ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags19p03 |
|---|---|
| Clone Library Name | barley_pub |
>RL31_PERFR (Q9M573) 60S ribosomal protein L31| Length = 121 Score = 150 bits (378), Expect(2) = 3e-39 Identities = 74/100 (74%), Positives = 79/100 (79%) Frame = +2 Query: 56 PRKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWS 235 PRK+EVV+REYT+NLHKRLHGCTFKKKAP AIKEIRKFAQKAMGT DVR+DVKLNKHIWS Sbjct: 8 PRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKHIWS 67 Query: 236 SGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVA*SPPG 355 GI ND+EDAKEELYSLVTVA P G Sbjct: 68 RGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPEG 107 Score = 31.6 bits (70), Expect(2) = 3e-39 Identities = 11/19 (57%), Positives = 18/19 (94%) Frame = +3 Query: 342 EVPQEGLKGLGTKVVEDED 398 E+P+ GLKGLGT+V+++E+ Sbjct: 103 EIPEGGLKGLGTQVIDEEE 121
>RL31_NICGU (P46290) 60S ribosomal protein L31| Length = 120 Score = 142 bits (359), Expect(2) = 1e-38 Identities = 74/107 (69%), Positives = 80/107 (74%) Frame = +2 Query: 29 MSEKKRAPGPRKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRID 208 MS+K + RK+EVVTREYT+NLHKRLH CTFKKKAP AIKEIRKFAQKAMGT DVR+D Sbjct: 1 MSDKTKG---RKEEVVTREYTINLHKRLHSCTFKKKAPTAIKEIRKFAQKAMGTKDVRVD 57 Query: 209 VKLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVA*SP 349 VKLNK IWS GI ND+EDAKEELYSLVTVA P Sbjct: 58 VKLNKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAEIP 104 Score = 37.0 bits (84), Expect(2) = 1e-38 Identities = 14/19 (73%), Positives = 18/19 (94%) Frame = +3 Query: 342 EVPQEGLKGLGTKVVEDED 398 E+P +GLKGLGTK++EDED Sbjct: 102 EIPAKGLKGLGTKIIEDED 120
>RL312_ARATH (P51420) 60S ribosomal protein L31-2| Length = 119 Score = 137 bits (345), Expect(2) = 1e-36 Identities = 71/107 (66%), Positives = 79/107 (73%) Frame = +2 Query: 29 MSEKKRAPGPRKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRID 208 MSEKK RK+EV+TREYT+NLH+RLH CTFKKKAP AIKEIRKFA+KAMGT DVR+D Sbjct: 1 MSEKKG----RKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD 56 Query: 209 VKLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVA*SP 349 VKLNK IWS GI ND+EDAKEE +SLVTVA P Sbjct: 57 VKLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIP 103 Score = 35.4 bits (80), Expect(2) = 1e-36 Identities = 14/19 (73%), Positives = 17/19 (89%) Frame = +3 Query: 342 EVPQEGLKGLGTKVVEDED 398 E+P EGL GLGTKV+E+ED Sbjct: 101 EIPAEGLSGLGTKVIEEED 119
>RL31_PICMA (O65071) 60S ribosomal protein L31| Length = 120 Score = 137 bits (345), Expect(2) = 2e-36 Identities = 66/98 (67%), Positives = 75/98 (76%) Frame = +2 Query: 59 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 238 R++EV TREYT+NLH+RLHGCTFKK AP A+KEIRKFAQKAMGT DVR+DVKLNK +WS Sbjct: 8 RRNEVATREYTINLHRRLHGCTFKKMAPKAVKEIRKFAQKAMGTTDVRLDVKLNKAVWSR 67 Query: 239 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVA*SPP 352 GI NDEEDAK+ELYS+VTVA PP Sbjct: 68 GIRSVPRRMRVRISRKRNDEEDAKDELYSIVTVAEVPP 105 Score = 35.0 bits (79), Expect(2) = 2e-36 Identities = 14/19 (73%), Positives = 17/19 (89%) Frame = +3 Query: 342 EVPQEGLKGLGTKVVEDED 398 EVP EGL GLGTK++E+ED Sbjct: 102 EVPPEGLTGLGTKIIEEED 120
