ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags19n14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 432 e-118
2gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 432 e-118
3emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa... 432 e-118
4emb|BX000493.1|CNS08CDJ Oryza sativa chromosome 11, . BAC OSJNBb... 432 e-118
5dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 408 e-111
6dbj|AK103426.1| Oryza sativa (japonica cultivar-group) cDNA clon... 408 e-111
7gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 408 e-111
8emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa... 408 e-111
9emb|CT010504.7| M.truncatula DNA sequence from clone MTH2-28A3 o... 48 0.033
10ref|XM_470148.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.51
11gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.51
12dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.51
13gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic ... 44 0.51
14gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genom... 44 0.51
15dbj|AK102999.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.51
16gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence 42 2.0
17gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence 42 2.0
18gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.0
19gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.0
20gb|AC171267.17| Medicago truncatula clone mth2-17i7, complete se... 40 8.0
21gb|AC072048.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 8.0
22gb|BT011037.1| Drosophila melanogaster RE42582 full insert cDNA 40 8.0
23gb|AC121895.3| Mus musculus BAC clone RP24-157P5 from chromosome... 40 8.0
24gb|AC122059.1| Mus musculus BAC clone RP24-468J3 from 1, complet... 40 8.0
25gb|AY307975.1| Drosophila mauritiana cytochrome c oxidase polype... 40 8.0
26gb|AY307961.1| Drosophila simulans from Kenya cytochrome c oxida... 40 8.0
27gb|AY307960.1| Drosophila simulans from Seychelles cytochrome c ... 40 8.0
28gb|AC146852.15| Medicago truncatula clone mth2-58k21, complete s... 40 8.0
29gb|AC135320.6| Medicago truncatula clone mth2-28e9, complete seq... 40 8.0
30emb|AL583888.9| Human DNA sequence from clone RP11-132E18 on chr... 40 8.0
31emb|CR380956.1| Candida glabrata strain CBS138 chromosome J comp... 40 8.0
32emb|AL161554.2|ATCHRIV54 Arabidopsis thaliana DNA chromosome 4, ... 40 8.0
33emb|AL080282.1|ATT13K14 Arabidopsis thaliana DNA chromosome 4, B... 40 8.0
34emb|AL021960.2|ATF7J7 Arabidopsis thaliana DNA chromosome 4, BAC... 40 8.0
35emb|BX842687.13| Zebrafish DNA sequence from clone DKEY-97L11 in... 40 8.0
36ref|NM_169436.1| Drosophila melanogaster Cytochrome c oxidase su... 40 8.0
37ref|NM_057869.3| Drosophila melanogaster Cytochrome c oxidase su... 40 8.0
38dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
39emb|BX826462.1|CNS0A4C1 Arabidopsis thaliana Full-length cDNA Co... 40 8.0
40emb|BX827021.1|CNS0A3CK Arabidopsis thaliana Full-length cDNA Co... 40 8.0
41emb|BX826365.1|CNS0A35W Arabidopsis thaliana Full-length cDNA Co... 40 8.0
42gb|AC008307.7|AC008307 Drosophila melanogaster, chromosome 3R, r... 40 8.0
43gb|AC153909.5| Mus musculus 6 BAC RP23-190O15 (Roswell Park Canc... 40 8.0
44emb|BX004818.16| Zebrafish DNA sequence from clone DKEY-64O12, c... 40 8.0
45dbj|AK108071.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.0
46gb|AE003693.3| Drosophila melanogaster chromosome 3R, section 31... 40 8.0
47emb|AL929440.5| Mouse DNA sequence from clone RP23-292F11 on chr... 40 8.0
48gb|AC116954.4| Mus musculus BAC clone RP23-387L22 from 1, comple... 40 8.0 
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score =  432 bits (218), Expect = e-118
 Identities = 461/542 (85%)
 Strand = Plus / Minus

                                                                          
Query: 33     acattgttgtttggaacgcgatgatcttggggctgggcctgactgggcatggtaggattg 92
              ||||| |||||||||| || |||||||||||||| ||| ||||||| ||||  | |||||
Sbjct: 445916 acattattgtttggaatgccatgatcttggggcttggcatgactggccatgaaaagattg 445857

                                                                          
Query: 93     gatttgcccttgtcggcaagatggagaagtcaggcatgaaactgaatgacaacactttca 152
               |||||||||||| ||  ||||||||||||| ||| ||||| |||||||||| |||||||
Sbjct: 445856 catttgcccttgttggtcagatggagaagtctggcgtgaaattgaatgacaatactttca 445797

                                                                          
Query: 153    tcagcattctctgcagctgtacccataccggccttgtaaaagatggacggcggtatttcc 212
              |  || | |||||||||||||| || || |||||  |  ||||||| || ||||||||||
Sbjct: 445796 ttggcttgctctgcagctgtacacacactggcctcattcaagatgggcgacggtatttcc 445737

                                                                          
Query: 213    ataacatgactcagttatacaacatcacgcctaggattgagcactatggttgtatggtcg 272
              ||||||||||| |||||||| ||||||  |||||||||||||| || |||||||||||||
Sbjct: 445736 ataacatgactaagttataccacatcagccctaggattgagcattacggttgtatggtcg 445677

