strand = Plus / Minus Query: 351 catgctgctttaacaatcatctcggttgtgtttgtccatttcttgtttgctgggctagtt 410 ||||||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| Sbjct: 804207 catgctgctttaacaatcacttcagttgtgcttgtccatttcttgtttgctgggatagtt 804148 Query: 411 ttggccacactttgctggt 429 |||||||||||||||||| Sbjct: 804147 ctggccacactttgctggt 804129 Score = 99.6 bits (50), Expect = 9e-18 Identities = 65/70 (92%) Strand = Plus / Minus Query: 145 agtggcagcaaatggatatcgaatacacgttttggcaaatggttcatctttgtacttcac 204 ||||||| |||||||||||||| ||||| |||||||||||||| ||||| |||||||||| Sbjct: 806092 agtggcaacaaatggatatcgagtacacattttggcaaatggtccatctctgtacttcac 806033 Query: 205 caaaagtagt 214 |||||||||| Sbjct: 806032 caaaagtagt 806023 Score = 91.7 bits (46), Expect = 2e-15 Identities = 79/90 (87%) Strand = Plus / Minus Query: 57 acgatgctgcccacgacggcgtccaagggccggggggccgcccgctccgccccgccgctc 116 |||||||||||||||||||||||||| || || || ||||||||||| || ||||||||| Sbjct: 807130 acgatgctgcccacgacggcgtccaaagggcgcggcgccgcccgctctgcgccgccgctc 807071 Query: 117 ttcggtccgtatctccgccgtattgtcaag 146 ||||| || || |||||||| || |||||| Sbjct: 807070 ttcggcccctacctccgccgcatcgtcaag 807041 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 427 ggtttcttaccaattcttatctgagggaggaacctaatagccatgtggtcgaacagcgtg 486 |||||||||| |||||||| |||||||||||||||| || |||||||| || || |||| Sbjct: 802795 ggtttcttacaaattcttacttgagggaggaacctaacagtcatgtggttgagcaacgtg 802736 Query: 487 tcgagtgg 494 | |||||| Sbjct: 802735 tggagtgg 802728 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Minus Query: 493 ggctgtatgcatttgatgttcactgcaactcgttct 528 |||| ||||||||||||||||| |||||||| |||| Sbjct: 802448 ggctctatgcatttgatgttcattgcaactcattct 802413 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 379 tgtttgtccatttcttgtttgctgggctagttttggcca 417 |||||||||||| |||||||| |||| ||||| |||||| Sbjct: 757569 tgtttgtccattccttgtttgttgggatagttctggcca 757531 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 219 cagcacaccaaatatcacaagc 240 |||||||||||||||||||||| Sbjct: 805257 cagcacaccaaatatcacaagc 805236
>dbj|AP005787.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0501E09 Length = 150604 Score = 153 bits (77), Expect = 7e-34 Identities = 89/93 (95%) Strand = Plus / Minus Query: 241 aaacaaagaaccagtgggctcgggatgatcctgcatttattgtcattctaattcttttcc 300 |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 89902 aaacaaagaatcagtgggctcgggatgatcctgcttttgttgtcattctaattcttttcc 89843 Query: 301 ttgtgtttgcgacatcagcttactgtgcagcgt 333 |||||||||| |||||||||||||||||||||| Sbjct: 89842 ttgtgtttgcaacatcagcttactgtgcagcgt 89810 Score = 109 bits (55), Expect = 9e-21 Identities = 73/79 (92%) Strand = Plus / Minus Query: 351 catgctgctttaacaatcatctcggttgtgtttgtccatttcttgtttgctgggctagtt 410 ||||||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| Sbjct: 89546 catgctgctttaacaatcacttcagttgtgcttgtccatttcttgtttgctgggatagtt 89487 Query: 411 ttggccacactttgctggt 429 |||||||||||||||||| Sbjct: 89486 ctggccacactttgctggt 89468 Score = 99.6 bits (50), Expect = 9e-18 Identities = 65/70 (92%) Strand = Plus / Minus Query: 145 agtggcagcaaatggatatcgaatacacgttttggcaaatggttcatctttgtacttcac 204 ||||||| |||||||||||||| ||||| |||||||||||||| ||||| |||||||||| Sbjct: 91431 agtggcaacaaatggatatcgagtacacattttggcaaatggtccatctctgtacttcac 91372 Query: 205 caaaagtagt 214 |||||||||| Sbjct: 91371 caaaagtagt 91362 Score = 91.7 bits (46), Expect = 2e-15 Identities = 79/90 (87%) Strand = Plus / Minus Query: 57 acgatgctgcccacgacggcgtccaagggccggggggccgcccgctccgccccgccgctc 116 |||||||||||||||||||||||||| || || || ||||||||||| || ||||||||| Sbjct: 92469 acgatgctgcccacgacggcgtccaaagggcgcggcgccgcccgctctgcgccgccgctc 92410 Query: 117 ttcggtccgtatctccgccgtattgtcaag 146 ||||| || || |||||||| || |||||| Sbjct: 92409 ttcggcccctacctccgccgcatcgtcaag 92380 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 427 ggtttcttaccaattcttatctgagggaggaacctaatagccatgtggtcgaacagcgtg 486 |||||||||| |||||||| |||||||||||||||| || |||||||| || || |||| Sbjct: 88134 ggtttcttacaaattcttacttgagggaggaacctaacagtcatgtggttgagcaacgtg 88075 Query: 487 tcgagtgg 494 | |||||| Sbjct: 88074 tggagtgg 88067 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Minus Query: 493 ggctgtatgcatttgatgttcactgcaactcgttct 528 |||| ||||||||||||||||| |||||||| |||| Sbjct: 87787 ggctctatgcatttgatgttcattgcaactcattct 87752 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 379 tgtttgtccatttcttgtttgctgggctagttttggcca 417 |||||||||||| |||||||| |||| ||||| |||||| Sbjct: 42908 tgtttgtccattccttgtttgttgggatagttctggcca 42870 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 219 cagcacaccaaatatcacaagc 240 |||||||||||||||||||||| Sbjct: 90596 cagcacaccaaatatcacaagc 90575
>ref|NM_127085.3| Arabidopsis thaliana unknown protein AT2G15240 mRNA, complete cds Length = 1315 Score = 97.6 bits (49), Expect = 4e-17 Identities = 124/149 (83%) Strand = Plus / Plus Query: 135 cgtattgtcaagtggcagcaaatggatatcgaatacacgttttggcaaatggttcatctt 194 ||||| || |||||||||||||||||| | ||||| || || ||||||||| || | ||| Sbjct: 180 cgtatcgttaagtggcagcaaatggatgttgaatatactttctggcaaatgcttaacctt 239 Query: 195 tgtacttcaccaaaagtagtctaccagcacaccaaatatcacaagcaaacaaagaaccag 254 ||||| || || ||||| ||||| || ||||| || |||||||| ||||| |||||||| Sbjct: 240 tgtacatctccgaaagttgtctatcaacacactaagtatcacaaacaaactaagaaccaa 299 Query: 255 tgggctcgggatgatcctgcatttattgt 283 ||||| || ||||| ||||| |||||||| Sbjct: 300 tgggcacgtgatgaccctgcgtttattgt 328 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 468 catgtggtcgaacagcgtgtcgagtggctgtatgcatttgatgttcactgcaactcgttc 527 |||||||| ||||| || || || ||||||||| |||||||||||||||||||||||||| Sbjct: 516 catgtggtggaacaacgcgttgaatggctgtatacatttgatgttcactgcaactcgttc 575 Query: 528 t 528 | Sbjct: 576 t 576
>gb|AY052736.1| Arabidopsis thaliana At2g15240/F15A23.2 mRNA, complete cds Length = 759 Score = 97.6 bits (49), Expect = 4e-17 Identities = 124/149 (83%) Strand = Plus / Plus Query: 135 cgtattgtcaagtggcagcaaatggatatcgaatacacgttttggcaaatggttcatctt 194 ||||| || |||||||||||||||||| | ||||| || || ||||||||| || | ||| Sbjct: 79 cgtatcgttaagtggcagcaaatggatgttgaatatactttctggcaaatgcttaacctt 138 Query: 195 tgtacttcaccaaaagtagtctaccagcacaccaaatatcacaagcaaacaaagaaccag 254 ||||| || || ||||| ||||| || ||||| || |||||||| ||||| |||||||| Sbjct: 139 tgtacatctccgaaagttgtctatcaacacactaagtatcacaaacaaactaagaaccaa 198 Query: 255 tgggctcgggatgatcctgcatttattgt 283 ||||| || ||||| ||||| |||||||| Sbjct: 199 tgggcacgtgatgaccctgcgtttattgt 227 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 468 catgtggtcgaacagcgtgtcgagtggctgtatgcatttgatgttcactgcaactcgttc 527 |||||||| ||||| || || || ||||||||| |||||||||||||||||||||||||| Sbjct: 415 catgtggtggaacaacgcgttgaatggctgtatacatttgatgttcactgcaactcgttc 474 Query: 528 t 528 | Sbjct: 475 t 475
>gb|AF378872.1|AF378872 Arabidopsis thaliana At2g15240/F15A23.2 mRNA, complete cds Length = 1155 Score = 97.6 bits (49), Expect = 4e-17 Identities = 124/149 (83%) Strand = Plus / Plus Query: 135 cgtattgtcaagtggcagcaaatggatatcgaatacacgttttggcaaatggttcatctt 194 ||||| || |||||||||||||||||| | ||||| || || ||||||||| || | ||| Sbjct: 158 cgtatcgttaagtggcagcaaatggatgttgaatatactttctggcaaatgcttaacctt 217 Query: 195 tgtacttcaccaaaagtagtctaccagcacaccaaatatcacaagcaaacaaagaaccag 254 ||||| || || ||||| ||||| || ||||| || |||||||| ||||| |||||||| Sbjct: 218 tgtacatctccgaaagttgtctatcaacacactaagtatcacaaacaaactaagaaccaa 277 Query: 255 tgggctcgggatgatcctgcatttattgt 283 ||||| || ||||| ||||| |||||||| Sbjct: 278 tgggcacgtgatgaccctgcgtttattgt 306 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 468 catgtggtcgaacagcgtgtcgagtggctgtatgcatttgatgttcactgcaactcgttc 527 |||||||| ||||| || || || ||||||||| |||||||||||||||||||||||||| Sbjct: 494 catgtggtggaacaacgcgttgaatggctgtatacatttgatgttcactgcaactcgttc 553 Query: 528 t 528 | Sbjct: 554 t 554
