ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags19n03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 1255 bits (633), Expect = 0.0 Identities = 640/641 (99%), Gaps = 1/641 (0%) Strand = Plus / Minus Query: 1 ctgaaaacgcc-gtcgggagtgcatcatgagtatcctgacccggtggttgcttatcccgc 59 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3693285 ctgaaaacgccagtcgggagtgcatcatgagtatcctgacccggtggttgcttatcccgc 3693226 Query: 60 cggtcaacgcgcggcttatcgggcgttatcgcgattatcgtcgtcacggtgcgtcggctt 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3693225 cggtcaacgcgcggcttatcgggcgttatcgcgattatcgtcgtcacggtgcgtcggctt 3693166 Query: 120 tcagcgcgacgctcggctgtttctggatgatcctggcctggatttttattccgctggagc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3693165 tcagcgcgacgctcggctgtttctggatgatcctggcctggatttttattccgctggagc 3693106 Query: 180 acccgcgctggcagcgtattcgcgcagaacataaaaacctgtatccgcatatcaacgcct 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3693105 acccgcgctggcagcgtattcgcgcagaacataaaaacctgtatccgcatatcaacgcct 3693046 Query: 240 cgcgtccgcgtccgctggacccggtccgttatctcattcaaacatgctggttattgatcg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3693045 cgcgtccgcgtccgctggacccggtccgttatctcattcaaacatgctggttattgatcg 3692986 Query: 300 gtgcatcgcgcaaagaaacgccgaaaccgcgcaggcgggcattttcaggtctgcaaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3692985 gtgcatcgcgcaaagaaacgccgaaaccgcgcaggcgggcattttcaggtctgcaaaata 3692926 Query: 360 ttcgtggacgttaccatcaatggatgaacgagctgcctgagcgcgttagccataaaacac 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3692925 ttcgtggacgttaccatcaatggatgaacgagctgcctgagcgcgttagccataaaacac 3692866 Query: 420 agcatctggatgagaaaaaagagctcggtcatttgagtgccggggcgcggcggttgatcc 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3692865 agcatctggatgagaaaaaagagctcggtcatttgagtgccggggcgcggcggttgatcc 3692806 Query: 480 tcggtatcatcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgttta 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3692805 tcggtatcatcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgttta 3692746 Query: 540 acccgctggcgcagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggc 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3692745 acccgctggcgcagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggc 3692686 Query: 600 ggatgccggggcgcttctcggcgctaatgttgattgtgctg 640 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 3692685 ggatgccggggcgcttctcggcgctaatgttgattgtgctg 3692645
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 1255 bits (633), Expect = 0.0 Identities = 640/641 (99%), Gaps = 1/641 (0%) Strand = Plus / Plus Query: 1 ctgaaaacgcc-gtcgggagtgcatcatgagtatcctgacccggtggttgcttatcccgc 59 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3945153 ctgaaaacgccagtcgggagtgcatcatgagtatcctgacccggtggttgcttatcccgc 3945212 Query: 60 cggtcaacgcgcggcttatcgggcgttatcgcgattatcgtcgtcacggtgcgtcggctt 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3945213 cggtcaacgcgcggcttatcgggcgttatcgcgattatcgtcgtcacggtgcgtcggctt 3945272 Query: 120 tcagcgcgacgctcggctgtttctggatgatcctggcctggatttttattccgctggagc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3945273 tcagcgcgacgctcggctgtttctggatgatcctggcctggatttttattccgctggagc 3945332 Query: 180 acccgcgctggcagcgtattcgcgcagaacataaaaacctgtatccgcatatcaacgcct 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3945333 acccgcgctggcagcgtattcgcgcagaacataaaaacctgtatccgcatatcaacgcct 3945392 Query: 240 cgcgtccgcgtccgctggacccggtccgttatctcattcaaacatgctggttattgatcg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3945393 cgcgtccgcgtccgctggacccggtccgttatctcattcaaacatgctggttattgatcg 3945452 Query: 300 gtgcatcgcgcaaagaaacgccgaaaccgcgcaggcgggcattttcaggtctgcaaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3945453 gtgcatcgcgcaaagaaacgccgaaaccgcgcaggcgggcattttcaggtctgcaaaata 3945512 Query: 360 ttcgtggacgttaccatcaatggatgaacgagctgcctgagcgcgttagccataaaacac 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3945513 ttcgtggacgttaccatcaatggatgaacgagctgcctgagcgcgttagccataaaacac 3945572 Query: 420 agcatctggatgagaaaaaagagctcggtcatttgagtgccggggcgcggcggttgatcc 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3945573 agcatctggatgagaaaaaagagctcggtcatttgagtgccggggcgcggcggttgatcc 3945632 Query: 480 tcggtatcatcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgttta 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3945633 tcggtatcatcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgttta 3945692 Query: 540 acccgctggcgcagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggc 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3945693 acccgctggcgcagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggc 3945752 Query: 600 ggatgccggggcgcttctcggcgctaatgttgattgtgctg 640 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 3945753 ggatgccggggcgcttctcggcgctaatgttgattgtgctg 3945793
>gb|U00039.1|ECOUW76 E. coli chromosomal region from 76.0 to 81.5 minutes Length = 225419 Score = 1241 bits (626), Expect = 0.0 Identities = 640/642 (99%), Gaps = 2/642 (0%) Strand = Plus / Minus Query: 1 ctgaaaacgcc-gtcgggagtgcatcatgagtatcctgacccggtggttgcttatcccgc 59 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109515 ctgaaaacgccagtcgggagtgcatcatgagtatcctgacccggtggttgcttatcccgc 109456 Query: 60 cggtcaacgcgcggcttatcgggcgttatcgcgattatcgtcgtcacggtgcgtcggctt 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109455 cggtcaacgcgcggcttatcgggcgttatcgcgattatcgtcgtcacggtgcgtcggctt 109396 Query: 120 tcagcgcgacgctcggctgtttctggatgatcctggcctggatttttattccgctggagc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109395 tcagcgcgacgctcggctgtttctggatgatcctggcctggatttttattccgctggagc 109336 Query: 180 acccgcgctggcagcgtattcgcgcagaacataaaaacctgtatccgcatatcaacgcct 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109335 acccgcgctggcagcgtattcgcgcagaacataaaaacctgtatccgcatatcaacgcct 109276 Query: 240 cgcgtccgcgtccgctggacccggtccgttatctcattcaaacatgctggttattgatcg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109275 cgcgtccgcgtccgctggacccggtccgttatctcattcaaacatgctggttattgatcg 109216 Query: 300 gtgcatcgcgcaaagaaacgccgaaaccgcgcaggcgggcattttcaggtctgcaaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109215 gtgcatcgcgcaaagaaacgccgaaaccgcgcaggcgggcattttcaggtctgcaaaata 109156 Query: 360 ttcgtggacgttaccatcaatggatgaacgagctgcctgagcgcgtta-gccataaaaca 418 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 109155 ttcgtggacgttaccatcaatggatgaacgagctgcctgagcgcgttacgccataaaaca 109096 Query: 419 cagcatctggatgagaaaaaagagctcggtcatttgagtgccggggcgcggcggttgatc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109095 cagcatctggatgagaaaaaagagctcggtcatttgagtgccggggcgcggcggttgatc 109036 Query: 479 ctcggtatcatcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgttt 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109035 ctcggtatcatcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgttt 108976 Query: 539 aacccgctggcgcagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacgg 598 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108975 aacccgctggcgcagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacgg 108916 Query: 599 cggatgccggggcgcttctcggcgctaatgttgattgtgctg 640 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 108915 cggatgccggggcgcttctcggcgctaatgttgattgtgctg 108874
