>YG1T_YEAST (P53227) Hypothetical 31.0 kDa protein in BUD9-RME1 intergenic|
           region
          Length = 271

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = -3

Query: 227 YPSCLSTGKQSPVITNN--PISGIGRTREAHSNLDL-QKSRPSGEFGCTK 87
           YPS LS  KQ P+I++N   ++ I   RE HSN+ +   +R   E   TK
Sbjct: 104 YPSNLSVQKQRPLISDNAPSLNHISTAREVHSNIKVTTPNRKQTEDNATK 153

>ASB8_MOUSE (Q91ZT9) Ankyrin repeat and SOCS box protein 8 (ASB-8)|
          Length = 288

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
 Frame = -2

Query: 459 SSKVWHVATSVQNRYSPVPSVYRTLYLLSCNSVPLPNYNRLILG----RCSHG 313
           SS +W++  S+Q++YS    + RT  + +  S P  N   LI G     C+HG
Sbjct: 2   SSSMWYIMQSIQSKYSLSERLIRT--IAAIRSFPHDNVEDLIRGGADVNCTHG 52

>ASB8_HUMAN (Q9H765) Ankyrin repeat and SOCS box protein 8 (ASB-8)|
          Length = 288

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
 Frame = -2

Query: 459 SSKVWHVATSVQNRYSPVPSVYRTLYLLSCNSVPLPNYNRLILG----RCSHG 313
           SS +W++  S+Q++YS    + RT  + +  S P  N   LI G     C+HG
Sbjct: 2   SSSMWYIMQSIQSKYSLSERLIRT--IAAIRSFPHDNVEDLIRGGADVNCTHG 52

>HISZ_AGRT5 (Q8UHK2) ATP phosphoribosyltransferase regulatory subunit|
          Length = 375

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 39/151 (25%), Positives = 60/151 (39%), Gaps = 23/151 (15%)
 Frame = +1

Query: 55  AVDMTLKSTKALVQPNSPDGLDFWRSKLLWASRVLPMPLIGLFV-ITGLCLPVDK----- 216
           A+ + L   K LVQ       D  +   L  S V P P+ GL   + GL    D+     
Sbjct: 154 ALGLPLGWQKRLVQAFG----DMAQLDALLESLVHPKPMTGLDARVAGLLATGDEAVLVD 209

Query: 217 -------QDGYPELKALSKLDLGAALKIFLAK----------QLTSDFTAMTAPAEDKSV 345
                  + GY    + S L++   L+  LA           +L   F A+ AP    S 
Sbjct: 210 YLDTVMQETGYSTNASRSPLEIARRLREKLALAATRLPDESFELLKQFLALQAPLPQASQ 269

Query: 346 IIGERNRVATEKIKGAINRGYRRIAVLYGGG 438
           ++G+    A  K+ GA++   +R+A L   G
Sbjct: 270 VLGDFAARAKLKLDGALSAFDKRVAALANAG 300

>MIAA_RICCN (Q92HW4) tRNA delta(2)-isopentenylpyrophosphate transferase (EC|
           2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA
           isopentenyltransferase) (IPTase) (IPPT)
          Length = 326

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
 Frame = +1

Query: 304 DFTAMTAPAEDKSVIIGERNRVATEKIKGAINRGYRRIAV----------LYGGGHMPDL 453
           +F +MT   ED SVI  +  ++ATEKIK   +RG   I +          ++G  ++PD+
Sbjct: 82  NFLSMT---EDFSVI--KYLKLATEKIKEITDRGKLPILIGGTGLYINSLVFGYNNIPDI 136

Query: 454 GRRLREELNMVPSNVQWVTAWS 519
              L+E++  +   +  +  WS
Sbjct: 137 SEDLQEQVRNLHVKIGNIELWS 158

>DMC1_MOUSE (Q61880) Meiotic recombination protein DMC1/LIM15 homolog|
          Length = 340

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
 Frame = +1

Query: 235 LKALSKLDLGAALKIFLAKQLTSDFTA-MTAPAEDKSVIIGE-RNRVATEKIKGAINRGY 408
           L  L K+     + +F+  Q+T+D  A MT  A+ K  I G      +T +I     RG 
Sbjct: 250 LSRLQKISEEYNVAVFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTRISLRKGRGE 309

