ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags19n09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC123519.2| Oryza sativa (japonica cultivar-group) chromosome... 88 4e-14
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 88 4e-14
4gb|AC145812.3| Oryza sativa (japonica cultivar-group) chromosome... 78 4e-11
5dbj|AK119786.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
6dbj|AK104429.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
7dbj|AK104082.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
8dbj|AK069955.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
9dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 70 9e-09
10dbj|AK100760.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 9e-09
11dbj|AK059453.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 9e-09
12gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 70 9e-09
13emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb... 70 9e-09
14gb|BT018406.1| Zea mays clone EL01N0326A05.d mRNA sequence 48 0.033
15gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 46 0.13
16emb|AL354815.10| Human DNA sequence from clone RP11-760M1 on chr... 44 0.52
17gb|AC109815.5| Homo sapiens BAC clone CTD-2192H8 from 2, complet... 44 0.52
18gb|AC123886.7| Homo sapiens BAC clone RP11-404O21 from 2, comple... 44 0.52
19dbj|AK072692.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.52
20gb|AC151766.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 42 2.1
21gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 42 2.1
22gb|AC079852.3| Oryza sativa chromosome 10 clone OSJNBa0034A02, c... 42 2.1
23gb|U82749.1|MAU82749 Mycobacterium avium glyceraldehyde-3-phosph... 42 2.1
24dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
25dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 2.1
26gb|AY111776.1| Zea mays CL39796_1 mRNA sequence 42 2.1
27gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
28gb|AC125180.6| Mus musculus BAC clone RP23-322K1 from chromosome... 40 8.1
29gb|AC164157.3| Mus musculus BAC clone RP24-297C1 from chromosome... 40 8.1
30gb|DQ215467.1| Taeniopygia guttata clone 0058P0010H07 MGC15397 v... 40 8.1
31ref|NM_001030604.1| Gallus gallus SLIT-ROBO Rho GTPase activatin... 40 8.1
32ref|XM_469478.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.1
33ref|NM_015209.1| Homo sapiens kazrin (KIAA1026), transcript vari... 40 8.1
34ref|XM_513047.1| PREDICTED: Pan troglodytes similar to KIAA1026 ... 40 8.1
35gb|BC050920.1| Mus musculus atrophin 1, mRNA (cDNA clone MGC:632... 40 8.1
36gb|AY505119.1| Homo sapiens kazrin isoform A mRNA, complete cds 40 8.1
37ref|XM_882735.1| PREDICTED: Bos taurus hypothetical protein LOC6... 40 8.1
38gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 8.1
39ref|NM_007881.4| Mus musculus atrophin 1 (Atn1), mRNA 40 8.1
40gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.1
41ref|XM_977723.1| PREDICTED: Mus musculus hypothetical protein LO... 40 8.1
42ref|XM_989737.1| PREDICTED: Mus musculus hypothetical protein LO... 40 8.1
43ref|XM_001003232.1| PREDICTED: Mus musculus hypothetical protein... 40 8.1
44ref|XM_542202.2| PREDICTED: Canis familiaris similar to adenomat... 40 8.1
45ref|XM_533529.2| PREDICTED: Canis familiaris similar to SMC5 pro... 40 8.1
46ref|XM_844186.1| PREDICTED: Canis familiaris similar to Growth-a... 40 8.1
47ref|NM_017228.1| Rattus norvegicus atrophin 1 (Atn1), mRNA 40 8.1
48emb|AL391597.15| Human DNA sequence from clone RP11-357P18 on ch... 40 8.1
49emb|AL034395.6|HS243L18 Human DNA sequence from clone RP1-243L18... 40 8.1
50emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 40 8.1
51emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genom... 40 8.1
52emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete ... 40 8.1
53emb|AJ719759.1| Gallus gallus mRNA for hypothetical protein, clo... 40 8.1
54gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 8.1
55gb|AC183275.3| Pan troglodytes BAC clone CH251-16D10 from chromo... 40 8.1
56gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 8.1
57dbj|AB028949.1| Homo sapiens mRNA for KIAA1026 protein, partial cds 40 8.1
58gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 8.1
59gb|U31777.1|RNU31777 Rattus norvegicus atrophin-1 (DRPLA) mRNA, ... 40 8.1
60gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genom... 40 8.1
61gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 8.1
62gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 8.1
63gb|AF298154.1|AF298154 Arcanobacterium pyogenes BirA (birA) gene... 40 8.1
64gb|AE006470.1| Chlorobium tepidum TLS, complete genome 40 8.1
65dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
66gb|AC022210.8| Homo sapiens BAC clone RP11-617F9 from 2, complet... 40 8.1
67gb|AF271693.1|AF271693 Mycobacteriophage Bxb1, complete sequence 40 8.1
68dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 8.1
69gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 8.1
70dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 8.1
71dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 8.1
72dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 40 8.1
73ref|NM_210247.1| Eremothecium gossypii AER033Wp (AER033W), mRNA 40 8.1
74gb|BT023990.1| Zea mays clone EL01N0412C01 mRNA sequence 40 8.1
75gb|BC036877.1| Homo sapiens cDNA clone IMAGE:5242289, partial cds 40 8.1
76gb|AY781175.1| Oryza sativa (indica cultivar-group) gibberellic ... 40 8.1
77gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 8.1
78gb|AC002397.1|AC002397 Mouse chromosome 6 BAC-284H12 (Research G... 40 8.1
79gb|AY500153.1| Mycobacteriophage Bethlehem, complete genome 40 8.1
80gb|AY500152.1| Mycobacteriophage U2, complete genome 40 8.1
81dbj|AB030956.1| Oryza sativa (japonica cultivar-group) mRNA for ... 40 8.1