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 1231 bits (621), Expect = 0.0 Identities = 637/641 (99%), Gaps = 1/641 (0%) Strand = Plus / Minus Query: 1 ctgaaaacgcc-gtcgggagtgcatcatgagtatcctgacccggtggttgcttatcccgc 59 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4270003 ctgaaaacgccagtcgggagtgcatcatgagtatcctgacccggtggttgcttatcccgc 4269944 Query: 60 cggtcaacgcgcggcttatcgggcgttatcgcgattatcgtcgtcacggtgcgtcggctt 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4269943 cggtcaacgcgcggcttatcgggcgttatcgcgattatcgtcgtcacggtgcgtcggctt 4269884 Query: 120 tcagcgcgacgctcggctgtttctggatgatcctggcctggatttttattccgctggagc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4269883 tcagcgcgacgctcggctgtttctggatgatcctggcctggatttttattccgctggagc 4269824 Query: 180 acccgcgctggcagcgtattcgcgcagaacataaaaacctgtatccgcatatcaacgcct 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4269823 acccgcgctggcagcgtattcgcgcagaacataaaaacctgtatccgcatatcaacgcct 4269764 Query: 240 cgcgtccgcgtccgctggacccggtccgttatctcattcaaacatgctggttattgatcg 299 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4269763 cgcgtccgcgtccgctggacccggtccgttatctcattcaaacatgctggttactgatcg 4269704 Query: 300 gtgcatcgcgcaaagaaacgccgaaaccgcgcaggcgggcattttcaggtctgcaaaata 359 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 4269703 gtgcatcgcgcaaagaaacgccgaaaccgcgcaggcgggcattttcaggtctgcagaata 4269644 Query: 360 ttcgtggacgttaccatcaatggatgaacgagctgcctgagcgcgttagccataaaacac 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4269643 ttcgtggacgttaccatcaatggatgaacgagctgcctgagcgcgttagccataaaacac 4269584 Query: 420 agcatctggatgagaaaaaagagctcggtcatttgagtgccggggcgcggcggttgatcc 479 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4269583 agcatcttgatgagaaaaaagagctcggtcatttgagtgccggggcgcggcggttgatcc 4269524 Query: 480 tcggtatcatcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgttta 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4269523 tcggtatcatcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgttta 4269464 Query: 540 acccgctggcgcagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggc 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4269463 acccgctggcgcagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggc 4269404 Query: 600 ggatgccggggcgcttctcggcgctaatgttgattgtgctg 640 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4269403 ggatgccggggcgcttctcggcgctaatgttgattgtgctg 4269363
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 1223 bits (617), Expect = 0.0 Identities = 637/641 (99%), Gaps = 2/641 (0%) Strand = Plus / Minus Query: 1 ctgaaaacgcc-gtcgggagtgcatcatgagtatcctgacccggtggttgcttatcccgc 59 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3664280 ctgaaaacgccagtcgggagtgcatcatgagtatcctgacccggtggttgcttatcccgc 3664221 Query: 60 cggtcaacgcgcggcttatcgggcgttatcgcgattatcgtcgtcacggtgcgtcggctt 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3664220 cggtcaacgcgcggcttatcgggcgttatcgcgattatcgtcgtcacggtgcgtcggctt 3664161 Query: 120 tcagcgcgacgctcggctgtttctggatgatcctggcctggatttttattccgctggagc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3664160 tcagcgcgacgctcggctgtttctggatgatcctggcctggatttttattccgctggagc 3664101 Query: 180 acccgcgctggcagcgtattcgcgcagaacataaaaacctgtatccgcatatcaacgcct 239 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 3664100 acccgcgctggcagcgtattcgcgcagaacataaaaacctgtatacgcatatcaacgcct 3664041 Query: 240 cgcgtccgcgtccgctggacccggtccgttatctcattcaaacatgctggttattgatcg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3664040 cgcgtccgcgtccgctggacccggtccgttatctcattcaaacatgctggttattgatcg 3663981 Query: 300 gtgcatcgcgcaaagaaacgccgaaaccgcgcaggcgggcattttcaggtctgcaaaata 359 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 3663980 gtgcatcgcgcaaagaaacgccgaaaccgcgca-gcgggcattttcaggtctgcaaaata 3663922 Query: 360 ttcgtggacgttaccatcaatggatgaacgagctgcctgagcgcgttagccataaaacac 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3663921 ttcgtggacgttaccatcaatggatgaacgagctgcctgagcgcgttagccataaaacac 3663862 Query: 420 agcatctggatgagaaaaaagagctcggtcatttgagtgccggggcgcggcggttgatcc 479 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3663861 agcatctggatgaaaaaaaagagctcggtcatttgagtgccggggcgcggcggttgatcc 3663802 Query: 480 tcggtatcatcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgttta 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3663801 tcggtatcatcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgttta 3663742 Query: 540 acccgctggcgcagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggc 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3663741 acccgctggcgcagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggc 3663682 Query: 600 ggatgccggggcgcttctcggcgctaatgttgattgtgctg 640 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 3663681 ggatgccggggcgcttctcggcgctaatgttgattgtgctg 3663641
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 1223 bits (617), Expect = 0.0 Identities = 637/641 (99%), Gaps = 2/641 (0%) Strand = Plus / Plus Query: 1 ctgaaaacgcc-gtcgggagtgcatcatgagtatcctgacccggtggttgcttatcccgc 59 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4109208 ctgaaaacgccagtcgggagtgcatcatgagtatcctgacccggtggttgcttatcccgc 4109267 Query: 60 cggtcaacgcgcggcttatcgggcgttatcgcgattatcgtcgtcacggtgcgtcggctt 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4109268 cggtcaacgcgcggcttatcgggcgttatcgcgattatcgtcgtcacggtgcgtcggctt 4109327 Query: 120 tcagcgcgacgctcggctgtttctggatgatcctggcctggatttttattccgctggagc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4109328 tcagcgcgacgctcggctgtttctggatgatcctggcctggatttttattccgctggagc 4109387 Query: 180 acccgcgctggcagcgtattcgcgcagaacataaaaacctgtatccgcatatcaacgcct 239 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 4109388 acccgcgctggcagcgtattcgcgcagaacataaaaacctgtatacgcatatcaacgcct 4109447 Query: 240 cgcgtccgcgtccgctggacccggtccgttatctcattcaaacatgctggttattgatcg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4109448 cgcgtccgcgtccgctggacccggtccgttatctcattcaaacatgctggttattgatcg 4109507 Query: 300 gtgcatcgcgcaaagaaacgccgaaaccgcgcaggcgggcattttcaggtctgcaaaata 359 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 