| Clone Name | bags19m20 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_464386.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1076 Score = 539 bits (272), Expect = e-150 Identities = 482/552 (87%) Strand = Plus / Plus Query: 44 gagcgtgccaagctcgagcaggttatcaagagactagagaaaacagcaaggtatttcaag 103 ||||| |||||| ||||||||||| |||||||||| | ||||||||| |||||||||||| Sbjct: 313 gagcgggccaagttcgagcaggttgtcaagagactggggaaaacagcgaggtatttcaag 372 Query: 104 aacttgggtaccctagggttctggtcccagttggtgtgcacgtttgtttctgctggaatt 163 || |||||||| || |||||||||||||||||||||| ||| ||||||| ||||||||| Sbjct: 373 aatttgggtactcttgggttctggtcccagttggtgtccacagttgtttccgctggaatt 432 Query: 164 ttgtcattctccacagttgttactgggaaggttacatcgccctttacattctacacaact 223 |||||||| || |||||| ||||||||||||| ||| | || ||||||||||| ||||| Sbjct: 433 ttgtcattttctacagttattactgggaaggtgacagcaccttttacattctatgcaact 492 Query: 224 gctgctggtgttgctgcagcttttatctcagtcttctggtcatttggttacatccgtctg 283 ||||||||| |||| || | |||||| ||||||||||||||||||||||||||||| || Sbjct: 493 gctgctggtattgccgcgggttttatttcagtcttctggtcatttggttacatccgcctt 552 Query: 284 tctgaaagactacggaaaacagcaagcgcacccgcaaaggctcctccacgggctgatgtg 343 ||||||||||| | ||||||||||| | ||| || |||||||||||||| |||||||| Sbjct: 553 tctgaaagacttagaaaaacagcaagtgaacctgctaaggctcctccacgtgctgatgta 612 Query: 344 attaaaagtctgaaaaatggcattgtgctcaatattcttgggatgggcgcagctgttctc 403 |||| |||||||||||||||||||||||||||||| || |||||||| || || |||||| Sbjct: 613 attagaagtctgaaaaatggcattgtgctcaatatgctcgggatgggtgctgcagttctc 672 Query: 404 ggtatgcaggcacttgttggtgctttggtagcaaaagcccttactacctctgcagtcccc 463 || ||||| ||| |||||| ||||||||||| || || ||||||||||||||||| || Sbjct: 673 ggcatgcaagcaactgttggggctttggtagcgaaggctcttactacctctgcagtacct 732 Query: 464 tattatcagacaacttccgctggtcaaagtcctgttttggctctagatgtattcctggtt 523 || ||||| |||||||| ||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 733 tactatcaagcaacttcccctggtcaaagtcctgttttggctctagatgttttcctagtt 792 Query: 524 caggcttcagcgaacaccatactgtcgcatttcctagggctggcaacttccctggagctg 583 |||||||||||||||| ||| |||||||||||||| || ||||| | ||||||||| || Sbjct: 793 caggcttcagcgaacatcatcctgtcgcatttccttggcctggcgagctccctggagttg 852 Query: 584 ctccgttccgtg 595 || || |||||| Sbjct: 853 ctgcgctccgtg 864
>dbj|AK109387.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-D08, full insert sequence Length = 1010 Score = 539 bits (272), Expect = e-150 Identities = 482/552 (87%) Strand = Plus / Plus Query: 44 gagcgtgccaagctcgagcaggttatcaagagactagagaaaacagcaaggtatttcaag 103 ||||| |||||| ||||||||||| |||||||||| | ||||||||| |||||||||||| Sbjct: 275 gagcgggccaagttcgagcaggttgtcaagagactggggaaaacagcgaggtatttcaag 334 Query: 104 aacttgggtaccctagggttctggtcccagttggtgtgcacgtttgtttctgctggaatt 163 || |||||||| || |||||||||||||||||||||| ||| ||||||| ||||||||| Sbjct: 335 aatttgggtactcttgggttctggtcccagttggtgtccacagttgtttccgctggaatt 394 Query: 164 ttgtcattctccacagttgttactgggaaggttacatcgccctttacattctacacaact 223 |||||||| || |||||| ||||||||||||| ||| | || ||||||||||| ||||| Sbjct: 395 ttgtcattttctacagttattactgggaaggtgacagcaccttttacattctatgcaact 454 Query: 224 gctgctggtgttgctgcagcttttatctcagtcttctggtcatttggttacatccgtctg 283 ||||||||| |||| || | |||||| ||||||||||||||||||||||||||||| || Sbjct: 455 gctgctggtattgccgcgggttttatttcagtcttctggtcatttggttacatccgcctt 514 Query: 284 tctgaaagactacggaaaacagcaagcgcacccgcaaaggctcctccacgggctgatgtg 343 ||||||||||| | ||||||||||| | ||| || |||||||||||||| |||||||| Sbjct: 515 tctgaaagacttagaaaaacagcaagtgaacctgctaaggctcctccacgtgctgatgta 574 Query: 344 attaaaagtctgaaaaatggcattgtgctcaatattcttgggatgggcgcagctgttctc 403 |||| |||||||||||||||||||||||||||||| || |||||||| || || |||||| Sbjct: 575 attagaagtctgaaaaatggcattgtgctcaatatgctcgggatgggtgctgcagttctc 634 Query: 404 ggtatgcaggcacttgttggtgctttggtagcaaaagcccttactacctctgcagtcccc 463 || ||||| ||| |||||| ||||||||||| || || ||||||||||||||||| || Sbjct: 635 ggcatgcaagcaactgttggggctttggtagcgaaggctcttactacctctgcagtacct 694 Query: 464 tattatcagacaacttccgctggtcaaagtcctgttttggctctagatgtattcctggtt 523 || ||||| |||||||| ||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 695 tactatcaagcaacttcccctggtcaaagtcctgttttggctctagatgttttcctagtt 754 Query: 524 caggcttcagcgaacaccatactgtcgcatttcctagggctggcaacttccctggagctg 583 |||||||||||||||| ||| |||||||||||||| || ||||| | ||||||||| || Sbjct: 755 caggcttcagcgaacatcatcctgtcgcatttccttggcctggcgagctccctggagttg 814 Query: 584 ctccgttccgtg 595 || || |||||| Sbjct: 815 ctgcgctccgtg 826
