ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags19n07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY111812.1| Zea mays CL5254_1 mRNA sequence 285 9e-74
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 145 2e-31
3gb|AC132214.1| Genomic sequence for Oryza sativa, Nipponbare str... 145 2e-31
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
5gb|AC105928.2| Oryza sativa (japonica cultivar-group) chromosome... 145 2e-31
6gb|AC133534.2| Homo sapiens BAC clone RP11-722P9 from 2, complet... 50 0.009
7gb|AC006512.13| Homo sapiens 12 PAC RP3-461F17 (Roswell Park Can... 44 0.56
8gb|U47924.1|HSU47924 Human chromosome 12p13 sequence, complete s... 44 0.56
9gb|AC139156.3| Mus musculus BAC clone RP24-115J20 from chromosom... 42 2.2
10gb|AC131796.2| Mus musculus BAC clone RP24-493L24 from chromosom... 42 2.2
11emb|AL031664.1|HS531H16 Human DNA sequence from clone RP4-531H16... 42 2.2
12gb|AC010083.5|AC010083 Homo sapiens BAC clone RP11-125L14 from 2... 42 2.2
13gb|AC090963.32| Mus musculus strain C57BL/6J chromosome 17 clone... 42 2.2
14emb|CT025857.10| Mouse DNA sequence from clone RP24-315F22 on ch... 42 2.2
15gb|AC151795.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 40 8.7
16gb|AC123060.4| Mus musculus chromosome 6 clone RP23-214M22, comp... 40 8.7
17gb|AC122011.3| Mus musculus chromosome 10 clone RP24-352E6, comp... 40 8.7
18ref|XM_365649.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 8.7
19gb|AC129336.4| Mus musculus BAC clone RP23-113I7 from chromosome... 40 8.7
20emb|CT009723.4| Mouse DNA sequence from clone RP23-12L5 on chrom... 40 8.7
21gb|AC129317.3| Mus musculus BAC clone RP23-443L14 from chromosom... 40 8.7
22gb|AC122876.4| Mus musculus BAC clone RP23-113K14 from 3, comple... 40 8.7
23gb|AC084389.1| Mus musculus BAC clone RP23-247A1 from 1, complet... 40 8.7
24gb|AC114816.4| Homo sapiens BAC clone RP11-1394O16 from 7, compl... 40 8.7
25emb|AL512284.20| Human DNA sequence from clone RP11-248M22 on ch... 40 8.7
26emb|CR385081.7| Zebrafish DNA sequence from clone CH211-59O9 in ... 40 8.7
27gb|AC173999.3| Pan troglodytes BAC clone CH251-530E14 from chrom... 40 8.7
28gb|AC068989.36| Homo sapiens 4 BAC RP11-662D13 (Roswell Park Can... 40 8.7
29gb|AC093888.2| Homo sapiens BAC clone RP11-671A4 from 4, complet... 40 8.7
30gb|AC079920.6| Homo sapiens BAC clone RP11-325K1 from 7, complet... 40 8.7
31gb|DP000035.1| Oryctolagus cuniculus target 116 genomic scaffold 40 8.7
32gb|AC008264.10|AC008264 Homo sapiens chromosome 7 clone RP11-180... 40 8.7
33gb|AC127686.4| Mus musculus BAC clone RP24-188G23 from 3, comple... 40 8.7
34gb|AE015450.1| Mycoplasma gallisepticum strain R complete genome 40 8.7 
>gb|AY111812.1| Zea mays CL5254_1 mRNA sequence
          Length = 740

 Score =  285 bits (144), Expect = 9e-74
 Identities = 294/344 (85%)
 Strand = Plus / Plus

                                                                       
Query: 154 tctggcagctgcagaagcttgtggtgaactactgcgactggggagggagcagcaggggaa 213
           |||||||||| |||||||| ||||| |||||||||||||||||||||||||||||    |
Sbjct: 94  tctggcagctccagaagctcgtggtaaactactgcgactggggagggagcagcagtttca 153