>emb|BX820218.1|CNS0AA37 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS95ZC04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1312 Score = 97.6 bits (49), Expect = 4e-17 Identities = 124/149 (83%) Strand = Plus / Plus Query: 135 cgtattgtcaagtggcagcaaatggatatcgaatacacgttttggcaaatggttcatctt 194 ||||| || |||||||||||||||||| | ||||| || || ||||||||| || | ||| Sbjct: 180 cgtatcgttaagtggcagcaaatggatgttgaatatactttctggcaaatgcttaacctt 239 Query: 195 tgtacttcaccaaaagtagtctaccagcacaccaaatatcacaagcaaacaaagaaccag 254 ||||| || || ||||| ||||| || ||||| || |||||||| ||||| |||||||| Sbjct: 240 tgtacatctccgaaagttgtctatcaacacactaagtatcacaaacaaactaagaaccaa 299 Query: 255 tgggctcgggatgatcctgcatttattgt 283 ||||| || ||||| ||||| |||||||| Sbjct: 300 tgggcacgtgatgaccctgcgtttattgt 328 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 468 catgtggtcgaacagcgtgtcgagtggctgtatgcatttgatgttcactgcaactcgttc 527 |||||||| ||||| || || || ||||||||| |||||||||||||||||||||||||| Sbjct: 516 catgtggtggaacaacgcgttgaatggctgtatacatttgatgttcactgcaactcgttc 575 Query: 528 t 528 | Sbjct: 576 t 576
>gb|AY084886.1| Arabidopsis thaliana clone 120231 mRNA, complete sequence Length = 1236 Score = 97.6 bits (49), Expect = 4e-17 Identities = 124/149 (83%) Strand = Plus / Plus Query: 135 cgtattgtcaagtggcagcaaatggatatcgaatacacgttttggcaaatggttcatctt 194 ||||| || |||||||||||||||||| | ||||| || || ||||||||| || | ||| Sbjct: 157 cgtatcgttaagtggcagcaaatggatgttgaatatactttctggcaaatgcttaacctt 216 Query: 195 tgtacttcaccaaaagtagtctaccagcacaccaaatatcacaagcaaacaaagaaccag 254 ||||| || || ||||| ||||| || ||||| || |||||||| ||||| |||||||| Sbjct: 217 tgtacatctccgaaagttgtctatcaacacactaagtatcacaaacaaactaagaaccaa 276 Query: 255 tgggctcgggatgatcctgcatttattgt 283 ||||| || ||||| ||||| |||||||| Sbjct: 277 tgggcacgtgatgaccctgcgtttattgt 305 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 468 catgtggtcgaacagcgtgtcgagtggctgtatgcatttgatgttcactgcaactcgttc 527 |||||||| ||||| || || || ||||||||| |||||||||||||||||||||||||| Sbjct: 493 catgtggtggaacaacgcgttgaatggctgtatacatttgatgttcactgcaactcgttc 552 Query: 528 t 528 | Sbjct: 553 t 553
>dbj|AP006404.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT43G19, TM0290, complete sequence Length = 125592 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 145 agtggcagcaaatggatatcgaatacacgttttggcaaatggttcatctttgtacttcac 204 ||||||| ||||||||||||||||| || |||||||||||| ||||||| ||||| ||| Sbjct: 99448 agtggcaacaaatggatatcgaatatactttttggcaaatgtttcatctatgtacggcac 99507 Query: 205 caaaagt 211 ||||||| Sbjct: 99508 caaaagt 99514 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 496 tgtatgcatttgatgttcactgcaactcgttct 528 |||||||||||||||| ||||||||||| |||| Sbjct: 102451 tgtatgcatttgatgtgcactgcaactctttct 102483
>gb|AC006298.13| Arabidopsis thaliana chromosome 2 clone F15A23 map mi398, complete sequence Length = 57564 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 493 ggctgtatgcatttgatgttcactgcaactcgttct 528 |||||||| ||||||||||||||||||||||||||| Sbjct: 3809 ggctgtatacatttgatgttcactgcaactcgttct 3844 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 145 agtggcagcaaatggatatcgaatacacgttttggcaaatggttcatctttgtac 199 ||||||||||||||||| | ||||| || || ||||||||| || | |||||||| Sbjct: 2068 agtggcagcaaatggatgttgaatatactttctggcaaatgcttaacctttgtac 2122
>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome Length = 156789 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Minus Query: 87 cggggggccgcccgctccgccccgccgc 114 |||||||||| ||||||||||||||||| Sbjct: 124077 cggggggccggccgctccgccccgccgc 124050 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Plus Query: 87 cggggggccgcccgctccgccccgccgc 114 |||||||||| ||||||||||||||||| Sbjct: 1781 cggggggccggccgctccgccccgccgc 1808
>dbj|AP005591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0584E12 Length = 159071 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 379 tgtttgtccatttcttgtttgctgggctagttttggcca 417 |||||||||||| |||||||| |||| ||||| |||||| Sbjct: 130110 tgtttgtccattccttgtttgttgggatagttctggcca 130072