>RL311_ARATH (Q9STR1) 60S ribosomal protein L31-1| Length = 119 Score = 136 bits (343), Expect(2) = 3e-36 Identities = 71/107 (66%), Positives = 78/107 (72%) Frame = +2 Query: 29 MSEKKRAPGPRKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRID 208 MSEKK RK+EVVTREYT+NLH+RLH CTFKKKAP AIKEIRKFA+K MGT DVR+D Sbjct: 1 MSEKKG----RKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVD 56 Query: 209 VKLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVA*SP 349 VKLNK IWS GI ND+EDAKEE +SLVTVA P Sbjct: 57 VKLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIP 103 Score = 35.0 bits (79), Expect(2) = 3e-36 Identities = 13/19 (68%), Positives = 17/19 (89%) Frame = +3 Query: 342 EVPQEGLKGLGTKVVEDED 398 E+P EGL GLGTK++E+ED Sbjct: 101 EIPAEGLSGLGTKIIEEED 119
>RL31_PANGI (Q9MAV7) 60S ribosomal protein L31| Length = 121 Score = 148 bits (373), Expect = 1e-35 Identities = 74/99 (74%), Positives = 78/99 (78%) Frame = +2 Query: 59 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 238 RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVR+DVKLNK IWS Sbjct: 8 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTKDVRVDVKLNKQIWSR 67 Query: 239 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVA*SPPG 355 GI ND+EDAKEELYSLVTVA P G Sbjct: 68 GIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAKIPAG 106
>RL31_CYAPA (Q9XGL4) 60S ribosomal protein L31| Length = 119 Score = 115 bits (289), Expect = 7e-26 Identities = 57/105 (54%), Positives = 71/105 (67%) Frame = +2 Query: 20 PSEMSEKKRAPGPRKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDV 199 P ++K RA E+VTREYT+NLHKRLHG FKK+AP A+KEI+KFA K MGT DV Sbjct: 2 PKAENKKSRAA-----EIVTREYTINLHKRLHGVGFKKRAPRAVKEIKKFASKIMGTTDV 56 Query: 200 RIDVKLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVT 334 R+D +LNK +W+ GI ND+EDAKE+LY+LVT Sbjct: 57 RVDPRLNKFVWNQGIRSVPYRVRVRLARKRNDDEDAKEKLYTLVT 101
>RL31_CHLRE (P45841) 60S ribosomal protein L31| Length = 116 Score = 114 bits (285), Expect = 2e-25 Identities = 57/94 (60%), Positives = 66/94 (70%) Frame = +2 Query: 59 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 238 R E VTREYT++L KRLH +FKK AP A+KEIRKFA K MGT+DVR+DVKLNK +WS Sbjct: 7 RSKEQVTREYTIHLSKRLHKTSFKKCAPKAVKEIRKFASKVMGTSDVRLDVKLNKAVWSK 66 Query: 239 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVA 340 GI ND+EDAKEE+YS VTVA Sbjct: 67 GIKNVPTRLRIVISRRRNDDEDAKEEMYSFVTVA 100
>RL31_SPOFR (Q7KF90) 60S ribosomal protein L31| Length = 124 Score = 111 bits (277), Expect = 2e-24 Identities = 53/90 (58%), Positives = 65/90 (72%) Frame = +2 Query: 65 DEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 244 +EVVTREYTVNLHKRLHG FKK+AP AIKEIRKFA+K MGT DVR+D +LNK +WS G+ Sbjct: 15 NEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVRVDTRLNKFLWSKGV 74 Query: 245 XXXXXXXXXXXXXXXNDEEDAKEELYSLVT 334 ND+ED+ +L++LVT Sbjct: 75 RNVPFRVRVRLSRRRNDDEDSAHKLFTLVT 104
>RL31_HELVI (Q9GP16) 60S ribosomal protein L31| Length = 124 Score = 111 bits (277), Expect = 2e-24 Identities = 53/90 (58%), Positives = 65/90 (72%) Frame = +2 Query: 65 DEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 244 +EVVTREYTVNLHKRLHG FKK+AP AIKEIRKFA+K MGT DVR+D +LNK +WS G+ Sbjct: 15 NEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVRVDTRLNKFLWSKGV 74 Query: 245 XXXXXXXXXXXXXXXNDEEDAKEELYSLVT 334 ND+ED+ +L++LVT Sbjct: 75 RNVPFRVRVRLSRRRNDDEDSAHKLFTLVT 104
>RL31_PAROL (Q9IA76) 60S ribosomal protein L31| Length = 124 Score = 110 bits (275), Expect = 3e-24 Identities = 55/105 (52%), Positives = 71/105 (67%) Frame = +2 Query: 20 PSEMSEKKRAPGPRKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDV 199 P++ EKK+ +EVVTREYT+N+HKR+HG FKK+AP AIKEIRKFA K MGT DV Sbjct: 3 PTKKGEKKKGRSAI-NEVVTREYTINVHKRIHGVGFKKRAPRAIKEIRKFAVKEMGTPDV 61 Query: 200 RIDVKLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVT 334 RID +LNK +WS G+ N++ED+ +LY+LVT Sbjct: 62 RIDTRLNKAVWSKGVRNVPYRIRVRLSRKRNEDEDSPNKLYTLVT 106