                                                                          
Query: 273    acctgctcagtcgcgctgggttgctccaggaagcccatcagcttattgatgatatgccaa 332
              | ||||||||||||||||||||| | ||||| || ||||| ||| ||||||| |||||||
Sbjct: 445676 atctgctcagtcgcgctgggttgttgcaggaggctcatcaacttgttgatgacatgccaa 445617

                                                                          
Query: 333    tgcaggcaaacgctgtcgtgtggggagcacttcttggtggctgcaagattcaccgagacg 392
              |||  ||||| |||||  | | ||| |||||||||||||||||||||||||||||| || 
Sbjct: 445616 tgccagcaaatgctgttatattgggtgcacttcttggtggctgcaagattcaccgaaaca 445557

                                                                          
Query: 393    ctgagcttgcagaacatgtcttgaagcagctcatcctgctagagccccggaattccggaa 452
              | |||||||| |||||||| |||||||||||||| || || |||||| ||||||| || |
Sbjct: 445556 cggagcttgctgaacatgttttgaagcagctcattctactggagccctggaattctggga 445497

                                                                          
Query: 453    attatgtcatgctctcaaacatatactctaacagcaacagatgggaggatgctgcgaagc 512
              | ||||| |||||||| |||||||||||||||||   ||||||||||||||| |||||||
Sbjct: 445496 actatgtaatgctctccaacatatactctaacagaggcagatgggaggatgcagcgaagc 445437

                                                                          
Query: 513    ttagatcggacatgaaggtgaaaggggttgagaaagcccgtgcatatagctgggttgagt 572
              |||||| ||||||||| |  |||||||| ||||| |  | |||||  |||||||||||||
Sbjct: 445436 ttagattggacatgaaagcaaaaggggtcgagaaggttcctgcatgcagctgggttgagt 445377

                
Query: 573    tt 574
              ||
Sbjct: 445376 tt 445375
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  432 bits (218), Expect = e-118
 Identities = 461/542 (85%)
 Strand = Plus / Minus

                                                                          
Query: 33     acattgttgtttggaacgcgatgatcttggggctgggcctgactgggcatggtaggattg 92
              ||||| |||||||||| || |||||||||||||| ||| ||||||| ||||  | |||||
Sbjct: 445916 acattattgtttggaatgccatgatcttggggcttggcatgactggccatgaaaagattg 445857

                                                                          
Query: 93     gatttgcccttgtcggcaagatggagaagtcaggcatgaaactgaatgacaacactttca 152
               |||||||||||| ||  ||||||||||||| ||| ||||| |||||||||| |||||||
Sbjct: 445856 catttgcccttgttggtcagatggagaagtctggcgtgaaattgaatgacaatactttca 445797

                                                                          
Query: 153    tcagcattctctgcagctgtacccataccggccttgtaaaagatggacggcggtatttcc 212
              |  || | |||||||||||||| || || |||||  |  ||||||| || ||||||||||
Sbjct: 445796 ttggcttgctctgcagctgtacacacactggcctcattcaagatgggcgacggtatttcc 445737

                                                                          
Query: 213    ataacatgactcagttatacaacatcacgcctaggattgagcactatggttgtatggtcg 272
              ||||||||||| |||||||| ||||||  |||||||||||||| || |||||||||||||
Sbjct: 445736 ataacatgactaagttataccacatcagccctaggattgagcattacggttgtatggtcg 445677

                                                                          
Query: 273    acctgctcagtcgcgctgggttgctccaggaagcccatcagcttattgatgatatgccaa 332
              | ||||||||||||||||||||| | ||||| || ||||| ||| ||||||| |||||||
Sbjct: 445676 atctgctcagtcgcgctgggttgttgcaggaggctcatcaacttgttgatgacatgccaa 445617

                                                                          
Query: 333    tgcaggcaaacgctgtcgtgtggggagcacttcttggtggctgcaagattcaccgagacg 392
              |||  ||||| |||||  | | ||| |||||||||||||||||||||||||||||| || 
Sbjct: 445616 tgccagcaaatgctgttatattgggtgcacttcttggtggctgcaagattcaccgaaaca 445557

                                                                          
Query: 393    ctgagcttgcagaacatgtcttgaagcagctcatcctgctagagccccggaattccggaa 452
              | |||||||| |||||||| |||||||||||||| || || |||||| ||||||| || |
Sbjct: 445556 cggagcttgctgaacatgttttgaagcagctcattctactggagccctggaattctggga 445497

                                                                          
Query: 453    attatgtcatgctctcaaacatatactctaacagcaacagatgggaggatgctgcgaagc 512
              | ||||| |||||||| |||||||||||||||||   ||||||||||||||| |||||||
Sbjct: 445496 actatgtaatgctctccaacatatactctaacagaggcagatgggaggatgcagcgaagc 445437

                                                                          
Query: 513    ttagatcggacatgaaggtgaaaggggttgagaaagcccgtgcatatagctgggttgagt 572
              |||||| ||||||||| |  |||||||| ||||| |  | |||||  |||||||||||||
Sbjct: 445436 ttagattggacatgaaagcaaaaggggtcgagaaggttcctgcatgcagctgggttgagt 445377

                
Query: 573    tt 574
              ||
Sbjct: 445376 tt 445375
to top
>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from
              chromosome 11 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 164143