>gb|AC152002.2| Ornithorhynchus anatinus chromosome UNK clone OABb-387A1, complete sequence Length = 131214 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 31 agcagcagaaggaaggagaggggagaa 57 ||||||||||| ||||||||||||||| Sbjct: 26862 agcagcagaagaaaggagaggggagaa 26888
>emb|CR377166.1| Circular plasmid pWCFS103 from Lactobacillus plantarum WCFS1 Length = 36069 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 228 aaatatcacaagcaaacaaagaacca 253 |||||||||||||| ||||||||||| Sbjct: 5818 aaatatcacaagcacacaaagaacca 5793
>gb|AF242860.1|AF242860 Trypanosoma cruzi clone cosmid 1K19 NPK-1 protein kinase-like protein gene, complete cds; and unknown genes Length = 39465 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 agcagaaggaaggagaggggag 55 |||||||||||||||||||||| Sbjct: 18936 agcagaaggaaggagaggggag 18957
>gb|AC162291.13| Mus musculus chromosome 18, clone RP23-264B14, complete sequence Length = 198736 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 cagcagaaggaaggagagggg 53 ||||||||||||||||||||| Sbjct: 75135 cagcagaaggaaggagagggg 75115
>gb|AC152394.11| Mus musculus chromosome 15, clone RP23-100K19, complete sequence Length = 203260 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 agaaggaaggagaggggagaa 57 ||||||||||||||||||||| Sbjct: 92009 agaaggaaggagaggggagaa 91989
>emb|CR722446.2|CNS0GKDW Tetraodon nigroviridis full-length cDNA Length = 720 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 243 acaaagaaccagtgggctcgggatgatcctgcatttattgt 283 |||||| |||||||||| ||||||||||||| ||| |||| Sbjct: 284 acaaaggaccagtgggccagggatgatcctgcctttcttgt 324
>emb|CR703154.2|CNS0G5I6 Tetraodon nigroviridis full-length cDNA Length = 680 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 243 acaaagaaccagtgggctcgggatgatcctgcatttattgt 283 |||||| |||||||||| ||||||||||||| ||| |||| Sbjct: 247 acaaaggaccagtgggccagggatgatcctgcctttcttgt 287
>emb|CR682277.2|CNS0FPE9 Tetraodon nigroviridis full-length cDNA Length = 671 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 243 acaaagaaccagtgggctcgggatgatcctgcatttattgt 283 |||||| |||||||||| ||||||||||||| ||| |||| Sbjct: 237 acaaaggaccagtgggccagggatgatcctgcctttcttgt 277
>gb|CP000235.1| Anaplasma phagocytophilum HZ, complete genome Length = 1471282 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 tctttgtacttcaccaaaagt 211 ||||||||||||||||||||| Sbjct: 634724 tctttgtacttcaccaaaagt 634744
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 cgtccaagggccggggggccg 96 ||||||||||||||||||||| Sbjct: 3699737 cgtccaagggccggggggccg 3699717
>dbj|AK031963.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330513E13 product:hypothetical protein, full insert sequence Length = 3477 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 cagcagaaggaaggagagggg 53 ||||||||||||||||||||| Sbjct: 2849 cagcagaaggaaggagagggg 2869
>gb|AF466200.2| Sorghum bicolor putative protein kinase gene, partial cds; putative Cf-2, fertilization-independent endosperm proteins, hypothetical protein, putative non-LTR retroelement reverse transcriptase, OCL5 protein, tryptophan synthase beta-subunit, hypothetical proteins, putative AP endonuclease, putative RNA polymerase II complex component SRB7, putative beta-1,3-glucanase, hypothetical protein, TNP2-like protein, hypothetical protein, putative phosphate/phosphoenolpyruvate translocator, putative protein, hypothetical proteins, putative galactosyltransferase family, hypothetical protein, putative cytochrome P450 family, putative lipid transfer protein, putative photoreceptor-interacting protein, and hypothetical protein genes, complete cds; and hypothetical protein gene, partial cds Length = 202197 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 catttgatgttcactgcaact 522 ||||||||||||||||||||| Sbjct: 55008 catttgatgttcactgcaact 54988