4109508 gtgcatcgcgcaaagaaacgccgaaaccgcgca-gcgggcattttcaggtctgcaaaata 4109566 Query: 360 ttcgtggacgttaccatcaatggatgaacgagctgcctgagcgcgttagccataaaacac 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4109567 ttcgtggacgttaccatcaatggatgaacgagctgcctgagcgcgttagccataaaacac 4109626 Query: 420 agcatctggatgagaaaaaagagctcggtcatttgagtgccggggcgcggcggttgatcc 479 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4109627 agcatctggatgaaaaaaaagagctcggtcatttgagtgccggggcgcggcggttgatcc 4109686 Query: 480 tcggtatcatcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgttta 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4109687 tcggtatcatcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgttta 4109746 Query: 540 acccgctggcgcagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggc 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4109747 acccgctggcgcagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggc 4109806 Query: 600 ggatgccggggcgcttctcggcgctaatgttgattgtgctg 640 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4109807 ggatgccggggcgcttctcggcgctaatgttgattgtgctg 4109847
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 1207 bits (609), Expect = 0.0 Identities = 634/641 (98%), Gaps = 1/641 (0%) Strand = Plus / Minus Query: 1 ctgaaaacgcc-gtcgggagtgcatcatgagtatcctgacccggtggttgcttatcccgc 59 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4504635 ctgaaaacgccagtcgggagtgcatcatgagtatcctgacccggtggttgcttatcccgc 4504576 Query: 60 cggtcaacgcgcggcttatcgggcgttatcgcgattatcgtcgtcacggtgcgtcggctt 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4504575 cggtcaacgcgcggcttatcgggcgttatcgcgattatcgtcgtcacggtgcgtcggctt 4504516 Query: 120 tcagcgcgacgctcggctgtttctggatgatcctggcctggatttttattccgctggagc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 4504515 tcagcgcgacgctcggctgtttctggatgatcctggcctggatttttattccactggagc 4504456 Query: 180 acccgcgctggcagcgtattcgcgcagaacataaaaacctgtatccgcatatcaacgcct 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4504455 acccgcgctggcagcgtattcgcgcagaacataaaaacctgtatccgcatatcaacgcct 4504396 Query: 240 cgcgtccgcgtccgctggacccggtccgttatctcattcaaacatgctggttattgatcg 299 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4504395 cgcgtccgcgtccgctggacccggtccgttatctcattcaaacatgctggttactgatcg 4504336 Query: 300 gtgcatcgcgcaaagaaacgccgaaaccgcgcaggcgggcattttcaggtctgcaaaata 359 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 4504335 gtgcatcgcgcaaagaaacgccgaaaccgcgcaggcgggcattttcaggtctgcagaata 4504276 Query: 360 ttcgtggacgttaccatcaatggatgaacgagctgcctgagcgcgttagccataaaacac 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4504275 ttcgtggacgttaccatcaatggatgaacgagctgcctgagcgcgttagccataaaacac 4504216 Query: 420 agcatctggatgagaaaaaagagctcggtcatttgagtgccggggcgcggcggttgatcc 479 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4504215 agcatcttgatgagaaaaaagagctcggtcatttgagtgccggggcgcggcggttgatcc 4504156 Query: 480 tcggtatcatcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgttta 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4504155 tcggtatcatcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgttta 4504096 Query: 540 acccgctggcgcagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggc 599 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 4504095 acccgctggcgcagtttatcttcctgatgctgctgtgggggggagcgctgatcgtacggc 4504036 Query: 600 ggatgccggggcgcttctcggcgctaatgttgattgtgctg 640 ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 4504035 ggatgccggggcgcttctcagcgctaatgttgattgtgctg 4503995
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 1207 bits (609), Expect = 0.0 Identities = 634/641 (98%), Gaps = 1/641 (0%) Strand = Plus / Minus Query: 1 ctgaaaacgcc-gtcgggagtgcatcatgagtatcctgacccggtggttgcttatcccgc 59 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4437408 ctgaaaacgccagtcgggagtgcatcatgagtatcctgacccggtggttgcttatcccgc 4437349 Query: 60 cggtcaacgcgcggcttatcgggcgttatcgcgattatcgtcgtcacggtgcgtcggctt 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4437348 cggtcaacgcgcggcttatcgggcgttatcgcgattatcgtcgtcacggtgcgtcggctt 4437289 Query: 120 tcagcgcgacgctcggctgtttctggatgatcctggcctggatttttattccgctggagc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 4437288 tcagcgcgacgctcggctgtttctggatgatcctggcctggatttttattccactggagc 4437229 Query: 180 acccgcgctggcagcgtattcgcgcagaacataaaaacctgtatccgcatatcaacgcct 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4437228 acccgcgctggcagcgtattcgcgcagaacataaaaacctgtatccgcatatcaacgcct 4437169 Query: 240 cgcgtccgcgtccgctggacccggtccgttatctcattcaaacatgctggttattgatcg 299 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4437168 cgcgtccgcgtccgctggacccggtccgttatctcattcaaacatgctggttactgatcg 4437109 Query: 300 gtgcatcgcgcaaagaaacgccgaaaccgcgcaggcgggcattttcaggtctgcaaaata 359 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 4437108 gtgcatcgcgcaaagaaacgccgaaaccgcgcaggcgggcattttcaggtctgcagaata 4437049 Query: 360 ttcgtggacgttaccatcaatggatgaacgagctgcctgagcgcgttagccataaaacac 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4437048 ttcgtggacgttaccatcaatggatgaacgagctgcctgagcgcgttagccataaaacac 4436989 Query: 420 agcatctggatgagaaaaaagagctcggtcatttgagtgccggggcgcggcggttgatcc 479 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4436988 agcatcttgatgagaaaaaagagctcggtcatttgagtgccggggcgcggcggttgatcc 4436929 Query: 480 tcggtatcatcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgttta 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4436928 tcggtatcatcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgttta 4436869 Query: 540 acccgctggcgcagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggc 599 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 4436868 acccgctggcgcagtttatcttcctgatgctgctgtgggggggagcgctgatcgtacggc 4436809 Query: 600 ggatgccggggcgcttctcggcgctaatgttgattgtgctg 640 ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 4436808 ggatgccggggcgcttctcagcgctaatgttgattgtgctg 4436768