 Score =  432 bits (218), Expect = e-118
 Identities = 461/542 (85%)
 Strand = Plus / Minus

                                                                          
Query: 33     acattgttgtttggaacgcgatgatcttggggctgggcctgactgggcatggtaggattg 92
              ||||| |||||||||| || |||||||||||||| ||| ||||||| ||||  | |||||
Sbjct: 153234 acattattgtttggaatgccatgatcttggggcttggcatgactggccatgaaaagattg 153175

                                                                          
Query: 93     gatttgcccttgtcggcaagatggagaagtcaggcatgaaactgaatgacaacactttca 152
               |||||||||||| ||  ||||||||||||| ||| ||||| |||||||||| |||||||
Sbjct: 153174 catttgcccttgttggtcagatggagaagtctggcgtgaaattgaatgacaatactttca 153115

                                                                          
Query: 153    tcagcattctctgcagctgtacccataccggccttgtaaaagatggacggcggtatttcc 212
              |  || | |||||||||||||| || || |||||  |  ||||||| || ||||||||||
Sbjct: 153114 ttggcttgctctgcagctgtacacacactggcctcattcaagatgggcgacggtatttcc 153055

                                                                          
Query: 213    ataacatgactcagttatacaacatcacgcctaggattgagcactatggttgtatggtcg 272
              ||||||||||| |||||||| ||||||  |||||||||||||| || |||||||||||||
Sbjct: 153054 ataacatgactaagttataccacatcagccctaggattgagcattacggttgtatggtcg 152995

                                                                          
Query: 273    acctgctcagtcgcgctgggttgctccaggaagcccatcagcttattgatgatatgccaa 332
              | ||||||||||||||||||||| | ||||| || ||||| ||| ||||||| |||||||
Sbjct: 152994 atctgctcagtcgcgctgggttgttgcaggaggctcatcaacttgttgatgacatgccaa 152935

                                                                          
Query: 333    tgcaggcaaacgctgtcgtgtggggagcacttcttggtggctgcaagattcaccgagacg 392
              |||  ||||| |||||  | | ||| |||||||||||||||||||||||||||||| || 
Sbjct: 152934 tgccagcaaatgctgttatattgggtgcacttcttggtggctgcaagattcaccgaaaca 152875

                                                                          
Query: 393    ctgagcttgcagaacatgtcttgaagcagctcatcctgctagagccccggaattccggaa 452
              | |||||||| |||||||| |||||||||||||| || || |||||| ||||||| || |
Sbjct: 152874 cggagcttgctgaacatgttttgaagcagctcattctactggagccctggaattctggga 152815

                                                                          
Query: 453    attatgtcatgctctcaaacatatactctaacagcaacagatgggaggatgctgcgaagc 512
              | ||||| |||||||| |||||||||||||||||   ||||||||||||||| |||||||
Sbjct: 152814 actatgtaatgctctccaacatatactctaacagaggcagatgggaggatgcagcgaagc 152755

                                                                          
Query: 513    ttagatcggacatgaaggtgaaaggggttgagaaagcccgtgcatatagctgggttgagt 572
              |||||| ||||||||| |  |||||||| ||||| |  | |||||  |||||||||||||
Sbjct: 152754 ttagattggacatgaaagcaaaaggggtcgagaaggttcctgcatgcagctgggttgagt 152695

                
Query: 573    tt 574
              ||
Sbjct: 152694 tt 152693
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>emb|BX000493.1|CNS08CDJ Oryza sativa chromosome 11, . BAC OSJNBb0037D03 of library OSJNBb from
              chromosome 11 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 130544

 Score =  432 bits (218), Expect = e-118
 Identities = 461/542 (85%)
 Strand = Plus / Plus

                                                                          
Query: 33     acattgttgtttggaacgcgatgatcttggggctgggcctgactgggcatggtaggattg 92
              ||||| |||||||||| || |||||||||||||| ||| ||||||| ||||  | |||||
Sbjct: 124397 acattattgtttggaatgccatgatcttggggcttggcatgactggccatgaaaagattg 124456

                                                                          
Query: 93     gatttgcccttgtcggcaagatggagaagtcaggcatgaaactgaatgacaacactttca 152
               |||||||||||| ||  ||||||||||||| ||| ||||| |||||||||| |||||||
Sbjct: 124457 catttgcccttgttggtcagatggagaagtctggcgtgaaattgaatgacaatactttca 124516

                                                                          
Query: 153    tcagcattctctgcagctgtacccataccggccttgtaaaagatggacggcggtatttcc 212
              |  || | |||||||||||||| || || |||||  |  ||||||| || ||||||||||
Sbjct: 124517 ttggcttgctctgcagctgtacacacactggcctcattcaagatgggcgacggtatttcc 124576

                                                                          
Query: 213    ataacatgactcagttatacaacatcacgcctaggattgagcactatggttgtatggtcg 272
              ||||||||||| |||||||| ||||||  |||||||||||||| || |||||||||||||
Sbjct: 124577 ataacatgactaagttataccacatcagccctaggattgagcattacggttgtatggtcg 124636

                                                                          
Query: 273    acctgctcagtcgcgctgggttgctccaggaagcccatcagcttattgatgatatgccaa 332
              | ||||||||||||||||||||| | ||||| || ||||| ||| ||||||| |||||||
Sbjct: 124637 atctgctcagtcgcgctgggttgttgcaggaggctcatcaacttgttgatgacatgccaa 124696