                                                                       
Query: 214 tcagggcttttatggagtcacatcttccagctttaaaggaaaagaatccccagttagagg 273
           |||| || || |||||| ||||||||||||| || |||||||||||||| || |||||||
Sbjct: 154 tcagagccttcatggaggcacatcttccagcgtttaaggaaaagaatccacacttagagg 213

                                                                       
Query: 274 tagtgacacagcttgtccgtggtcagcatcctaacttgaagggcgtttacaaaaaccata 333
           | |||||| |||||||||| ||||| ||||||||||| |||||  ||||||| |||||||
Sbjct: 214 tggtgacagagcttgtccgcggtcaacatcctaacttaaagggaatttacaagaaccata 273

                                                                       
Query: 334 acgagagagtggtttgtgtcagaaatttagcacccgaggacatcatgttgcaggccagta 393
           ||||| ||||||| ||||| ||||||||| | || ||||| ||  |  |||| ||||  |
Sbjct: 274 acgagcgagtggtatgtgtgagaaatttaccgccagaggaaatactcctgcaagccacca 333

                                                                       
Query: 394 ggctaaggtgttctctgggcaggaaagtggtgaagctgagaacgagacacgtgacgaaac 453
           ||||||||   ||||||||||||||||||||||||||| | || ||||| || |||||||
Sbjct: 334 ggctaaggaactctctgggcaggaaagtggtgaagctgcggaccagacatgtaacgaaac 393

                                                       
Query: 454 ggcctagtgtccaggggacatggacgacggagctgaagatgtga 497
           | || ||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 394 gccccagtgttcaggggacgtggacgacggaactgaagatgtga 437
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  145 bits (73), Expect = 2e-31
 Identities = 148/173 (85%)
 Strand = Plus / Minus

                                                                           
Query: 325     aaaaccataacgagagagtggtttgtgtcagaaatttagcacccgaggacatcatgttgc 384
               |||| ||||| ||| |||| ||||||||| |||||||||| |||||||||||  | ||||
Sbjct: 5582044 aaaatcataatgagcgagttgtttgtgtccgaaatttagcgcccgaggacatactattgc 5581985

                                                                           
Query: 385     aggccagtaggctaaggtgttctctgggcaggaaagtggtgaagctgagaacgagacacg 444
               | || |  |||||||||  ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5581984 aagctaccaggctaaggaattctctgggcaggaaagtggtgaagctgagaaccagacacg 5581925

                                                                    
Query: 445     tgacgaaacggcctagtgtccaggggacatggacgacggagctgaagatgtga 497
               | || || || || ||||| ||||| ||||||||||| || ||||||||||||
Sbjct: 5581924 taacaaagcgccccagtgttcagggaacatggacgacagaactgaagatgtga 5581872



 Score =  131 bits (66), Expect = 3e-27
 Identities = 78/82 (95%)
 Strand = Plus / Minus

                                                                           
Query: 137     gatggcgctgaggggcgtctggcagctgcagaagcttgtggtgaactactgcgactgggg 196
               |||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 5583509 gatggcgctgaggggcgtttggcagctgcagaagctcgtggtgaactactgcgattgggg 5583450

                                     
Query: 197     agggagcagcaggggaatcagg 218
               ||||||||||||||| ||||||
Sbjct: 5583449 agggagcagcagggggatcagg 5583428



 Score =  123 bits (62), Expect = 8e-25
 Identities = 98/110 (89%)
 Strand = Plus / Minus

                                                                           
Query: 215     cagggcttttatggagtcacatcttccagctttaaaggaaaagaatccccagttagaggt 274
               |||||||||||||||| | |||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 5582850 cagggcttttatggaggcgcatcttccagcttttaaggaaaagaacccccacttagaggt 5582791

                                                                 
Query: 275     agtgacacagcttgtccgtggtcagcatcctaacttgaagggcgtttaca 324
                |||||| || | |||||||| |||||||||||| |||||||| ||||||
Sbjct: 5582790 ggtgacagagttagtccgtggacagcatcctaacctgaagggcatttaca 5582741
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>gb|AC132214.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0040M05, from chromosome 3, complete sequence
          Length = 153126