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 1191 bits (601), Expect = 0.0 Identities = 632/641 (98%), Gaps = 1/641 (0%) Strand = Plus / Plus Query: 1 ctgaaaacgcc-gtcgggagtgcatcatgagtatcctgacccggtggttgcttatcccgc 59 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4055792 ctgaaaacgccagtcgggagtgcatcatgagtatcctgacccggtggttgcttatcccgc 4055851 Query: 60 cggtcaacgcgcggcttatcgggcgttatcgcgattatcgtcgtcacggtgcgtcggctt 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4055852 cggtcaacgcgcggcttatcgggcgttatcgcgattatcgtcgtcacggtgcgtcggctt 4055911 Query: 120 tcagcgcgacgctcggctgtttctggatgatcctggcctggatttttattccgctggagc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4055912 tcagcgcgacgctcggctgtttctggatgatcctggcctggatttttattccgctggagc 4055971 Query: 180 acccgcgctggcagcgtattcgcgcagaacataaaaacctgtatccgcatatcaacgcct 239 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4055972 acccgcgctagcagcgtattcgcgcagaacataaaaacctgtatccgcatatcaacgcct 4056031 Query: 240 cgcgtccgcgtccgctggacccggtccgttatctcattcaaacatgctggttattgatcg 299 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4056032 cgcgtccgcgtccgctggacccggtccgttatctcattcaaacatgctggttactgatcg 4056091 Query: 300 gtgcatcgcgcaaagaaacgccgaaaccgcgcaggcgggcattttcaggtctgcaaaata 359 || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 4056092 gtacatcgcgcaaagaaacgccgaaaccgcgcaggcgggcattttcaggtctgcagaata 4056151 Query: 360 ttcgtggacgttaccatcaatggatgaacgagctgcctgagcgcgttagccataaaacac 419 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4056152 ttcgtggacgttaccatcaatagatgaacgagctgcctgagcgcgttagccataaaacac 4056211 Query: 420 agcatctggatgagaaaaaagagctcggtcatttgagtgccggggcgcggcggttgatcc 479 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4056212 agcatcttgatgagaaaaaagagctcggtcatttgagtgccggggcgcggcggttgatcc 4056271 Query: 480 tcggtatcatcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgttta 539 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 4056272 tcggtatcatcgtcaccttctcgctgattctggcgttaatctgcgttactcaaccgttta 4056331 Query: 540 acccgctggcgcagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggc 599 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 4056332 acccgctggcgcagtttatcttcctgatgctgctgtggggtgtagcgctgatcgtacggc 4056391 Query: 600 ggatgccggggcgcttctcggcgctaatgttgattgtgctg 640 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4056392 ggatgccggggcgcttctcggcgctaatgttgattgtgctg 4056432
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 1176 bits (593), Expect = 0.0 Identities = 630/641 (98%), Gaps = 1/641 (0%) Strand = Plus / Minus Query: 1 ctgaaaacgcc-gtcgggagtgcatcatgagtatcctgacccggtggttgcttatcccgc 59 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4133985 ctgaaaacgccagtcgggagtgcatcatgagtatcctgacccggtggttgcttatcccgc 4133926 Query: 60 cggtcaacgcgcggcttatcgggcgttatcgcgattatcgtcgtcacggtgcgtcggctt 119 |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4133925 cggtcaacgcacggcttatcgggcgttatcgcgattatcgtcgtcacggcgcgtcggctt 4133866 Query: 120 tcagcgcgacgctcggctgtttctggatgatcctggcctggatttttattccgctggagc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4133865 tcagcgcgacgctcggctgtttctggatgatcctggcctggatttttattccgctggagc 4133806 Query: 180 acccgcgctggcagcgtattcgcgcagaacataaaaacctgtatccgcatatcaacgcct 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4133805 acccgcgctggcagcgtattcgcgcagaacataaaaacctgtatccgcatatcaacgcct 4133746 Query: 240 cgcgtccgcgtccgctggacccggtccgttatctcattcaaacatgctggttattgatcg 299 |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 4133745 cgcgtccgcgtccgctggacccggtccgttatcttattcaaacatgctggttactgatcg 4133686 Query: 300 gtgcatcgcgcaaagaaacgccgaaaccgcgcaggcgggcattttcaggtctgcaaaata 359 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 4133685 gtgcatcgcgcaaagaaacgccgaaaccgcgcaggcgggcattttcaggtctacaaaata 4133626 Query: 360 ttcgtggacgttaccatcaatggatgaacgagctgcctgagcgcgttagccataaaacac 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4133625 ttcgtggacgttaccatcaatggatgaacgagctgcctgagcgcgttagccataaaacac 4133566 Query: 420 agcatctggatgagaaaaaagagctcggtcatttgagtgccggggcgcggcggttgatcc 479 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4133565 agcatcttgatgagaaaaaagagctcggtcatttgagtgccggggcgcggcggttgatcc 4133506 Query: 480 tcggtatcatcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgttta 539 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4133505 ttggtatcatcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgttta 4133446 Query: 540 acccgctggcgcagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggc 599 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4133445 acccgctagcgcagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggc 4133386 Query: 600 ggatgccggggcgcttctcggcgctaatgttgattgtgctg 640 ||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 4133385 ggatgccggggcgcttctcggcgctgatgctgattgtgctg 4133345
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 1168 bits (589), Expect = 0.0 Identities = 619/629 (98%) Strand = Plus / Minus Query: 12 gtcgggagtgcatcatgagtatcctgacccggtggttgcttatcccgccggtcaacgcgc 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3961869 gtcgggagtgcatcatgagtatcctgacccggtggttgcttatcccgccggtcaacgcac 3961810 Query: 72 ggcttatcgggcgttatcgcgattatcgtcgtcacggtgcgtcggctttcagcgcgacgc 131 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 3961809 ggcttatcgggcgttatcgcgattatcgtcgtcacggcgcgtcggctttcagcgcgacgc 3961750 Query: 132 tcggctgtttctggatgatcctggcctggatttttattccgctggagcacccgcgctggc 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3961749 tcggctgtttctggatgatcctggcctggatttttattccgctggagcacccgcgctggc 3961690 Query: 192 agcgtattcgcgcagaacataaaaacctgtatccgcatatcaacgcctcgcgtccgcgtc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3961689 agcgtattcgcgcagaacataaaaacctgtatccgcatatcaacgcctcgcgtccgcgtc 3961630 Query: 252 cgctggacccggtccgttatctcattcaaacatgctggttattgatcggtgcatcgcgca 311 |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 3961629 cgctggacccggtccgttatcttattcaaacatgctggttactgatcggtgcatcgcgca 3961570 Query: 312 aagaaacgccgaaaccgcgcaggcgggcattttcaggtctgcaaaatattcgtggacgtt 371 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 3961569 aagaaacgccgaaaccgcgcaggcgggcattttcaggtctacaaaatattcgtggacgtt 3961510 Query: 372 accatcaatggatgaacgagctgcctgagcgcgttagccataaaacacagcatctggatg 431 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 3961509 accatcaatggatgaacgagctgcctgagcgcgttagccataaaacacagcatcttgatg 3961450 Query: 432 agaaaaaagagctcggtcatttgagtgccggggcgcggcggttgatcctcggtatcatcg 491 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 3961449 agaaaaaagagctcggtcatttgagtgccggggcgcggcggttgatccttggtatcatcg 3961390 Query: 492 tcaccttctcgctgattctggcgttaatctgcgttactcagccgtttaacccgctggcgc 551 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 3961389 tcaccttctcgctgattctggcgttaatctgcgttactcagccgtttaacccgctagcgc 3961330 Query: 552 agtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggcggatgccggggc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3961329 agtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggcggatgccggggc 3961270 Query: 612 gcttctcggcgctaatgttgattgtgctg 640 ||||||||||||| ||| ||||||||||| Sbjct: 3961269 gcttctcggcgctgatgctgattgtgctg 3961241
