| Clone Name | bags19m22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY347533.1| Triticum aestivum cultivar LI ribosomal protein L3 (RPL3) mRNA, RPL3-B3 allele, complete cds Length = 1170 Score = 264 bits (133), Expect = 7e-68 Identities = 145/149 (97%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 381 gaaggccttcaccaagtatgctctgaagtatgacagtgatgctggcaagaaagaaatcca 440 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgttattgcccataccca 120 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 441 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgttatcgcccataccca 500 Query: 121 gatcaggaagatgaaggggctgaagcaga 149 |||||||||||||||||| ||||||||| Sbjct: 501 gatcaggaagatgaagggtttgaagcaga 529
>gb|AY347532.1| Triticum aestivum cultivar Falat ribosomal protein L3 (RPL3) mRNA, RPL3-B3 allele, complete cds Length = 1170 Score = 264 bits (133), Expect = 7e-68 Identities = 145/149 (97%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 381 gaaggccttcaccaagtatgctctgaagtatgacagtgatgctggcaagaaagaaatcca 440 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgttattgcccataccca 120 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 441 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgttatcgcccataccca 500 Query: 121 gatcaggaagatgaaggggctgaagcaga 149 |||||||||||||||||| ||||||||| Sbjct: 501 gatcaggaagatgaagggtttgaagcaga 529
>dbj|AK060925.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-H11, full insert sequence Length = 1468 Score = 176 bits (89), Expect = 1e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 |||||| ||||| |||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 444 gaaggctttcactaagtatgcccttaagtatgacagtgatgctggcaagaaagaaatcca 503 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgttattgcccataccca 120 |||||| |||||||||||||||||||| || || |||| |||||||||||||| || || Sbjct: 504 gatgcaacttgagaagatgaagaagtacgcatctattgttcgtgttattgcccacactca 563 Query: 121 gatcaggaagatgaaggggctgaagcaga 149 |||||| ||||||||||| ||||||||| Sbjct: 564 gatcagaaagatgaagggcttgaagcaga 592
>dbj|D12630.1|RICRPL3A Oryza sativa (japonica cultivar-group) mRNA for ribosomal protein L3, complete cds Length = 1368 Score = 176 bits (89), Expect = 1e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 |||||| ||||| |||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 402 gaaggctttcactaagtatgcccttaagtatgacagtgatgctggcaagaaagaaatcca 461 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgttattgcccataccca 120 |||||| |||||||||||||||||||| || || |||| |||||||||||||| || || Sbjct: 462 gatgcaacttgagaagatgaagaagtacgcatctattgttcgtgttattgcccacactca 521 Query: 121 gatcaggaagatgaaggggctgaagcaga 149 |||||| ||||||||||| ||||||||| Sbjct: 522 gatcagaaagatgaagggcttgaagcaga 550
>dbj|D38597.1|RICRPB Oryza sativa mRNA, partial homologous to ribosomal protein coding sequence Length = 447 Score = 170 bits (86), Expect = 7e-40 Identities = 125/138 (90%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 |||||| ||||| |||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 85 gaaggctttcactaagtatgcccttaagtatgacagtgatgctggcaagaaagaaatcca 144 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgttattgcccataccca 120 |||||| |||||||||||||||||||| || || |||| |||||||||||||| || || Sbjct: 145 gatgcaacttgagaagatgaagaagtacgcatctattgttcgtgttattgcccacactca 204 Query: 121 gatcaggaagatgaaggg 138 |||||| ||||||||||| Sbjct: 205 gatcagaaagatgaaggg 222
>gb|AY343330.1| Triticum aestivum ribosomal protein L3 (RPL3) mRNA, RPL3-A1 allele, complete cds Length = 1170 Score = 163 bits (82), Expect = 2e-37 Identities = 124/138 (89%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 |||||| ||||| |||||||| || ||||||||||||||||| |||||||| |||||||| Sbjct: 381 gaaggcgttcacaaagtatgccctcaagtatgacagtgatgcaggcaagaaggaaatcca 440 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgttattgcccataccca 120 | ||||||||||||| ||||||||||| || ||| | |||||||||||||||||||| || Sbjct: 441 gttgcagcttgagaaaatgaagaagtacgccactatagtccgtgttattgcccatactca 500 Query: 121 gatcaggaagatgaaggg 138 ||| |||||||||||||| Sbjct: 501 gattaggaagatgaaggg 518
>gb|AY343327.1| Triticum aestivum ribosomal protein L3 (RPL3) mRNA, RPL3-A1 allele, complete cds Length = 1170 Score = 163 bits (82), Expect = 2e-37 Identities = 124/138 (89%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 |||||| ||||| |||||||| || ||||||||||||||||| |||||||| |||||||| Sbjct: 381 gaaggcgttcacaaagtatgccctcaagtatgacagtgatgcaggcaagaaggaaatcca 440 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgttattgcccataccca 120 | ||||||||||||| ||||||||||| || ||| | |||||||||||||||||||| || Sbjct: 441 gttgcagcttgagaaaatgaagaagtacgccactatagtccgtgttattgcccatactca 500 Query: 121 gatcaggaagatgaaggg 138 ||| |||||||||||||| Sbjct: 501 gattaggaagatgaaggg 518
>gb|AY347531.1| Triticum aestivum cultivar Falat ribosomal protein L3 (RPL3) mRNA, RPL3-A2 allele, complete cds Length = 1170 Score = 155 bits (78), Expect = 4e-35 Identities = 123/138 (89%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 |||||| ||||| |||||||| || ||||||||||||||| | || ||||| |||||||| Sbjct: 381 gaaggcgttcacaaagtatgccctcaagtatgacagtgattcaggaaagaaggaaatcca 440 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgttattgcccataccca 120 | ||||||||||||| ||||||||||| || ||| |||||||||||||||||||||| || Sbjct: 441 gttgcagcttgagaaaatgaagaagtacgccactattgtccgtgttattgcccatactca 500 Query: 121 gatcaggaagatgaaggg 138 ||| |||||||||||||| Sbjct: 501 gattaggaagatgaaggg 518
>gb|AY343328.1| Triticum aestivum ribosomal protein L3 (RPL3) mRNA, RPL3-A2 allele, complete cds Length = 1170 Score = 155 bits (78), Expect = 4e-35 Identities = 123/138 (89%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 |||||| ||||| |||||||| || ||||||||||||||| | || ||||| |||||||| Sbjct: 381 gaaggcgttcacaaagtatgccctcaagtatgacagtgattcaggaaagaaggaaatcca 440 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgttattgcccataccca 120 | ||||||||||||| ||||||||||| || ||| |||||||||||||||||||||| || Sbjct: 441 gttgcagcttgagaaaatgaagaagtacgccactattgtccgtgttattgcccatactca 500 Query: 121 gatcaggaagatgaaggg 138 ||| |||||||||||||| Sbjct: 501 gattaggaagatgaaggg 518
>gb|BT016630.1| Zea mays clone Contig463 mRNA sequence Length = 1432 Score = 153 bits (77), Expect = 2e-34 Identities = 131/149 (87%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 |||||| ||||| |||||||| || || ||||| | ||||||||||||||| ||||| || Sbjct: 442 gaaggctttcacaaagtatgctctcaaatatgaaaatgatgctggcaagaaggaaattca 501 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgttattgcccataccca 120 | |||||||||||||||||||||| |||||| ||||| ||||||| ||||| |||||||| Sbjct: 502 gctgcagcttgagaagatgaagaaatatgcttctgttatccgtgtcattgctcataccca 561 Query: 121 gatcaggaagatgaaggggctgaagcaga 149 ||| |||||||||||||| ||||||||| Sbjct: 562 gattaggaagatgaagggtttgaagcaga 590