>dbj|AK069783.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030E23, full insert sequence Length = 999 Score = 539 bits (272), Expect = e-150 Identities = 482/552 (87%) Strand = Plus / Plus Query: 44 gagcgtgccaagctcgagcaggttatcaagagactagagaaaacagcaaggtatttcaag 103 ||||| |||||| ||||||||||| |||||||||| | ||||||||| |||||||||||| Sbjct: 257 gagcgggccaagttcgagcaggttgtcaagagactggggaaaacagcgaggtatttcaag 316 Query: 104 aacttgggtaccctagggttctggtcccagttggtgtgcacgtttgtttctgctggaatt 163 || |||||||| || |||||||||||||||||||||| ||| ||||||| ||||||||| Sbjct: 317 aatttgggtactcttgggttctggtcccagttggtgtccacagttgtttccgctggaatt 376 Query: 164 ttgtcattctccacagttgttactgggaaggttacatcgccctttacattctacacaact 223 |||||||| || |||||| ||||||||||||| ||| | || ||||||||||| ||||| Sbjct: 377 ttgtcattttctacagttattactgggaaggtgacagcaccttttacattctatgcaact 436 Query: 224 gctgctggtgttgctgcagcttttatctcagtcttctggtcatttggttacatccgtctg 283 ||||||||| |||| || | |||||| ||||||||||||||||||||||||||||| || Sbjct: 437 gctgctggtattgccgcgggttttatttcagtcttctggtcatttggttacatccgcctt 496 Query: 284 tctgaaagactacggaaaacagcaagcgcacccgcaaaggctcctccacgggctgatgtg 343 ||||||||||| | ||||||||||| | ||| || |||||||||||||| |||||||| Sbjct: 497 tctgaaagacttagaaaaacagcaagtgaacctgctaaggctcctccacgtgctgatgta 556 Query: 344 attaaaagtctgaaaaatggcattgtgctcaatattcttgggatgggcgcagctgttctc 403 |||| |||||||||||||||||||||||||||||| || |||||||| || || |||||| Sbjct: 557 attagaagtctgaaaaatggcattgtgctcaatatgctcgggatgggtgctgcagttctc 616 Query: 404 ggtatgcaggcacttgttggtgctttggtagcaaaagcccttactacctctgcagtcccc 463 || ||||| ||| |||||| ||||||||||| || || ||||||||||||||||| || Sbjct: 617 ggcatgcaagcaactgttggggctttggtagcgaaggctcttactacctctgcagtacct 676 Query: 464 tattatcagacaacttccgctggtcaaagtcctgttttggctctagatgtattcctggtt 523 || ||||| |||||||| ||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 677 tactatcaagcaacttcccctggtcaaagtcctgttttggctctagatgttttcctagtt 736 Query: 524 caggcttcagcgaacaccatactgtcgcatttcctagggctggcaacttccctggagctg 583 |||||||||||||||| ||| |||||||||||||| || ||||| | ||||||||| || Sbjct: 737 caggcttcagcgaacatcatcctgtcgcatttccttggcctggcgagctccctggagttg 796 Query: 584 ctccgttccgtg 595 || || |||||| Sbjct: 797 ctgcgctccgtg 808
>gb|BT017876.1| Zea mays clone EL01N0513D08.c mRNA sequence Length = 1200 Score = 507 bits (256), Expect = e-140 Identities = 474/547 (86%), Gaps = 6/547 (1%) Strand = Plus / Plus Query: 52 caagctcgagcaggttatcaagagactagagaaaacagcaaggtatttcaagaacttggg 111 |||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||| Sbjct: 317 caagctcgagcaggttatgaggagactagagaaaacagcaaggtatttcaagaatttggg 376 Query: 112 taccctagggttctggtcccagttggtgtgcacgtttgtttctgctggaattttgtcatt 171 |||||| |||||||||||||| ||||||||||| || ||||||||||||||||| |||| Sbjct: 377 taccctggggttctggtcccaattggtgtgcacaattatttctgctggaattttggcatt 436 Query: 172 ctccacagttgttactgggaaggttacatcgccctttacattctacacaactgctgctgg 231 ||| |||||||| || |||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 437 ctctacagttgtaacggggaaggtgacatcaccctttacattctatgcaactgctgctgg 496 Query: 232 tgttgctgcagcttttatctcagtcttctggtcatttggttacatccgtctgtctgaaag 291 | ||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 497 tattgctgctgcttttatttcagtcttctggtcatttggttacatccgtctctctgaaag 556 Query: 292 actacggaaaacagcaagcgcacccgcaaaggctcctccacgggctgatgtgattaaaag 351 || | |||||| | | | ||| || |||||||||||||| |||||||| |||| || Sbjct: 557 gcttagaaaaacatccaaagaacctgctaaggctcctccacgtgctgatgttgttaagag 616 Query: 352 tctgaaaaatggcattgtgctcaatattcttgggatgggcgcagctgttctcggtatgca 411 || ||||||||||| ||| | |||||||||||||||||||| ||||||||||| ||||| Sbjct: 617 ccttaaaaatggcatcgtggttaatattcttgggatgggcgctgctgttctcggcatgca 676 Query: 412 ggcacttgttggtgctttggtagcaaaagcccttactacctctgcagtcccctattatca 471 || |||||||||||||||||||||||| || || ||||||||||| ||||||||||| Sbjct: 677 agctactgttggtgctttggtagcaaaagctctcacaacctctgcagtaccctattatca 736 Query: 472 gacaacttccgctggtcaaagtcctgttttggctctagatgtattcctggttcaggcttc 531 | | ||||| ||||| ||||| |||||| ||||||| ||||| ||||||||||| Sbjct: 737 g------gctgctggccaaagccctgtcttggctttagatgttttcctagttcaggcttc 790 Query: 532 agcgaacaccatactgtcgcatttcctagggctggcaacttccctggagctgctccgttc 591 |||||||||||| |||||||||||||| ||| |||| | |||||||||||||| || || Sbjct: 791 agcgaacaccatcctgtcgcatttccttggggtggcgagctccctggagctgctgcgctc 850 Query: 592 cgtgtca 598 |||||| Sbjct: 851 ggtgtca 857