>gb|AC154040.7| Mus musculus 10 BAC RP23-348E15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210862 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 28 aggagcagcagaaggaaggagaggggaga 56 ||||| |||||||||||| |||||||||| Sbjct: 49895 aggagaagcagaaggaagaagaggggaga 49923
>dbj|AP006688.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT16L14, TM0383, complete sequence Length = 81488 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 496 tgtatgcatttgatgttcactgcaactcgttct 528 ||||||||| |||||| ||||||||||| |||| Sbjct: 11118 tgtatgcatctgatgtgcactgcaactctttct 11150
>emb|AL356807.3|CNS05TDP Human chromosome 14 DNA sequence BAC C-2335K5 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 124620 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 agaaggaaggagaggggagaa 57 ||||||||||||||||||||| Sbjct: 59292 agaaggaaggagaggggagaa 59272
>gb|AC144927.5| Mus musculus chromosome 5, clone RP23-464P20, complete sequence Length = 192593 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 gaaggaaggagaggggagaa 57 |||||||||||||||||||| Sbjct: 146583 gaaggaaggagaggggagaa 146564
>gb|AY771214.1| Zea mays RFLP probe umc6 (CBM 2.03) genomic sequence Length = 604 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 gctgcccacgacggcgtcca 81 |||||||||||||||||||| Sbjct: 344 gctgcccacgacggcgtcca 363
>ref|XM_515186.1| PREDICTED: Pan troglodytes similar to PARVB protein (LOC458898), mRNA Length = 1471 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gtggtcgaacagcgtgtcga 490 |||||||||||||||||||| Sbjct: 790 gtggtcgaacagcgtgtcga 771
>ref|NM_001030601.1| Gallus gallus IMP (inosine monophosphate) dehydrogenase 2 (IMPDH2), mRNA Length = 1867 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 gccgcccgctccgccccgcc 112 |||||||||||||||||||| Sbjct: 69 gccgcccgctccgccccgcc 50
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gcagcggcagcggatcgcga 20 |||||||||||||||||||| Sbjct: 2032317 gcagcggcagcggatcgcga 2032298
>ref|NM_001003828.1| Homo sapiens parvin, beta (PARVB), transcript variant 1, mRNA Length = 1808 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gtggtcgaacagcgtgtcga 490 |||||||||||||||||||| Sbjct: 891 gtggtcgaacagcgtgtcga 872
>ref|NM_013327.3| Homo sapiens parvin, beta (PARVB), transcript variant 2, mRNA Length = 1713 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gtggtcgaacagcgtgtcga 490 |||||||||||||||||||| Sbjct: 796 gtggtcgaacagcgtgtcga 777
>gb|AC153147.7| Mus musculus BAC clone RP23-205D14 from chromosome 12, complete sequence Length = 206281 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 acaccaaatatcacaagcaa 242 |||||||||||||||||||| Sbjct: 131830 acaccaaatatcacaagcaa 131849
>gb|BC046103.1| Homo sapiens parvin, beta, mRNA (cDNA clone MGC:57521 IMAGE:5763848), complete cds Length = 1691 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gtggtcgaacagcgtgtcga 490 |||||||||||||||||||| Sbjct: 774 gtggtcgaacagcgtgtcga 755
>gb|AC163346.3| Mus musculus BAC clone RP23-370A2 from chromosome 6, complete sequence Length = 173936 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 agaaggaaggagaggggaga 56 |||||||||||||||||||| Sbjct: 93804 agaaggaaggagaggggaga 93823
>ref|XM_567471.1| Cryptococcus neoformans var. neoformans JEC21 transport-related protein (CNJ00910) partial mRNA Length = 1014 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 232 atcacaagcaaacaaagaaccagtgggc 259 ||||||||||||| ||||| |||||||| Sbjct: 326 atcacaagcaaacgaagaatcagtgggc 353
>gb|AC133784.2| Homo sapiens BAC clone RP11-20G1 from 2, complete sequence Length = 67535 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 tgtcattctaattcttttcc 300 |||||||||||||||||||| Sbjct: 2669 tgtcattctaattcttttcc 2650
>gb|AY372819.1| Sorghum bicolor P-glycoprotein 1 (PGP1) gene, PGP1-Dw3-T allele, complete cds Length = 6827 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gcagcggcagcggatcgcga 20 |||||||||||||||||||| Sbjct: 6430 gcagcggcagcggatcgcga 6449
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 gaaggaaggagaggggagaa 57 |||||||||||||||||||| Sbjct: 42251 gaaggaaggagaggggagaa 42232
