>gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055D24
              map C535, complete sequence
          Length = 174759

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                   
Query: 489    aaccccatgcacctccatggccaggacatgttcgtcctcgcgcaggggctcgg 541
              ||||| ||||||||||||||| | ||| ||||||| |||||||| ||||||||
Sbjct: 167411 aacccgatgcacctccatggctatgacgtgttcgtgctcgcgcaagggctcgg 167463



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 442    cggtggagatcgtgttccagagc 464
              |||||||||||||||||||||||
Sbjct: 167364 cggtggagatcgtgttccagagc 167386

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                    
Query: 489     aaccccatgcacctccatggccaggacatgttcgtcctcgcgcaggggctcgg 541
               ||||| ||||||||||||||| | ||| ||||||| |||||||| ||||||||
Sbjct: 8850816 aacccgatgcacctccatggctatgacgtgttcgtgctcgcgcaagggctcgg 8850764



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 489      aaccccatgcacctccatggccaggacatgttcgtcctcgcgcaggggct 538
                ||||||||||||||||||||| | ||| | ||| |||| |||||||||||
Sbjct: 24578346 aaccccatgcacctccatggctatgacgtcttcctccttgcgcaggggct 24578395



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 442     cggtggagatcgtgttccagagc 464
               |||||||||||||||||||||||
Sbjct: 8850863 cggtggagatcgtgttccagagc 8850841



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 489      aaccccatgcacctccatggc 509
                |||||||||||||||||||||
Sbjct: 24569654 aaccccatgcacctccatggc 24569674

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                    
Query: 489     aaccccatgcacctccatggccaggacatgttcgtcctcgcgcaggggctcgg 541
               ||||| ||||||||||||||| | ||| ||||||| |||||||| ||||||||
Sbjct: 8922479 aacccgatgcacctccatggctatgacgtgttcgtgctcgcgcaagggctcgg 8922427



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 489      aaccccatgcacctccatggccaggacatgttcgtcctcgcgcaggggct 538
                ||||||||||||||||||||| | ||| | ||| |||| |||||||||||
Sbjct: 24890016 aaccccatgcacctccatggctatgacgtcttcctccttgcgcaggggct 24890065



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 442     cggtggagatcgtgttccagagc 464
               |||||||||||||||||||||||
Sbjct: 8922526 cggtggagatcgtgttccagagc 8922504



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                     
Query: 489      aaccccatgcacctccatggccaggacatgttcgtcctcgcgcaggggctcgg 541
                ||||||||||||||||||||| | ||  | ||| |||| || |||||||||||
Sbjct: 24881324 aaccccatgcacctccatggctatgatgtcttcctccttgcacaggggctcgg 24881376

>gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0041L19, complete sequence
          Length = 155086

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 489   aaccccatgcacctccatggccaggacatgttcgtcctcgcgcaggggct 538
             ||||||||||||||||||||| | ||| | ||| |||| |||||||||||
Sbjct: 55248 aaccccatgcacctccatggctatgacgtcttcctccttgcgcaggggct 55297



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                  
Query: 489   aaccccatgcacctccatggccaggacatgttcgtcctcgcgcaggggctcgg 541
             ||||||||||||||||||||| | ||  | ||| |||| || |||||||||||
Sbjct: 46556 aaccccatgcacctccatggctatgatgtcttcctccttgcacaggggctcgg 46608

>dbj|AK066963.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093P21, full
            insert sequence
          Length = 2095

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                              
Query: 489  aaccccatgcacctccatggccaggacatgttcgtcctcgcgcaggggct 538
            ||||||||||||||||||||| | ||| | ||| |||| |||||||||||
Sbjct: 1503 aaccccatgcacctccatggctatgacgtcttcctccttgcgcaggggct 1552

>gb|AF465469.1| Lolium perenne laccase LAC2-1 mRNA, complete cds
          Length = 2056

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                     
Query: 495  atgcacctccatggccaggacatgttcgtcctcgcgcaggg 535
            ||||||||||||||||| ||| | ||||||||||| |||||
Sbjct: 1443 atgcacctccatggccacgacttcttcgtcctcgcccaggg 1483

>ref|NM_101674.3| Arabidopsis thaliana copper ion binding AT1G18140 mRNA, complete cds
          Length = 1931

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 572  gtacaacctggtggatccgccggtgaggaa 601
            ||||||| ||||||||||||||| ||||||
Sbjct: 1570 gtacaacttggtggatccgccggagaggaa 1599

>gb|AF465470.1| Lolium perenne laccase LAC5-4 mRNA, complete cds
          Length = 2156

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 441  acggtggagatcgtgttccagagcccggtg 470
            ||||||||||||||| |||||| |||||||
Sbjct: 1381 acggtggagatcgtgctccagaacccggtg 1410

>gb|AC034107.5|T10F20 Sequence of BAC T10F20 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 81129

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 572   gtacaacctggtggatccgccggtgaggaa 601
             ||||||| ||||||||||||||| ||||||
Sbjct: 45283 gtacaacttggtggatccgccggagaggaa 45254

>gb|AC069551.4|AC069551 Genomic sequence for Arabidopsis thaliana BAC T10O22 from chromosome I,
             complete sequence
          Length = 92948

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 572   gtacaacctggtggatccgccggtgaggaa 601
             ||||||| ||||||||||||||| ||||||
Sbjct: 30587 gtacaacttggtggatccgccggagaggaa 30558

>ref|NM_192960.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1689

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                 
Query: 572  gtacaacctggtggatccgccggtgaggaacaccgtc 608
            ||||||||| || || ||||||| |||||||||||||
Sbjct: 1470 gtacaacctcgtcgacccgccggagaggaacaccgtc 1506