                                                                          
Query: 333    tgcaggcaaacgctgtcgtgtggggagcacttcttggtggctgcaagattcaccgagacg 392
              |||  ||||| |||||  | | ||| |||||||||||||||||||||||||||||| || 
Sbjct: 124697 tgccagcaaatgctgttatattgggtgcacttcttggtggctgcaagattcaccgaaaca 124756

                                                                          
Query: 393    ctgagcttgcagaacatgtcttgaagcagctcatcctgctagagccccggaattccggaa 452
              | |||||||| |||||||| |||||||||||||| || || |||||| ||||||| || |
Sbjct: 124757 cggagcttgctgaacatgttttgaagcagctcattctactggagccctggaattctggga 124816

                                                                          
Query: 453    attatgtcatgctctcaaacatatactctaacagcaacagatgggaggatgctgcgaagc 512
              | ||||| |||||||| |||||||||||||||||   ||||||||||||||| |||||||
Sbjct: 124817 actatgtaatgctctccaacatatactctaacagaggcagatgggaggatgcagcgaagc 124876

                                                                          
Query: 513    ttagatcggacatgaaggtgaaaggggttgagaaagcccgtgcatatagctgggttgagt 572
              |||||| ||||||||| |  |||||||| ||||| |  | |||||  |||||||||||||
Sbjct: 124877 ttagattggacatgaaagcaaaaggggtcgagaaggttcctgcatgcagctgggttgagt 124936

                
Query: 573    tt 574
              ||
Sbjct: 124937 tt 124938
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score =  408 bits (206), Expect = e-111
 Identities = 458/542 (84%)
 Strand = Plus / Minus

                                                                          
Query: 33     acattgttgtttggaacgcgatgatcttggggctgggcctgactgggcatggtaggattg 92
              ||||| ||||||||||||| |||||||||||||| ||| ||||||| ||||  | || ||
Sbjct: 500216 acattattgtttggaacgccatgatcttggggcttggcatgactggccatgaaaagactg 500157

                                                                          
Query: 93     gatttgcccttgtcggcaagatggagaagtcaggcatgaaactgaatgacaacactttca 152
               |||| ||||| ||||  ||||||||||||| ||  ||||| |||||||||| |||||||
Sbjct: 500156 catttacccttatcggtcagatggagaagtccggtgtgaaattgaatgacaatactttca 500097

                                                                          
Query: 153    tcagcattctctgcagctgtacccataccggccttgtaaaagatggacggcggtatttcc 212
              |  || | |||||||||||||| || || |||||  |  ||||||| || ||||||||||
Sbjct: 500096 ttggcttgctctgcagctgtacacacactggcctcattcaagatgggcgacggtatttcc 500037

                                                                          
Query: 213    ataacatgactcagttatacaacatcacgcctaggattgagcactatggttgtatggtcg 272
              ||||||||||| || ||||| ||||||  |||||||||||||| || |||||||| ||||
Sbjct: 500036 ataacatgactaagctataccacatcagccctaggattgagcattacggttgtatagtcg 499977

                                                                          
Query: 273    acctgctcagtcgcgctgggttgctccaggaagcccatcagcttattgatgatatgccaa 332
              | ||||||||||||||||||||| | ||||| || ||||||||||||||||||||||| |
Sbjct: 499976 atctgctcagtcgcgctgggttgttgcaggaggctcatcagcttattgatgatatgccga 499917

                                                                          
Query: 333    tgcaggcaaacgctgtcgtgtggggagcacttcttggtggctgcaagattcaccgagacg 392
              |||  ||||| |||||| | | ||| |||||||||||||||||||||||||||||| | |
Sbjct: 499916 tgccagcaaatgctgtcatattgggtgcacttcttggtggctgcaagattcaccgaaatg 499857

                                                                          
Query: 393    ctgagcttgcagaacatgtcttgaagcagctcatcctgctagagccccggaattccggaa 452
              | |||||||| |||||||| |||| ||||||||| |  || |||||| ||||||| || |
Sbjct: 499856 cagagcttgctgaacatgtattgacgcagctcattcgactggagccctggaattctggga 499797

                                                                          
Query: 453    attatgtcatgctctcaaacatatactctaacagcaacagatgggaggatgctgcgaagc 512
              | |||||||||||||| |||||||||||||||||   |||||||||||| || || ||||
Sbjct: 499796 actatgtcatgctctctaacatatactctaacagaggcagatgggaggacgcagcaaagc 499737

                                                                          
Query: 513    ttagatcggacatgaaggtgaaaggggttgagaaagcccgtgcatatagctgggttgagt 572
              |||||| |||||||||||  |||||||| ||||| |  | |||||  |||||||||||||
Sbjct: 499736 ttagattggacatgaaggaaaaaggggtcgagaaggttcctgcatgcagctgggttgagt 499677

                
Query: 573    tt 574
              ||
Sbjct: 499676 tt 499675
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>dbj|AK103426.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128L01, full
            insert sequence
          Length = 2413

 Score =  408 bits (206), Expect = e-111
 Identities = 458/542 (84%)
 Strand = Plus / Plus