>gb|AY366085.1| Zea mays cultivar B73 PGP1 (pgp1) gene, complete cds Length = 7139 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gcagcggcagcggatcgcga 20 |||||||||||||||||||| Sbjct: 6365 gcagcggcagcggatcgcga 6384
>gb|AC091624.3| Canis familiaris clone RP81-117B1, complete sequence Length = 174712 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 gccgcccgctccgccccgcc 112 |||||||||||||||||||| Sbjct: 19071 gccgcccgctccgccccgcc 19052
>emb|AL672138.10| Human DNA sequence from clone RP13-313G19 on chromosome X Contains the 5' end of the OPHN1 gene for oligophrenin, a nudE nuclear distribution gene E homolog like 1 (NDEL1) pseudogene, the 5' end of the gene for a novel protein (MGC21416) and two CpG islands, complete sequence Length = 174534 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 agaaggaaggagaggggaga 56 |||||||||||||||||||| Sbjct: 51305 agaaggaaggagaggggaga 51324
>emb|AL031595.4|HS671O14 Human DNA sequence from clone RP4-671O14 on chromosome 22q13.2-13.33, complete sequence Length = 102739 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gtggtcgaacagcgtgtcga 490 |||||||||||||||||||| Sbjct: 2587 gtggtcgaacagcgtgtcga 2568
>gb|AC158975.9| Mus musculus chromosome 18, clone RP24-192J22, complete sequence Length = 178651 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 gcagcagaaggaaggagaggggag 55 |||||||||||||||||| ||||| Sbjct: 108661 gcagcagaaggaaggagaagggag 108684
>emb|AJ851396.1| Gallus gallus mRNA for hypothetical protein, clone 1j11 Length = 1867 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 gccgcccgctccgccccgcc 112 |||||||||||||||||||| Sbjct: 69 gccgcccgctccgccccgcc 50
>emb|AJ719753.1| Gallus gallus mRNA for hypothetical protein, clone 6c2 Length = 714 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 gccgcccgctccgccccgcc 112 |||||||||||||||||||| Sbjct: 86 gccgcccgctccgccccgcc 67
>emb|CR626839.1| full-length cDNA clone CS0DF011YH13 of Fetal brain of Homo sapiens (human) Length = 1668 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gtggtcgaacagcgtgtcga 490 |||||||||||||||||||| Sbjct: 769 gtggtcgaacagcgtgtcga 750
>emb|CR622750.1| full-length cDNA clone CS0DA008YB13 of Neuroblastoma of Homo sapiens (human) Length = 1619 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gtggtcgaacagcgtgtcga 490 |||||||||||||||||||| Sbjct: 748 gtggtcgaacagcgtgtcga 729
>emb|CR622038.1| full-length cDNA clone CL0BB016ZA02 of Neuroblastoma of Homo sapiens (human) Length = 1394 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gtggtcgaacagcgtgtcga 490 |||||||||||||||||||| Sbjct: 796 gtggtcgaacagcgtgtcga 777
>emb|CR621262.1| full-length cDNA clone CS0DK011YK04 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1626 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gtggtcgaacagcgtgtcga 490 |||||||||||||||||||| Sbjct: 767 gtggtcgaacagcgtgtcga 748
>gb|AF368017.1|AF368017S1 Mus musculus betacellulin (Btc) gene, exon 1 Length = 2959 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 gaaggaaggagaggggagaa 57 |||||||||||||||||||| Sbjct: 479 gaaggaaggagaggggagaa 498
>emb|CR620643.1| full-length cDNA clone CS0DD009YH13 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1587 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gtggtcgaacagcgtgtcga 490 |||||||||||||||||||| Sbjct: 713 gtggtcgaacagcgtgtcga 694
>emb|CR620083.1| full-length cDNA clone CS0DI066YO15 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1627 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gtggtcgaacagcgtgtcga 490 |||||||||||||||||||| Sbjct: 791 gtggtcgaacagcgtgtcga 772
>emb|CR610431.1| full-length cDNA clone CS0DB009YB01 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1672 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gtggtcgaacagcgtgtcga 490 |||||||||||||||||||| Sbjct: 769 gtggtcgaacagcgtgtcga 750