>gb|AC123519.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0017B18,
              complete sequence
          Length = 150279

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                          
Query: 307    tgcaccttcaacggcgcgtggaacggcggcggcggccccggccaggccgagctctacgtc 366
              |||| ||||||||||| |||||||||||||||||||   || |||| |||| ||||||||
Sbjct: 102678 tgcagcttcaacggcgtgtggaacggcggcggcggcgttgggcaggacgagatctacgtc 102737

                                  
Query: 367    acctccagcttctactacat 386
              || |||||||||||||||||
Sbjct: 102738 acatccagcttctactacat 102757



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                          
Query: 299    ccaagaactgcaccttcaacggcgcgtggaacggcggcggcggccccggccaggccgagc 358
              |||| ||||||| ||||||||| | ||||||||||||||| ||| | || |||| |||||
Sbjct: 122869 ccaacaactgcagcttcaacggagtgtggaacggcggcggtggcgctgggcaggacgagc 122928

                                             
Query: 359    tctacgtcacctccagcttctactacatggc 389
              |||||||  |  |||| ||||||||||||||
Sbjct: 122929 tctacgttgcgaccagtttctactacatggc 122959



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                   
Query: 181    ggcaaatacacctacaacggggagcaatacgacgccatagcagcaccgcaagg 233
              ||||||| |||||||||||||||||| ||||| || || |||||||| |||||
Sbjct: 102552 ggcaaattcacctacaacggggagcagtacgaagcaatggcagcaccacaagg 102604



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                        
Query: 299   ccaagaactgcaccttcaacggcgcgtggaacggcggcggcgg 341
             |||||||||||| |||||||||||  |||||||| || |||||
Sbjct: 75039 ccaagaactgcagcttcaacggcgtctggaacggtggtggcgg 75081



to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                           
Query: 307     tgcaccttcaacggcgcgtggaacggcggcggcggccccggccaggccgagctctacgtc 366
               |||| ||||||||||| |||||||||||||||||||   || |||| |||| ||||||||
Sbjct: 1206872 tgcagcttcaacggcgtgtggaacggcggcggcggcgttgggcaggacgagatctacgtc 1206931

                                   
Query: 367     acctccagcttctactacat 386
               || |||||||||||||||||
Sbjct: 1206932 acatccagcttctactacat 1206951



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                            
Query: 303      gaactgcaccttcaacggcgcgtggaacggcggcggcggccccggccaggccgagctcta 362
                |||||||| ||||||||||| ||||||||||||||||||| |||||  |||||| |||||
Sbjct: 13850926 gaactgcagcttcaacggcgtgtggaacggcggcggcggcgccggcatggccgacctcta 13850867

                   
Query: 363      cgt 365
                |||
Sbjct: 13850866 cgt 13850864



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                            
Query: 303      gaactgcaccttcaacggcgcgtggaacggcggcggcggccccggccaggccgagctcta 362
                |||||||| ||||||||||| ||||||||||||||||||| |||||  |||||| |||||
Sbjct: 13814444 gaactgcagcttcaacggcgtgtggaacggcggcggcggcgccggcatggccgacctcta 13814385

                   
Query: 363      cgt 365
                |||
Sbjct: 13814384 cgt 13814382



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                           
Query: 299     ccaagaactgcaccttcaacggcgcgtggaacggcggcggcggccccggccaggccgagc 358
               |||| ||||||| ||||||||| | ||||||||||||||| ||| | || |||| |||||
Sbjct: 1227063 ccaacaactgcagcttcaacggagtgtggaacggcggcggtggcgctgggcaggacgagc 1227122

                                              
Query: 359     tctacgtcacctccagcttctactacatggc 389
               |||||||  |  |||| ||||||||||||||
Sbjct: 1227123 tctacgttgcgaccagtttctactacatggc 1227153



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                    
Query: 181     ggcaaatacacctacaacggggagcaatacgacgccatagcagcaccgcaagg 233
               ||||||| |||||||||||||||||| ||||| || || |||||||| |||||
Sbjct: 1206746 ggcaaattcacctacaacggggagcagtacgaagcaatggcagcaccacaagg 1206798