                                                                        
Query: 33   acattgttgtttggaacgcgatgatcttggggctgggcctgactgggcatggtaggattg 92
            ||||| ||||||||||||| |||||||||||||| ||| ||||||| ||||  | || ||
Sbjct: 1047 acattattgtttggaacgccatgatcttggggcttggcatgactggccatgaaaagactg 1106

                                                                        
Query: 93   gatttgcccttgtcggcaagatggagaagtcaggcatgaaactgaatgacaacactttca 152
             |||| ||||| ||||  ||||||||||||| ||  ||||| |||||||||| |||||||
Sbjct: 1107 catttacccttatcggtcagatggagaagtccggtgtgaaattgaatgacaatactttca 1166

                                                                        
Query: 153  tcagcattctctgcagctgtacccataccggccttgtaaaagatggacggcggtatttcc 212
            |  || | |||||||||||||| || || |||||  |  ||||||| || ||||||||||
Sbjct: 1167 ttggcttgctctgcagctgtacacacactggcctcattcaagatgggcgacggtatttcc 1226

                                                                        
Query: 213  ataacatgactcagttatacaacatcacgcctaggattgagcactatggttgtatggtcg 272
            ||||||||||| || ||||| ||||||  |||||||||||||| || |||||||| ||||
Sbjct: 1227 ataacatgactaagctataccacatcagccctaggattgagcattacggttgtatagtcg 1286

                                                                        
Query: 273  acctgctcagtcgcgctgggttgctccaggaagcccatcagcttattgatgatatgccaa 332
            | ||||||||||||||||||||| | ||||| || ||||||||||||||||||||||| |
Sbjct: 1287 atctgctcagtcgcgctgggttgttgcaggaggctcatcagcttattgatgatatgccga 1346

                                                                        
Query: 333  tgcaggcaaacgctgtcgtgtggggagcacttcttggtggctgcaagattcaccgagacg 392
            |||  ||||| |||||| | | ||| |||||||||||||||||||||||||||||| | |
Sbjct: 1347 tgccagcaaatgctgtcatattgggtgcacttcttggtggctgcaagattcaccgaaatg 1406

                                                                        
Query: 393  ctgagcttgcagaacatgtcttgaagcagctcatcctgctagagccccggaattccggaa 452
            | |||||||| |||||||| |||| ||||||||| |  || |||||| ||||||| || |
Sbjct: 1407 cagagcttgctgaacatgtattgacgcagctcattcgactggagccctggaattctggga 1466

                                                                        
Query: 453  attatgtcatgctctcaaacatatactctaacagcaacagatgggaggatgctgcgaagc 512
            | |||||||||||||| |||||||||||||||||   |||||||||||| || || ||||
Sbjct: 1467 actatgtcatgctctctaacatatactctaacagaggcagatgggaggacgcagcaaagc 1526

                                                                        
Query: 513  ttagatcggacatgaaggtgaaaggggttgagaaagcccgtgcatatagctgggttgagt 572
            |||||| |||||||||||  |||||||| ||||| |  | |||||  |||||||||||||
Sbjct: 1527 ttagattggacatgaaggaaaaaggggtcgagaaggttcctgcatgcagctgggttgagt 1586

              
Query: 573  tt 574
            ||
Sbjct: 1587 tt 1588
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  408 bits (206), Expect = e-111
 Identities = 458/542 (84%)
 Strand = Plus / Minus

                                                                          
Query: 33     acattgttgtttggaacgcgatgatcttggggctgggcctgactgggcatggtaggattg 92
              ||||| ||||||||||||| |||||||||||||| ||| ||||||| ||||  | || ||
Sbjct: 500216 acattattgtttggaacgccatgatcttggggcttggcatgactggccatgaaaagactg 500157

                                                                          
Query: 93     gatttgcccttgtcggcaagatggagaagtcaggcatgaaactgaatgacaacactttca 152
               |||| ||||| ||||  ||||||||||||| ||  ||||| |||||||||| |||||||
Sbjct: 500156 catttacccttatcggtcagatggagaagtccggtgtgaaattgaatgacaatactttca 500097

                                                                          
Query: 153    tcagcattctctgcagctgtacccataccggccttgtaaaagatggacggcggtatttcc 212
              |  || | |||||||||||||| || || |||||  |  ||||||| || ||||||||||
Sbjct: 500096 ttggcttgctctgcagctgtacacacactggcctcattcaagatgggcgacggtatttcc 500037

                                                                          
Query: 213    ataacatgactcagttatacaacatcacgcctaggattgagcactatggttgtatggtcg 272
              ||||||||||| || ||||| ||||||  |||||||||||||| || |||||||| ||||
Sbjct: 500036 ataacatgactaagctataccacatcagccctaggattgagcattacggttgtatagtcg 499977

                                                                          
Query: 273    acctgctcagtcgcgctgggttgctccaggaagcccatcagcttattgatgatatgccaa 332
              | ||||||||||||||||||||| | ||||| || ||||||||||||||||||||||| |
Sbjct: 499976 atctgctcagtcgcgctgggttgttgcaggaggctcatcagcttattgatgatatgccga 499917

                                                                          
Query: 333    tgcaggcaaacgctgtcgtgtggggagcacttcttggtggctgcaagattcaccgagacg 392
              |||  ||||| |||||| | | ||| |||||||||||||||||||||||||||||| | |
Sbjct: 499916 tgccagcaaatgctgtcatattgggtgcacttcttggtggctgcaagattcaccgaaatg 499857