 Score =  145 bits (73), Expect = 2e-31
 Identities = 148/173 (85%)
 Strand = Plus / Minus

                                                                          
Query: 325    aaaaccataacgagagagtggtttgtgtcagaaatttagcacccgaggacatcatgttgc 384
              |||| ||||| ||| |||| ||||||||| |||||||||| |||||||||||  | ||||
Sbjct: 125576 aaaatcataatgagcgagttgtttgtgtccgaaatttagcgcccgaggacatactattgc 125517

                                                                          
Query: 385    aggccagtaggctaaggtgttctctgggcaggaaagtggtgaagctgagaacgagacacg 444
              | || |  |||||||||  ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 125516 aagctaccaggctaaggaattctctgggcaggaaagtggtgaagctgagaaccagacacg 125457

                                                                   
Query: 445    tgacgaaacggcctagtgtccaggggacatggacgacggagctgaagatgtga 497
              | || || || || ||||| ||||| ||||||||||| || ||||||||||||
Sbjct: 125456 taacaaagcgccccagtgttcagggaacatggacgacagaactgaagatgtga 125404



 Score =  131 bits (66), Expect = 3e-27
 Identities = 78/82 (95%)
 Strand = Plus / Minus

                                                                          
Query: 137    gatggcgctgaggggcgtctggcagctgcagaagcttgtggtgaactactgcgactgggg 196
              |||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 127041 gatggcgctgaggggcgtttggcagctgcagaagctcgtggtgaactactgcgattgggg 126982

                                    
Query: 197    agggagcagcaggggaatcagg 218
              ||||||||||||||| ||||||
Sbjct: 126981 agggagcagcagggggatcagg 126960



 Score =  123 bits (62), Expect = 8e-25
 Identities = 98/110 (89%)
 Strand = Plus / Minus

                                                                          
Query: 215    cagggcttttatggagtcacatcttccagctttaaaggaaaagaatccccagttagaggt 274
              |||||||||||||||| | |||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 126382 cagggcttttatggaggcgcatcttccagcttttaaggaaaagaacccccacttagaggt 126323

                                                                
Query: 275    agtgacacagcttgtccgtggtcagcatcctaacttgaagggcgtttaca 324
               |||||| || | |||||||| |||||||||||| |||||||| ||||||
Sbjct: 126322 ggtgacagagttagtccgtggacagcatcctaacctgaagggcatttaca 126273
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  145 bits (73), Expect = 2e-31
 Identities = 148/173 (85%)
 Strand = Plus / Minus

                                                                           
Query: 325     aaaaccataacgagagagtggtttgtgtcagaaatttagcacccgaggacatcatgttgc 384
               |||| ||||| ||| |||| ||||||||| |||||||||| |||||||||||  | ||||
Sbjct: 5581259 aaaatcataatgagcgagttgtttgtgtccgaaatttagcgcccgaggacatactattgc 5581200

                                                                           
Query: 385     aggccagtaggctaaggtgttctctgggcaggaaagtggtgaagctgagaacgagacacg 444
               | || |  |||||||||  ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5581199 aagctaccaggctaaggaattctctgggcaggaaagtggtgaagctgagaaccagacacg 5581140

                                                                    
Query: 445     tgacgaaacggcctagtgtccaggggacatggacgacggagctgaagatgtga 497
               | || || || || ||||| ||||| ||||||||||| || ||||||||||||
Sbjct: 5581139 taacaaagcgccccagtgttcagggaacatggacgacagaactgaagatgtga 5581087



 Score =  131 bits (66), Expect = 3e-27
 Identities = 78/82 (95%)
 Strand = Plus / Minus

                                                                           
Query: 137     gatggcgctgaggggcgtctggcagctgcagaagcttgtggtgaactactgcgactgggg 196
               |||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 5582724 gatggcgctgaggggcgtttggcagctgcagaagctcgtggtgaactactgcgattgggg 5582665

                                     
Query: 197     agggagcagcaggggaatcagg 218
               ||||||||||||||| ||||||
Sbjct: 5582664 agggagcagcagggggatcagg 5582643



 Score =  123 bits (62), Expect = 8e-25
 Identities = 98/110 (89%)
 Strand = Plus / Minus