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                          
Query: 299     ccaagaactgcaccttcaacggcgcgtggaacggcggcggcgg 341
               |||||||||||| |||||||||||  |||||||| || |||||
Sbjct: 1179233 ccaagaactgcagcttcaacggcgtctggaacggtggtggcgg 1179275



to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                           
Query: 307     tgcaccttcaacggcgcgtggaacggcggcggcggccccggccaggccgagctctacgtc 366
               |||| ||||||||||| |||||||||||||||||||   || |||| |||| ||||||||
Sbjct: 1204593 tgcagcttcaacggcgtgtggaacggcggcggcggcgttgggcaggacgagatctacgtc 1204652

                                   
Query: 367     acctccagcttctactacat 386
               || |||||||||||||||||
Sbjct: 1204653 acatccagcttctactacat 1204672



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                            
Query: 303      gaactgcaccttcaacggcgcgtggaacggcggcggcggccccggccaggccgagctcta 362
                |||||||| ||||||||||| ||||||||||||||||||| |||||  |||||| |||||
Sbjct: 13932928 gaactgcagcttcaacggcgtgtggaacggcggcggcggcgccggcatggccgacctcta 13932869

                   
Query: 363      cgt 365
                |||
Sbjct: 13932868 cgt 13932866



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                            
Query: 303      gaactgcaccttcaacggcgcgtggaacggcggcggcggccccggccaggccgagctcta 362
                |||||||| ||||||||||| ||||||||||||||||||| |||||  |||||| |||||
Sbjct: 13896446 gaactgcagcttcaacggcgtgtggaacggcggcggcggcgccggcatggccgacctcta 13896387

                   
Query: 363      cgt 365
                |||
Sbjct: 13896386 cgt 13896384



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                           
Query: 299     ccaagaactgcaccttcaacggcgcgtggaacggcggcggcggccccggccaggccgagc 358
               |||| ||||||| ||||||||| | ||||||||||||||| ||| | || |||| |||||
Sbjct: 1224784 ccaacaactgcagcttcaacggagtgtggaacggcggcggtggcgctgggcaggacgagc 1224843

                                              
Query: 359     tctacgtcacctccagcttctactacatggc 389
               |||||||  |  |||| ||||||||||||||
Sbjct: 1224844 tctacgttgcgaccagtttctactacatggc 1224874



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                    
Query: 181     ggcaaatacacctacaacggggagcaatacgacgccatagcagcaccgcaagg 233
               ||||||| |||||||||||||||||| ||||| || || |||||||| |||||
Sbjct: 1204467 ggcaaattcacctacaacggggagcagtacgaagcaatggcagcaccacaagg 1204519



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                          
Query: 299     ccaagaactgcaccttcaacggcgcgtggaacggcggcggcgg 341
               |||||||||||| |||||||||||  |||||||| || |||||
Sbjct: 1176954 ccaagaactgcagcttcaacggcgtctggaacggtggtggcgg 1176996



to top

>gb|AC145812.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0096A19 map near 50283S, complete sequence
          Length = 139969

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                         
Query: 303   gaactgcaccttcaacggcgcgtggaacggcggcggcggccccggccaggccgagctcta 362
             |||||||| ||||||||||| ||||||||||||||||||| |||||  |||||| |||||
Sbjct: 88485 gaactgcagcttcaacggcgtgtggaacggcggcggcggcgccggcatggccgacctcta 88426

                
Query: 363   cgt 365
             |||
Sbjct: 88425 cgt 88423



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                         
Query: 303   gaactgcaccttcaacggcgcgtggaacggcggcggcggccccggccaggccgagctcta 362
             |||||||| ||||||||||| ||||||||||||||||||| |||||  |||||| |||||
Sbjct: 52003 gaactgcagcttcaacggcgtgtggaacggcggcggcggcgccggcatggccgacctcta 51944

                
Query: 363   cgt 365
             |||
Sbjct: 51943 cgt 51941



to top

>dbj|AK119786.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-F08, full
            insert sequence
          Length = 1689

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                        
Query: 303  gaactgcaccttcaacggcgcgtggaacggcggcggcggccccggccaggccgagctcta 362
            |||||||| ||||||||||| ||||||||||||||||||| |||||  |||||| |||||
Sbjct: 1127 gaactgcagcttcaacggcgtgtggaacggcggcggcggcgccggcatggccgacctcta 1186

               
Query: 363  cgt 365
            |||
Sbjct: 1187 cgt 1189



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 49  gagtacctcaaaggaaaagattacaacgtctacgttcacagctacttgca 98
           ||||| ||||| ||||||||||| ||| | || |||||||| ||||||||
Sbjct: 873 gagtatctcaagggaaaagattataacctttatgttcacagttacttgca 922



to top

>dbj|AK104429.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C10, full
            insert sequence
          Length = 1686

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                        
Query: 303  gaactgcaccttcaacggcgcgtggaacggcggcggcggccccggccaggccgagctcta 362
            |||||||| ||||||||||| ||||||||||||||||||| |||||  |||||| |||||
Sbjct: 1124 gaactgcagcttcaacggcgtgtggaacggcggcggcggcgccggcatggccgacctcta 1183