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 1162 bits (586), Expect = 0.0 Identities = 628/641 (97%), Gaps = 7/641 (1%) Strand = Plus / Minus Query: 1 ctgaaaacgcc-gtcgggagtgcatcatgagtatcctgacccggtggttgcttatcccgc 59 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3540873 ctgaaaacgccagtcgggagtgcatcatgagtatcctgacccggtggttgcttatcccgc 3540814 Query: 60 cggtcaacgcgcggcttatcgggcgttatcgcgattatcgtcgtcacggtgcgtcggctt 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3540813 cggtcaacgcgcggcttatcgggcgttatcgcgattatcgtcgtcacggtgcgtcggctt 3540754 Query: 120 tcagcgcgacgctcggctgtttctggatgatcctggcctggatttttattccgctggagc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3540753 tcagcgcgacgctcggctgtttctggatgatcctggcctggatttttattccgctggagc 3540694 Query: 180 acccgcgctggcagcgtattcgcgcagaacataaaaacctgtatccgcatatcaacgcct 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3540693 acccgcgctggcagcgtattcgcgcagaacataaaaacctgtatccgcatatcaacgcct 3540634 Query: 240 cgcgtccgcgtccgctggacccggtccgttatctcattcaaacatgctggttattgatcg 299 ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 3540633 cgcgtccgc------tggacccggtccgttatctcattcaaacatgctggttactgatcg 3540580 Query: 300 gtgcatcgcgcaaagaaacgccgaaaccgcgcaggcgggcattttcaggtctgcaaaata 359 || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 3540579 gtacatcgcgcaaagaaacgccgaaaccgcgcaggcgggcattttcaggtctgcagaata 3540520 Query: 360 ttcgtggacgttaccatcaatggatgaacgagctgcctgagcgcgttagccataaaacac 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3540519 ttcgtggacgttaccatcaatggatgaacgagctgcctgagcgcgttagccataaaacac 3540460 Query: 420 agcatctggatgagaaaaaagagctcggtcatttgagtgccggggcgcggcggttgatcc 479 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3540459 agcatcttgatgagaaaaaagagctcggtcatttgagtgccggggcgcggcggttgatcc 3540400 Query: 480 tcggtatcatcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgttta 539 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 3540399 tcggtatcatcgtcaccttctcgctgattctggcgttaatctgcgttactcaaccgttta 3540340 Query: 540 acccgctggcgcagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggc 599 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 3540339 acccgctggcgcagtttatcttcctgatgctgctgtggggtgtagcgctgatcgtacggc 3540280 Query: 600 ggatgccggggcgcttctcggcgctaatgttgattgtgctg 640 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 3540279 ggatgccggggcgcttctcggcgctaatgttgattgtgctg 3540239
>emb|AJ515698.1|CSP515698 Citrobacter sp. Fec2 bcsA gene for cellulose synthase catalytic subunit Length = 2782 Score = 147 bits (74), Expect = 5e-32 Identities = 131/150 (87%) Strand = Plus / Plus Query: 491 gtcaccttctcgctgattctggcgttaatctgcgttactcagccgtttaacccgctggcg 550 ||||| || ||| ||||||||||| | || ||||| || ||||||||||||||||||||| Sbjct: 544 gtcactttttcgttgattctggcgctgatatgcgtgacccagccgtttaacccgctggcg 603 Query: 551 cagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggcggatgccgggg 610 || || ||||||||||| ||||||||||| || ||||||||||| || || ||||||||| Sbjct: 604 caattcatcttcctgatactgctgtggggcgttgcgctgatcgtgcgccgcatgccgggg 663 Query: 611 cgcttctcggcgctaatgttgattgtgctg 640 |||||||| ||||| ||| ||||||||||| Sbjct: 664 cgcttctccgcgctgatgctgattgtgctg 693 Score = 101 bits (51), Expect = 3e-18 Identities = 153/187 (81%) Strand = Plus / Plus Query: 12 gtcgggagtgcatcatgagtatcctgacccggtggttgcttatcccgccggtcaacgcgc 71 |||||||| ||||||||||| ||||| |||||||||||||||| |||||||| | ||| | Sbjct: 65 gtcgggagcgcatcatgagtgtcctgtcccggtggttgcttattccgccggtgagcgccc 124 Query: 72 ggcttatcgggcgttatcgcgattatcgtcgtcacggtgcgtcggctttcagcgcgacgc 131 | | | || ||| |||| | ||||||||| || || |||||| ||||||||||| ||| Sbjct: 125 gcttaagcgagcgctatcagggttatcgtcgacatggcgcgtcgcctttcagcgcggcgc 184 Query: 132 tcggctgtttctggatgatcctggcctggatttttattccgctggagcacccgcgctggc 191 | || || | ||| |||| || || ||| | || || |||||||||||||||||||||| Sbjct: 185 tgggttgcctgtgggtgattctcgcatgggtcttcatcccgctggagcacccgcgctggc 244 Query: 192 agcgtat 198 ||||||| Sbjct: 245 agcgtat 251
>gb|AE008867.1| Salmonella typhimurium LT2, section 171 of 220 of the complete genome Length = 21910 Score = 97.6 bits (49), Expect = 4e-17 Identities = 193/241 (80%) Strand = Plus / Minus Query: 39 cccggtggttgcttatcccgccggtcaacgcgcggcttatcgggcgttatcgcgattatc 98 |||||||| |||||||||||||||| | |||||| | | || ||| |||| | ||| | Sbjct: 16948 cccggtggctgcttatcccgccggttagcgcgcgtttgagcgagcgctatcagggttacc 16889 Query: 99 gtcgtcacggtgcgtcggctttcagcgcgacgctcggctgtttctggatgatcctggcct 158 | || ||||| |||||| | || ||||| |||||||||| | |||| ||| ||||| | Sbjct: 16888 gccgccacggcgcgtcgccgtttagcgcagcgctcggctgcctgtggacgattctggcgt 16829 Query: 159 ggatttttattccgctggagcacccgcgctggcagcgtattcgcgcagaacataaaaacc 218 |||| | ||||||| ||||| |||||||||||||||||||||| | |||||| | Sbjct: 16828 ggatagtgtttccgcttgagcatccgcgctggcagcgtattcgcgacgggcataaagcgc 16769 Query: 219 tgtatccgcatatcaacgcctcgcgtccgcgtccgctggacccggtccgttatctcattc 278 | ||||||||||| |||||| | || ||||| ||||||||||||| |||||| ||||||| Sbjct: 16768 tttatccgcatattaacgccgcacgcccgcgcccgctggacccggcccgttacctcattc 16709 Query: 279 a 279 | Sbjct: 16708 a 16708 Score = 73.8 bits (37), Expect = 6e-10 Identities = 112/137 (81%) Strand = Plus / Minus Query: 488 atcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgtttaacccgctg 547 ||||| ||||| || ||||| |||||| | ||||| |||| ||||| ||||||||||| Sbjct: 16499 atcgtgaccttttcactgatactggcgctgatctgtattacgcagccatttaacccgcta 16440 Query: 548 gcgcagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggcggatgccg 607 |||| |||||||| ||| || |||||||||| || |||||| | ||||| || |||||| Sbjct: 16439 tcgcaatttatctttctgctgttgctgtggggcgttgcgctgttggtacgacgtatgccg 16380 Query: 608 gggcgcttctcggcgct 624 || ||||| || ||||| Sbjct: 16379 ggacgcttttccgcgct 16363 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 360 ttcgtggacgttaccatcaatggatg 385 |||||||||||||||||||||||||| Sbjct: 16627 ttcgtggacgttaccatcaatggatg 16602
>emb|AL627281.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 17/20 Length = 265050 Score = 97.6 bits (49), Expect = 4e-17 Identities = 193/241 (80%) Strand = Plus / Plus Query: 39 cccggtggttgcttatcccgccggtcaacgcgcggcttatcgggcgttatcgcgattatc 98 |||||||| |||||||||||||||| | |||||| | | || ||| |||| | ||| | Sbjct: 66963 cccggtggctgcttatcccgccggttagcgcgcgcttgagcgagcgctatcagggttacc 67022 Query: 99 gtcgtcacggtgcgtcggctttcagcgcgacgctcggctgtttctggatgatcctggcct 158 | || ||||| |||||| | || ||||| |||||||||| | |||| ||| ||||| | Sbjct: 67023 gccgccacggcgcgtcgccgtttagcgcagcgctcggctgcctgtggacgattctggcgt 67082 Query: 159 ggatttttattccgctggagcacccgcgctggcagcgtattcgcgcagaacataaaaacc 218 |||| | ||||||| ||||| |||||||||||||||||||||| | |||||| | Sbjct: 67083 ggatagtgtttccgcttgagcatccgcgctggcagcgtattcgcgacgggcataaagcgc 67142 Query: 219 tgtatccgcatatcaacgcctcgcgtccgcgtccgctggacccggtccgttatctcattc 278 | ||||||||||| |||||| | || ||||| ||||||||||||| |||||| ||||||| Sbjct: 67143 tttatccgcatattaacgccgcccgcccgcgcccgctggacccggcccgttacctcattc 67202 Query: 279 a 279 | Sbjct: 67203 a 67203 Score = 73.8 bits (37), Expect = 6e-10 Identities = 112/137 (81%) Strand = Plus / Plus Query: 488 atcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgtttaacccgctg 547 ||||| ||||| || ||||| |||||| | ||||| |||| ||||| ||||||||||| Sbjct: 67412 atcgtgaccttttcactgatactggcgctgatctgtattacgcagccatttaacccgcta 67471 Query: 548 gcgcagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggcggatgccg 607 |||| |||||||| ||| || |||||||||| || |||||| | ||||| || |||||| Sbjct: 67472 tcgcaatttatctttctgctgttgctgtggggcgttgcgctgttggtacgacgtatgccg 67531 Query: 608 gggcgcttctcggcgct 624 || ||||| || ||||| Sbjct: 67532 ggacgcttttccgcgct 67548 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 360 ttcgtggacgttaccatcaatggatg 385 |||||||||||||||||||||||||| Sbjct: 67284 ttcgtggacgttaccatcaatggatg 67309