                                                                          
Query: 393    ctgagcttgcagaacatgtcttgaagcagctcatcctgctagagccccggaattccggaa 452
              | |||||||| |||||||| |||| ||||||||| |  || |||||| ||||||| || |
Sbjct: 499856 cagagcttgctgaacatgtattgacgcagctcattcgactggagccctggaattctggga 499797

                                                                          
Query: 453    attatgtcatgctctcaaacatatactctaacagcaacagatgggaggatgctgcgaagc 512
              | |||||||||||||| |||||||||||||||||   |||||||||||| || || ||||
Sbjct: 499796 actatgtcatgctctctaacatatactctaacagaggcagatgggaggacgcagcaaagc 499737

                                                                          
Query: 513    ttagatcggacatgaaggtgaaaggggttgagaaagcccgtgcatatagctgggttgagt 572
              |||||| |||||||||||  |||||||| ||||| |  | |||||  |||||||||||||
Sbjct: 499736 ttagattggacatgaaggaaaaaggggtcgagaaggttcctgcatgcagctgggttgagt 499677

                
Query: 573    tt 574
              ||
Sbjct: 499676 tt 499675
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>emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa0024J08 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 141089

 Score =  408 bits (206), Expect = e-111
 Identities = 458/542 (84%)
 Strand = Plus / Plus

                                                                         
Query: 33    acattgttgtttggaacgcgatgatcttggggctgggcctgactgggcatggtaggattg 92
             ||||| ||||||||||||| |||||||||||||| ||| ||||||| ||||  | || ||
Sbjct: 46556 acattattgtttggaacgccatgatcttggggcttggcatgactggccatgaaaagactg 46615

                                                                         
Query: 93    gatttgcccttgtcggcaagatggagaagtcaggcatgaaactgaatgacaacactttca 152
              |||| ||||| ||||  ||||||||||||| ||  ||||| |||||||||| |||||||
Sbjct: 46616 catttacccttatcggtcagatggagaagtccggtgtgaaattgaatgacaatactttca 46675

                                                                         
Query: 153   tcagcattctctgcagctgtacccataccggccttgtaaaagatggacggcggtatttcc 212
             |  || | |||||||||||||| || || |||||  |  ||||||| || ||||||||||
Sbjct: 46676 ttggcttgctctgcagctgtacacacactggcctcattcaagatgggcgacggtatttcc 46735

                                                                         
Query: 213   ataacatgactcagttatacaacatcacgcctaggattgagcactatggttgtatggtcg 272
             ||||||||||| || ||||| ||||||  |||||||||||||| || |||||||| ||||
Sbjct: 46736 ataacatgactaagctataccacatcagccctaggattgagcattacggttgtatagtcg 46795

                                                                         
Query: 273   acctgctcagtcgcgctgggttgctccaggaagcccatcagcttattgatgatatgccaa 332
             | ||||||||||||||||||||| | ||||| || ||||||||||||||||||||||| |
Sbjct: 46796 atctgctcagtcgcgctgggttgttgcaggaggctcatcagcttattgatgatatgccga 46855

                                                                         
Query: 333   tgcaggcaaacgctgtcgtgtggggagcacttcttggtggctgcaagattcaccgagacg 392
             |||  ||||| |||||| | | ||| |||||||||||||||||||||||||||||| | |
Sbjct: 46856 tgccagcaaatgctgtcatattgggtgcacttcttggtggctgcaagattcaccgaaatg 46915

                                                                         
Query: 393   ctgagcttgcagaacatgtcttgaagcagctcatcctgctagagccccggaattccggaa 452
             | |||||||| |||||||| |||| ||||||||| |  || |||||| ||||||| || |
Sbjct: 46916 cagagcttgctgaacatgtattgacgcagctcattcgactggagccctggaattctggga 46975

                                                                         
Query: 453   attatgtcatgctctcaaacatatactctaacagcaacagatgggaggatgctgcgaagc 512
             | |||||||||||||| |||||||||||||||||   |||||||||||| || || ||||
Sbjct: 46976 actatgtcatgctctctaacatatactctaacagaggcagatgggaggacgcagcaaagc 47035

                                                                         
Query: 513   ttagatcggacatgaaggtgaaaggggttgagaaagcccgtgcatatagctgggttgagt 572
             |||||| |||||||||||  |||||||| ||||| |  | |||||  |||||||||||||
Sbjct: 47036 ttagattggacatgaaggaaaaaggggtcgagaaggttcctgcatgcagctgggttgagt 47095

               
Query: 573   tt 574
             ||
Sbjct: 47096 tt 47097
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>emb|CT010504.7| M.truncatula DNA sequence from clone MTH2-28A3 on chromosome 3,
             complete sequence
          Length = 114882

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 249   ttgagcactatggttgtatggtcgacct 276
             |||||||||||||||||||||| |||||
Sbjct: 44846 ttgagcactatggttgtatggttgacct 44819
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>ref|XM_470148.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1809