>gb|BT017168.1| Zea mays clone EL01N0368H03.c mRNA sequence Length = 1170 Score = 507 bits (256), Expect = e-140 Identities = 474/547 (86%), Gaps = 6/547 (1%) Strand = Plus / Plus Query: 52 caagctcgagcaggttatcaagagactagagaaaacagcaaggtatttcaagaacttggg 111 |||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||| Sbjct: 322 caagctcgagcaggttatgaggagactagagaaaacagcaaggtatttcaagaatttggg 381 Query: 112 taccctagggttctggtcccagttggtgtgcacgtttgtttctgctggaattttgtcatt 171 |||||| |||||||||||||| ||||||||||| || ||||||||||||||||| |||| Sbjct: 382 taccctggggttctggtcccaattggtgtgcacaattatttctgctggaattttggcatt 441 Query: 172 ctccacagttgttactgggaaggttacatcgccctttacattctacacaactgctgctgg 231 ||| |||||||| || |||||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 442 ctctacagttgtaacggggaaggtgacatcaccctttacattctatgcaactgctgctgg 501 Query: 232 tgttgctgcagcttttatctcagtcttctggtcatttggttacatccgtctgtctgaaag 291 | ||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 502 tattgctgctgcttttatttcagtcttctggtcatttggttacatccgtctctctgaaag 561 Query: 292 actacggaaaacagcaagcgcacccgcaaaggctcctccacgggctgatgtgattaaaag 351 || | |||||| | | | ||| || |||||||||||||| |||||||| |||| || Sbjct: 562 gcttagaaaaacatccaaagaacctgctaaggctcctccacgtgctgatgttgttaagag 621 Query: 352 tctgaaaaatggcattgtgctcaatattcttgggatgggcgcagctgttctcggtatgca 411 || ||||||||||| ||| | |||||||||||||||||||| ||||||||||| ||||| Sbjct: 622 ccttaaaaatggcatcgtggttaatattcttgggatgggcgctgctgttctcggcatgca 681 Query: 412 ggcacttgttggtgctttggtagcaaaagcccttactacctctgcagtcccctattatca 471 || |||||||||||||||||||||||| || || ||||||||||| ||||||||||| Sbjct: 682 agctactgttggtgctttggtagcaaaagctctcacaacctctgcagtaccctattatca 741 Query: 472 gacaacttccgctggtcaaagtcctgttttggctctagatgtattcctggttcaggcttc 531 | | ||||| ||||| ||||| |||||| ||||||| ||||| ||||||||||| Sbjct: 742 g------gctgctggccaaagccctgtcttggctttagatgttttcctagttcaggcttc 795 Query: 532 agcgaacaccatactgtcgcatttcctagggctggcaacttccctggagctgctccgttc 591 |||||||||||| |||||||||||||| ||| |||| | |||||||||||||| || || Sbjct: 796 agcgaacaccatcctgtcgcatttccttggggtggcgagctccctggagctgctgcgctc 855 Query: 592 cgtgtca 598 |||||| Sbjct: 856 ggtgtca 862
>gb|BT018285.1| Zea mays clone EL01T0205B03.c mRNA sequence Length = 1237 Score = 488 bits (246), Expect = e-134 Identities = 462/534 (86%) Strand = Plus / Plus Query: 52 caagctcgagcaggttatcaagagactagagaaaacagcaaggtatttcaagaacttggg 111 |||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||| Sbjct: 271 caagctcgagcaggttatgaggagactagagaaaacagcaaggtatttcaagaatttggg 330 Query: 112 taccctagggttctggtcccagttggtgtgcacgtttgtttctgctggaattttgtcatt 171 |||||| |||||||||||||||||||||||||| |||| ||||||||||||||| |||| Sbjct: 331 taccctggggttctggtcccagttggtgtgcacaattgtctctgctggaattttggcatt 390 Query: 172 ctccacagttgttactgggaaggttacatcgccctttacattctacacaactgctgctgg 231 ||| |||||||| || |||||||| ||| | |||||||||||||| | ||||||||||| Sbjct: 391 ctctacagttgtaacggggaaggtgacagcaccctttacattctatgcgactgctgctgg 450 Query: 232 tgttgctgcagcttttatctcagtcttctggtcatttggttacatccgtctgtctgaaag 291 | ||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 451 tattgctgctgcttttatctcatccttctggtcatttggttacatccgtctctctgaaag 510 Query: 292 actacggaaaacagcaagcgcacccgcaaaggctcctccacgggctgatgtgattaaaag 351 || | | |||| ||| | ||| || |||||||||||||| || ||||| |||| || Sbjct: 511 gcttagaagaacatcaaaggaacctgctaaggctcctccacgcgccgatgttgttaatag 570 Query: 352 tctgaaaaatggcattgtgctcaatattcttgggatgggcgcagctgttctcggtatgca 411 |||||||||||||||||||| |||||||| ||||||||||| |||||||| || ||||| Sbjct: 571 cctgaaaaatggcattgtgctgaatattctcgggatgggcgccgctgttctgggcatgca 630 Query: 412 ggcacttgttggtgctttggtagcaaaagcccttactacctctgcagtcccctattatca 471 || ||||||||||||||||||||||| || || ||||||||||| ||||||||||| Sbjct: 631 agccaccgttggtgctttggtagcaaaagctctcacaacctctgcagttccctattatca 690 Query: 472 gacaacttccgctggtcaaagtcctgttttggctctagatgtattcctggttcaggcttc 531 | | || | | || ||||| ||||| ||||| ||||||| ||||| ||||||||||| Sbjct: 691 ggctgctgctccaggccaaagccctgtgttggccttagatgttttcctagttcaggcttc 750 Query: 532 agcgaacaccatactgtcgcatttcctagggctggcaacttccctggagctgct 585 |||||||||||| |||||||||||||| |||||||| | |||||||||||||| Sbjct: 751 agcgaacaccatcctgtcgcatttcctcgggctggcgagctccctggagctgct 804