>RL31_RAT (P62902) 60S ribosomal protein L31| Length = 125 Score = 108 bits (271), Expect = 8e-24 Identities = 52/105 (49%), Positives = 70/105 (66%) Frame = +2 Query: 20 PSEMSEKKRAPGPRKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDV 199 P++ +K+ +EVVTREYT+N+HKR+HG FKK+AP A+KEIRKFA K MGT DV Sbjct: 3 PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDV 62 Query: 200 RIDVKLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVT 334 RID +LNK +W+ GI N++ED+ +LY+LVT Sbjct: 63 RIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVT 107
>RL31_PIG (P62901) 60S ribosomal protein L31| Length = 125 Score = 108 bits (271), Expect = 8e-24 Identities = 52/105 (49%), Positives = 70/105 (66%) Frame = +2 Query: 20 PSEMSEKKRAPGPRKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDV 199 P++ +K+ +EVVTREYT+N+HKR+HG FKK+AP A+KEIRKFA K MGT DV Sbjct: 3 PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDV 62 Query: 200 RIDVKLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVT 334 RID +LNK +W+ GI N++ED+ +LY+LVT Sbjct: 63 RIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVT 107
>RL31_MOUSE (P62900) 60S ribosomal protein L31| Length = 125 Score = 108 bits (271), Expect = 8e-24 Identities = 52/105 (49%), Positives = 70/105 (66%) Frame = +2 Query: 20 PSEMSEKKRAPGPRKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDV 199 P++ +K+ +EVVTREYT+N+HKR+HG FKK+AP A+KEIRKFA K MGT DV Sbjct: 3 PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDV 62 Query: 200 RIDVKLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVT 334 RID +LNK +W+ GI N++ED+ +LY+LVT Sbjct: 63 RIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVT 107
>RL31_ICTPU (Q90YT7) 60S ribosomal protein L31| Length = 125 Score = 108 bits (271), Expect = 8e-24 Identities = 52/105 (49%), Positives = 70/105 (66%) Frame = +2 Query: 20 PSEMSEKKRAPGPRKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDV 199 P + +K+ +EVVTREYT+N+HKR+HG +FKK+AP AIKEIRKFA K MGT DV Sbjct: 3 PLKKGGEKKKGRSAINEVVTREYTINVHKRIHGISFKKRAPRAIKEIRKFAMKEMGTPDV 62 Query: 200 RIDVKLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVT 334 RID +LNK +W+ G+ N++ED+ +LY+LVT Sbjct: 63 RIDTRLNKAVWAKGVRNVPYRMRVRLSRKRNEDEDSPNKLYTLVT 107
>RL31_HUMAN (P62899) 60S ribosomal protein L31| Length = 125 Score = 108 bits (271), Expect = 8e-24 Identities = 52/105 (49%), Positives = 70/105 (66%) Frame = +2 Query: 20 PSEMSEKKRAPGPRKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDV 199 P++ +K+ +EVVTREYT+N+HKR+HG FKK+AP A+KEIRKFA K MGT DV Sbjct: 3 PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDV 62 Query: 200 RIDVKLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVT 334 RID +LNK +W+ GI N++ED+ +LY+LVT Sbjct: 63 RIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVT 107
>RL31_XENLA (Q6NUH0) 60S ribosomal protein L31| Length = 125 Score = 105 bits (261), Expect = 1e-22 Identities = 51/105 (48%), Positives = 69/105 (65%) Frame = +2 Query: 20 PSEMSEKKRAPGPRKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDV 199 P++ +K+ +EVVTREYT+N+HKR+HG FKK+AP A+KEIRKFA K M T DV Sbjct: 3 PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGIGFKKRAPRALKEIRKFAVKEMRTPDV 62 Query: 200 RIDVKLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVT 334 RID +LNK +W+ GI N++ED+ +LY+LVT Sbjct: 63 RIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVT 107