>gb|BT017815.1| Zea mays clone EL01N0507E03.c mRNA sequence Length = 1343 Score = 153 bits (77), Expect = 2e-34 Identities = 131/149 (87%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 |||||| ||||| |||||||| || || ||||| | ||||||||||||||| ||||| || Sbjct: 349 gaaggctttcacaaagtatgctctcaaatatgaaaatgatgctggcaagaaggaaattca 408 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgttattgcccataccca 120 | |||||||||||||||||||||| |||||| ||||| ||||||| ||||| |||||||| Sbjct: 409 gctgcagcttgagaagatgaagaaatatgcttctgttatccgtgtcattgctcataccca 468 Query: 121 gatcaggaagatgaaggggctgaagcaga 149 ||| |||||||||||||| ||||||||| Sbjct: 469 gattaggaagatgaagggtttgaagcaga 497
>gb|AY103608.1| Zea mays PCO139614 mRNA sequence Length = 1714 Score = 153 bits (77), Expect = 2e-34 Identities = 131/149 (87%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 |||||| ||||| |||||||| || || ||||| | ||||||||||||||| ||||| || Sbjct: 506 gaaggctttcacaaagtatgctctcaaatatgaaaatgatgctggcaagaaggaaattca 565 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgttattgcccataccca 120 | |||||||||||||||||||||| |||||| ||||| ||||||| ||||| |||||||| Sbjct: 566 gctgcagcttgagaagatgaagaaatatgcttctgttatccgtgtcattgctcataccca 625 Query: 121 gatcaggaagatgaaggggctgaagcaga 149 ||| |||||||||||||| ||||||||| Sbjct: 626 gattaggaagatgaagggtttgaagcaga 654
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 147 bits (74), Expect = 1e-32 Identities = 104/114 (91%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 |||||| ||||| |||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 3429618 gaaggctttcactaagtatgcccttaagtatgacagtgatgctggcaagaaagaaatcca 3429677 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgttattgccca 114 |||||| |||||||||||||||||||| || || |||| |||||||||||||| Sbjct: 3429678 gatgcaacttgagaagatgaagaagtacgcatctattgttcgtgttattgccca 3429731 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 agaagatgaagaagtatgct 91 |||||||||||||||||||| Sbjct: 9840255 agaagatgaagaagtatgct 9840236 Score = 38.2 bits (19), Expect = 7.2 Identities = 28/31 (90%) Strand = Plus / Plus Query: 119 cagatcaggaagatgaaggggctgaagcaga 149 |||||||| ||||||||||| ||||||||| Sbjct: 3429818 cagatcagaaagatgaagggcttgaagcaga 3429848
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 147 bits (74), Expect = 1e-32 Identities = 104/114 (91%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 |||||| ||||| |||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 3429559 gaaggctttcactaagtatgcccttaagtatgacagtgatgctggcaagaaagaaatcca 3429618 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgttattgccca 114 |||||| |||||||||||||||||||| || || |||| |||||||||||||| Sbjct: 3429619 gatgcaacttgagaagatgaagaagtacgcatctattgttcgtgttattgccca 3429672 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 agaagatgaagaagtatgct 91 |||||||||||||||||||| Sbjct: 9840140 agaagatgaagaagtatgct 9840121 Score = 38.2 bits (19), Expect = 7.2 Identities = 28/31 (90%) Strand = Plus / Plus Query: 119 cagatcaggaagatgaaggggctgaagcaga 149 |||||||| ||||||||||| ||||||||| Sbjct: 3429759 cagatcagaaagatgaagggcttgaagcaga 3429789
>emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494_F10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 116371 Score = 147 bits (74), Expect = 1e-32 Identities = 104/114 (91%) Strand = Plus / Minus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 |||||| ||||| |||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 102301 gaaggctttcactaagtatgcccttaagtatgacagtgatgctggcaagaaagaaatcca 102242 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgttattgccca 114 |||||| |||||||||||||||||||| || || |||| |||||||||||||| Sbjct: 102241 gatgcaacttgagaagatgaagaagtacgcatctattgttcgtgttattgccca 102188 Score = 38.2 bits (19), Expect = 7.2 Identities = 28/31 (90%) Strand = Plus / Minus Query: 119 cagatcaggaagatgaaggggctgaagcaga 149 |||||||| ||||||||||| ||||||||| Sbjct: 102101 cagatcagaaagatgaagggcttgaagcaga 102071
>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137936 Score = 147 bits (74), Expect = 1e-32 Identities = 104/114 (91%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 |||||| ||||| |||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 108671 gaaggctttcactaagtatgcccttaagtatgacagtgatgctggcaagaaagaaatcca 108730 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgttattgccca 114 |||||| |||||||||||||||||||| || || |||| |||||||||||||| Sbjct: 108731 gatgcaacttgagaagatgaagaagtacgcatctattgttcgtgttattgccca 108784 Score = 38.2 bits (19), Expect = 7.2 Identities = 28/31 (90%) Strand = Plus / Plus Query: 119 cagatcaggaagatgaaggggctgaagcaga 149 |||||||| ||||||||||| ||||||||| Sbjct: 108871 cagatcagaaagatgaagggcttgaagcaga 108901
>gb|AY236158.1| Oryza sativa (indica cultivar-group) ribosomal protein L3B mRNA, partial cds Length = 1035 Score = 145 bits (73), Expect = 4e-32 Identities = 130/149 (87%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 |||||| |||||||||||||| || |||||||| || ||||| |||||||| |||||||| Sbjct: 348 gaaggctttcaccaagtatgctctcaagtatgatagcgatgccggcaagaaggaaatcca 407 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgttattgcccataccca 120 |||||||||||||||||||||||||||||| ||||||||||||| || | || || || Sbjct: 408 aatgcagcttgagaagatgaagaagtatgcttctgttgtccgtgtgatcgtgcacactca 467 Query: 121 gatcaggaagatgaaggggctgaagcaga 149 ||| ||||| |||||||| ||||||||| Sbjct: 468 gattaggaaaatgaagggcttgaagcaga 496
>dbj|AK101469.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040J04, full insert sequence Length = 1403 Score = 145 bits (73), Expect = 4e-32 Identities = 130/149 (87%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 |||||| |||||||||||||| || |||||||| || ||||| |||||||| |||||||| Sbjct: 457 gaaggctttcaccaagtatgctctcaagtatgatagcgatgccggcaagaaggaaatcca 516 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgttattgcccataccca 120 |||||||||||||||||||||||||||||| ||||||||||||| || | || || || Sbjct: 517 aatgcagcttgagaagatgaagaagtatgcttctgttgtccgtgtgatcgtgcacactca 576 Query: 121 gatcaggaagatgaaggggctgaagcaga 149 ||| ||||| |||||||| ||||||||| Sbjct: 577 gattaggaaaatgaagggcttgaagcaga 605
>dbj|AK099225.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094A07, full insert sequence Length = 1433 Score = 145 bits (73), Expect = 4e-32 Identities = 130/149 (87%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 |||||| |||||||||||||| || |||||||| || ||||| |||||||| |||||||| Sbjct: 435 gaaggctttcaccaagtatgctctcaagtatgatagcgatgccggcaagaaggaaatcca 494 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgttattgcccataccca 120 |||||||||||||||||||||||||||||| ||||||||||||| || | || || || Sbjct: 495 aatgcagcttgagaagatgaagaagtatgcttctgttgtccgtgtgatcgtgcacactca 554 Query: 121 gatcaggaagatgaaggggctgaagcaga 149 ||| ||||| |||||||| ||||||||| Sbjct: 555 gattaggaaaatgaagggcttgaagcaga 583