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 97.6 bits (49), Expect = 4e-17 Identities = 193/241 (80%) Strand = Plus / Minus Query: 39 cccggtggttgcttatcccgccggtcaacgcgcggcttatcgggcgttatcgcgattatc 98 |||||||| |||||||||||||||| | |||||| | | || ||| |||| | ||| | Sbjct: 3596874 cccggtggctgcttatcccgccggttagcgcgcgtttgaacgagcgctatcagggttacc 3596815 Query: 99 gtcgtcacggtgcgtcggctttcagcgcgacgctcggctgtttctggatgatcctggcct 158 | || ||||| |||||| | || ||||| |||||||||| | |||||||| ||||| | Sbjct: 3596814 gccgccacggcgcgtcgccgtttagcgcagcgctcggctgcatgtggatgattctggcgt 3596755 Query: 159 ggatttttattccgctggagcacccgcgctggcagcgtattcgcgcagaacataaaaacc 218 |||| | ||||||| ||||| |||||||||||||||||||||| | |||||| | Sbjct: 3596754 ggatagtgtttccgcttgagcatccgcgctggcagcgtattcgcgacgggcataaagcgc 3596695 Query: 219 tgtatccgcatatcaacgcctcgcgtccgcgtccgctggacccggtccgttatctcattc 278 | ||||||||||| |||||| | | ||||| ||||||||||||| |||||| ||||||| Sbjct: 3596694 tttatccgcatattaacgccgcctgcccgcgcccgctggacccggcccgttacctcattc 3596635 Query: 279 a 279 | Sbjct: 3596634 a 3596634 Score = 73.8 bits (37), Expect = 6e-10 Identities = 112/137 (81%) Strand = Plus / Minus Query: 488 atcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgtttaacccgctg 547 ||||| ||||| || ||||| |||||| | ||||| |||| ||||| ||||||||||| Sbjct: 3596425 atcgtgaccttttcactgatactggcgctgatctgtattacgcagccatttaacccgcta 3596366 Query: 548 gcgcagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggcggatgccg 607 |||| |||||||| ||| || |||||||||| || |||||| | ||||| || |||||| Sbjct: 3596365 tcgcaatttatctttctgctgttgctgtggggcgttgcgctgttggtacgacgtatgccg 3596306 Query: 608 gggcgcttctcggcgct 624 || ||||| || ||||| Sbjct: 3596305 ggacgcttttccgcgct 3596289 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 360 ttcgtggacgttaccatcaatggatg 385 |||||||||||||||||||||||||| Sbjct: 3596553 ttcgtggacgttaccatcaatggatg 3596528
>emb|AJ315770.1|STY315770 Salmonella typhimurium cellulose biosynthesis operon (bcsABZC) Length = 10866 Score = 97.6 bits (49), Expect = 4e-17 Identities = 193/241 (80%) Strand = Plus / Plus Query: 39 cccggtggttgcttatcccgccggtcaacgcgcggcttatcgggcgttatcgcgattatc 98 |||||||| |||||||||||||||| | |||||| | | || ||| |||| | ||| | Sbjct: 1187 cccggtggctgcttatcccgccggttagcgcgcgtttgagcgagcgctatcagggttacc 1246 Query: 99 gtcgtcacggtgcgtcggctttcagcgcgacgctcggctgtttctggatgatcctggcct 158 | || ||||| |||||| | || ||||| |||||||||| | |||| ||| ||||| | Sbjct: 1247 gccgccacggcgcgtcgccgtttagcgcagcgctcggctgcctgtggacgattctggcgt 1306 Query: 159 ggatttttattccgctggagcacccgcgctggcagcgtattcgcgcagaacataaaaacc 218 |||| | ||||||| ||||| |||||||||||||||||||||| | |||||| | Sbjct: 1307 ggatagtgtttccgcttgagcatccgcgctggcagcgtattcgcgacgggcataaagcgc 1366 Query: 219 tgtatccgcatatcaacgcctcgcgtccgcgtccgctggacccggtccgttatctcattc 278 | ||||||||||| |||||| | || ||||| ||||||||||||| |||||| ||||||| Sbjct: 1367 tttatccgcatattaacgccgcacgcccgcgcccgctggacccggcccgttacctcattc 1426 Query: 279 a 279 | Sbjct: 1427 a 1427 Score = 73.8 bits (37), Expect = 6e-10 Identities = 112/137 (81%) Strand = Plus / Plus Query: 488 atcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgtttaacccgctg 547 ||||| ||||| || ||||| |||||| | ||||| |||| ||||| ||||||||||| Sbjct: 1636 atcgtgaccttttcactgatactggcgctgatctgtattacgcagccatttaacccgcta 1695 Query: 548 gcgcagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggcggatgccg 607 |||| |||||||| ||| || |||||||||| || |||||| | ||||| || |||||| Sbjct: 1696 tcgcaatttatctttctgctgttgctgtggggcgttgcgctgttggtacgacgtatgccg 1755 Query: 608 gggcgcttctcggcgct 624 || ||||| || ||||| Sbjct: 1756 ggacgcttttccgcgct 1772 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 360 ttcgtggacgttaccatcaatggatg 385 |||||||||||||||||||||||||| Sbjct: 1508 ttcgtggacgttaccatcaatggatg 1533
>emb|AJ315148.1|STY315148 Salmonella typhimurium LT2 yhjK gene, cellulose synthesis operons bcsABZC and bcsEFG, and yhjV gene Length = 18773 Score = 97.6 bits (49), Expect = 4e-17 Identities = 193/241 (80%) Strand = Plus / Minus Query: 39 cccggtggttgcttatcccgccggtcaacgcgcggcttatcgggcgttatcgcgattatc 98 |||||||| |||||||||||||||| | |||||| | | || ||| |||| | ||| | Sbjct: 11897 cccggtggctgcttatcccgccggttagcgcgcgtttgagcgagcgctatcagggttacc 11838 Query: 99 gtcgtcacggtgcgtcggctttcagcgcgacgctcggctgtttctggatgatcctggcct 158 | || ||||| |||||| | || ||||| |||||||||| | |||| ||| ||||| | Sbjct: 11837 gccgccacggcgcgtcgccgtttagcgcagcgctcggctgcctgtggacgattctggcgt 11778 Query: 159 ggatttttattccgctggagcacccgcgctggcagcgtattcgcgcagaacataaaaacc 218 |||| | ||||||| ||||| |||||||||||||||||||||| | |||||| | Sbjct: 11777 ggatagtgtttccgcttgagcatccgcgctggcagcgtattcgcgacgggcataaagcgc 11718 Query: 219 tgtatccgcatatcaacgcctcgcgtccgcgtccgctggacccggtccgttatctcattc 278 | ||||||||||| |||||| | || ||||| ||||||||||||| |||||| ||||||| Sbjct: 11717 tttatccgcatattaacgccgcacgcccgcgcccgctggacccggcccgttacctcattc 11658 Query: 279 a 279 | Sbjct: 11657 a 11657 Score = 73.8 bits (37), Expect = 6e-10 Identities = 112/137 (81%) Strand = Plus / Minus Query: 488 atcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgtttaacccgctg 547 ||||| ||||| || ||||| |||||| | ||||| |||| ||||| ||||||||||| Sbjct: 11448 atcgtgaccttttcactgatactggcgctgatctgtattacgcagccatttaacccgcta 11389 Query: 548 gcgcagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggcggatgccg 607 |||| |||||||| ||| || |||||||||| || |||||| | ||||| || |||||| Sbjct: 11388 tcgcaatttatctttctgctgttgctgtggggcgttgcgctgttggtacgacgtatgccg 11329 Query: 608 gggcgcttctcggcgct 624 || ||||| || ||||| Sbjct: 11328 ggacgcttttccgcgct 11312 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 360 ttcgtggacgttaccatcaatggatg 385 |||||||||||||||||||||||||| Sbjct: 11576 ttcgtggacgttaccatcaatggatg 11551