>gb|AY104426.1| Zea mays PCO147781 mRNA sequence Length = 716 Score = 278 bits (140), Expect = 2e-71 Identities = 307/363 (84%), Gaps = 6/363 (1%) Strand = Plus / Plus Query: 236 gctgcagcttttatctcagtcttctggtcatttggttacatccgtctgtctgaaagacta 295 ||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| || Sbjct: 2 gctgctgcttttatttcagtcttctggtcatttggttacatccgtctctctgaaaggctt 61 Query: 296 cggaaaacagcaagcgcacccgcaaaggctcctccacgggctgatgtgattaaaagtctg 355 | |||||| | | | ||| || |||||||||||||| |||||||| |||| || || Sbjct: 62 agaaaaacatccaaagaacctgctaaggctcctccacgtgctgatgttgttaagagcctt 121 Query: 356 aaaaatggcattgtgctcaatattcttgggatgggcgcagctgttctcggtatgcaggca 415 ||||||||||| ||| | |||||||||||||||||||| ||||||||||| ||||| || Sbjct: 122 aaaaatggcatcgtggttaatattcttgggatgggcgctgctgttctcggcatgcaagct 181 Query: 416 cttgttggtgctttggtagcaaaagcccttactacctctgcagtcccctattatcagaca 475 |||||||||||||||||||||||| || || ||||||||||| |||||||||||| Sbjct: 182 actgttggtgctttggtagcaaaagctctcacaacctctgcagtaccctattatcag--- 238 Query: 476 acttccgctggtcaaagtcctgttttggctctagatgtattcctggttcaggcttcagcg 535 | ||||| ||||| ||||| |||||| ||||||| ||||| ||||||||||||||| Sbjct: 239 ---gctgctggccaaagccctgtcttggctttagatgttttcctagttcaggcttcagcg 295 Query: 536 aacaccatactgtcgcatttcctagggctggcaacttccctggagctgctccgttccgtg 595 |||||||| |||||||||||||| ||| |||| | |||||||||||||| || || ||| Sbjct: 296 aacaccatcctgtcgcatttccttggggtggcgagctccctggagctgctgcgctcggtg 355 Query: 596 tca 598 ||| Sbjct: 356 tca 358
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 256 bits (129), Expect = 8e-65 Identities = 219/249 (87%) Strand = Plus / Plus Query: 61 gcaggttatcaagagactagagaaaacagcaaggtatttcaagaacttgggtaccctagg 120 ||||||| |||||||||| | ||||||||| |||||||||||||| |||||||| || || Sbjct: 4860900 gcaggttgtcaagagactggggaaaacagcgaggtatttcaagaatttgggtactcttgg 4860959 Query: 121 gttctggtcccagttggtgtgcacgtttgtttctgctggaattttgtcattctccacagt 180 |||||||||||||||||||| ||| ||||||| ||||||||||||||||| || ||||| Sbjct: 4860960 gttctggtcccagttggtgtccacagttgtttccgctggaattttgtcattttctacagt 4861019 Query: 181 tgttactgggaaggttacatcgccctttacattctacacaactgctgctggtgttgctgc 240 | ||||||||||||| ||| | || ||||||||||| |||||||||||||| |||| || Sbjct: 4861020 tattactgggaaggtgacagcaccttttacattctatgcaactgctgctggtattgccgc 4861079 Query: 241 agcttttatctcagtcttctggtcatttggttacatccgtctgtctgaaagactacggaa 300 | |||||| ||||||||||||||||||||||||||||| || ||||||||||| | || Sbjct: 4861080 gggttttatttcagtcttctggtcatttggttacatccgcctttctgaaagacttagaaa 4861139 Query: 301 aacagcaag 309 ||||||||| Sbjct: 4861140 aacagcaag 4861148 Score = 220 bits (111), Expect = 4e-54 Identities = 183/207 (88%) Strand = Plus / Plus Query: 321 aggctcctccacgggctgatgtgattaaaagtctgaaaaatggcattgtgctcaatattc 380 ||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||| | Sbjct: 4861392 aggctcctccacgtgctgatgtaattagaagtctgaaaaatggcattgtgctcaatatgc 4861451 Query: 381 ttgggatgggcgcagctgttctcggtatgcaggcacttgttggtgctttggtagcaaaag 440 | |||||||| || || |||||||| ||||| ||| |||||| ||||||||||| || | Sbjct: 4861452 tcgggatgggtgctgcagttctcggcatgcaagcaactgttggggctttggtagcgaagg 4861511 Query: 441 cccttactacctctgcagtcccctattatcagacaacttccgctggtcaaagtcctgttt 500 | ||||||||||||||||| || || ||||| |||||||| |||||||||||||||||| Sbjct: 4861512 ctcttactacctctgcagtaccttactatcaagcaacttcccctggtcaaagtcctgttt 4861571 Query: 501 tggctctagatgtattcctggttcagg 527 ||||||||||||| ||||| ||||||| Sbjct: 4861572 tggctctagatgttttcctagttcagg 4861598 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 524 caggcttcagcgaacaccatactgtcgcatttcctagggctggcaacttccctggagctg 583 |||||||||||||||| ||| |||||||||||||| || ||||| | ||||||||| || Sbjct: 4862500 caggcttcagcgaacatcatcctgtcgcatttccttggcctggcgagctccctggagttg 4862559 Query: 584 ctccgttccgtg 595 || || |||||| Sbjct: 4862560 ctgcgctccgtg 4862571