                                                                           
Query: 215     cagggcttttatggagtcacatcttccagctttaaaggaaaagaatccccagttagaggt 274
               |||||||||||||||| | |||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 5582065 cagggcttttatggaggcgcatcttccagcttttaaggaaaagaacccccacttagaggt 5582006

                                                                 
Query: 275     agtgacacagcttgtccgtggtcagcatcctaacttgaagggcgtttaca 324
                |||||| || | |||||||| |||||||||||| |||||||| ||||||
Sbjct: 5582005 ggtgacagagttagtccgtggacagcatcctaacctgaagggcatttaca 5581956
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>gb|AC105928.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0014O06, complete sequence
          Length = 168031

 Score =  145 bits (73), Expect = 2e-31
 Identities = 148/173 (85%)
 Strand = Plus / Minus

                                                                         
Query: 325   aaaaccataacgagagagtggtttgtgtcagaaatttagcacccgaggacatcatgttgc 384
             |||| ||||| ||| |||| ||||||||| |||||||||| |||||||||||  | ||||
Sbjct: 45743 aaaatcataatgagcgagttgtttgtgtccgaaatttagcgcccgaggacatactattgc 45684

                                                                         
Query: 385   aggccagtaggctaaggtgttctctgggcaggaaagtggtgaagctgagaacgagacacg 444
             | || |  |||||||||  ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 45683 aagctaccaggctaaggaattctctgggcaggaaagtggtgaagctgagaaccagacacg 45624

                                                                  
Query: 445   tgacgaaacggcctagtgtccaggggacatggacgacggagctgaagatgtga 497
             | || || || || ||||| ||||| ||||||||||| || ||||||||||||
Sbjct: 45623 taacaaagcgccccagtgttcagggaacatggacgacagaactgaagatgtga 45571



 Score =  131 bits (66), Expect = 3e-27
 Identities = 78/82 (95%)
 Strand = Plus / Minus

                                                                         
Query: 137   gatggcgctgaggggcgtctggcagctgcagaagcttgtggtgaactactgcgactgggg 196
             |||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 47208 gatggcgctgaggggcgtttggcagctgcagaagctcgtggtgaactactgcgattgggg 47149

                                   
Query: 197   agggagcagcaggggaatcagg 218
             ||||||||||||||| ||||||
Sbjct: 47148 agggagcagcagggggatcagg 47127



 Score =  123 bits (62), Expect = 8e-25
 Identities = 98/110 (89%)
 Strand = Plus / Minus

                                                                         
Query: 215   cagggcttttatggagtcacatcttccagctttaaaggaaaagaatccccagttagaggt 274
             |||||||||||||||| | |||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 46549 cagggcttttatggaggcgcatcttccagcttttaaggaaaagaacccccacttagaggt 46490

                                                               
Query: 275   agtgacacagcttgtccgtggtcagcatcctaacttgaagggcgtttaca 324
              |||||| || | |||||||| |||||||||||| |||||||| ||||||
Sbjct: 46489 ggtgacagagttagtccgtggacagcatcctaacctgaagggcatttaca 46440
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>gb|AC133534.2| Homo sapiens BAC clone RP11-722P9 from 2, complete sequence
          Length = 24868

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 71    cttctcccacatttcctcctcccca 95
             |||||||||||||||||||||||||
Sbjct: 12702 cttctcccacatttcctcctcccca 12726
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>gb|AC006512.13| Homo sapiens 12 PAC RP3-461F17 (Roswell Park Cancer Institute Human PAC
             Library) complete sequence
          Length = 155975

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 83    ttcctcctccccacccacgcac 104
             ||||||||||||||||||||||
Sbjct: 53499 ttcctcctccccacccacgcac 53478
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>gb|U47924.1|HSU47924 Human chromosome 12p13 sequence, complete sequence
          Length = 222930

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 83     ttcctcctccccacccacgcac 104
              ||||||||||||||||||||||
Sbjct: 181078 ttcctcctccccacccacgcac 181057
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>gb|AC139156.3| Mus musculus BAC clone RP24-115J20 from chromosome 18, complete sequence
          Length = 175062