>RL31_DROME (Q9V597) 60S ribosomal protein L31| Length = 124 Score = 103 bits (256), Expect = 5e-22 Identities = 50/90 (55%), Positives = 62/90 (68%) Frame = +2 Query: 65 DEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 244 +EVVTRE T++L KR+H FKK+AP AIKEIRKFA++ MGT DVRID +LNKHIWS GI Sbjct: 15 NEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVRIDTRLNKHIWSKGI 74 Query: 245 XXXXXXXXXXXXXXXNDEEDAKEELYSLVT 334 ND+ED+ +LY+ VT Sbjct: 75 RSTPFRIRVRLARRRNDDEDSPNKLYTYVT 104
>RL31_DROVI (O18602) 60S ribosomal protein L31| Length = 128 Score = 100 bits (250), Expect = 2e-21 Identities = 51/94 (54%), Positives = 63/94 (67%), Gaps = 4/94 (4%) Frame = +2 Query: 65 DEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 244 +EVVTRE T++L KR+H FKK+AP AIKEIRKF ++ MGTNDVRID +LNKHIWS GI Sbjct: 15 NEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFTEREMGTNDVRIDTRLNKHIWSKGI 74 Query: 245 XXXXXXX----XXXXXXXXNDEEDAKEELYSLVT 334 ND+ED+ +LY+LVT Sbjct: 75 SLRYRSTPFRVRVRLARRRNDDEDSPNKLYTLVT 108
>RL31_YEAST (P04649) 60S ribosomal protein L31 (L34) (YL28)| Length = 112 Score = 99.0 bits (245), Expect = 9e-21 Identities = 47/88 (53%), Positives = 61/88 (69%) Frame = +2 Query: 68 EVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGIX 247 +VVTREYT+NLHKRLHG +FKK+AP A+KEI+KFA+ MGT+DVR+ +LN+ IW G+ Sbjct: 5 DVVTREYTINLHKRLHGVSFKKRAPRAVKEIKKFAKLHMGTDDVRLAPELNQAIWKRGVK 64 Query: 248 XXXXXXXXXXXXXXNDEEDAKEELYSLV 331 N+EEDAK L+S V Sbjct: 65 GVEYRLRLRISRKRNEEEDAKNPLFSYV 92
>RL31_AEDAE (Q9GN74) 60S ribosomal protein L31| Length = 124 Score = 97.8 bits (242), Expect = 2e-20 Identities = 47/90 (52%), Positives = 62/90 (68%) Frame = +2 Query: 65 DEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 244 +EVVTRE T+NL++RLH +KK+AP A+K +RKFA+K MGTNDVRID +LNK +W GI Sbjct: 15 NEVVTRECTINLNRRLHKVGYKKRAPRAVKIVRKFAEKEMGTNDVRIDTRLNKALWHRGI 74 Query: 245 XXXXXXXXXXXXXXXNDEEDAKEELYSLVT 334 ND+ED+ +LY+LVT Sbjct: 75 RNPPFRIRVRLSRRRNDDEDSPNKLYTLVT 104
>RL31_CANGA (Q6FWF4) 60S ribosomal protein L31| Length = 113 Score = 97.1 bits (240), Expect = 3e-20 Identities = 45/88 (51%), Positives = 60/88 (68%) Frame = +2 Query: 68 EVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGIX 247 +VVTREYT+N+HKRLHG +FKK+AP A+KEI+KFA+ MGT DVR+ +LN+ IW G+ Sbjct: 6 DVVTREYTINMHKRLHGVSFKKRAPKAVKEIKKFAKLHMGTEDVRLAPELNQEIWKRGVK 65 Query: 248 XXXXXXXXXXXXXXNDEEDAKEELYSLV 331 N+EE+AK L+S V Sbjct: 66 GVAFRLRLRISRKRNEEENAKNPLFSYV 93
>RL31_ASHGO (Q757D7) 60S ribosomal protein L31| Length = 114 Score = 96.7 bits (239), Expect = 4e-20 Identities = 46/88 (52%), Positives = 58/88 (65%) Frame = +2 Query: 68 EVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGIX 247 +VVTREYT+NLHKRLHG TFKK+AP A+KEI+KFA+ MGT DVR+D +LN IW G+ Sbjct: 6 DVVTREYTINLHKRLHGVTFKKRAPRAVKEIKKFAKLHMGTEDVRLDPRLNTEIWKRGVK 65 Query: 248 XXXXXXXXXXXXXXNDEEDAKEELYSLV 331 N+E+ A L+S V Sbjct: 66 GVPFRMRLRISRRRNEEDTAPPPLFSYV 93
>RL31_CAEEL (Q9U332) 60S ribosomal protein L31| Length = 122 Score = 93.2 bits (230), Expect = 5e-19 Identities = 45/90 (50%), Positives = 60/90 (66%) Frame = +2 Query: 65 DEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 244 +EVVTREYT+++H R+ G KK+AP AI EI+KFA+ M TNDVR+D KLNK IWS GI Sbjct: 14 NEVVTREYTIHIHARIRGIGSKKRAPRAIDEIKKFAKIQMKTNDVRVDTKLNKFIWSKGI 73 Query: 245 XXXXXXXXXXXXXXXNDEEDAKEELYSLVT 334 N++ED+ ++LY+L T Sbjct: 74 KNVPYRVRVRLSRRRNEDEDSAQKLYTLCT 103