>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1073_F05 Length = 124252 Score = 256 bits (129), Expect = 8e-65 Identities = 219/249 (87%) Strand = Plus / Plus Query: 61 gcaggttatcaagagactagagaaaacagcaaggtatttcaagaacttgggtaccctagg 120 ||||||| |||||||||| | ||||||||| |||||||||||||| |||||||| || || Sbjct: 103059 gcaggttgtcaagagactggggaaaacagcgaggtatttcaagaatttgggtactcttgg 103118 Query: 121 gttctggtcccagttggtgtgcacgtttgtttctgctggaattttgtcattctccacagt 180 |||||||||||||||||||| ||| ||||||| ||||||||||||||||| || ||||| Sbjct: 103119 gttctggtcccagttggtgtccacagttgtttccgctggaattttgtcattttctacagt 103178 Query: 181 tgttactgggaaggttacatcgccctttacattctacacaactgctgctggtgttgctgc 240 | ||||||||||||| ||| | || ||||||||||| |||||||||||||| |||| || Sbjct: 103179 tattactgggaaggtgacagcaccttttacattctatgcaactgctgctggtattgccgc 103238 Query: 241 agcttttatctcagtcttctggtcatttggttacatccgtctgtctgaaagactacggaa 300 | |||||| ||||||||||||||||||||||||||||| || ||||||||||| | || Sbjct: 103239 gggttttatttcagtcttctggtcatttggttacatccgcctttctgaaagacttagaaa 103298 Query: 301 aacagcaag 309 ||||||||| Sbjct: 103299 aacagcaag 103307 Score = 220 bits (111), Expect = 4e-54 Identities = 183/207 (88%) Strand = Plus / Plus Query: 321 aggctcctccacgggctgatgtgattaaaagtctgaaaaatggcattgtgctcaatattc 380 ||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||| | Sbjct: 103551 aggctcctccacgtgctgatgtaattagaagtctgaaaaatggcattgtgctcaatatgc 103610 Query: 381 ttgggatgggcgcagctgttctcggtatgcaggcacttgttggtgctttggtagcaaaag 440 | |||||||| || || |||||||| ||||| ||| |||||| ||||||||||| || | Sbjct: 103611 tcgggatgggtgctgcagttctcggcatgcaagcaactgttggggctttggtagcgaagg 103670 Query: 441 cccttactacctctgcagtcccctattatcagacaacttccgctggtcaaagtcctgttt 500 | ||||||||||||||||| || || ||||| |||||||| |||||||||||||||||| Sbjct: 103671 ctcttactacctctgcagtaccttactatcaagcaacttcccctggtcaaagtcctgttt 103730 Query: 501 tggctctagatgtattcctggttcagg 527 ||||||||||||| ||||| ||||||| Sbjct: 103731 tggctctagatgttttcctagttcagg 103757 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 524 caggcttcagcgaacaccatactgtcgcatttcctagggctggcaacttccctggagctg 583 |||||||||||||||| ||| |||||||||||||| || ||||| | ||||||||| || Sbjct: 104659 caggcttcagcgaacatcatcctgtcgcatttccttggcctggcgagctccctggagttg 104718 Query: 584 ctccgttccgtg 595 || || |||||| Sbjct: 104719 ctgcgctccgtg 104730
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_F01 Length = 113755 Score = 256 bits (129), Expect = 8e-65 Identities = 219/249 (87%) Strand = Plus / Plus Query: 61 gcaggttatcaagagactagagaaaacagcaaggtatttcaagaacttgggtaccctagg 120 ||||||| |||||||||| | ||||||||| |||||||||||||| |||||||| || || Sbjct: 5639 gcaggttgtcaagagactggggaaaacagcgaggtatttcaagaatttgggtactcttgg 5698 Query: 121 gttctggtcccagttggtgtgcacgtttgtttctgctggaattttgtcattctccacagt 180 |||||||||||||||||||| ||| ||||||| ||||||||||||||||| || ||||| Sbjct: 5699 gttctggtcccagttggtgtccacagttgtttccgctggaattttgtcattttctacagt 5758 Query: 181 tgttactgggaaggttacatcgccctttacattctacacaactgctgctggtgttgctgc 240 | ||||||||||||| ||| | || ||||||||||| |||||||||||||| |||| || Sbjct: 5759 tattactgggaaggtgacagcaccttttacattctatgcaactgctgctggtattgccgc 5818 Query: 241 agcttttatctcagtcttctggtcatttggttacatccgtctgtctgaaagactacggaa 300 | |||||| ||||||||||||||||||||||||||||| || ||||||||||| | || Sbjct: 5819 gggttttatttcagtcttctggtcatttggttacatccgcctttctgaaagacttagaaa 5878 Query: 301 aacagcaag 309 ||||||||| Sbjct: 5879 aacagcaag 5887 Score = 220 bits (111), Expect = 4e-54 Identities = 183/207 (88%) Strand = Plus / Plus Query: 321 aggctcctccacgggctgatgtgattaaaagtctgaaaaatggcattgtgctcaatattc 380 ||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||| | Sbjct: 6131 aggctcctccacgtgctgatgtaattagaagtctgaaaaatggcattgtgctcaatatgc 6190 Query: 381 ttgggatgggcgcagctgttctcggtatgcaggcacttgttggtgctttggtagcaaaag 440 | |||||||| || || |||||||| ||||| ||| |||||| ||||||||||| || | Sbjct: 6191 tcgggatgggtgctgcagttctcggcatgcaagcaactgttggggctttggtagcgaagg 6250 Query: 441 cccttactacctctgcagtcccctattatcagacaacttccgctggtcaaagtcctgttt 500 | ||||||||||||||||| || || ||||| |||||||| |||||||||||||||||| Sbjct: 6251 ctcttactacctctgcagtaccttactatcaagcaacttcccctggtcaaagtcctgttt 6310 Query: 501 tggctctagatgtattcctggttcagg 527 ||||||||||||| ||||| ||||||| Sbjct: 6311 tggctctagatgttttcctagttcagg 6337 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 524 caggcttcagcgaacaccatactgtcgcatttcctagggctggcaacttccctggagctg 583 |||||||||||||||| ||| |||||||||||||| || ||||| | ||||||||| || Sbjct: 7239 caggcttcagcgaacatcatcctgtcgcatttccttggcctggcgagctccctggagttg 7298 Query: 584 ctccgttccgtg 595 || || |||||| Sbjct: 7299 ctgcgctccgtg 7310