               
Query: 363  cgt 365
            |||
Sbjct: 1184 cgt 1186



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 49  gagtacctcaaaggaaaagattacaacgtctacgttcacagctacttgca 98
           ||||| ||||| ||||||||||| ||| | || |||||||| ||||||||
Sbjct: 870 gagtatctcaagggaaaagattataacctttatgttcacagttacttgca 919



to top

>dbj|AK104082.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C02, full
            insert sequence
          Length = 1686

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                        
Query: 303  gaactgcaccttcaacggcgcgtggaacggcggcggcggccccggccaggccgagctcta 362
            |||||||| ||||||||||| ||||||||||||||||||| |||||  |||||| |||||
Sbjct: 1124 gaactgcagcttcaacggcgtgtggaacggcggcggcggcgccggcatggccgacctcta 1183

               
Query: 363  cgt 365
            |||
Sbjct: 1184 cgt 1186



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 49  gagtacctcaaaggaaaagattacaacgtctacgttcacagctacttgca 98
           ||||| ||||| ||||||||||| ||| | || |||||||| ||||||||
Sbjct: 870 gagtatctcaagggaaaagattataacctttatgttcacagttacttgca 919



to top

>dbj|AK069955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036G10, full
            insert sequence
          Length = 1691

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                        
Query: 303  gaactgcaccttcaacggcgcgtggaacggcggcggcggccccggccaggccgagctcta 362
            |||||||| ||||||||||| ||||||||||||||||||| |||||  |||||| |||||
Sbjct: 1129 gaactgcagcttcaacggcgtgtggaacggcggcggcggcgccggcatggccgacctcta 1188

               
Query: 363  cgt 365
            |||
Sbjct: 1189 cgt 1191



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 49  gagtacctcaaaggaaaagattacaacgtctacgttcacagctacttgca 98
           ||||| ||||| ||||||||||| ||| | || |||||||| ||||||||
Sbjct: 875 gagtatctcaagggaaaagattataacctttatgttcacagttacttgca 924



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                           
Query: 299     ccaagaactgcaccttcaacggcgcgtggaacggcggcggcggccccggccaggccgagc 358
               |||| ||||||| ||||||||| | ||||||||||||||| ||| | || |||| |||||
Sbjct: 1132258 ccaacaactgcagcttcaacggagtgtggaacggcggcggtggcgctgggcaggacgagc 1132317

                                              
Query: 359     tctacgtcacctccagcttctactacatggc 389
               |||||||  |  |||| ||||||||||||||
Sbjct: 1132318 tctacgttgcgaccagtttctactacatggc 1132348



to top

>dbj|AK100760.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023119H05, full
           insert sequence
          Length = 1834

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                       
Query: 299 ccaagaactgcaccttcaacggcgcgtggaacggcggcggcggccccggccaggccgagc 358
           |||| ||||||| ||||||||| | ||||||||||||||| ||| | || |||| |||||
Sbjct: 792 ccaacaactgcagcttcaacggagtgtggaacggcggcggtggcgctgggcaggacgagc 851

                                          
Query: 359 tctacgtcacctccagcttctactacatggc 389
           |||||||  |  |||| ||||||||||||||
Sbjct: 852 tctacgttgcgaccagtttctactacatggc 882



to top

>dbj|AK059453.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-B11, full
           insert sequence
          Length = 735

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                       
Query: 299 ccaagaactgcaccttcaacggcgcgtggaacggcggcggcggccccggccaggccgagc 358
           |||| ||||||| ||||||||| | ||||||||||||||| ||| | || |||| |||||
Sbjct: 231 ccaacaactgcagcttcaacggagtgtggaacggcggcggtggcgctgggcaggacgagc 290

                                          
Query: 359 tctacgtcacctccagcttctactacatggc 389
           |||||||  |  |||| ||||||||||||||
Sbjct: 291 tctacgttgcgaccagtttctactacatggc 321



to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                           
Query: 299     ccaagaactgcaccttcaacggcgcgtggaacggcggcggcggccccggccaggccgagc 358
               |||| ||||||| ||||||||| | ||||||||||||||| ||| | || |||| |||||
Sbjct: 1132258 ccaacaactgcagcttcaacggagtgtggaacggcggcggtggcgctgggcaggacgagc 1132317

                                              
Query: 359     tctacgtcacctccagcttctactacatggc 389
               |||||||  |  |||| ||||||||||||||
Sbjct: 1132318 tctacgttgcgaccagtttctactacatggc 1132348



to top

>emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb0119L20 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 126974

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                         
Query: 299   ccaagaactgcaccttcaacggcgcgtggaacggcggcggcggccccggccaggccgagc 358
             |||| ||||||| ||||||||| | ||||||||||||||| ||| | || |||| |||||
Sbjct: 71241 ccaacaactgcagcttcaacggagtgtggaacggcggcggtggcgctgggcaggacgagc 71300