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 97.6 bits (49), Expect = 4e-17 Identities = 193/241 (80%) Strand = Plus / Plus Query: 39 cccggtggttgcttatcccgccggtcaacgcgcggcttatcgggcgttatcgcgattatc 98 |||||||| |||||||||||||||| | |||||| | | || ||| |||| | ||| | Sbjct: 4024609 cccggtggctgcttatcccgccggttagcgcgcgcttgagcgagcgctatcagggttacc 4024668 Query: 99 gtcgtcacggtgcgtcggctttcagcgcgacgctcggctgtttctggatgatcctggcct 158 | || ||||| |||||| | || ||||| |||||||||| | |||| ||| ||||| | Sbjct: 4024669 gccgccacggcgcgtcgccgtttagcgcagcgctcggctgcctgtggacgattctggcgt 4024728 Query: 159 ggatttttattccgctggagcacccgcgctggcagcgtattcgcgcagaacataaaaacc 218 |||| | ||||||| ||||| |||||||||||||||||||||| | |||||| | Sbjct: 4024729 ggatagtgtttccgcttgagcatccgcgctggcagcgtattcgcgacgggcataaagcgc 4024788 Query: 219 tgtatccgcatatcaacgcctcgcgtccgcgtccgctggacccggtccgttatctcattc 278 | ||||||||||| |||||| | || ||||| ||||||||||||| |||||| ||||||| Sbjct: 4024789 tttatccgcatattaacgccgcccgcccgcgcccgctggacccggcccgttacctcattc 4024848 Query: 279 a 279 | Sbjct: 4024849 a 4024849 Score = 73.8 bits (37), Expect = 6e-10 Identities = 112/137 (81%) Strand = Plus / Plus Query: 488 atcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgtttaacccgctg 547 ||||| ||||| || ||||| |||||| | ||||| |||| ||||| ||||||||||| Sbjct: 4025058 atcgtgaccttttcactgatactggcgctgatctgtattacgcagccatttaacccgcta 4025117 Query: 548 gcgcagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggcggatgccg 607 |||| |||||||| ||| || |||||||||| || |||||| | ||||| || |||||| Sbjct: 4025118 tcgcaatttatctttctgctgttgctgtggggcgttgcgctgttggtacgacgtatgccg 4025177 Query: 608 gggcgcttctcggcgct 624 || ||||| || ||||| Sbjct: 4025178 ggacgcttttccgcgct 4025194 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 360 ttcgtggacgttaccatcaatggatg 385 |||||||||||||||||||||||||| Sbjct: 4024930 ttcgtggacgttaccatcaatggatg 4024955
>gb|AF466300.1| Salmonella typhimurium cel operon, complete sequence Length = 7279 Score = 89.7 bits (45), Expect = 1e-14 Identities = 192/241 (79%) Strand = Plus / Plus Query: 39 cccggtggttgcttatcccgccggtcaacgcgcggcttatcgggcgttatcgcgattatc 98 |||||||| |||||||||||||||| | | |||| | | || ||| |||| | ||| | Sbjct: 1230 cccggtggctgcttatcccgccggttagctcgcgtttgagcgagcgctatcagggttacc 1289 Query: 99 gtcgtcacggtgcgtcggctttcagcgcgacgctcggctgtttctggatgatcctggcct 158 | || ||||| |||||| | || ||||| |||||||||| | |||| ||| ||||| | Sbjct: 1290 gccgccacggggcgtcgccgtttagcgcagcgctcggctgcctgtggacgattctggcgt 1349 Query: 159 ggatttttattccgctggagcacccgcgctggcagcgtattcgcgcagaacataaaaacc 218 |||| | ||||||| ||||| |||||||||||||||||||||| | |||||| | Sbjct: 1350 ggatagtgtttccgcttgagcatccgcgctggcagcgtattcgcgacgggcataaagcgc 1409 Query: 219 tgtatccgcatatcaacgcctcgcgtccgcgtccgctggacccggtccgttatctcattc 278 | ||||||||||| |||||| | || ||||| ||||||||||||| |||||| ||||||| Sbjct: 1410 tttatccgcatattaacgccgcacgcccgcgcccgctggacccggcccgttacctcattc 1469 Query: 279 a 279 | Sbjct: 1470 a 1470 Score = 73.8 bits (37), Expect = 6e-10 Identities = 112/137 (81%) Strand = Plus / Plus Query: 488 atcgtcaccttctcgctgattctggcgttaatctgcgttactcagccgtttaacccgctg 547 ||||| ||||| || ||||| |||||| | ||||| |||| ||||| ||||||||||| Sbjct: 1679 atcgtgaccttttcactgatactggcgctgatctgtattacgcagccatttaacccgcta 1738 Query: 548 gcgcagtttatcttcctgatgctgctgtggggggtagcgctgatcgtacggcggatgccg 607 |||| |||||||| ||| || |||||||||| || |||||| | ||||| || |||||| Sbjct: 1739 tcgcaatttatctttctgctgttgctgtggggcgttgcgctgttggtacgacgtatgccg 1798 Query: 608 gggcgcttctcggcgct 624 || ||||| || ||||| Sbjct: 1799 ggacgcttttccgcgct 1815 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 360 ttcgtggacgttaccatcaatggatg 385 |||||||||||||||||||||||||| Sbjct: 1551 ttcgtggacgttaccatcaatggatg 1576
>emb|AJ515699.1|ESA515699 Enterobacter sakazakii bcsA gene for cellulose synthase catalytic subunit Length = 3040 Score = 58.0 bits (29), Expect = 4e-05 Identities = 117/145 (80%), Gaps = 1/145 (0%) Strand = Plus / Plus Query: 497 ttctcgctgattctggcgttaatctgcgttactcagccgtttaacccgctggcgcagttt 556 ||||| |||||||||||| | |||| |||| || || || || || ||||||||||| Sbjct: 672 ttctcactgattctggcgctggtctgtattacgcaacccttcaatcccctggcgcagttc 731 Query: 557 atcttcctgatgctgctgtggggggtagcgctgatcgtacggcggatgccggggcgcttc 616 | ||||||||| ||||||||||| || ||| || | || || ||||| ||||| |||||| Sbjct: 732 accttcctgatcctgctgtggggcgtggcgttgctggtgcgtcggattccgggccgcttc 791 Query: 617 tc-ggcgctaatgttgattgtgctg 640 || ||||| ||| ||||||||||| Sbjct: 792 tcttgcgctgatgctgattgtgctg 816
>gb|AC011761.15| Drosophila melanogaster clone BACH50G05, complete sequence Length = 108727 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 gatcctggcctggatttttat 168 ||||||||||||||||||||| Sbjct: 49008 gatcctggcctggatttttat 48988
>gb|AC023684.4| Drosophila melanogaster X BAC RP98-7P13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 178077 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 ttatcgcgattatcgtcgtca 105 ||||||||||||||||||||| Sbjct: 51820 ttatcgcgattatcgtcgtca 51800
>tpg|BK003034.1| TPA: TPA_inf: Drosophila melanogaster HDC17524 (HDC17524) gene, complete cds Length = 901 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 ttatcgcgattatcgtcgtca 105 ||||||||||||||||||||| Sbjct: 678 ttatcgcgattatcgtcgtca 698
>gb|AE003570.4| Drosophila melanogaster chromosome X, section 69 of 74 of the complete sequence Length = 300051 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 gatcctggcctggatttttat 168 ||||||||||||||||||||| Sbjct: 55970 gatcctggcctggatttttat 55990
>gb|AE003434.4| Drosophila melanogaster chromosome X, section 18 of 74 of the complete sequence Length = 303928 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 ttatcgcgattatcgtcgtca 105 ||||||||||||||||||||| Sbjct: 214390 ttatcgcgattatcgtcgtca 214410
>gb|AC150004.3| Mus musculus chromosome 7, clone RP24-368P9, complete sequence Length = 176113 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ggatgatcctggcctggatt 163 |||||||||||||||||||| Sbjct: 62390 ggatgatcctggcctggatt 62371
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 catcgcgcaaagaaacgccg 322 |||||||||||||||||||| Sbjct: 94294 catcgcgcaaagaaacgccg 94275
>gb|AY167043.1| Mus musculus rhomboid-related protein (Rhor) mRNA, complete cds Length = 3684 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 596 cggcggatgccggggcgcttctcggcgc 623 ||||||| ||||||||||||||| |||| Sbjct: 546 cggcggaagccggggcgcttctctgcgc 519
>gb|AC127422.4| Mus musculus BAC clone RP24-383K20 from chromosome 9, complete sequence Length = 198803 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 409 ccataaaacacagcatctggatga 432 |||||||||||||||||| ||||| Sbjct: 24206 ccataaaacacagcatcttgatga 24229
>gb|AF550129.1| Homo sapiens transcription factor Dp-1 (TFDP1) gene, partial cds Length = 55319 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 558 tcttcctgatgctgctgtgggggg 581 |||||||| ||||||||||||||| Sbjct: 27523 tcttcctgctgctgctgtgggggg 27546