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 241  gcctaggattgagcactatggttgtatggt 270
            ||||| |||||||||||||||||| |||||
Sbjct: 1092 gcctaagattgagcactatggttgcatggt 1121
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 241      gcctaggattgagcactatggttgtatggt 270
                ||||| |||||||||||||||||| |||||
Sbjct: 34191868 gcctaagattgagcactatggttgcatggt 34191839
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 241      gcctaggattgagcactatggttgtatggt 270
                ||||| |||||||||||||||||| |||||
Sbjct: 34282340 gcctaagattgagcactatggttgcatggt 34282311
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>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete
              sequence
          Length = 163828

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 241    gcctaggattgagcactatggttgtatggt 270
              ||||| |||||||||||||||||| |||||
Sbjct: 155680 gcctaagattgagcactatggttgcatggt 155651
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>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence, complete
              sequence
          Length = 143205

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 241    gcctaggattgagcactatggttgtatggt 270
              ||||| |||||||||||||||||| |||||
Sbjct: 143130 gcctaagattgagcactatggttgcatggt 143159
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>dbj|AK102999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116F23, full
            insert sequence
          Length = 2484

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 241  gcctaggattgagcactatggttgtatggt 270
            ||||| |||||||||||||||||| |||||
Sbjct: 1105 gcctaagattgagcactatggttgcatggt 1134
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>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence
          Length = 405672

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 251    gagcactatggttgtatggtcgacctgct 279
              |||||||||||||| ||||| ||||||||
Sbjct: 178694 gagcactatggttgcatggttgacctgct 178722
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>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence
          Length = 323584

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 251    gagcactatggttgtatggtcgacctgct 279
              |||||||||||||| ||||| ||||||||
Sbjct: 166795 gagcactatggttgcatggttgacctgct 166823
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>gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0059G01, complete sequence
          Length = 141661

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 250   tgagcactatggttgtatgg 269
             ||||||||||||||||||||
Sbjct: 11881 tgagcactatggttgtatgg 11900
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>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16,
              complete sequence
          Length = 159525

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    tgagcactatggttgtatgg 269
              ||||||||||||||||||||
Sbjct: 118653 tgagcactatggttgtatgg 118672
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>gb|AC171267.17| Medicago truncatula clone mth2-17i7, complete sequence
          Length = 108819

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 350    gtgtggggagcacttcttgg 369
              ||||||||||||||||||||
Sbjct: 103936 gtgtggggagcacttcttgg 103917
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>gb|AC072048.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-189E15, complete
              sequence
          Length = 208661

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 153    tcagcattctctgcagctgt 172
              ||||||||||||||||||||
Sbjct: 116095 tcagcattctctgcagctgt 116076
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>gb|BT011037.1| Drosophila melanogaster RE42582 full insert cDNA
          Length = 745

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 51  cgatgatcttggggctgggc 70
           ||||||||||||||||||||
Sbjct: 373 cgatgatcttggggctgggc 354
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>gb|AC121895.3| Mus musculus BAC clone RP24-157P5 from chromosome 2, complete sequence
          Length = 171557

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 126    gcatgaaactgaatgacaac 145
              ||||||||||||||||||||
Sbjct: 142919 gcatgaaactgaatgacaac 142900
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>gb|AC122059.1| Mus musculus BAC clone RP24-468J3 from 1, complete sequence
          Length = 162681

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   tctctgcagctgtacccata 179
             ||||||||||||||||||||
Sbjct: 16233 tctctgcagctgtacccata 16252
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>gb|AY307975.1| Drosophila mauritiana cytochrome c oxidase polypeptide Va gene,
           complete cds; nuclear gene for mitochondrial product
          Length = 450

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 51  cgatgatcttggggctgggc 70
           ||||||||||||||||||||
Sbjct: 232 cgatgatcttggggctgggc 213
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>gb|AY307961.1| Drosophila simulans from Kenya cytochrome c oxidase polypeptide Va
           gene, complete cds; nuclear gene for mitochondrial
           product
          Length = 450

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 51  cgatgatcttggggctgggc 70
           ||||||||||||||||||||
Sbjct: 232 cgatgatcttggggctgggc 213
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>gb|AY307960.1| Drosophila simulans from Seychelles cytochrome c oxidase
           polypeptide Va gene, complete cds; nuclear gene for
           mitochondrial product
          Length = 450

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 51  cgatgatcttggggctgggc 70
           ||||||||||||||||||||
Sbjct: 232 cgatgatcttggggctgggc 213
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>gb|AC146852.15| Medicago truncatula clone mth2-58k21, complete sequence
          Length = 145314

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 250   tgagcactatggttgtatggtcgacctg 277
             ||||||||||||||| ||||| ||||||
Sbjct: 41221 tgagcactatggttgcatggttgacctg 41248
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>gb|AC135320.6| Medicago truncatula clone mth2-28e9, complete sequence
          Length = 108644

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 250   tgagcactatggttgtatggtcgacctg 277
             ||||||||||||||| ||||| ||||||
Sbjct: 49691 tgagcactatggttgcatggttgacctg 49664
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>emb|AL583888.9| Human DNA sequence from clone RP11-132E18 on chromosome 10, complete
             sequence
          Length = 17260

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 113   atggagaagtcaggcatgaaactg 136
             |||||| |||||||||||||||||
Sbjct: 13560 atggaggagtcaggcatgaaactg 13583
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>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence
          Length = 1192501