                                            
Query: 359   tctacgtcacctccagcttctactacatggc 389
             |||||||  |  |||| ||||||||||||||
Sbjct: 71301 tctacgttgcgaccagtttctactacatggc 71331



to top

>gb|BT018406.1| Zea mays clone EL01N0326A05.d mRNA sequence
          Length = 1460

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                       
Query: 137 ccaaaaacggaccagtcagctactgcgtgctgcgcggatacgatggcaaatacacctaca 196
           |||| ||||||||| |||||| |||| ||||||||||||    ||| ||||| |||||||
Sbjct: 614 ccaagaacggaccattcagctcctgcatgctgcgcggatttagtggtaaatatacctaca 673

               
Query: 197 acgg 200
           ||||
Sbjct: 674 acgg 677



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 70  tacaacgtctacgttcacagctacttgc 97
           ||||| || |||||||||||||||||||
Sbjct: 547 tacaatgtatacgttcacagctacttgc 574



to top

>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 562     tactccctgctcgtggacgggtt 584
               |||||||||||||||||||||||
Sbjct: 2443458 tactccctgctcgtggacgggtt 2443436



to top

>emb|AL354815.10| Human DNA sequence from clone RP11-760M1 on chromosome 13 Contains
             three novel genes, the 5' end of the TNFRSF19 gene for
             tumour necrosis factor receptor superfamily member 19 and
             two CpG islands, complete sequence
          Length = 168663

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 479   tgagcttcctggaggccaaggc 500
             ||||||||||||||||||||||
Sbjct: 53200 tgagcttcctggaggccaaggc 53221



to top

>gb|AC109815.5| Homo sapiens BAC clone CTD-2192H8 from 2, complete sequence
          Length = 165158

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 330   cggcggcggcggccccggccaggccg 355
             |||||||||||||||||||| |||||
Sbjct: 75703 cggcggcggcggccccggcccggccg 75678



to top

>gb|AC123886.7| Homo sapiens BAC clone RP11-404O21 from 2, complete sequence
          Length = 162447

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 330   cggcggcggcggccccggccaggccg 355
             |||||||||||||||||||| |||||
Sbjct: 42224 cggcggcggcggccccggcccggccg 42199



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   cggcggcggcggccccggcc 349
             ||||||||||||||||||||
Sbjct: 42352 cggcggcggcggccccggcc 42333



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   cggcggcggcggccccggcc 349
             ||||||||||||||||||||
Sbjct: 42288 cggcggcggcggccccggcc 42269



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   cggcggcggcggccccggcc 349
             ||||||||||||||||||||
Sbjct: 42181 cggcggcggcggccccggcc 42162



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   cggcggcggcggccccggcc 349
             ||||||||||||||||||||
Sbjct: 42116 cggcggcggcggccccggcc 42097



to top

>dbj|AK072692.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140I22, full
           insert sequence
          Length = 1706

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 49  gagtacctcaaaggaaaagattacaacgtctacgttcacagctacttgcactacggcg 106
           ||||| ||||| ||||||||||| ||| | || || |||||||| |||||||| ||||
Sbjct: 717 gagtatctcaagggaaaagattataacatttatgtgcacagctatttgcactatggcg 774



to top

>gb|AC151766.1| Ornithorhynchus anatinus chromosome UNK clone OABb-433A1, complete
             sequence
          Length = 161653

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 329   acggcggcggcggccccggcc 349
             |||||||||||||||||||||
Sbjct: 73274 acggcggcggcggccccggcc 73254



to top

>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 332    gcggcggcggccccggccagg 352
              |||||||||||||||||||||
Sbjct: 780421 gcggcggcggccccggccagg 780441



to top

>gb|AC079852.3| Oryza sativa chromosome 10 clone OSJNBa0034A02, complete sequence
          Length = 185904

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 324   gtggaacggcggcggcggccc 344
             |||||||||||||||||||||
Sbjct: 79592 gtggaacggcggcggcggccc 79572



to top

>gb|U82749.1|MAU82749 Mycobacterium avium glyceraldehyde-3-phosphate dehydrogenase homolog
            (gapdh) gene, complete cds; and phosphoglycerate kinase
            gene, partial cds
          Length = 2530

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 442  gcggcgttcagggccgccgccgagg 466
            |||||||||| ||||||||||||||
Sbjct: 1134 gcggcgttcaaggccgccgccgagg 1158



to top

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 324     gtggaacggcggcggcggccc 344
               |||||||||||||||||||||
Sbjct: 2576712 gtggaacggcggcggcggccc 2576692



to top

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 450     cagggccgccgccgaggagat 470
               |||||||||||||||||||||
Sbjct: 5509759 cagggccgccgccgaggagat 5509779



to top

>gb|AY111776.1| Zea mays CL39796_1 mRNA sequence
          Length = 952

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 301 aagaactgcaccttcaacggcgcgtggaacggcggcggcgg 341
           ||||||||||||||||| |||   ||||| |||||||||||
Sbjct: 811 aagaactgcaccttcaatggcatatggaatggcggcggcgg 771