>dbj|AK073392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041E13, full insert sequence Length = 1486 Score = 145 bits (73), Expect = 4e-32 Identities = 130/149 (87%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 |||||| |||||||||||||| || |||||||| || ||||| |||||||| |||||||| Sbjct: 474 gaaggctttcaccaagtatgctctcaagtatgatagcgatgccggcaagaaggaaatcca 533 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgttattgcccataccca 120 |||||||||||||||||||||||||||||| ||||||||||||| || | || || || Sbjct: 534 aatgcagcttgagaagatgaagaagtatgcttctgttgtccgtgtgatcgtgcacactca 593 Query: 121 gatcaggaagatgaaggggctgaagcaga 149 ||| ||||| |||||||| ||||||||| Sbjct: 594 gattaggaaaatgaagggcttgaagcaga 622
>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0011J22 map R10571S, complete sequence Length = 154441 Score = 137 bits (69), Expect = 1e-29 Identities = 96/105 (91%) Strand = Plus / Minus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 |||||| |||||||||||||| || |||||||| || ||||| |||||||| |||||||| Sbjct: 38822 gaaggctttcaccaagtatgctctcaagtatgatagcgatgccggcaagaaggaaatcca 38763 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgt 105 |||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 38762 aatgcagcttgagaagatgaagaagtatgcttctgttgtccgtgt 38718
>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23 map near R10571S, complete sequence Length = 161073 Score = 137 bits (69), Expect = 1e-29 Identities = 96/105 (91%) Strand = Plus / Minus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 |||||| |||||||||||||| || |||||||| || ||||| |||||||| |||||||| Sbjct: 138123 gaaggctttcaccaagtatgctctcaagtatgatagcgatgccggcaagaaggaaatcca 138064 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgt 105 |||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 138063 aatgcagcttgagaagatgaagaagtatgcttctgttgtccgtgt 138019
>gb|AY257863.1| Oryza sativa (japonica cultivar-group) chromosome 11 genomic sequence Length = 42748 Score = 137 bits (69), Expect = 1e-29 Identities = 96/105 (91%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 |||||| |||||||||||||| || |||||||| || ||||| |||||||| |||||||| Sbjct: 30378 gaaggctttcaccaagtatgctctcaagtatgatagcgatgccggcaagaaggaaatcca 30437 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgt 105 |||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 30438 aatgcagcttgagaagatgaagaagtatgcttctgttgtccgtgt 30482
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 137 bits (69), Expect = 1e-29 Identities = 96/105 (91%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 |||||| |||||||||||||| || |||||||| || ||||| |||||||| |||||||| Sbjct: 3276163 gaaggctttcaccaagtatgctctcaagtatgatagcgatgccggcaagaaggaaatcca 3276222 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgt 105 |||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 3276223 aatgcagcttgagaagatgaagaagtatgcttctgttgtccgtgt 3276267 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 71 gagaagatgaagaagtatg 89 ||||||||||||||||||| Sbjct: 16279166 gagaagatgaagaagtatg 16279148
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 137 bits (69), Expect = 1e-29 Identities = 96/105 (91%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 |||||| |||||||||||||| || |||||||| || ||||| |||||||| |||||||| Sbjct: 3284876 gaaggctttcaccaagtatgctctcaagtatgatagcgatgccggcaagaaggaaatcca 3284935 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgt 105 |||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 3284936 aatgcagcttgagaagatgaagaagtatgcttctgttgtccgtgt 3284980 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 71 gagaagatgaagaagtatg 89 ||||||||||||||||||| Sbjct: 16369145 gagaagatgaagaagtatg 16369127
>dbj|D21299.1|RICSS498 Oryza sativa SS498 mRNA for ribosomal protein, partial sequence Length = 308 Score = 131 bits (66), Expect = 6e-28 Identities = 128/149 (85%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgcgctgaagtatgacagtgatgctggcaagaaagaaatcca 60 |||||| |||||||||||||| || |||||||| || ||||| |||||||| |||||||| Sbjct: 88 gaaggctttcaccaagtatgctctcaagtatgatagcgatgccggcaagaaggaaatcca 147 Query: 61 gatgcagcttgagaagatgaagaagtatgctactgttgtccgtgttattgcccataccca 120 |||||||||||||||||||||||||||||| || |||||||||| || | || || || Sbjct: 148 aatgcagcttgagaagatgaagaagtatgcttcttttgtccgtgtgatcgtgcacactca 207 Query: 121 gatcaggaagatgaaggggctgaagcaga 149 ||| ||||| || ||||| ||||||||| Sbjct: 208 gattaggaaaatnaagggcttgaagcaga 236
>ref|NM_001036069.1| Arabidopsis thaliana ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); structural constituent of ribosome AT1G43170 (ARP1) transcript variant AT1G43170.3 mRNA, complete cds Length = 1447 Score = 93.7 bits (47), Expect = 1e-16 Identities = 104/123 (84%) Strand = Plus / Plus Query: 27 agtatgacagtgatgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagt 86 ||||||||||||| | ||||||||| | || ||| |||||||||||||||||||||| Sbjct: 445 agtatgacagtgaggatggcaagaagggtattcaggctcagcttgagaagatgaagaagt 504 Query: 87 atgctactgttgtccgtgttattgcccatacccagatcaggaagatgaaggggctgaagc 146 | |||||||| |||||||| | || || || |||||||||||||||||||| |||||| Sbjct: 505 acgctactgtcatccgtgttttggctcacactcagatcaggaagatgaagggattgaagc 564 Query: 147 aga 149 ||| Sbjct: 565 aga 567
>ref|NM_202237.1| Arabidopsis thaliana ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); structural constituent of ribosome AT1G43170 (ARP1) transcript variant AT1G43170.2 mRNA, complete cds Length = 1449 Score = 93.7 bits (47), Expect = 1e-16 Identities = 104/123 (84%) Strand = Plus / Plus Query: 27 agtatgacagtgatgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagt 86 ||||||||||||| | ||||||||| | || ||| |||||||||||||||||||||| Sbjct: 447 agtatgacagtgaggatggcaagaagggtattcaggctcagcttgagaagatgaagaagt 506 Query: 87 atgctactgttgtccgtgttattgcccatacccagatcaggaagatgaaggggctgaagc 146 | |||||||| |||||||| | || || || |||||||||||||||||||| |||||| Sbjct: 507 acgctactgtcatccgtgttttggctcacactcagatcaggaagatgaagggattgaagc 566 Query: 147 aga 149 ||| Sbjct: 567 aga 569
>ref|NM_103469.2| Arabidopsis thaliana ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); structural constituent of ribosome AT1G43170 (ARP1) transcript variant AT1G43170.1 mRNA, complete cds Length = 1483 Score = 93.7 bits (47), Expect = 1e-16 Identities = 104/123 (84%) Strand = Plus / Plus Query: 27 agtatgacagtgatgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagt 86 ||||||||||||| | ||||||||| | || ||| |||||||||||||||||||||| Sbjct: 481 agtatgacagtgaggatggcaagaagggtattcaggctcagcttgagaagatgaagaagt 540 Query: 87 atgctactgttgtccgtgttattgcccatacccagatcaggaagatgaaggggctgaagc 146 | |||||||| |||||||| | || || || |||||||||||||||||||| |||||| Sbjct: 541 acgctactgtcatccgtgttttggctcacactcagatcaggaagatgaagggattgaagc 600 Query: 147 aga 149 ||| Sbjct: 601 aga 603