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 60     ccatcccctcccttctcccac 80
              |||||||||||||||||||||
Sbjct: 107425 ccatcccctcccttctcccac 107405
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>gb|AC131796.2| Mus musculus BAC clone RP24-493L24 from chromosome 18, complete
             sequence
          Length = 130790

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 60    ccatcccctcccttctcccac 80
             |||||||||||||||||||||
Sbjct: 91397 ccatcccctcccttctcccac 91417
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>emb|AL031664.1|HS531H16 Human DNA sequence from clone RP4-531H16 on chromosome 20p11.22-12
              Contains the 3' end of the PCSK2 gene for proprotein
              convertase subtilisin/kexin type 2, the BFSP1 gene for
              beaded filament structural protein 1 (filensin), the TCTE1P
              gene for t-complex-associated-testis-expressed 1
              pseudogene, the  RPS27AP2 gene for ribosomal protein S27a
              pseudogene 2 and a CpG island, complete sequence
          Length = 155116

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 80     catttcctcctccccacccac 100
              |||||||||||||||||||||
Sbjct: 114899 catttcctcctccccacccac 114879
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>gb|AC010083.5|AC010083 Homo sapiens BAC clone RP11-125L14 from 2, complete sequence
          Length = 200936

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 80    catttcctcctccccacccac 100
             |||||||||||||||||||||
Sbjct: 32778 catttcctcctccccacccac 32798
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>gb|AC090963.32| Mus musculus strain C57BL/6J chromosome 17 clone rp23-435j12,
            complete sequence
          Length = 218107

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 288  gtccgtggtcagcatcctaac 308
            |||||||||||||||||||||
Sbjct: 2208 gtccgtggtcagcatcctaac 2228
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>emb|CT025857.10| Mouse DNA sequence from clone RP24-315F22 on chromosome 14, complete
             sequence
          Length = 107710

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 240   ccagctttaaaggaaaagaat 260
             |||||||||||||||||||||
Sbjct: 30422 ccagctttaaaggaaaagaat 30442
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>gb|AC151795.1| Ornithorhynchus anatinus chromosome UNK clone OABb-95A1, complete
             sequence
          Length = 106226

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 412   gcaggaaagtggtgaagctg 431
             ||||||||||||||||||||
Sbjct: 42215 gcaggaaagtggtgaagctg 42196
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>gb|AC123060.4| Mus musculus chromosome 6 clone RP23-214M22, complete sequence
          Length = 210248

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 194   gggagggagcagcaggggaatcag 217
             |||||| |||||||||||||||||
Sbjct: 67348 gggaggtagcagcaggggaatcag 67325
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>gb|AC122011.3| Mus musculus chromosome 10 clone RP24-352E6, complete sequence
          Length = 181468

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    tcccacatttcctcctcccc 94
             ||||||||||||||||||||
Sbjct: 94306 tcccacatttcctcctcccc 94287
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>ref|XM_365649.1| Magnaporthe grisea 70-15 hypothetical protein (MG02351.4) partial
            mRNA
          Length = 16035

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 160  agctgcagaagcttgtggtg 179
            ||||||||||||||||||||
Sbjct: 8331 agctgcagaagcttgtggtg 8350
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>gb|AC129336.4| Mus musculus BAC clone RP23-113I7 from chromosome 10, complete
            sequence
          Length = 215437

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   tcccacatttcctcctcccc 94
            ||||||||||||||||||||
Sbjct: 2562 tcccacatttcctcctcccc 2543
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>emb|CT009723.4| Mouse DNA sequence from clone RP23-12L5 on chromosome 9, complete
              sequence
          Length = 210030

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 242    agctttaaaggaaaagaatc 261
              ||||||||||||||||||||
Sbjct: 176887 agctttaaaggaaaagaatc 176906
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>gb|AC129317.3| Mus musculus BAC clone RP23-443L14 from chromosome 9, complete sequence
          Length = 210950