>RL31_SCHPO (Q9URX6) 60S ribosomal protein L31| Length = 113 Score = 84.3 bits (207), Expect = 2e-16 Identities = 42/89 (47%), Positives = 58/89 (65%) Frame = +2 Query: 65 DEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 244 ++VVTR+YT+++HKRL+G +FKK+AP AIKEI FAQK M T +VR+D LNK +W GI Sbjct: 10 NQVVTRDYTIHMHKRLYGVSFKKRAPRAIKEIVAFAQKHMQTKEVRVDPSLNKEVWKRGI 69 Query: 245 XXXXXXXXXXXXXXXNDEEDAKEELYSLV 331 +DE+D + LY+ V Sbjct: 70 RNVPHRLRLRLSRKRSDEDD--KALYTYV 96
>RL31_METJA (P54009) 50S ribosomal protein L31e| Length = 87 Score = 44.7 bits (104), Expect = 2e-04 Identities = 22/55 (40%), Positives = 34/55 (61%) Frame = +2 Query: 80 REYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 244 R YT+ L ++ K+AP AIK+I++F ++ M V+ID +LN+ IW GI Sbjct: 9 RIYTIPLRDVINKSVRTKRAPRAIKKIKQFLKRHMKAEIVKIDNELNEKIWERGI 63
>RL31_METKA (Q8TUY4) 50S ribosomal protein L31e| Length = 86 Score = 42.0 bits (97), Expect = 0.001 Identities = 22/55 (40%), Positives = 32/55 (58%) Frame = +2 Query: 80 REYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 244 R YTV L + KK+AP A+K +R+F ++ M +VRI +N+ IW GI Sbjct: 8 RVYTVPL-RDAKKAPLKKRAPRAVKALRQFIERHMKAEEVRIGNDVNEKIWERGI 61
>RL31_METMP (Q6M155) 50S ribosomal protein L31e| Length = 83 Score = 38.9 bits (89), Expect = 0.011 Identities = 18/55 (32%), Positives = 32/55 (58%) Frame = +2 Query: 80 REYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 244 R YT+ L + K+AP AI+ IR+F +K M ++ V++D +N+ +W + Sbjct: 5 RIYTIPLRDVTNKSPTTKRAPRAIRAIREFLKKHMKSDIVKLDNTINEKVWERSL 59
>RL31_PYRFU (Q8U3S7) 50S ribosomal protein L31e| Length = 95 Score = 37.4 bits (85), Expect = 0.031 Identities = 16/38 (42%), Positives = 24/38 (63%) Frame = +2 Query: 131 KKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 244 K+AP A+K +R+F + +V ID K+N+ IW GI Sbjct: 26 KRAPRAVKFVREFVARHAKAQEVIIDPKVNEKIWERGI 63
>RL31_METTH (O27649) 50S ribosomal protein L31e| Length = 81 Score = 37.0 bits (84), Expect = 0.041 Identities = 14/37 (37%), Positives = 24/37 (64%) Frame = +2 Query: 134 KAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 244 +AP A+K +R+F K M + V++D +N+ +W GI Sbjct: 20 RAPKAVKIVREFLMKHMKADTVKLDESINEKLWERGI 56
>RL31_PYRAB (Q9UYI7) 50S ribosomal protein L31e| Length = 94 Score = 35.8 bits (81), Expect = 0.091 Identities = 15/38 (39%), Positives = 23/38 (60%) Frame = +2 Query: 131 KKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 244 K+AP A+K +R+F + +V I K+N+ IW GI Sbjct: 26 KRAPRAVKFVREFVARHAKAQEVIISTKVNEKIWERGI 63
>RL31_PYRHO (P58189) 50S ribosomal protein L31e| Length = 95 Score = 35.4 bits (80), Expect = 0.12 Identities = 15/38 (39%), Positives = 23/38 (60%) Frame = +2 Query: 131 KKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSSGI 244 K+AP A+K +R+F + +V I K+N+ IW GI Sbjct: 27 KRAPRAVKFVREFIARHAKAQEVIISTKVNEKIWERGI 64
>RL31_AERPE (Q9YD25) 50S ribosomal protein L31e| Length = 105 Score = 34.3 bits (77), Expect = 0.26 Identities = 17/50 (34%), Positives = 32/50 (64%) Frame = +2 Query: 86 YTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWS 235 Y VNL +R++ ++A A++ +R+F ++ ++V ID +LN +IWS Sbjct: 10 YVVNL-RRVYWGRRTRRAIRAVRMVREFVRRHTKADEVVIDNELNNYIWS 58