Query: 409 RRIAVLYGGGHMPD 450
            RIA +Y    MP+
Sbjct: 310 LRIAKIYDSPEMPE 323

>DMC1_HUMAN (Q14565) Meiotic recombination protein DMC1/LIM15 homolog|
          Length = 340

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
 Frame = +1

Query: 235 LKALSKLDLGAALKIFLAKQLTSDFTA-MTAPAEDKSVIIGE-RNRVATEKIKGAINRGY 408
           L  L K+     + +F+  Q+T+D  A MT  A+ K  I G      +T +I     RG 
Sbjct: 250 LSRLQKISEEYNVAVFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTRISLRKGRGE 309

Query: 409 RRIAVLYGGGHMPD 450
            RIA +Y    MP+
Sbjct: 310 LRIAKIYDSPEMPE 323

>ATCU_RHILV (Q9X5V3) Copper-transporting P-type ATPase (EC 3.6.3.4)|
          Length = 841

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
 Frame = +1

Query: 103 SPDGLDFWRSKLLWASRVLPMPLIGLFVITGLCLPVDKQDGYP-----ELKALSKLDLGA 267
           +P+ +DF R   LW S +L +PL+ L +   L LP+ +  G P     EL   + + L A
Sbjct: 176 NPELVDFVRR--LWVSAILALPLLALGMGPMLGLPLREAIGEPQATFIELLLATPVVLWA 233

Query: 268 ALKIF 282
           AL  F
Sbjct: 234 ALPFF 238

>DDLB_CHRVO (Q7NQ01) D-alanine--D-alanine ligase B (EC 6.3.2.4)|
           (D-alanylalanine synthetase B) (D-Ala-D-Ala ligase B)
          Length = 303

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +1

Query: 115 LDFWRSKLLWASRVLPMPLIGLFVITGLCLPVDKQDGYP 231
           +D WR+KLLW    LP+P   L         +++Q G P
Sbjct: 97  MDKWRTKLLWKGAGLPIPAFELLDENSDFDAIERQLGLP 135

>Y114_MYCPN (P75448) Putative acetyltransferase MPN114 (EC 2.3.1.-)|
           (C09_orf600)
          Length = 600

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2

Query: 495 IGWDHIQLFSKTSSKVWHVATSVQNRYSPVPSVYRTLYLL 376
           +GW   +L +  S+++WH+   VQ R     SV   L+ L
Sbjct: 126 VGWSQAELAAALSAQLWHIYQQVQKRQLTSFSVKDKLFSL 165

>Y4TE_RHISN (P55659) Probable amino-acid ABC transporter periplasmic-binding|
           protein y4tE precursor
          Length = 300

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 24/83 (28%), Positives = 36/83 (43%)
 Frame = +1

Query: 259 LGAALKIFLAKQLTSDFTAMTAPAEDKSVIIGERNRVATEKIKGAINRGYRRIAVLYGGG 438
           + AAL +FL+ QL    T     A     I      +A E + G+       +      G
Sbjct: 25  VAAALSLFLSAQLAGAVTLEEVKARGYITIA-----IANE-MPGSYTDPNGEVK-----G 73

Query: 439 HMPDLGRRLREELNMVPSNVQWV 507
              D+ RR+ E+L + P N+QWV
Sbjct: 74  SEADVARRVLEKLGIKPENIQWV 96

>EGR1_COTJA (O73692) Early growth response protein 1 (EGR-1) (Zinc finger|
           protein ZENK) (Fragment)
          Length = 194

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
 Frame = -3

Query: 512 AVTHCTLDGTIFSSSRRRLPRSGMWPPPYRTAI------LLYPRFIAPFIFSVATLFLSP 351
           A T+ +   T++SS     P S  +P P  TA         YP   A F   VAT F SP
Sbjct: 111 ATTYPSPVRTVYSS-----PASSSYPSPAHTAFPSPSIATTYPSGTATFQTQVATSFPSP 165

Query: 350 IITDLSSAGAVMAV 309
            +T+  S+    A+
Sbjct: 166 AVTNNFSSQVTSAL 179


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,487,011
Number of Sequences: 219361
Number of extensions: 1745080
Number of successful extensions: 4862
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4858
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4757699440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)