>emb|CR606501.1| full-length cDNA clone CS0DI052YD11 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1357 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gtggtcgaacagcgtgtcga 490 |||||||||||||||||||| Sbjct: 796 gtggtcgaacagcgtgtcga 777
>emb|CR604955.1| full-length cDNA clone CS0DI071YO19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1591 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gtggtcgaacagcgtgtcga 490 |||||||||||||||||||| Sbjct: 734 gtggtcgaacagcgtgtcga 715
>emb|CR597010.1| full-length cDNA clone CS0DC029YE19 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1665 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gtggtcgaacagcgtgtcga 490 |||||||||||||||||||| Sbjct: 796 gtggtcgaacagcgtgtcga 777
>dbj|AB088423.1| Bombyx mori DNA, subtelomere region, clone:#10-48-65 Length = 2965 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 tgctgcccacgacggcgtcc 80 |||||||||||||||||||| Sbjct: 1912 tgctgcccacgacggcgtcc 1893
>gb|AC008743.9| Homo sapiens chromosome 19 clone CTD-2560K21, complete sequence Length = 192097 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 ccacactttgctggtttctt 434 |||||||||||||||||||| Sbjct: 92205 ccacactttgctggtttctt 92186
>gb|AC090649.4| Genomic sequence for Mus musculus, clone RP23-361O12, complete sequence Length = 211611 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gttttggcaaatggttcatc 192 |||||||||||||||||||| Sbjct: 66370 gttttggcaaatggttcatc 66389
>gb|AF303887.1|AF303887 Homo sapiens CLINT mRNA, complete cds Length = 1589 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gtggtcgaacagcgtgtcga 490 |||||||||||||||||||| Sbjct: 986 gtggtcgaacagcgtgtcga 967
>dbj|AK031740.1| Mus musculus 14 days embryo thymus cDNA, RIKEN full-length enriched library, clone:6130401I23 product:hypothetical Glutamine-rich region containing protein, full insert sequence Length = 1220 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ccgcccgctccgccccgccg 113 |||||||||||||||||||| Sbjct: 71 ccgcccgctccgccccgccg 90
>dbj|AK036995.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930034E13 product:A kinase (PRKA) anchor protein (yotiao) 9, full insert sequence Length = 3649 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ccgcccgctccgccccgccg 113 |||||||||||||||||||| Sbjct: 197 ccgcccgctccgccccgccg 216
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 gaaggaaggagaggggagaa 57 |||||||||||||||||||| Sbjct: 21228777 gaaggaaggagaggggagaa 21228758
>gb|AF237769.1|AF237769 Homo sapiens beta-parvin (PARVB) mRNA, complete cds Length = 1670 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gtggtcgaacagcgtgtcga 490 |||||||||||||||||||| Sbjct: 753 gtggtcgaacagcgtgtcga 734
>gb|AC025750.10| Homo sapiens BAC clone RP11-804P20 from 2, complete sequence Length = 151367 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ggagcagcagaaggaaggag 48 |||||||||||||||||||| Sbjct: 114398 ggagcagcagaaggaaggag 114417
>gb|AC158655.4| Mus musculus BAC RP23-406J21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 201519 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 agaaggaaggagaggggaga 56 |||||||||||||||||||| Sbjct: 99900 agaaggaaggagaggggaga 99881
>gb|AC079990.2| Rattus norvegicus strain Brown Norway chromosome 4 clone RP31-327J16, complete sequence Length = 116793 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ccgcccgctccgccccgccg 113 |||||||||||||||||||| Sbjct: 17751 ccgcccgctccgccccgccg 17732
>gb|AC027653.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-166J14, complete sequence Length = 174990 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ccgcccgctccgccccgccg 113 |||||||||||||||||||| Sbjct: 30589 ccgcccgctccgccccgccg 30570
>gb|AF256652.1|AF256652 Caiman crocodilus MHC class II beta chain (hcIIbeta) gene, complete cds Length = 6914 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 gaggagcagcagaaggaaggagag 50 |||||||||||| ||||||||||| Sbjct: 4867 gaggagcagcagcaggaaggagag 4890