>RL31_ARCFU (O28213) 50S ribosomal protein L31e| Length = 88 Score = 33.9 bits (76), Expect = 0.35 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Frame = +2 Query: 71 VVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTN--DVRIDVKLNKHIWSSG 241 VV R Y++ L ++ +A A K +RKF + M +V+ID +N+ IW G Sbjct: 5 VVERVYSIRLRHKMKRYPRWLRAKKAAKYVRKFLSRHMKVEPENVKIDTAVNEKIWERG 63
>PRPP_HUMAN (P81489) Salivary proline-rich protein II-1 (Fragment)| Length = 174 Score = 33.9 bits (76), Expect = 0.35 Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 6/68 (8%) Frame = +1 Query: 7 GRKEAVGDVGEEARPRPSQGRGGDPRVHRQPP------QAPPRMYLQEEGTKCHQGDQEV 168 GR G G+ RP P +GGD + HR PP + PP+ Q +G H G E Sbjct: 106 GRPPQQGGPGKPERPPP---QGGD-QSHRPPPPPGKPERPPPQGGDQSQGPPPHPGKPEG 161 Query: 169 CPEGHGNK 192 P GNK Sbjct: 162 PPPQEGNK 169
>RL31_METAC (Q8TIN3) 50S ribosomal protein L31e| Length = 89 Score = 32.3 bits (72), Expect = 1.0 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Frame = +2 Query: 65 DEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRI--DVKLNKHIWSS 238 D V + YT+ L + + K+A A+ E+R F + M T V++ D +N+H+W Sbjct: 4 DMVKEQIYTIPL-REVRKVPAWKRANRAVIEVRGFLVRHMKTESVQVKLDKSINEHLWEK 62 Query: 239 G 241 G Sbjct: 63 G 63
>NFM_HUMAN (P07197) Neurofilament triplet M protein (160 kDa neurofilament| protein) (Neurofilament medium polypeptide) (NF-M) (Neurofilament 3) Length = 915 Score = 32.0 bits (71), Expect = 1.3 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = +2 Query: 2 EQGERRPSEMSEKKRAPGPRKDEVVTREYTVNLHKRLH 115 E+ E +P ++ EKK+A P K+E V T+ ++H Sbjct: 718 EKKEEKPKDVPEKKKAESPVKEEAVAEVVTITKSVKVH 755
>RL31_METMA (Q8PYQ4) 50S ribosomal protein L31e| Length = 93 Score = 31.6 bits (70), Expect = 1.7 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%) Frame = +2 Query: 53 GPRKDEVVTRE-YTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT--NDVRIDVKLNK 223 G D++V + YT+ L + + K+A A+KE+R F + M T V++D +N+ Sbjct: 3 GKMADDMVKEQIYTIPL-REVRKVPAWKRAGRAVKEVRGFLVRHMKTEAEQVKLDKTINE 61 Query: 224 HIWSSG 241 +W G Sbjct: 62 CLWEKG 67
>FOXP4_HUMAN (Q8IVH2) Forkhead box protein P4 (Fork head-related protein-like A)| Length = 680 Score = 31.2 bits (69), Expect = 2.2 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = +1 Query: 28 DVGEEARPRPSQGRGGDPRVHRQPPQAPPRMYLQEEGTKCHQGDQEVCPEGHGN 189 DVG P PS G PR+ PPQ ++ ++EE + + Q P G N Sbjct: 607 DVGAPVEPLPSNGSSSPPRL--SPPQYSHQVQVKEEPAEAEEDRQPGPPLGAPN 658
>EMS_DROME (P18488) Homeotic protein empty spiracles| Length = 497 Score = 30.4 bits (67), Expect = 3.8 Identities = 24/74 (32%), Positives = 29/74 (39%), Gaps = 1/74 (1%) Frame = +1 Query: 55 PSQGRGGDPRVHRQPPQAPPRMYLQEEGTKCHQGDQEVCPEGHG-NK*CPHRR*AQQAHL 231 P G+ V PPQ PP G+ H + P HG PH + QQ HL Sbjct: 50 PQSPPPGERNVPGSPPQTPPATLTLIPGSPPH---HLMAPPAHGLPYPHPHAQQQQQQHL 106 Query: 232 EQRHQECPEESPCQ 273 + H P SP Q Sbjct: 107 QAPHPH-PHLSPAQ 119
>YBOX1_RAT (P62961) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB) Length = 321 Score = 30.0 bits (66), Expect = 5.0 Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 7/92 (7%) Frame = +1 Query: 34 GEEARP-RPSQGRGGDPRVHRQPP-QAPPRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHR 207 GE+ RP R + RG PR R PP Q PR EE K +QGD E G + P R Sbjct: 224 GEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEE-DKENQGD-----ETQGQQ-PPQR 276 Query: 208 R*AQQAHLEQRHQECP-----EESPCQDCPQE 288 R + + +R E P +E+ D P E Sbjct: 277 RYRRNFNYRRRRPENPKPQDGKETKAADPPAE 308