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 519    cggacatgaaggtgaaaggg 538
              ||||||||||||||||||||
Sbjct: 346366 cggacatgaaggtgaaaggg 346347
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>emb|AL161554.2|ATCHRIV54 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 54
          Length = 198715

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 242   cctaggattgagcactatggttgtatggtcga 273
             |||||||| ||||| | |||||||||||||||
Sbjct: 58624 cctaggatcgagcattttggttgtatggtcga 58655
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>emb|AL080282.1|ATT13K14 Arabidopsis thaliana DNA chromosome 4, BAC clone T13K14 (ESSA project)
          Length = 91570

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 242   cctaggattgagcactatggttgtatggtcga 273
             |||||||| ||||| | |||||||||||||||
Sbjct: 86146 cctaggatcgagcattttggttgtatggtcga 86177
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>emb|AL021960.2|ATF7J7 Arabidopsis thaliana DNA chromosome 4, BAC clone  F7J7 (ESSA
           project)
          Length = 91387

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 242 cctaggattgagcactatggttgtatggtcga 273
           |||||||| ||||| | |||||||||||||||
Sbjct: 422 cctaggatcgagcattttggttgtatggtcga 453
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>emb|BX842687.13| Zebrafish DNA sequence from clone DKEY-97L11 in linkage group 7, complete
              sequence
          Length = 218252

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 127    catgaaactgaatgacaaca 146
              ||||||||||||||||||||
Sbjct: 155849 catgaaactgaatgacaaca 155868
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>ref|NM_169436.1| Drosophila melanogaster Cytochrome c oxidase subunit Va CG14724-RB,
           transcript variant B (CoVa), mRNA
          Length = 671

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 51  cgatgatcttggggctgggc 70
           ||||||||||||||||||||
Sbjct: 307 cgatgatcttggggctgggc 288
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>ref|NM_057869.3| Drosophila melanogaster Cytochrome c oxidase subunit Va CG14724-RA,
           transcript variant A (CoVa), mRNA
          Length = 739

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 51  cgatgatcttggggctgggc 70
           ||||||||||||||||||||
Sbjct: 374 cgatgatcttggggctgggc 355
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 250     tgagcactatggttgtatgg 269
               ||||||||||||||||||||
Sbjct: 3024637 tgagcactatggttgtatgg 3024656
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>emb|BX826462.1|CNS0A4C1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB28ZF03 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1853

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 242  cctaggattgagcactatggttgtatggtcga 273
            |||||||| ||||| | |||||||||||||||
Sbjct: 1094 cctaggatcgagcattttggttgtatggtcga 1125
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>emb|BX827021.1|CNS0A3CK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB88ZD10 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1710

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 242  cctaggattgagcactatggttgtatggtcga 273
            |||||||| ||||| | |||||||||||||||
Sbjct: 996  cctaggatcgagcattttggttgtatggtcga 1027
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>emb|BX826365.1|CNS0A35W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB19ZH02 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1667

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 242  cctaggattgagcactatggttgtatggtcga 273
            |||||||| ||||| | |||||||||||||||
Sbjct: 972  cctaggatcgagcattttggttgtatggtcga 1003
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>gb|AC008307.7|AC008307 Drosophila melanogaster, chromosome 3R, region 86F-87A, BAC clone
             BACR03D22, complete sequence
          Length = 157189

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    cgatgatcttggggctgggc 70
             ||||||||||||||||||||
Sbjct: 46781 cgatgatcttggggctgggc 46762
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>gb|AC153909.5| Mus musculus 6 BAC RP23-190O15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 226538

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    tcagcattctctgcagctgt 172
              ||||||||||||||||||||
Sbjct: 222438 tcagcattctctgcagctgt 222457
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>emb|BX004818.16| Zebrafish DNA sequence from clone DKEY-64O12, complete sequence
          Length = 215899

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 123    caggcatgaaactgaatgacaacacttt 150
              ||||||| |||||| |||||||||||||
Sbjct: 111294 caggcataaaactgtatgacaacacttt 111321
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>dbj|AK108071.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-C07, full
            insert sequence
          Length = 1698

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  tgagcactatggttgtatgg 269
            ||||||||||||||||||||
Sbjct: 1227 tgagcactatggttgtatgg 1246
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>gb|AE003693.3| Drosophila melanogaster chromosome 3R, section 31 of 118 of the
             complete sequence
          Length = 226782

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    cgatgatcttggggctgggc 70
             ||||||||||||||||||||
Sbjct: 68860 cgatgatcttggggctgggc 68841
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>emb|AL929440.5| Mouse DNA sequence from clone RP23-292F11 on chromosome 2, complete
             sequence
          Length = 143594

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   gcatgaaactgaatgacaac 145
             ||||||||||||||||||||
Sbjct: 80323 gcatgaaactgaatgacaac 80304
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>gb|AC116954.4| Mus musculus BAC clone RP23-387L22 from 1, complete sequence
          Length = 191002

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 160  tctctgcagctgtacccata 179
            ||||||||||||||||||||
Sbjct: 8897 tctctgcagctgtacccata 8878


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,682,165
Number of Sequences: 3902068
Number of extensions: 4682165
Number of successful extensions: 85061
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84860
Number of HSP's gapped (non-prelim): 201
length of query: 586
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 563
effective length of database: 17,143,297,704
effective search space: 9651676607352
effective search space used: 9651676607352
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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