>gb|BT000756.1| Arabidopsis thaliana clone RAFL09-59-D03 (R18985) putative ribosomal protein (At1g43170) mRNA, complete cds Length = 1452 Score = 93.7 bits (47), Expect = 1e-16 Identities = 104/123 (84%) Strand = Plus / Plus Query: 27 agtatgacagtgatgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagt 86 ||||||||||||| | ||||||||| | || ||| |||||||||||||||||||||| Sbjct: 468 agtatgacagtgaggatggcaagaagggtattcaggctcagcttgagaagatgaagaagt 527 Query: 87 atgctactgttgtccgtgttattgcccatacccagatcaggaagatgaaggggctgaagc 146 | |||||||| |||||||| | || || || |||||||||||||||||||| |||||| Sbjct: 528 acgctactgtcatccgtgttttggctcacactcagatcaggaagatgaagggattgaagc 587 Query: 147 aga 149 ||| Sbjct: 588 aga 590
>gb|AF361101.1| Arabidopsis thaliana putative ribosomal protein (At1g43170) mRNA, complete cds Length = 1220 Score = 93.7 bits (47), Expect = 1e-16 Identities = 104/123 (84%) Strand = Plus / Plus Query: 27 agtatgacagtgatgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagt 86 ||||||||||||| | ||||||||| | || ||| |||||||||||||||||||||| Sbjct: 407 agtatgacagtgaggatggcaagaagggtattcaggctcagcttgagaagatgaagaagt 466 Query: 87 atgctactgttgtccgtgttattgcccatacccagatcaggaagatgaaggggctgaagc 146 | |||||||| |||||||| | || || || |||||||||||||||||||| |||||| Sbjct: 467 acgctactgtcatccgtgttttggctcacactcagatcaggaagatgaagggattgaagc 526 Query: 147 aga 149 ||| Sbjct: 527 aga 529
>gb|AF327421.1| Arabidopsis thaliana putative ribosomal protein (At1g43170) mRNA, complete cds Length = 1456 Score = 93.7 bits (47), Expect = 1e-16 Identities = 104/123 (84%) Strand = Plus / Plus Query: 27 agtatgacagtgatgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagt 86 ||||||||||||| | ||||||||| | || ||| |||||||||||||||||||||| Sbjct: 470 agtatgacagtgaggatggcaagaagggtattcaggctcagcttgagaagatgaagaagt 529 Query: 87 atgctactgttgtccgtgttattgcccatacccagatcaggaagatgaaggggctgaagc 146 | |||||||| |||||||| | || || || |||||||||||||||||||| |||||| Sbjct: 530 acgctactgtcatccgtgttttggctcacactcagatcaggaagatgaagggattgaagc 589 Query: 147 aga 149 ||| Sbjct: 590 aga 592
>gb|AF361809.1| Arabidopsis thaliana At1g43170/F1I21_18 mRNA, complete cds Length = 1380 Score = 93.7 bits (47), Expect = 1e-16 Identities = 104/123 (84%) Strand = Plus / Plus Query: 27 agtatgacagtgatgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagt 86 ||||||||||||| | ||||||||| | || ||| |||||||||||||||||||||| Sbjct: 466 agtatgacagtgaggatggcaagaagggtattcaggctcagcttgagaagatgaagaagt 525 Query: 87 atgctactgttgtccgtgttattgcccatacccagatcaggaagatgaaggggctgaagc 146 | |||||||| |||||||| | || || || |||||||||||||||||||| |||||| Sbjct: 526 acgctactgtcatccgtgttttggctcacactcagatcaggaagatgaagggattgaagc 585 Query: 147 aga 149 ||| Sbjct: 586 aga 588
>gb|AY057487.1| Arabidopsis thaliana At1g43170/F1I21_18 mRNA, complete cds Length = 1361 Score = 93.7 bits (47), Expect = 1e-16 Identities = 104/123 (84%) Strand = Plus / Plus Query: 27 agtatgacagtgatgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagt 86 ||||||||||||| | ||||||||| | || ||| |||||||||||||||||||||| Sbjct: 464 agtatgacagtgaggatggcaagaagggtattcaggctcagcttgagaagatgaagaagt 523 Query: 87 atgctactgttgtccgtgttattgcccatacccagatcaggaagatgaaggggctgaagc 146 | |||||||| |||||||| | || || || |||||||||||||||||||| |||||| Sbjct: 524 acgctactgtcatccgtgttttggctcacactcagatcaggaagatgaagggattgaagc 583 Query: 147 aga 149 ||| Sbjct: 584 aga 586
>gb|AY052743.1| Arabidopsis thaliana At1g43170/F1I21_18 mRNA, complete cds Length = 1170 Score = 93.7 bits (47), Expect = 1e-16 Identities = 104/123 (84%) Strand = Plus / Plus Query: 27 agtatgacagtgatgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagt 86 ||||||||||||| | ||||||||| | || ||| |||||||||||||||||||||| Sbjct: 407 agtatgacagtgaggatggcaagaagggtattcaggctcagcttgagaagatgaagaagt 466 Query: 87 atgctactgttgtccgtgttattgcccatacccagatcaggaagatgaaggggctgaagc 146 | |||||||| |||||||| | || || || |||||||||||||||||||| |||||| Sbjct: 467 acgctactgtcatccgtgttttggctcacactcagatcaggaagatgaagggattgaagc 526 Query: 147 aga 149 ||| Sbjct: 527 aga 529
>gb|AY039544.1| Arabidopsis thaliana At1g43170/F1I21_18 mRNA, complete cds Length = 1440 Score = 93.7 bits (47), Expect = 1e-16 Identities = 104/123 (84%) Strand = Plus / Plus Query: 27 agtatgacagtgatgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagt 86 ||||||||||||| | ||||||||| | || ||| |||||||||||||||||||||| Sbjct: 470 agtatgacagtgaggatggcaagaagggtattcaggctcagcttgagaagatgaagaagt 529 Query: 87 atgctactgttgtccgtgttattgcccatacccagatcaggaagatgaaggggctgaagc 146 | |||||||| |||||||| | || || || |||||||||||||||||||| |||||| Sbjct: 530 acgctactgtcatccgtgttttggctcacactcagatcaggaagatgaagggattgaagc 589 Query: 147 aga 149 ||| Sbjct: 590 aga 592
>gb|AY089000.1| Arabidopsis thaliana clone 14534 mRNA, complete sequence Length = 1389 Score = 93.7 bits (47), Expect = 1e-16 Identities = 104/123 (84%) Strand = Plus / Plus Query: 27 agtatgacagtgatgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagt 86 ||||||||||||| | ||||||||| | || ||| |||||||||||||||||||||| Sbjct: 467 agtatgacagtgaggatggcaagaagggtattcaggctcagcttgagaagatgaagaagt 526 Query: 87 atgctactgttgtccgtgttattgcccatacccagatcaggaagatgaaggggctgaagc 146 | |||||||| |||||||| | || || || |||||||||||||||||||| |||||| Sbjct: 527 acgctactgtcatccgtgttttggctcacactcagatcaggaagatgaagggattgaagc 586 Query: 147 aga 149 ||| Sbjct: 587 aga 589
>emb|AJ248327.1|MSA248327 Medicago sativa subsp. X varia mRNA for L3 Ribosomal protein Length = 1201 Score = 79.8 bits (40), Expect = 2e-12 Identities = 94/112 (83%) Strand = Plus / Plus Query: 27 agtatgacagtgatgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagt 86 ||||||| ||||||| || |||||| | ||||||| ||||||||||| ||||||||| Sbjct: 428 agtatgaaagtgatgaggggaagaaaaacatccagacccagcttgagaaactgaagaagt 487 Query: 87 atgctactgttgtccgtgttattgcccatacccagatcaggaagatgaaggg 138 |||| |||||| ||||||| | || || |||||||||||||| |||||||| Sbjct: 488 atgcaactgttatccgtgtcttggctcacacccagatcaggaaaatgaaggg 539
>gb|M32654.1|ATHRPCA Arabidopsis thaliana cytoplasmic ribosomal protein mRNA, complete cds Length = 1462 Score = 77.8 bits (39), Expect = 8e-12 Identities = 102/123 (82%) Strand = Plus / Plus Query: 27 agtatgacagtgatgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagt 86 ||||||||||||| | ||||||||| | || ||| ||||||||||| ||||||||| Sbjct: 440 agtatgacagtgaggatggcaagaagggtattcaggctcagcttgagaaagtgaagaagt 499 Query: 87 atgctactgttgtccgtgttattgcccatacccagatcaggaagatgaaggggctgaagc 146 | |||||||| |||||||| | || || || |||||||||||||||||||| |||||| Sbjct: 500 acgctactgtcatccgtgttttggctcacactcagatcaggaagatgaagggattgaagc 559 Query: 147 aga 149 ||| Sbjct: 560 aga 562