>YBOX1_MOUSE (P62960) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB) Length = 321 Score = 30.0 bits (66), Expect = 5.0 Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 7/92 (7%) Frame = +1 Query: 34 GEEARP-RPSQGRGGDPRVHRQPP-QAPPRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHR 207 GE+ RP R + RG PR R PP Q PR EE K +QGD E G + P R Sbjct: 224 GEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEE-DKENQGD-----ETQGQQ-PPQR 276 Query: 208 R*AQQAHLEQRHQECP-----EESPCQDCPQE 288 R + + +R E P +E+ D P E Sbjct: 277 RYRRNFNYRRRRPENPKPQDGKETKAADPPAE 308
>YBOX1_HUMAN (P67809) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB) Length = 323 Score = 30.0 bits (66), Expect = 5.0 Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 7/92 (7%) Frame = +1 Query: 34 GEEARP-RPSQGRGGDPRVHRQPP-QAPPRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHR 207 GE+ RP R + RG PR R PP Q PR EE K +QGD E G + P R Sbjct: 226 GEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEE-DKENQGD-----ETQGQQ-PPQR 278 Query: 208 R*AQQAHLEQRHQECP-----EESPCQDCPQE 288 R + + +R E P +E+ D P E Sbjct: 279 RYRRNFNYRRRRPENPKPQDGKETKAADPPAE 310
>YBOX1_BOVIN (P67808) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB) Length = 323 Score = 30.0 bits (66), Expect = 5.0 Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 7/92 (7%) Frame = +1 Query: 34 GEEARP-RPSQGRGGDPRVHRQPP-QAPPRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHR 207 GE+ RP R + RG PR R PP Q PR EE K +QGD E G + P R Sbjct: 226 GEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEE-DKENQGD-----ETQGQQ-PPQR 278 Query: 208 R*AQQAHLEQRHQECP-----EESPCQDCPQE 288 R + + +R E P +E+ D P E Sbjct: 279 RYRRNFNYRRRRPENPKPQDGKETKAADPPAE 310
>ZN592_MOUSE (Q8BHZ4) Zinc finger protein 592 (Zfp-592)| Length = 1262 Score = 29.6 bits (65), Expect = 6.5 Identities = 23/74 (31%), Positives = 34/74 (45%) Frame = +1 Query: 64 GRGGDPRVHRQPPQAPPRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRH 243 GR G P HR+ +A PRM + G C Q QE P+ R + +H+++ H Sbjct: 961 GRWGRPEAHRRA-EARPRM--RSTGWTC-QECQEWVPD----------RESYVSHMKKSH 1006 Query: 244 QECPEESPCQDCPQ 285 + PC+ C Q Sbjct: 1007 GRTLKRYPCRQCEQ 1020
>LOXL1_HUMAN (Q08397) Lysyl oxidase homolog 1 precursor (EC 1.4.3.-) (Lysyl| oxidase-like protein 1) (LOL) Length = 574 Score = 29.6 bits (65), Expect = 6.5 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = +1 Query: 7 GRKEAVGDVGEEARPRPSQGRGGDPRVHRQPPQA--PPRMY 123 G ++A D G EA +Q GGDPR+ PP A PP Y Sbjct: 285 GFEQAYPDPGPEA----AQAHGGDPRLGWYPPYANPPPEAY 321
>KCNN3_RAT (P70605) Small conductance calcium-activated potassium channel| protein 3 (SK3) Length = 732 Score = 29.6 bits (65), Expect = 6.5 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 1/89 (1%) Frame = +1 Query: 22 VGDVGEEAR-PRPSQGRGGDPRVHRQPPQAPPRMYLQEEGTKCHQGDQEVCPEGHGNK*C 198 VGD+ E+ + P PS G + PP APP + Q G ++ Sbjct: 12 VGDLDEDPKCPCPSSGDEQQQQQQPPPPSAPPAVPQQPPGPLLQPQPPQL---------- 61 Query: 199 PHRR*AQQAHLEQRHQECPEESPCQDCPQ 285 ++ QQ +Q+ Q+ +++P PQ Sbjct: 62 --QQQQQQQQQQQQQQQQQQQAPLHPLPQ 88
>Y3346_SHEON (Q8EBZ9) UPF0301 protein SO3346| Length = 187 Score = 29.6 bits (65), Expect = 6.5 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -2 Query: 411 DRGFSPHPPQPWYPNL*DLPGGLQATVTRE 322 DRGF H QP++ N +L GL T +R+ Sbjct: 81 DRGFVLHTSQPYWANSTELGSGLMLTTSRD 110