>dbj|AK073270.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027A18, full insert sequence Length = 1207 Score = 192 bits (97), Expect = 1e-45 Identities = 397/497 (79%) Strand = Plus / Plus Query: 44 gagcgtgccaagctcgagcaggttatcaagagactagagaaaacagcaaggtatttcaag 103 ||||| |||| ||||| ||||||| |||||| ||||| ||||||||| |||||||||| Sbjct: 306 gagcgcgccatgctcgcccaggttagcaagaggctagaaaaaacagcacagtatttcaag 365 Query: 104 aacttgggtaccctagggttctggtcccagttggtgtgcacgtttgtttctgctggaatt 163 | ||||| ||||| || |||||||| ||||| |||||||| ||| || || |||||| Sbjct: 366 actttgggcaccctgggattctggtctcagttagtgtgcacaactgtctcagcaggaatt 425 Query: 164 ttgtcattctccacagttgttactgggaaggttacatcgccctttacattctacacaact 223 ||||||||||| |||| | ||| ||||| | ||||| ||||||||||||| ||||| Sbjct: 426 ttgtcattctcggcagtcgctacagggaatgcaacatctccctttacattctttgcaact 485 Query: 224 gctgctggtgttgctgcagcttttatctcagtcttctggtcatttggttacatccgtctg 283 | |||| ||| ||| || ||||| |||||||| ||| | |||||||| |||||||| Sbjct: 486 tcaattggtattgttgcggcatttatttcagtcttttgggcttttggttatatccgtctt 545 Query: 284 tctgaaagactacggaaaacagcaagcgcacccgcaaaggctcctccacgggctgatgtg 343 || |||| || || |||||||| | ||| ||||||||||||||||| || |||||| Sbjct: 546 tcacaaaggcttaagagaacagcaaacaaacctgcaaaggctcctccacgtgccgatgtg 605 Query: 344 attaaaagtctgaaaaatggcattgtgctcaatattcttgggatgggcgcagctgttctc 403 | |||| ||| |||||||| |||||||||||| ||||||| ||||| || || |||| Sbjct: 606 gtaaaaaatctcaaaaatggtattgtgctcaatgttcttggaatgggtgctgcaattctt 665 Query: 404 ggtatgcaggcacttgttggtgctttggtagcaaaagcccttactacctctgcagtcccc 463 |||||||||||| ||| || || ||||||||||||||||| ||||| |||||||| || Sbjct: 666 ggtatgcaggcaactgtaggggcattggtagcaaaagccctcactacatctgcagtgccg 725 Query: 464 tattatcagacaacttccgctggtcaaagtcctgttttggctctagatgtattcctggtt 523 || || ||| || || |||| || || |||||| | || ||||||| ||||| ||| Sbjct: 726 tactaccagggaatatctcctggccagagccctgttctatctttagatgttttccttgtt 785 Query: 524 caggcttcagcgaacac 540 ||||||||||| ||||| Sbjct: 786 caggcttcagccaacac 802
>dbj|AK063888.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-G03, full insert sequence Length = 728 Score = 127 bits (64), Expect = 5e-26 Identities = 238/296 (80%) Strand = Plus / Plus Query: 245 tttatctcagtcttctggtcatttggttacatccgtctgtctgaaagactacggaaaaca 304 ||||| |||||||| ||| | |||||||| |||||||| || |||| || || |||| Sbjct: 26 tttatttcagtcttttgggcttttggttatatccgtctttcacaaaggcttaagagaaca 85 Query: 305 gcaagcgcacccgcaaaggctcctccacgggctgatgtgattaaaagtctgaaaaatggc 364 |||| | ||| ||||||||||||||||| || |||||| | |||| ||| |||||||| Sbjct: 86 gcaaacaaacctgcaaaggctcctccacgtgccgatgtggtaaaaaatctcaaaaatggt 145 Query: 365 attgtgctcaatattcttgggatgggcgcagctgttctcggtatgcaggcacttgttggt 424 |||||||||||| ||||||| ||||| || || |||| |||||||||||| ||| || Sbjct: 146 attgtgctcaatgttcttggaatgggtgctgcaattcttggtatgcaggcaactgtaggg 205 Query: 425 gctttggtagcaaaagcccttactacctctgcagtcccctattatcagacaacttccgct 484 || ||||||||||||||||| ||||| |||||||| || || || ||| || || || Sbjct: 206 gcattggtagcaaaagccctcactacatctgcagtgccgtactaccagggaatatctcct 265 Query: 485 ggtcaaagtcctgttttggctctagatgtattcctggttcaggcttcagcgaacac 540 || || || |||||| | || ||||||| ||||| |||||||||||||| ||||| Sbjct: 266 ggccagagccctgttctatctttagatgttttccttgttcaggcttcagccaacac 321
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 109 bits (55), Expect = 1e-20 Identities = 118/139 (84%) Strand = Plus / Minus Query: 321 aggctcctccacgggctgatgtgattaaaagtctgaaaaatggcattgtgctcaatattc 380 ||||||||||||| || |||||| | |||| ||| |||||||| |||||||||||| ||| Sbjct: 25545144 aggctcctccacgtgccgatgtggtaaaaaatctcaaaaatggtattgtgctcaatgttc 25545085 Query: 381 ttgggatgggcgcagctgttctcggtatgcaggcacttgttggtgctttggtagcaaaag 440 |||| ||||| || || |||| |||||||||||| ||| || || ||||||||||||| Sbjct: 25545084 ttggaatgggtgctgcaattcttggtatgcaggcaactgtaggggcattggtagcaaaag 25545025 Query: 441 cccttactacctctgcagt 459 |||| ||||| |||||||| Sbjct: 25545024 ccctcactacatctgcagt 25545006 Score = 99.6 bits (50), Expect = 1e-17 Identities = 179/222 (80%) Strand = Plus / Minus Query: 61 gcaggttatcaagagactagagaaaacagcaaggtatttcaagaacttgggtaccctagg 120 |||||||| |||||| ||||| ||||||||| ||||||||||| ||||| ||||| || Sbjct: 25545755 gcaggttagcaagaggctagaaaaaacagcacagtatttcaagactttgggcaccctggg 25545696 Query: 121 gttctggtcccagttggtgtgcacgtttgtttctgctggaattttgtcattctccacagt 180 |||||||| ||||| |||||||| ||| || || ||||||||||||||||| |||| Sbjct: 25545695 attctggtctcagttagtgtgcacaactgtctcagcaggaattttgtcattctcggcagt 25545636 Query: 181 tgttactgggaaggttacatcgccctttacattctacacaactgctgctggtgttgctgc 240 | ||| ||||| | ||||| ||||||||||||| ||||| | |||| ||| ||| Sbjct: 25545635 cgctacagggaatgcaacatctccctttacattctttgcaacttcaattggtattgttgc 25545576 Query: 241 agcttttatctcagtcttctggtcatttggttacatccgtct 282 || ||||| |||||||| ||| | |||||||| |||||||| Sbjct: 25545575 ggcatttatttcagtcttttgggcttttggttatatccgtct 25545534 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 tctgctggaattttgtcatt 171 |||||||||||||||||||| Sbjct: 4377582 tctgctggaattttgtcatt 4377601