>gb|AC005687.1| Arabidopsis thaliana BAC F1I21 from chromosome 1, near 59 cM, complete sequence Length = 129271 Score = 63.9 bits (32), Expect = 1e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 27 agtatgacagtgatgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagt 86 ||||||||||||| | ||||||||| | || ||| |||||||||||||||||||||| Sbjct: 39682 agtatgacagtgaggatggcaagaagggtattcaggctcagcttgagaagatgaagaagt 39741 Query: 87 atgctactgttgtccgtgtt 106 | |||||||| |||||||| Sbjct: 39742 acgctactgtcatccgtgtt 39761 Score = 46.1 bits (23), Expect = 0.029 Identities = 29/31 (93%) Strand = Plus / Plus Query: 119 cagatcaggaagatgaaggggctgaagcaga 149 |||||||||||||||||||| ||||||||| Sbjct: 39862 cagatcaggaagatgaagggattgaagcaga 39892
>emb|AJ606030.1| Triticum aestivum partial mRNA for putative ribosomal protein (rpl3 gene) Length = 297 Score = 63.9 bits (32), Expect = 1e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 110 gcccatacccagatcaggaagatgaaggggctgaagcaga 149 ||||||||||||||||||||||||||||| ||||||||| Sbjct: 6 gcccatacccagatcaggaagatgaagggattgaagcaga 45
>gb|AY389725.1| Hyacinthus orientalis ribosomal protein L3 mRNA, partial cds Length = 875 Score = 60.0 bits (30), Expect = 2e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 37 tgatgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagtatgctactgt 96 ||||| ||| ||||| || ||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 44 tgatgatgggaagaaggagatccagacccagcttgacaagatgaagaaatatgctactgt 103 Query: 97 tgtccgtgttattgcccatacccagatcaggaagatgaaggg 138 ||||||| | || || || ||| | |||||||||||||| Sbjct: 104 catccgtgtgctggcacacacacagcttaggaagatgaaggg 145
>gb|AC150978.15| Medicago truncatula clone mth2-66m17, complete sequence Length = 125121 Score = 54.0 bits (27), Expect = 1e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 27 agtatgacagtgatgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagt 86 ||||||| ||||||| || |||||| | || |||| ||||||||||| ||||||||| Sbjct: 7704 agtatgaaagtgatgaggggaagaaaaacattcagacccagcttgagaaactgaagaagt 7763 Query: 87 atgctactgttgtccgtgt 105 |||| |||||| ||||||| Sbjct: 7764 atgcaactgttatccgtgt 7782 Score = 38.2 bits (19), Expect = 7.2 Identities = 28/31 (90%) Strand = Plus / Plus Query: 119 cagatcaggaagatgaaggggctgaagcaga 149 ||||||||||| |||||||| ||||||||| Sbjct: 8514 cagatcaggaaaatgaagggtttgaagcaga 8544
>gb|AC125473.12| Medicago truncatula clone mth2-8j13, complete sequence Length = 103966 Score = 54.0 bits (27), Expect = 1e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 27 agtatgacagtgatgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagt 86 ||||||| ||||||| || |||||| | || |||| ||||||||||| ||||||||| Sbjct: 1655 agtatgaaagtgatgaggggaagaaaaacattcagacccagcttgagaaactgaagaagt 1596 Query: 87 atgctactgttgtccgtgt 105 |||| |||||| ||||||| Sbjct: 1595 atgcaactgttatccgtgt 1577 Score = 38.2 bits (19), Expect = 7.2 Identities = 28/31 (90%) Strand = Plus / Minus Query: 119 cagatcaggaagatgaaggggctgaagcaga 149 ||||||||||| |||||||| ||||||||| Sbjct: 845 cagatcaggaaaatgaagggtttgaagcaga 815
>gb|AC126014.6| Medicago truncatula clone mth2-18j5, complete sequence Length = 113200 Score = 54.0 bits (27), Expect = 1e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 27 agtatgacagtgatgctggcaagaaagaaatccagatgcagcttgagaagatgaagaagt 86 ||||||| ||||||| || |||||| | || |||| ||||||||||| ||||||||| Sbjct: 97984 agtatgaaagtgatgaggggaagaaaaacattcagacccagcttgagaaactgaagaagt 98043 Query: 87 atgctactgttgtccgtgt 105 |||| |||||| ||||||| Sbjct: 98044 atgcaactgttatccgtgt 98062 Score = 38.2 bits (19), Expect = 7.2 Identities = 28/31 (90%) Strand = Plus / Plus Query: 119 cagatcaggaagatgaaggggctgaagcaga 149 ||||||||||| |||||||| ||||||||| Sbjct: 98794 cagatcaggaaaatgaagggtttgaagcaga 98824
>dbj|AB008848.1| Cucumis sativus Csf-3 mRNA, complete cds Length = 911 Score = 52.0 bits (26), Expect = 5e-04 Identities = 68/82 (82%) Strand = Plus / Plus Query: 66 agcttgagaagatgaagaagtatgctactgttgtccgtgttattgcccatacccagatca 125 ||||||||||| ||||||| ||||| |||| |||||||| | || ||||| ||||||| Sbjct: 23 agcttgagaagctgaagaaatatgcatctgtgatccgtgttttggctcatactcagatca 82 Query: 126 ggaagatgaaggggctgaagca 147 ||||||||||| ||||||| Sbjct: 83 ccaagatgaagggattgaagca 104
>ref|NM_198418.1| Mus musculus tudor domain containing 6 (Tdrd6), mRNA Length = 7057 Score = 44.1 bits (22), Expect = 0.12 Identities = 22/22 (100%) Strand = Plus / Plus Query: 71 gagaagatgaagaagtatgcta 92 |||||||||||||||||||||| Sbjct: 5230 gagaagatgaagaagtatgcta 5251
>gb|AC154647.2| Mus musculus BAC clone RP23-283P8 from chromosome 17, complete sequence Length = 208252 Score = 44.1 bits (22), Expect = 0.12 Identities = 22/22 (100%) Strand = Plus / Minus Query: 71 gagaagatgaagaagtatgcta 92 |||||||||||||||||||||| Sbjct: 99257 gagaagatgaagaagtatgcta 99236
>ref|XM_910563.2| PREDICTED: Mus musculus tudor domain containing 6 (Tdrd6), mRNA Length = 6384 Score = 44.1 bits (22), Expect = 0.12 Identities = 22/22 (100%) Strand = Plus / Plus Query: 71 gagaagatgaagaagtatgcta 92 |||||||||||||||||||||| Sbjct: 5086 gagaagatgaagaagtatgcta 5107
>ref|XM_236991.3| PREDICTED: Rattus norvegicus tudor domain containing 6 (predicted) (Tdrd6_predicted), mRNA Length = 6786 Score = 44.1 bits (22), Expect = 0.12 Identities = 22/22 (100%) Strand = Plus / Plus Query: 71 gagaagatgaagaagtatgcta 92 |||||||||||||||||||||| Sbjct: 5494 gagaagatgaagaagtatgcta 5515
>dbj|AB097085.1| Mus musculus Tdrd6 mRNA for tudor domain containing 6 protein, complete cds Length = 7057 Score = 44.1 bits (22), Expect = 0.12 Identities = 22/22 (100%) Strand = Plus / Plus Query: 71 gagaagatgaagaagtatgcta 92 |||||||||||||||||||||| Sbjct: 5230 gagaagatgaagaagtatgcta 5251
>gb|AC024221.23| Homo sapiens 3 BAC RP11-227J5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 132953 Score = 42.1 bits (21), Expect = 0.46 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 gcaagaaagaaatccagatgc 65 ||||||||||||||||||||| Sbjct: 26706 gcaagaaagaaatccagatgc 26726
>dbj|AK025109.1| Homo sapiens cDNA: FLJ21456 fis, clone COL04704 Length = 2074 Score = 42.1 bits (21), Expect = 0.46 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 gcaagaaagaaatccagatgc 65 ||||||||||||||||||||| Sbjct: 181 gcaagaaagaaatccagatgc 161
>emb|CT033251.1| Platynereis dumerilii EST IB0AAA24AG04EM1 Length = 903 Score = 42.1 bits (21), Expect = 0.46 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgc 21 ||||||||||||||||||||| Sbjct: 403 gaaggccttcaccaagtatgc 423