>PRB4M_HUMAN (P10161) Basic salivary proline-rich protein 4 allele M (Salivary| proline-rich protein Po) (Parotid o protein) [Contains: Peptide P-D] (Fragment) Length = 238 Score = 29.3 bits (64), Expect = 8.5 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 6/59 (10%) Frame = +1 Query: 34 GEEARPRPSQGRGGDPRVHRQPP------QAPPRMYLQEEGTKCHQGDQEVCPEGHGNK 192 G+ RP P G + HR PP + PP+ Q +G H G E P GNK Sbjct: 109 GKPERPPPQGGN----QSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNK 163
>APBA1_RAT (O35430) Amyloid beta A4 precursor protein-binding family A member| 1 (Neuron-specific X11 protein) (Neuronal Munc18-1-interacting protein 1) (Mint-1) (Adapter protein X11alpha) Length = 839 Score = 29.3 bits (64), Expect = 8.5 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 3/43 (6%) Frame = +1 Query: 28 DVGEEARPRPSQGRGGDP---RVHRQPPQAPPRMYLQEEGTKC 147 +V EE +P P G P R H PP PP +EE +C Sbjct: 33 EVEEEQQPSPPPPAGHAPEDHRAHPAPPPPPPPQEEEEERGEC 75
>PRB4S_HUMAN (P10163) Basic salivary proline-rich protein 4 allele S precursor| (Salivary proline-rich protein Po) (Parotid o protein) [Contains: Protein N1; Glycosylated protein A] Length = 247 Score = 29.3 bits (64), Expect = 8.5 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 6/59 (10%) Frame = +1 Query: 34 GEEARPRPSQGRGGDPRVHRQPP------QAPPRMYLQEEGTKCHQGDQEVCPEGHGNK 192 G+ RP P G + HR PP + PP+ Q +G H G E P GNK Sbjct: 118 GKPERPPPQGGN----QSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNK 172
>PRPH_MESAU (P06680) Acidic proline-rich protein HP43A precursor| Length = 183 Score = 29.3 bits (64), Expect = 8.5 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 4/84 (4%) Frame = +1 Query: 34 GEEARPRPSQ--GRGGDPRVHRQPPQAPPRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHR 207 G+ +PRP + + G P+ Q PP+ QE G +G Q+ P GN+ P + Sbjct: 75 GDHQKPRPPKPGNQQGPPQQEGQQQNRPPKPGNQE-GPPQQEGQQQNRPPKPGNQEGPPQ 133 Query: 208 R*AQQAHLEQR--HQECPEESPCQ 273 + QQ + + +QE P + Q Sbjct: 134 QEGQQQNRPPKPGNQEGPPQQEGQ 157
>PRB4L_HUMAN (P10162) Basic salivary proline-rich protein 4 allele L (Salivary| proline-rich protein Po) (Parotid o protein) [Contains: Peptide P-D] (Fragment) Length = 276 Score = 29.3 bits (64), Expect = 8.5 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 6/59 (10%) Frame = +1 Query: 34 GEEARPRPSQGRGGDPRVHRQPP------QAPPRMYLQEEGTKCHQGDQEVCPEGHGNK 192 G+ RP P G + HR PP + PP+ Q +G H G E P GNK Sbjct: 147 GKPERPPPQGGN----QSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNK 201
>YBOX1_CHICK (Q06066) Nuclease sensitive element-binding protein 1 (Y-box| binding protein 1) (Y-box transcription factor) Length = 321 Score = 29.3 bits (64), Expect = 8.5 Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 2/77 (2%) Frame = +1 Query: 34 GEEARP-RPSQGRGGDPRVHRQPP-QAPPRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHR 207 GE+ RP R + RG PR R PP Q PR EE K +QGD E G + P R Sbjct: 224 GEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEE-DKENQGD-----ETQGQQ-PPQR 276 Query: 208 R*AQQAHLEQRHQECPE 258 R + + +R E P+ Sbjct: 277 RYRRNFNYRRRRPENPK 293 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,647,752 Number of Sequences: 219361 Number of extensions: 1399589 Number of successful extensions: 4583 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 4218 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4557 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