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 531 gccctacatctgcatggaccttgtctaccagta 563
           ||||||| | ||||||||||||| |||||||||
Sbjct: 581 gccctacctgtgcatggaccttgcctaccagta 549



to top

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 324     gtggaacggcggcggcggccc 344
               |||||||||||||||||||||
Sbjct: 2576663 gtggaacggcggcggcggccc 2576643



to top

>gb|AC125180.6| Mus musculus BAC clone RP23-322K1 from chromosome 14, complete sequence
          Length = 200560

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 330    cggcggcggcggccccggcc 349
              ||||||||||||||||||||
Sbjct: 134888 cggcggcggcggccccggcc 134869



to top

>gb|AC164157.3| Mus musculus BAC clone RP24-297C1 from chromosome 6, complete sequence
          Length = 176868

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 330    cggcggcggcggccccggcc 349
              ||||||||||||||||||||
Sbjct: 152290 cggcggcggcggccccggcc 152309



to top

>gb|DQ215467.1| Taeniopygia guttata clone 0058P0010H07 MGC15397 variant 1-like
           mRNA, complete sequence
          Length = 1115

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 cggcggcggcggccccggcc 349
           ||||||||||||||||||||
Sbjct: 74  cggcggcggcggccccggcc 93



to top

>ref|NM_001030604.1| Gallus gallus SLIT-ROBO Rho GTPase activating protein 3 (SRGAP3),
            mRNA
          Length = 2858

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 409  gacagcgaggcgagcagcgg 428
            ||||||||||||||||||||
Sbjct: 2566 gacagcgaggcgagcagcgg 2585



to top

>ref|XM_469478.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2109

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 334  ggcggcggccccggccaggccgagctct 361
            |||||| || ||||||||||||||||||
Sbjct: 1753 ggcggcagctccggccaggccgagctct 1780



to top

>ref|NM_015209.1| Homo sapiens kazrin (KIAA1026), transcript variant A, mRNA
          Length = 1475

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 cggcggcggcggccccggcc 349
           ||||||||||||||||||||
Sbjct: 332 cggcggcggcggccccggcc 351



to top

>ref|XM_513047.1| PREDICTED: Pan troglodytes similar to KIAA1026 protein (LOC456454),
            mRNA
          Length = 2790

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 330  cggcggcggcggccccggcc 349
            ||||||||||||||||||||
Sbjct: 1077 cggcggcggcggccccggcc 1096



to top

>gb|BC050920.1| Mus musculus atrophin 1, mRNA (cDNA clone MGC:63230 IMAGE:6406687),
           complete cds
          Length = 4421

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 330 cggcggcggcggccccggcc 349
           ||||||||||||||||||||
Sbjct: 70  cggcggcggcggccccggcc 51



to top

>gb|AY505119.1| Homo sapiens kazrin isoform A mRNA, complete cds
          Length = 1475

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 cggcggcggcggccccggcc 349
           ||||||||||||||||||||
Sbjct: 332 cggcggcggcggccccggcc 351



to top

>ref|XM_882735.1| PREDICTED: Bos taurus hypothetical protein LOC617310 (LOC617310),
           mRNA
          Length = 641

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 330 cggcggcggcggccccggcc 349
           ||||||||||||||||||||
Sbjct: 245 cggcggcggcggccccggcc 226



to top

>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 275     tgagaatcagcgcgccatgc 294
               ||||||||||||||||||||
Sbjct: 4975152 tgagaatcagcgcgccatgc 4975133



to top

>ref|NM_007881.4| Mus musculus atrophin 1 (Atn1), mRNA
          Length = 4426

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 330 cggcggcggcggccccggcc 349
           ||||||||||||||||||||
Sbjct: 70  cggcggcggcggccccggcc 51



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 334      ggcggcggccccggccaggccgagctct 361
                |||||| || ||||||||||||||||||
Sbjct: 28219463 ggcggcagctccggccaggccgagctct 28219490



to top

>ref|XM_977723.1| PREDICTED: Mus musculus hypothetical protein LOC669002 (LOC669002),
           mRNA
          Length = 915

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 cggcggcggcggccccggcc 349
           ||||||||||||||||||||
Sbjct: 247 cggcggcggcggccccggcc 266



to top

>ref|XM_989737.1| PREDICTED: Mus musculus hypothetical protein LOC667319 (LOC667319),
           mRNA
          Length = 915

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 cggcggcggcggccccggcc 349
           ||||||||||||||||||||
Sbjct: 247 cggcggcggcggccccggcc 266



to top

>ref|XM_001003232.1| PREDICTED: Mus musculus hypothetical protein LOC677407 (LOC677407),
           mRNA
          Length = 915

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 cggcggcggcggccccggcc 349
           ||||||||||||||||||||
Sbjct: 247 cggcggcggcggccccggcc 266



to top

>ref|XM_542202.2| PREDICTED: Canis familiaris similar to adenomatosis polyposis coli 2
            (LOC485084), mRNA
          Length = 7620