>emb|CT033204.1| Platynereis dumerilii EST IB0AAA24DG07EM1 Length = 886 Score = 42.1 bits (21), Expect = 0.46 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgc 21 ||||||||||||||||||||| Sbjct: 405 gaaggccttcaccaagtatgc 425
>emb|CT032838.1| Platynereis dumerilii EST IB0AAA30CG08EM1 Length = 865 Score = 42.1 bits (21), Expect = 0.46 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgc 21 ||||||||||||||||||||| Sbjct: 412 gaaggccttcaccaagtatgc 432
>emb|CT032638.1| Platynereis dumerilii EST IB0AAA34CD10EM1 Length = 897 Score = 42.1 bits (21), Expect = 0.46 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgc 21 ||||||||||||||||||||| Sbjct: 395 gaaggccttcaccaagtatgc 415
>emb|CT032610.1| Platynereis dumerilii EST IB0AAA35BE08EM1 Length = 874 Score = 42.1 bits (21), Expect = 0.46 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 gaaggccttcaccaagtatgc 21 ||||||||||||||||||||| Sbjct: 404 gaaggccttcaccaagtatgc 424
>gb|DQ241849.1| Solanum tuberosum clone 187E04 ribosomal protein L3-like mRNA, complete cds Length = 1434 Score = 42.1 bits (21), Expect = 0.46 Identities = 69/85 (81%) Strand = Plus / Plus Query: 65 cagcttgagaagatgaagaagtatgctactgttgtccgtgttattgcccatacccagatc 124 ||||| ||||| |||||||||||||| ||| ||||||| | || || || ||||| Sbjct: 496 cagctggagaaattgaagaagtatgcttgtgtcatccgtgtgttggctcacactcagata 555 Query: 125 aggaagatgaaggggctgaagcaga 149 |||||||||||||| ||||| |||| Sbjct: 556 aggaagatgaagggtctgaaacaga 580
>ref|NM_104840.3| Arabidopsis thaliana ARP2/RPL3B; structural constituent of ribosome AT1G61580 (ARP2/RPL3B) mRNA, complete cds Length = 1343 Score = 40.1 bits (20), Expect = 1.8 Identities = 67/80 (83%), Gaps = 2/80 (2%) Strand = Plus / Plus Query: 71 gagaagatgaagaagta-tgctactgttgtccgtgttattgcccatacccagatcaggaa 129 ||||||||||||||||| |||| |||| || | ||| |||| || || ||||| ||||| Sbjct: 489 gagaagatgaagaagtactgct-ctgtcatcagagttcttgctcacactcagataaggaa 547 Query: 130 gatgaaggggctgaagcaga 149 ||||| ||||||||||||| Sbjct: 548 aatgaaagggctgaagcaga 567
>ref|NM_193425.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2295 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 agaagatgaagaagtatgct 91 |||||||||||||||||||| Sbjct: 1593 agaagatgaagaagtatgct 1612
>ref|XM_473615.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2298 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 agaagatgaagaagtatgct 91 |||||||||||||||||||| Sbjct: 1626 agaagatgaagaagtatgct 1645
>ref|XM_471464.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2214 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 agaagatgaagaagtatgct 91 |||||||||||||||||||| Sbjct: 1407 agaagatgaagaagtatgct 1426
>ref|XM_750106.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g08650) partial mRNA Length = 4854 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 acccagatcaggaagatgaa 135 |||||||||||||||||||| Sbjct: 4013 acccagatcaggaagatgaa 3994
>ref|XM_810523.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053504021.90) partial mRNA Length = 1803 Score = 40.1 bits (20), Expect = 1.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 gcagcttgagaagatgaagaagta 87 ||||| |||||||||||||||||| Sbjct: 1298 gcagcatgagaagatgaagaagta 1275
>ref|XM_786871.1| PREDICTED: Strongylocentrotus purpuratus similar to Anion exchange protein 3 (Neuronal band 3-like protein) (Cardiac/brain band 3-like protein) (CAE3/BAE3) (LOC587119), mRNA Length = 3944 Score = 40.1 bits (20), Expect = 1.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 atgcagcttgagaagatgaagaag 85 ||||||| |||||||||||||||| Sbjct: 2004 atgcagcatgagaagatgaagaag 2027
>ref|XM_787198.1| PREDICTED: Strongylocentrotus purpuratus similar to Anion exchange protein 3 (Neuronal band 3-like protein) (LOC587470), partial mRNA Length = 732 Score = 40.1 bits (20), Expect = 1.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 atgcagcttgagaagatgaagaag 85 ||||||| |||||||||||||||| Sbjct: 139 atgcagcatgagaagatgaagaag 162
>emb|AL606624.4|OSJN00058 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011J08, complete sequence Length = 157734 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 agaagatgaagaagtatgct 91 |||||||||||||||||||| Sbjct: 58241 agaagatgaagaagtatgct 58222
>emb|AJ306391.1|PYA306391 Paramyxine yangi mRNA for phosphoglucose isomerase (pgi gene) Length = 2123 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gcttgagaagatgaagaagt 86 |||||||||||||||||||| Sbjct: 509 gcttgagaagatgaagaagt 528
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 agaagatgaagaagtatgct 91 |||||||||||||||||||| Sbjct: 29148773 agaagatgaagaagtatgct 29148754 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 agaagatgaagaagtatgct 91 |||||||||||||||||||| Sbjct: 11154754 agaagatgaagaagtatgct 11154735
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 agaagatgaagaagtatgct 91 |||||||||||||||||||| Sbjct: 4024058 agaagatgaagaagtatgct 4024039
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 agaagatgaagaagtatgct 91 |||||||||||||||||||| Sbjct: 20792292 agaagatgaagaagtatgct 20792311 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 agaagatgaagaagtatgct 91 |||||||||||||||||||| Sbjct: 16445158 agaagatgaagaagtatgct 16445177 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 agaagatgaagaagtatgct 91 |||||||||||||||||||| Sbjct: 13065358 agaagatgaagaagtatgct 13065339 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 73 gaagatgaagaagtatgct 91 ||||||||||||||||||| Sbjct: 11147636 gaagatgaagaagtatgct 11147618 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 39 atgctggcaagaaagaaat 57 ||||||||||||||||||| Sbjct: 686308 atgctggcaagaaagaaat 686290
>gb|BT005702.1| Arabidopsis thaliana clone U20878 putative ribosomal protein (At1g61580) mRNA, complete cds Length = 1204 Score = 40.1 bits (20), Expect = 1.8 Identities = 67/80 (83%), Gaps = 2/80 (2%) Strand = Plus / Plus Query: 71 gagaagatgaagaagta-tgctactgttgtccgtgttattgcccatacccagatcaggaa 129 ||||||||||||||||| |||| |||| || | ||| |||| || || ||||| ||||| Sbjct: 451 gagaagatgaagaagtactgct-ctgtcatcagagttcttgctcacactcagataaggaa 509 Query: 130 gatgaaggggctgaagcaga 149 ||||| ||||||||||||| Sbjct: 510 aatgaaagggctgaagcaga 529
>dbj|AP003933.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0066C06 Length = 162304 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 agaagatgaagaagtatgct 91 |||||||||||||||||||| Sbjct: 135250 agaagatgaagaagtatgct 135269
>dbj|AP003902.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1110C07 Length = 173859 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 agaagatgaagaagtatgct 91 |||||||||||||||||||| Sbjct: 10734 agaagatgaagaagtatgct 10753