>gb|AC084391.1| Mus musculus BAC clone RP23-294I17 from 1, complete sequence Length = 166182 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 ctggcctggatttttattccgctg 175 ||||||||||||||| |||||||| Sbjct: 46549 ctggcctggatttttcttccgctg 46572
>gb|AC102561.4| Mus musculus chromosome 7, clone RP23-201O19, complete sequence Length = 195549 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggatgatcctggcctggatt 163 |||||||||||||||||||| Sbjct: 46708 ggatgatcctggcctggatt 46727
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 485 atcatcgtcaccttctcgctgattctggcgtt 516 ||||||| ||| ||||||||||| |||||||| Sbjct: 1933037 atcatcggcactttctcgctgatgctggcgtt 1933068
>emb|AL442125.13| Human DNA sequence from clone RP11-230F18 on chromosome 13 Contains the 5' end of the gene for FLJ10704 (FLJ20092), a novel gene, a novel gene (FLJ20623), the TFDP1 gene for transcription factor Dp-1 (DP-1, DRTF1) and 5 CpG islands, complete sequence Length = 184889 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 558 tcttcctgatgctgctgtgggggg 581 |||||||| ||||||||||||||| Sbjct: 150392 tcttcctgctgctgctgtgggggg 150415
>emb|AL360155.11| Human DNA sequence from clone RP11-721G11 on chromosome 6 Contains a pseudogene similar to part of KIAA1925, complete sequence Length = 107908 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 atgatcctggcctggatttt 165 |||||||||||||||||||| Sbjct: 46843 atgatcctggcctggatttt 46824
>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13 Length = 341957 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 catcgcgcaaagaaacgccg 322 |||||||||||||||||||| Sbjct: 94304 catcgcgcaaagaaacgccg 94285
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 gtgccggggcgcggcggttg 475 |||||||||||||||||||| Sbjct: 112702 gtgccggggcgcggcggttg 112683
>gb|BC052182.1| Mus musculus rhomboid 5 homolog 2 (Drosophila), mRNA (cDNA clone MGC:59517 IMAGE:6335022), complete cds Length = 3661 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 596 cggcggatgccggggcgcttctcggcgc 623 ||||||| ||||||||||||||| |||| Sbjct: 494 cggcggaagccggggcgcttctctgcgc 467
>ref|NM_172572.1| Mus musculus rhomboid 5 homolog 2 (Drosophila) (Rhbdf2), mRNA Length = 3856 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 596 cggcggatgccggggcgcttctcggcgc 623 ||||||| ||||||||||||||| |||| Sbjct: 761 cggcggaagccggggcgcttctctgcgc 734
>gb|AC027311.4| Homo sapiens chromosome 5 clone CTC-229B20, complete sequence Length = 119063 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 agcatctggatgagaaaaaa 439 |||||||||||||||||||| Sbjct: 107457 agcatctggatgagaaaaaa 107476
>dbj|AK154639.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630101N08 product:Epidermal growth factor receptor-related protein homolog, full insert sequence Length = 3622 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 596 cggcggatgccggggcgcttctcggcgc 623 ||||||| ||||||||||||||| |||| Sbjct: 515 cggcggaagccggggcgcttctctgcgc 488
>dbj|AK171085.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630222P06 product:Epidermal growth factor receptor-related protein (Fragment) homolog [Homo sapiens], full insert sequence Length = 2263 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 596 cggcggatgccggggcgcttctcggcgc 623 ||||||| ||||||||||||||| |||| Sbjct: 542 cggcggaagccggggcgcttctctgcgc 515
>dbj|AK028872.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732465I17 product:EPIDERMAL GROWTH FACTOR RECEPTOR-RELATED PROTEIN (FRAGMENT) homolog [Homo sapiens], full insert sequence Length = 3856 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 596 cggcggatgccggggcgcttctcggcgc 623 ||||||| ||||||||||||||| |||| Sbjct: 761 cggcggaagccggggcgcttctctgcgc 734
>gb|AC011365.5| Homo sapiens chromosome 5 clone CTC-558O2, complete sequence Length = 152723 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 agcatctggatgagaaaaaa 439 |||||||||||||||||||| Sbjct: 16482 agcatctggatgagaaaaaa 16501
>gb|AC128650.6| Homo sapiens 3 BAC RP11-373L8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 119990 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 cagcatctggatgagaaaaa 438 |||||||||||||||||||| Sbjct: 42430 cagcatctggatgagaaaaa 42411
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 554 tttatcttcctgatgctgct 573 |||||||||||||||||||| Sbjct: 1805549 tttatcttcctgatgctgct 1805530
>gb|AC160119.3| Mus musculus BAC clone RP23-431F16 from chromosome 9, complete sequence Length = 190900 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 409 ccataaaacacagcatctggatga 432 |||||||||||||||||| ||||| Sbjct: 121348 ccataaaacacagcatcttgatga 121325
>emb|BX004994.6| Zebrafish DNA sequence from clone DKEY-24J15 in linkage group 22, complete sequence Length = 211945 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gatgatcctggcctggattt 164 |||||||||||||||||||| Sbjct: 64234 gatgatcctggcctggattt 64253
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 gatgccggggcgcttctcgg 620 |||||||||||||||||||| Sbjct: 2273540 gatgccggggcgcttctcgg 2273559
>dbj|AB258381.1| Metarhizium anisopliae genes for DNA lyase, MAT1-1-3, MAT1-1-2, MAT1-1-1, partial and complete cds, strain: NBRC 32258 Length = 5356 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 atgagaaaaaagagctcggt 448 |||||||||||||||||||| Sbjct: 4926 atgagaaaaaagagctcggt 4907
>emb|AL607039.25| Mouse DNA sequence from clone RP23-313J14 on chromosome 11, complete sequence Length = 147376 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 596 cggcggatgccggggcgcttctcggcgc 623 ||||||| ||||||||||||||| |||| Sbjct: 33711 cggcggaagccggggcgcttctctgcgc 33738
>gb|AC146978.7| Mus musculus chromosome 7, clone RP24-217F6, complete sequence Length = 152682 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggatgatcctggcctggatt 163 |||||||||||||||||||| Sbjct: 89481 ggatgatcctggcctggatt 89500
>gb|AC167161.10| Mus musculus chromosome 7, clone RP23-367H8, complete sequence Length = 193612 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggatgatcctggcctggatt 163 |||||||||||||||||||| Sbjct: 123821 ggatgatcctggcctggatt 123840
>emb|AL671893.7| Mouse DNA sequence from clone RP23-170G19 on chromosome X, complete sequence Length = 175057 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 558 tcttcctgatgctgctgtgggggg 581 |||||||| ||||||||||||||| Sbjct: 25164 tcttcctgctgctgctgtgggggg 25141 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,769,106 Number of Sequences: 3902068 Number of extensions: 3769106 Number of successful extensions: 68834 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 67721 Number of HSP's gapped (non-prelim): 1102 length of query: 640 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 617 effective length of database: 17,143,297,704 effective search space: 10577414683368 effective search space used: 10577414683368 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