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 330  cggcggcggcggccccggcc 349
            ||||||||||||||||||||
Sbjct: 4734 cggcggcggcggccccggcc 4753



to top

>ref|XM_533529.2| PREDICTED: Canis familiaris similar to SMC5 protein, transcript
           variant 1 (LOC476327), mRNA
          Length = 3354

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 330 cggcggcggcggccccggccaggccgagctct 361
           ||||||||||||| |||||  |||||||||||
Sbjct: 129 cggcggcggcggcgccggcggggccgagctct 98



to top

>ref|XM_844186.1| PREDICTED: Canis familiaris similar to Growth-arrest-specific
           protein 1 precursor (GAS-1) (LOC607496), mRNA
          Length = 1032

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 330 cggcggcggcggccccggcc 349
           ||||||||||||||||||||
Sbjct: 277 cggcggcggcggccccggcc 258



to top

>ref|NM_017228.1| Rattus norvegicus atrophin 1 (Atn1), mRNA
          Length = 4387

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 330 cggcggcggcggccccggcc 349
           ||||||||||||||||||||
Sbjct: 61  cggcggcggcggccccggcc 42



to top

>emb|AL391597.15| Human DNA sequence from clone RP11-357P18 on chromosome 1 Contains the
             3' end of the DAF gene for decay accelerating factor for
             complement (CD55, Cromer blood group system) and the 5'
             end of CR2 gene for complement component (3d/Epstein Barr
             virus) receptor 2, complete sequence
          Length = 141124

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    aagagtacctcaaaggaaaa 66
             ||||||||||||||||||||
Sbjct: 82012 aagagtacctcaaaggaaaa 81993



to top

>emb|AL034395.6|HS243L18 Human DNA sequence from clone RP1-243L18 on chromosome 1p36.11-36.23
             Contains the 5' end of a novel gene (KIAA1026) and a CpG
             island, complete sequence
          Length = 110654

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   cggcggcggcggccccggcc 349
             ||||||||||||||||||||
Sbjct: 91789 cggcggcggcggccccggcc 91770



to top

>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 195     caacggggagcaatacgacg 214
               ||||||||||||||||||||
Sbjct: 4221121 caacggggagcaatacgacg 4221140



to top

>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16
          Length = 349746

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 436   acgccggcggcgttcagggc 455
             ||||||||||||||||||||
Sbjct: 41392 acgccggcggcgttcagggc 41411



to top

>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29
          Length = 339650

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 329    acggcggcggcggccccggc 348
              ||||||||||||||||||||
Sbjct: 253122 acggcggcggcggccccggc 253103



to top

>emb|AJ719759.1| Gallus gallus mRNA for hypothetical protein, clone 6c21
          Length = 2858

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 409  gacagcgaggcgagcagcgg 428
            ||||||||||||||||||||
Sbjct: 2566 gacagcgaggcgagcagcgg 2585



to top

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   ccggccaggccgagctctac 363
             ||||||||||||||||||||
Sbjct: 75378 ccggccaggccgagctctac 75359



to top

>gb|AC183275.3| Pan troglodytes BAC clone CH251-16D10 from chromosome 2, complete
             sequence
          Length = 180877

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   cggcggcggcggccccggcc 349
             ||||||||||||||||||||
Sbjct: 94155 cggcggcggcggccccggcc 94136



to top

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 336    cggcggccccggccaggccgagct 359
              ||||||||||||||||||| ||||
Sbjct: 389516 cggcggccccggccaggccaagct 389493



to top

>dbj|AB028949.1| Homo sapiens mRNA for KIAA1026 protein, partial cds
          Length = 5592

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 cggcggcggcggccccggcc 349
           ||||||||||||||||||||
Sbjct: 417 cggcggcggcggccccggcc 436



to top

>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 329     acggcggcggcggccccggc 348
               ||||||||||||||||||||
Sbjct: 3333768 acggcggcggcggccccggc 3333787



to top

>gb|U31777.1|RNU31777 Rattus norvegicus atrophin-1 (DRPLA) mRNA, complete cds
          Length = 4387

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 330 cggcggcggcggccccggcc 349
           ||||||||||||||||||||
Sbjct: 61  cggcggcggcggccccggcc 42



to top

>gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genomic sequence, complete
             sequence
          Length = 122497

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 334   ggcggcggccccggccaggccgagctct 361
             |||||| || ||||||||||||||||||
Sbjct: 70604 ggcggcagctccggccaggccgagctct 70631



to top

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 329     acggcggcggcggccccggc 348
               ||||||||||||||||||||
Sbjct: 3511400 acggcggcggcggccccggc 3511381



to top

>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V,
              complete sequence
          Length = 1519138

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 330    cggcggcggcggccccggccaggccgag 357
              ||||||||||| | ||||||||||||||
Sbjct: 698744 cggcggcggcgtcaccggccaggccgag 698771



to top

>gb|AF298154.1|AF298154 Arcanobacterium pyogenes BirA (birA) gene, partial cds; and
            neuraminidase NanH (nanH) gene, complete cds
          Length = 4802