>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 588     ccgccggtgaggaacaccgtc 608
               |||||||||||||||||||||
Sbjct: 1591830 ccgccggtgaggaacaccgtc 1591850

>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 588     ccgccggtgaggaacaccgtc 608
               |||||||||||||||||||||
Sbjct: 1974386 ccgccggtgaggaacaccgtc 1974406

>gb|AE011767.1| Xanthomonas axonopodis pv. citri str. 306,  section 145 of 469 of the
            complete genome
          Length = 11162

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 588  ccgccggtgaggaacaccgtc 608
            |||||||||||||||||||||
Sbjct: 4000 ccgccggtgaggaacaccgtc 4020

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 572      gtacaacctggtggatccgccggtgaggaacaccgtc 608
                ||||||||| || || ||||||| |||||||||||||
Sbjct: 25435522 gtacaacctcgtcgacccgccggagaggaacaccgtc 25435486

>dbj|AP004317.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0663E10
          Length = 162297

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                   
Query: 572    gtacaacctggtggatccgccggtgaggaacaccgtc 608
              ||||||||| || || ||||||| |||||||||||||
Sbjct: 125522 gtacaacctcgtcgacccgccggagaggaacaccgtc 125486

>dbj|AK103094.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118K21, full
            insert sequence
          Length = 2065

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 489  aaccccatgcacctccatggc 509
            |||||||||||||||||||||
Sbjct: 1529 aaccccatgcacctccatggc 1549

>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 588     ccgccggtgaggaacaccgtc 608
               |||||||||||||||||||||
Sbjct: 1996433 ccgccggtgaggaacaccgtc 1996453

>gb|AY364319.1| Felis catus chromosome A2 endogenous virus endogenous feline leukemia
            virus enFeLV-GGAG, complete sequence
          Length = 9867

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 486  gctaaccccatgcacctccatggc 509
            |||||||||||||| |||||||||
Sbjct: 7931 gctaaccccatgcatctccatggc 7954

>gb|AY364318.1| Felis catus chromosome A1 endogenous virus endogenous feline leukemia
            virus enFeLV-AGTT, complete sequence
          Length = 9895

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 486  gctaaccccatgcacctccatggc 509
            |||||||||||||| |||||||||
Sbjct: 7944 gctaaccccatgcatctccatggc 7967

>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 565     tcgcgacgtacaacctggtg 584
               ||||||||||||||||||||
Sbjct: 1635801 tcgcgacgtacaacctggtg 1635820

>ref|XM_863193.1| PREDICTED: Canis familiaris hypothetical protein LOC611444
           (LOC611444), mRNA
          Length = 690

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 524 cctcgcgcaggggctcgggc 543
           ||||||||||||||||||||
Sbjct: 386 cctcgcgcaggggctcgggc 405

>gb|DQ118863.1| Streptomyces fradiae strain NRRL18158 lipopeptide antibiotic A54145
             biosynthetic gene cluster, complete sequence
          Length = 126933

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 148   tgcgcccggtgccggccaacgtcc 171
             ||||||||||||| ||||||||||
Sbjct: 84746 tgcgcccggtgcccgccaacgtcc 84769

>gb|AC151314.2| Xenopus tropicalis clone ISB-195A7, complete sequence
          Length = 108847

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   tttgggacccatgattaata 261
             ||||||||||||||||||||
Sbjct: 98197 tttgggacccatgattaata 98178

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 424      ggctgcggtacaatgccacggtgg 447
                ||||| ||||||||||||||||||
Sbjct: 16376890 ggctgtggtacaatgccacggtgg 16376913

>gb|AC008313.3|AC008313 Drosophila melanogaster, chromosome 3R, region 84D-84E, BAC clone
             BACR11D12, complete sequence
          Length = 189596

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 317   taacatgagcagcattagca 336
             ||||||||||||||||||||
Sbjct: 63289 taacatgagcagcattagca 63308

>gb|AE003676.4| Drosophila melanogaster chromosome 3R, section 14 of 118 of the complete
              sequence
          Length = 267607

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 317    taacatgagcagcattagca 336
              ||||||||||||||||||||
Sbjct: 139828 taacatgagcagcattagca 139847

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 424      ggctgcggtacaatgccacggtgg 447
                ||||| ||||||||||||||||||
Sbjct: 16330123 ggctgtggtacaatgccacggtgg 16330146

>emb|AL713907.3|CNS07YQ7 Oryza sativa chromosome 12, . BAC OJ1057_E03 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 127989

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 424   ggctgcggtacaatgccacggtgg 447
             ||||| ||||||||||||||||||
Sbjct: 75501 ggctgtggtacaatgccacggtgg 75478

>gb|AC130712.4| Mus musculus BAC clone RP23-125B4 from 1, complete sequence
          Length = 186518

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 208    tctgtccacatggcgaatcatcct 231
              ||||||||||||| ||||||||||
Sbjct: 110719 tctgtccacatggtgaatcatcct 110696

>gb|L25632.1|FCVFELVAC Feline Leukemia Virus DNA sequence
          Length = 2378

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 486  gctaaccccatgcacctccatggc 509
            |||||||||||||| |||||||||
Sbjct: 1258 gctaaccccatgcatctccatggc 1281

>gb|M25425.1|CATFLVEP Cat endogenous proviral feline leukemia virus envelope protein gene,
            complete cds
          Length = 2615

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 486  gctaaccccatgcacctccatggc 509
            |||||||||||||| |||||||||
Sbjct: 1318 gctaaccccatgcatctccatggc 1341


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,780,735
Number of Sequences: 3902068
Number of extensions: 3780735
Number of successful extensions: 61974
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61600
Number of HSP's gapped (non-prelim): 372
length of query: 610
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 587
effective length of database: 17,143,297,704
effective search space: 10063115752248
effective search space used: 10063115752248
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)