>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0523F01 Length = 146419 Score = 109 bits (55), Expect = 1e-20 Identities = 118/139 (84%) Strand = Plus / Minus Query: 321 aggctcctccacgggctgatgtgattaaaagtctgaaaaatggcattgtgctcaatattc 380 ||||||||||||| || |||||| | |||| ||| |||||||| |||||||||||| ||| Sbjct: 63461 aggctcctccacgtgccgatgtggtaaaaaatctcaaaaatggtattgtgctcaatgttc 63402 Query: 381 ttgggatgggcgcagctgttctcggtatgcaggcacttgttggtgctttggtagcaaaag 440 |||| ||||| || || |||| |||||||||||| ||| || || ||||||||||||| Sbjct: 63401 ttggaatgggtgctgcaattcttggtatgcaggcaactgtaggggcattggtagcaaaag 63342 Query: 441 cccttactacctctgcagt 459 |||| ||||| |||||||| Sbjct: 63341 ccctcactacatctgcagt 63323 Score = 99.6 bits (50), Expect = 1e-17 Identities = 179/222 (80%) Strand = Plus / Minus Query: 61 gcaggttatcaagagactagagaaaacagcaaggtatttcaagaacttgggtaccctagg 120 |||||||| |||||| ||||| ||||||||| ||||||||||| ||||| ||||| || Sbjct: 64072 gcaggttagcaagaggctagaaaaaacagcacagtatttcaagactttgggcaccctggg 64013 Query: 121 gttctggtcccagttggtgtgcacgtttgtttctgctggaattttgtcattctccacagt 180 |||||||| ||||| |||||||| ||| || || ||||||||||||||||| |||| Sbjct: 64012 attctggtctcagttagtgtgcacaactgtctcagcaggaattttgtcattctcggcagt 63953 Query: 181 tgttactgggaaggttacatcgccctttacattctacacaactgctgctggtgttgctgc 240 | ||| ||||| | ||||| ||||||||||||| ||||| | |||| ||| ||| Sbjct: 63952 cgctacagggaatgcaacatctccctttacattctttgcaacttcaattggtattgttgc 63893 Query: 241 agcttttatctcagtcttctggtcatttggttacatccgtct 282 || ||||| |||||||| ||| | |||||||| |||||||| Sbjct: 63892 ggcatttatttcagtcttttgggcttttggttatatccgtct 63851
>ref|XM_318376.2| Anopheles gambiae str. PEST ENSANGP00000002726 (ENSANGG00000002259), partial mRNA Length = 3549 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 222 ctgctgctggtgttgctgcagct 244 ||||||||||||||||||||||| Sbjct: 3363 ctgctgctggtgttgctgcagct 3341
>ref|XM_637869.1| Dictyostelium discoideum hypothetical protein (DDB0169026), partial mRNA Length = 2448 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 222 ctgctgctggtgttgctgcagctttt 247 ||||||||||| |||||||||||||| Sbjct: 788 ctgctgctggtattgctgcagctttt 813
>gb|AC117075.2| Dictyostelium discoideum chromosome 2 map 5201047-5455781 strain AX4, complete sequence Length = 254733 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 222 ctgctgctggtgttgctgcagctttt 247 ||||||||||| |||||||||||||| Sbjct: 227737 ctgctgctggtattgctgcagctttt 227712
>ref|XM_817746.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.70.0940) partial mRNA Length = 1380 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 219 caactgctgctggtgttgctg 239 ||||||||||||||||||||| Sbjct: 123 caactgctgctggtgttgctg 103
>gb|AC023691.3| Drosophila melanogaster X BAC RP98-12H1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179892 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 220 aactgctgctggtgttgctgcagct 244 |||||||||||||| |||||||||| Sbjct: 63003 aactgctgctggtgctgctgcagct 62979
>ref|NM_132538.1| Drosophila melanogaster CG15737-RA (CG15737), mRNA Length = 5119 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 220 aactgctgctggtgttgctgcagct 244 |||||||||||||| |||||||||| Sbjct: 4538 aactgctgctggtgctgctgcagct 4514
>gb|AC073283.8| Homo sapiens BAC clone RP11-761B3 from 2, complete sequence Length = 181720 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 222 ctgctgctggtgttgctgcagcttt 246 ||||||||||||||||||| ||||| Sbjct: 130338 ctgctgctggtgttgctgctgcttt 130362
>gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 of 74 of the complete sequence Length = 308317 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 220 aactgctgctggtgttgctgcagct 244 |||||||||||||| |||||||||| Sbjct: 190444 aactgctgctggtgctgctgcagct 190420
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 actgctgctggtgttgctgc 240 |||||||||||||||||||| Sbjct: 1058069 actgctgctggtgttgctgc 1058088