>gb|AF256651.1|AF256651 Caiman crocodilus MHC class II beta chain (hcIIbeta) gene, complete cds Length = 9649 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 gaggagcagcagaaggaaggagag 50 |||||||||||| ||||||||||| Sbjct: 5873 gaggagcagcagcaggaaggagag 5896
>gb|AF151814.1|AF151814 Homo sapiens CGI-56 protein mRNA, complete cds Length = 1347 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gtggtcgaacagcgtgtcga 490 |||||||||||||||||||| Sbjct: 744 gtggtcgaacagcgtgtcga 725
>gb|BC039811.1| Homo sapiens, Similar to parvin, beta, clone IMAGE:5757378, mRNA Length = 1602 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gtggtcgaacagcgtgtcga 490 |||||||||||||||||||| Sbjct: 678 gtggtcgaacagcgtgtcga 659
>emb|AL159142.1|HS79B42 Novel human gene mapping to chomosome 22 Length = 1624 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gtggtcgaacagcgtgtcga 490 |||||||||||||||||||| Sbjct: 718 gtggtcgaacagcgtgtcga 699
>gb|AC174163.2| Gallus gallus BAC clone CH261-69O1 from chromosome ul, complete sequence Length = 178322 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 423 tgctggtttcttaccaattcttat 446 |||||| ||||||||||||||||| Sbjct: 109764 tgctggattcttaccaattcttat 109741
>gb|AY110012.1| Zea mays CL907_1 mRNA sequence Length = 2928 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 gctgcccacgacggcgtcca 81 |||||||||||||||||||| Sbjct: 453 gctgcccacgacggcgtcca 434
>gb|AC119259.15| Mus musculus chromosome 18, clone RP24-285N19, complete sequence Length = 169310 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 gcagcagaaggaaggagaggggag 55 |||||||||||||||||| ||||| Sbjct: 5347 gcagcagaaggaaggagaagggag 5370
>dbj|AB076253.1| Fusarium oxysporum Fopho5 gene, FoTri101 pseudogene, Foscs pseudogene, Foura7 gene, partial and complete cds Length = 8856 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 cgggatgatcctgcatttattgtc 284 ||||||||||||| |||||||||| Sbjct: 3756 cgggatgatcctgtatttattgtc 3733
>gb|AC064793.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-369O21, complete sequence Length = 196933 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ccgcccgctccgccccgccg 113 |||||||||||||||||||| Sbjct: 152710 ccgcccgctccgccccgccg 152691
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 ggccgcccgctccgccccgccgct 115 ||||||||||||||||| |||||| Sbjct: 2412836 ggccgcccgctccgcccagccgct 2412859
>gb|AF010496.1|AF010496 Rhodobacter capsulatus strain SB1003, partial genome Length = 189370 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 gggccgcccgctccgccccgccgc 114 ||||||||||| |||||||||||| Sbjct: 174997 gggccgcccgcgccgccccgccgc 175020
>gb|BC017461.1| Homo sapiens parvin, beta, transcript variant 2, mRNA (cDNA clone IMAGE:4859691) Length = 1406 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gtggtcgaacagcgtgtcga 490 |||||||||||||||||||| Sbjct: 791 gtggtcgaacagcgtgtcga 772
>emb|AL772171.7| Mouse DNA sequence from clone RP23-36B3 on chromosome 4, complete sequence Length = 209864 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 35 gcagaaggaaggagaggggagaacgatg 62 ||||||||| ||||||||||||| |||| Sbjct: 87462 gcagaaggagggagaggggagaaggatg 87435
>dbj|AB048276.1| Homo sapiens mRNA for affixin, complete cds Length = 1370 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gtggtcgaacagcgtgtcga 490 |||||||||||||||||||| Sbjct: 753 gtggtcgaacagcgtgtcga 734 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,115,734 Number of Sequences: 3902068 Number of extensions: 5115734 Number of successful extensions: 114079 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 88 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 113724 Number of HSP's gapped (non-prelim): 355 length of query: 528 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 505 effective length of database: 17,143,297,704 effective search space: 8657365340520 effective search space used: 8657365340520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)