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 314  tcaacggcgcgtggaacggcggcg 337
            |||||||||||||| |||||||||
Sbjct: 1984 tcaacggcgcgtggcacggcggcg 2007



to top

>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 329     acggcggcggcggccccggc 348
               ||||||||||||||||||||
Sbjct: 2008955 acggcggcggcggccccggc 2008974



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 334      ggcggcggccccggccaggccgagctct 361
                |||||| || ||||||||||||||||||
Sbjct: 28310787 ggcggcagctccggccaggccgagctct 28310814



to top

>gb|AC022210.8| Homo sapiens BAC clone RP11-617F9 from 2, complete sequence
          Length = 164846

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 330   cggcggcggcggccccggccaggccgag 357
             |||||||||||||  |||||||||||||
Sbjct: 86053 cggcggcggcggcggcggccaggccgag 86080



to top

>gb|AF271693.1|AF271693 Mycobacteriophage Bxb1, complete sequence
          Length = 50550

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 452   gggccgccgccgaggagatctgcccgat 479
             |||| |||||||||||||||||| ||||
Sbjct: 24802 gggcagccgccgaggagatctgctcgat 24775



to top

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 419     cgagcagcgggaagaccacg 438
               ||||||||||||||||||||
Sbjct: 2260764 cgagcagcgggaagaccacg 2260783



to top

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 330     cggcggcggcggccccggccaggc 353
               |||||||||||||| |||||||||
Sbjct: 1449210 cggcggcggcggcctcggccaggc 1449233



to top

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 396     cgtcggcctgatcgacagcg 415
               ||||||||||||||||||||
Sbjct: 3237174 cgtcggcctgatcgacagcg 3237155



to top

>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 333    cggcggcggccccggccagg 352
              ||||||||||||||||||||
Sbjct: 774402 cggcggcggccccggccagg 774421



to top

>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 195     caacggggagcaatacgacg 214
               ||||||||||||||||||||
Sbjct: 4315185 caacggggagcaatacgacg 4315204



to top

>ref|NM_210247.1| Eremothecium gossypii AER033Wp (AER033W), mRNA
          Length = 840

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 330 cggcggcggcggccccggccaggccgag 357
           ||||||||||| | ||||||||||||||
Sbjct: 651 cggcggcggcgtcaccggccaggccgag 678



to top

>gb|BT023990.1| Zea mays clone EL01N0412C01 mRNA sequence
          Length = 1802

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 cggcggcggcggccccggcc 349
           ||||||||||||||||||||
Sbjct: 24  cggcggcggcggccccggcc 43



to top

>gb|BC036877.1| Homo sapiens cDNA clone IMAGE:5242289, partial cds
          Length = 2697

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 330  cggcggcggcggccccggcc 349
            ||||||||||||||||||||
Sbjct: 2294 cggcggcggcggccccggcc 2275



to top

>gb|AY781175.1| Oryza sativa (indica cultivar-group) gibberellic acid-insensitive
            (GAI) gene, promoter region and complete cds
          Length = 3494

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 334  ggcggcggccccggccaggccgagctct 361
            |||||| || ||||||||||||||||||
Sbjct: 3025 ggcggcagctccggccaggccgagctct 3052



to top

>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 329    acggcggcggcggccccggc 348
              ||||||||||||||||||||
Sbjct: 223562 acggcggcggcggccccggc 223581



to top

>gb|AC002397.1|AC002397 Mouse chromosome 6 BAC-284H12 (Research Genetics mouse BAC library)
              complete sequence
          Length = 227538

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 330    cggcggcggcggccccggcc 349
              ||||||||||||||||||||
Sbjct: 141392 cggcggcggcggccccggcc 141373



to top

>gb|AY500153.1| Mycobacteriophage Bethlehem, complete genome
          Length = 52250

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 452   gggccgccgccgaggagatctgcccgat 479
             |||| |||||||||||||||||| ||||
Sbjct: 25994 gggcagccgccgaggagatctgctcgat 25967



to top

>gb|AY500152.1| Mycobacteriophage U2, complete genome
          Length = 51277

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 452   gggccgccgccgaggagatctgcccgat 479
             |||| |||||||||||||||||| ||||
Sbjct: 24856 gggcagccgccgaggagatctgctcgat 24829



to top

>dbj|AB030956.1| Oryza sativa (japonica cultivar-group) mRNA for OsGAI, complete cds
          Length = 2500

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 334  ggcggcggccccggccaggccgagctct 361
            |||||| || ||||||||||||||||||
Sbjct: 1737 ggcggcagctccggccaggccgagctct 1764


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,589,245
Number of Sequences: 3902068
Number of extensions: 4589245
Number of successful extensions: 112978
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109748
Number of HSP's gapped (non-prelim): 3229
length of query: 598
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 575
effective length of database: 17,143,297,704
effective search space: 9857396179800
effective search space used: 9857396179800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top