>gb|BT003869.1| Arabidopsis thaliana clone RAFL15-38-D07 (R20878) putative ribosomal protein (At1g61580) mRNA, complete cds Length = 1376 Score = 40.1 bits (20), Expect = 1.8 Identities = 67/80 (83%), Gaps = 2/80 (2%) Strand = Plus / Plus Query: 71 gagaagatgaagaagta-tgctactgttgtccgtgttattgcccatacccagatcaggaa 129 ||||||||||||||||| |||| |||| || | ||| |||| || || ||||| ||||| Sbjct: 495 gagaagatgaagaagtactgct-ctgtcatcagagttcttgctcacactcagataaggaa 553 Query: 130 gatgaaggggctgaagcaga 149 ||||| ||||||||||||| Sbjct: 554 aatgaaagggctgaagcaga 573
>dbj|AP004613.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1123_G09 Length = 107491 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 agaagatgaagaagtatgct 91 |||||||||||||||||||| Sbjct: 52755 agaagatgaagaagtatgct 52774
>dbj|AP003208.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1158F07 Length = 139491 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 agaagatgaagaagtatgct 91 |||||||||||||||||||| Sbjct: 41079 agaagatgaagaagtatgct 41060
>dbj|AP004320.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1008_F01 Length = 128472 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 agaagatgaagaagtatgct 91 |||||||||||||||||||| Sbjct: 104326 agaagatgaagaagtatgct 104307
>dbj|AP004560.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0462E11 Length = 166115 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 agaagatgaagaagtatgct 91 |||||||||||||||||||| Sbjct: 111355 agaagatgaagaagtatgct 111336
>dbj|AP005501.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0458D06 Length = 166038 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 agaagatgaagaagtatgct 91 |||||||||||||||||||| Sbjct: 17171 agaagatgaagaagtatgct 17152
>gb|AF039030.1|AF039030 Clostridium thermocellum cellulose 1,4-beta-cellobiosidase (celK) gene, complete cds Length = 4187 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aagaagtatgctactgttgt 99 |||||||||||||||||||| Sbjct: 1818 aagaagtatgctactgttgt 1837
>emb|AL731637.2|OSJN00278 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0115I09, complete sequence Length = 141580 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 agaagatgaagaagtatgct 91 |||||||||||||||||||| Sbjct: 23378 agaagatgaagaagtatgct 23359
>emb|AL954870.3|CNS08CD9 Oryza sativa chromosome 12, . BAC OSJNBb0112E17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 140806 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 agaagatgaagaagtatgct 91 |||||||||||||||||||| Sbjct: 92215 agaagatgaagaagtatgct 92234
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 3 aggccttcaccaagtatgcgctg 25 ||||||||||||| ||||||||| Sbjct: 3850572 aggccttcaccaaatatgcgctg 3850550
>ref|NM_001034810.1| Bos taurus similar to Methionine-R-sulfoxide reductase (Selenoprotein X 1) (MGC128294), mRNA Length = 1314 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 109 tgcccatacccagatcagg 127 ||||||||||||||||||| Sbjct: 460 tgcccatacccagatcagg 478
>ref|XM_462844.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2130 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 73 gaagatgaagaagtatgct 91 ||||||||||||||||||| Sbjct: 1459 gaagatgaagaagtatgct 1477
>ref|XM_864901.1| PREDICTED: Bos taurus similar to nuclear RNA export factor 2 (LOC613789), mRNA Length = 2539 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 128 aagatgaaggggctgaagc 146 ||||||||||||||||||| Sbjct: 1399 aagatgaaggggctgaagc 1417
>ref|XM_608246.2| PREDICTED: Bos taurus similar to CG5020-PA, isoform A (LOC529788), mRNA Length = 3991 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 59 cagatgcagcttgagaaga 77 ||||||||||||||||||| Sbjct: 1036 cagatgcagcttgagaaga 1054
>gb|AC114011.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078f20, complete sequence Length = 151042 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 71 gagaagatgaagaagtatg 89 ||||||||||||||||||| Sbjct: 19601 gagaagatgaagaagtatg 19583
>ref|XM_751809.1| Ustilago maydis 521 hypothetical protein (UM00755.1) partial mRNA Length = 1635 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 128 aagatgaaggggctgaagc 146 ||||||||||||||||||| Sbjct: 950 aagatgaaggggctgaagc 968
>emb|CR956396.6| Pig DNA sequence from clone CH242-205N12 on chromosome 7, complete sequence Length = 175108 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 cttgagaagatgaagaagt 86 ||||||||||||||||||| Sbjct: 121158 cttgagaagatgaagaagt 121140
>gb|AY395738.1| Nicotiana tabacum ribosomal protein L3A (RPL3A) mRNA, complete cds Length = 1416 Score = 38.2 bits (19), Expect = 7.2 Identities = 28/31 (90%) Strand = Plus / Plus Query: 119 cagatcaggaagatgaaggggctgaagcaga 149 ||||| |||||||||||||| ||||| |||| Sbjct: 552 cagataaggaagatgaagggtctgaaacaga 582
>gb|AC149268.21| Medicago truncatula clone mth2-94j16, complete sequence Length = 146810 Score = 38.2 bits (19), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 65 cagcttgagaagatgaagaagta 87 ||||||||| ||||||||||||| Sbjct: 84603 cagcttgagtagatgaagaagta 84581
>gb|AC090445.3| Canis familiaris clone RP81-55A4, complete sequence Length = 163762 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 45 gcaagaaagaaatccagat 63 ||||||||||||||||||| Sbjct: 15823 gcaagaaagaaatccagat 15841
>emb|AL441988.11| Human DNA sequence from clone RP11-348I14 on chromosome 20 Contains the 5' end of a novel gene, the C20orf80 gene for a protein similar to FSHD region gene 1 (FRG1), the MLLT10L gene for myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila) (translocated to 10)-like pseudogene, a novel gene and two CpG islands, complete sequence Length = 69918 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 44 ggcaagaaagaaatccaga 62 ||||||||||||||||||| Sbjct: 26081 ggcaagaaagaaatccaga 26099
>emb|AL355390.4| Human DNA sequence from clone RP11-512C24 on chromosome 13 Contains a 60S ribosomal protein 21 (RPL21) pseudogene and a novel gene, complete sequence Length = 158951 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 29 tatgacagtgatgctggca 47 ||||||||||||||||||| Sbjct: 50154 tatgacagtgatgctggca 50172
>emb|AL162420.13| Human DNA sequence from clone RP11-380P16 on chromosome 9 Contains the IFNA17 gene for interferon, alpha 17, a interferon, omega 1 (IFNW1) pseudogene,the IFNA14 gene for interferon, alpha 14, the IFNA5 gene for interferon, alpha 5, a novel gene (KIAA1354) (FLJ13568) and 2 interferon pseudogenes, complete sequence Length = 124491 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 agaagatgaagaagtatgc 90 ||||||||||||||||||| Sbjct: 62489 agaagatgaagaagtatgc 62471
>emb|AL022728.1|HS447D17 Human DNA sequence from clone CTA-447D17 on chromosome 1q32.2-41 Contains the 3' end of a novel gene, complete sequence Length = 26524 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 59 cagatgcagcttgagaaga 77 ||||||||||||||||||| Sbjct: 25062 cagatgcagcttgagaaga 25044