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   agctttaaaggaaaagaatc 261
             ||||||||||||||||||||
Sbjct: 55859 agctttaaaggaaaagaatc 55840
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>gb|AC122876.4| Mus musculus BAC clone RP23-113K14 from 3, complete sequence
          Length = 190123

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    catcccctcccttctcccac 80
             ||||||||||||||||||||
Sbjct: 83904 catcccctcccttctcccac 83923
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>gb|AC084389.1| Mus musculus BAC clone RP23-247A1 from 1, complete sequence
          Length = 206497

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 393  aggctaaggtgttctctgggcaggaaag 420
            ||||| |||||||||||| |||||||||
Sbjct: 5133 aggctgaggtgttctctgagcaggaaag 5106
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>gb|AC114816.4| Homo sapiens BAC clone RP11-1394O16 from 7, complete sequence
          Length = 15862

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 86    ctcctccccacccacgcacttgct 109
             ||||||||||||||| ||||||||
Sbjct: 11840 ctcctccccacccacccacttgct 11817
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>emb|AL512284.20| Human DNA sequence from clone RP11-248M22 on chromosome 10 Contains
             part of the gene for CamKI-like protein kinase (CKLiK)
             (LOC221042 LOC283070) and two CpG islands, complete
             sequence
          Length = 113920

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   ggggcgtctggcagctgcag 167
             ||||||||||||||||||||
Sbjct: 43020 ggggcgtctggcagctgcag 43001
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>emb|CR385081.7| Zebrafish DNA sequence from clone CH211-59O9 in linkage group 25,
             complete sequence
          Length = 182806

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 499   tcaaagttccaagacagact 518
             ||||||||||||||||||||
Sbjct: 19130 tcaaagttccaagacagact 19149
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>gb|AC173999.3| Pan troglodytes BAC clone CH251-530E14 from chromosome 7, complete
              sequence
          Length = 166256

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 86     ctcctccccacccacgcacttgct 109
              ||||||||||||||| ||||||||
Sbjct: 156562 ctcctccccacccacccacttgct 156585
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>gb|AC068989.36| Homo sapiens 4 BAC RP11-662D13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 197484

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 565   tgctgctattagacctacct 584
             ||||||||||||||||||||
Sbjct: 31939 tgctgctattagacctacct 31920
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>gb|AC093888.2| Homo sapiens BAC clone RP11-671A4 from 4, complete sequence
          Length = 103735

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 565   tgctgctattagacctacct 584
             ||||||||||||||||||||
Sbjct: 20964 tgctgctattagacctacct 20983
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>gb|AC079920.6| Homo sapiens BAC clone RP11-325K1 from 7, complete sequence
          Length = 130284

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 86     ctcctccccacccacgcacttgct 109
              ||||||||||||||| ||||||||
Sbjct: 115797 ctcctccccacccacccacttgct 115820
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>gb|DP000035.1| Oryctolagus cuniculus target 116 genomic scaffold
          Length = 434755

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     ccacatttcctcctccccac 96
              ||||||||||||||||||||
Sbjct: 173400 ccacatttcctcctccccac 173419
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>gb|AC008264.10|AC008264 Homo sapiens chromosome 7 clone RP11-180C16, complete sequence
          Length = 162694

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   ctggggagggagcagcaggg 210
             ||||||||||||||||||||
Sbjct: 54075 ctggggagggagcagcaggg 54094
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>gb|AC127686.4| Mus musculus BAC clone RP24-188G23 from 3, complete sequence
          Length = 173474

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     ctcccacatttcctcctccc 93
              ||||||||||||||||||||
Sbjct: 103019 ctcccacatttcctcctccc 103038
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>gb|AE015450.1| Mycoplasma gallisepticum strain R complete genome
          Length = 996422

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 310    tgaagggcgtttacaaaaac 329
              ||||||||||||||||||||
Sbjct: 437613 tgaagggcgtttacaaaaac 437632


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,279,394
Number of Sequences: 3902068
Number of extensions: 5279394
Number of successful extensions: 110478
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110319
Number of HSP's gapped (non-prelim): 153
length of query: 637
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 614
effective length of database: 17,143,297,704
effective search space: 10525984790256
effective search space used: 10525984790256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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