>gb|AF468550.1| Crassostrea gigas clone b059 microsatellite sequence Length = 413 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 tgagaagatgaagaagtat 88 ||||||||||||||||||| Sbjct: 206 tgagaagatgaagaagtat 224
>emb|CR937026.1|PT085P01 Pan troglodytes chromosome 11 BAC PTB-085P01, complete sequence Length = 218832 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 72 agaagatgaagaagtatgc 90 ||||||||||||||||||| Sbjct: 122343 agaagatgaagaagtatgc 122361
>emb|BX571803.23| Zebrafish DNA sequence from clone DKEY-273G3 in linkage group 9, complete sequence Length = 241708 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 34 cagtgatgctggcaagaaa 52 ||||||||||||||||||| Sbjct: 56583 cagtgatgctggcaagaaa 56601
>gb|AC011474.6| Homo sapiens chromosome 19 clone CTC-525D6, complete sequence Length = 194718 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 58 ccagatgcagcttgagaag 76 ||||||||||||||||||| Sbjct: 180510 ccagatgcagcttgagaag 180492
>gb|BC105188.1| Bos taurus similar to Methionine-R-sulfoxide reductase (Selenoprotein X 1), mRNA (cDNA clone MGC:128294 IMAGE:7986471), complete cds Length = 1314 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 109 tgcccatacccagatcagg 127 ||||||||||||||||||| Sbjct: 460 tgcccatacccagatcagg 478
>gb|AC108517.3| Homo sapiens BAC clone RP11-622J8 from 4, complete sequence Length = 128233 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 aagaaagaaatccagatgc 65 ||||||||||||||||||| Sbjct: 32088 aagaaagaaatccagatgc 32106
>gb|AC021723.11| Homo sapiens chromosome 11, clone RP11-313M3, complete sequence Length = 166447 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 38 gatgctggcaagaaagaaa 56 ||||||||||||||||||| Sbjct: 75436 gatgctggcaagaaagaaa 75454
>gb|AC095064.3| Homo sapiens BAC clone RP11-620C21 from 4, complete sequence Length = 87943 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 34 cagtgatgctggcaagaaa 52 ||||||||||||||||||| Sbjct: 4422 cagtgatgctggcaagaaa 4404
>gb|AC161372.2| Mus musculus BAC clone RP23-326G14 from chromosome 16, complete sequence Length = 208994 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 aagaaagaaatccagatgc 65 ||||||||||||||||||| Sbjct: 192791 aagaaagaaatccagatgc 192773
>dbj|AK035839.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630009H19 product:unclassifiable, full insert sequence Length = 1756 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 aagaaagaaatccagatgc 65 ||||||||||||||||||| Sbjct: 819 aagaaagaaatccagatgc 837
>gb|AC027656.4|F21F23 Sequence of BAC F21F23 from Arabidopsis thaliana chromosome 1, complete sequence Length = 79054 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 65 cagcttgagaagatgaaga 83 ||||||||||||||||||| Sbjct: 38532 cagcttgagaagatgaaga 38550
>dbj|AP003206.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1146F03 Length = 137047 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 73 gaagatgaagaagtatgct 91 ||||||||||||||||||| Sbjct: 39429 gaagatgaagaagtatgct 39411
>dbj|AP003219.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032H19 Length = 126434 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 39 atgctggcaagaaagaaat 57 ||||||||||||||||||| Sbjct: 70052 atgctggcaagaaagaaat 70034
>dbj|AB020750.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRD20 Length = 3007 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 65 cagcttgagaagatgaaga 83 ||||||||||||||||||| Sbjct: 1934 cagcttgagaagatgaaga 1916
>dbj|AB009049.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCD7 Length = 87685 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 65 cagcttgagaagatgaaga 83 ||||||||||||||||||| Sbjct: 45137 cagcttgagaagatgaaga 45155
>ref|XM_317329.2| Anopheles gambiae str. PEST ENSANGP00000006872 (ENSANGG00000005168), partial mRNA Length = 1728 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 127 gaagatgaaggggctgaag 145 ||||||||||||||||||| Sbjct: 1620 gaagatgaaggggctgaag 1638
>dbj|AK068263.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149N04, full insert sequence Length = 2005 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 71 gagaagatgaagaagtatg 89 ||||||||||||||||||| Sbjct: 618 gagaagatgaagaagtatg 636
>gb|DQ206501.1| Priapulus caudatus isolate TOA20 ribosomal protein 3 large subunit mRNA, partial cds Length = 958 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 69 ttgagaagatgaagaagta 87 ||||||||||||||||||| Sbjct: 284 ttgagaagatgaagaagta 302
>dbj|AP000744.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-691P24, complete sequence Length = 126000 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 116 acccagatcaggaagatga 134 ||||||||||||||||||| Sbjct: 7861 acccagatcaggaagatga 7879
>dbj|AP002881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0035H10 Length = 109475 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 73 gaagatgaagaagtatgct 91 ||||||||||||||||||| Sbjct: 46369 gaagatgaagaagtatgct 46351
>gb|DQ314865.1| Homo sapiens arrestin, beta 1 (ARRB1) gene, complete cds Length = 89549 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 116 acccagatcaggaagatga 134 ||||||||||||||||||| Sbjct: 36089 acccagatcaggaagatga 36071
>gb|AC123862.5| Mus musculus BAC clone RP23-356A24 from 16, complete sequence Length = 223030 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 47 aagaaagaaatccagatgc 65 ||||||||||||||||||| Sbjct: 63066 aagaaagaaatccagatgc 63048
>dbj|AP006105.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT14C19, TM0190, complete sequence Length = 125299 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 46 caagaaagaaatccagatg 64 ||||||||||||||||||| Sbjct: 122977 caagaaagaaatccagatg 122995
>dbj|AB011401.1| Suncus murinus mRNA for sucrase-isomaltase, complete cds Length = 5872 Score = 38.2 bits (19), Expect = 7.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 tggcaagaaagaaatccag 61 ||||||||||||||||||| Sbjct: 56 tggcaagaaagaaatccag 74 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,801,228 Number of Sequences: 3902068 Number of extensions: 1801228 Number of successful extensions: 135282 Number of sequences better than 10.0: 123 Number of HSP's better than 10.0 without gapping: 131 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 134594 Number of HSP's gapped (non-prelim): 673 length of query: 149 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 128 effective length of database: 17,151,101,840 effective search space: 2195341035520 effective search space used: 2195341035520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)