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome Length = 3397754 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 67 tatcaagagactagagaaaacagcaagg 94 |||||||| |||||||||||||||||| Sbjct: 1912629 tatcaagaagctagagaaaacagcaagg 1912602
>gb|AC139335.3| Mus musculus BAC clone RP23-376N11 from chromosome 10, complete sequence Length = 195132 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gtttgtttctgctggaattt 164 |||||||||||||||||||| Sbjct: 192123 gtttgtttctgctggaattt 192142
>gb|AC124814.10| Mus musculus chromosome 1, clone RP24-119P5, complete sequence Length = 162020 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 acttgggtaccctagggttctggt 128 |||||||||||| ||||||||||| Sbjct: 66879 acttgggtaccccagggttctggt 66902
>gb|AC092031.4| Homo sapiens BAC clone RP11-660M7 from 7, complete sequence Length = 99374 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 158 ggaattttgtcattctccacagtt 181 |||||||||||||||| ||||||| Sbjct: 40007 ggaattttgtcattctacacagtt 39984
>gb|AC183690.3| Cavia porcellus clone CH234-212D11, complete sequence Length = 108490 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 tctgctggaattttgtcatt 171 |||||||||||||||||||| Sbjct: 57177 tctgctggaattttgtcatt 57196
>gb|AC175208.3| Cavia porcellus clone CH234-14J14, complete sequence Length = 140345 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 tctgctggaattttgtcatt 171 |||||||||||||||||||| Sbjct: 9084 tctgctggaattttgtcatt 9103
>emb|AL162582.30| Human DNA sequence from clone RP1-276N6 on chromosome 6 Contains the 5' end of the SLC22A2 gene for solute carrier family 22 (organic cation transporter), member 2 (OCT2) and a novel gene, complete sequence Length = 85786 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 actgctgctggtgttgctgc 240 |||||||||||||||||||| Sbjct: 24513 actgctgctggtgttgctgc 24494
>emb|AL162407.14| Human DNA sequence from clone RP11-393E20 on chromosome 10 Contains the 3' end of the gene for a novel NHL repeat domain containing protein (FLJ33312 FLJ25621 DKFZp313F0131 FLJ30653 FLJ36994 FLJ20147), complete sequence Length = 114145 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 ttctgctggaattttgtcat 170 |||||||||||||||||||| Sbjct: 47360 ttctgctggaattttgtcat 47341
>emb|AL035702.7|HS593C16 Human DNA sequence from clone RP4-593C16 on chromosome 1q24.1-25.2 Contains the 3' end of the RASAL2 gene for RAS protein activator like 2, the 3' end of a novel gene and a CpG island, complete sequence Length = 81971 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 505 tctagatgtattcctggttc 524 |||||||||||||||||||| Sbjct: 41354 tctagatgtattcctggttc 41373
>gb|AC129227.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0099J16, complete sequence Length = 133198 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 aagactacggaaaacagcaa 308 |||||||||||||||||||| Sbjct: 66040 aagactacggaaaacagcaa 66021
>gb|AY129337.1| Mycobacteriophage Bxz1, complete genome Length = 156102 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gcaagcgcacccgcaaaggc 324 |||||||||||||||||||| Sbjct: 39826 gcaagcgcacccgcaaaggc 39845
>emb|CR858242.1| Pongo pygmaeus mRNA; cDNA DKFZp469B244 (from clone DKFZp469B244) Length = 5660 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gctgctggtgttgctgcagctttt 247 |||||||| ||||||||||||||| Sbjct: 812 gctgctggagttgctgcagctttt 835
>emb|CR857095.1| Pongo pygmaeus mRNA; cDNA DKFZp469L0417 (from clone DKFZp469L0417) Length = 5485 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gctgctggtgttgctgcagctttt 247 |||||||| ||||||||||||||| Sbjct: 838 gctgctggagttgctgcagctttt 861
>gb|AC023503.23| Homo sapiens 3 BAC RP11-217I10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160370 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 tttgtttctgctggaatttt 165 |||||||||||||||||||| Sbjct: 50632 tttgtttctgctggaatttt 50651
>dbj|AK220319.1| Mus musculus premature mRNA for mKIAA0046 protein Length = 3289 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gctgctggtgttgctgcagctttt 247 |||||||| ||||||||||||||| Sbjct: 396 gctgctggcgttgctgcagctttt 419
>gb|AC104606.6| Drosophila melanogaster X BAC RP98-26L11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 183105 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 222 ctgctgctggtgttgctgcagctt 245 ||||||||||||||||||| |||| Sbjct: 91486 ctgctgctggtgttgctgctgctt 91463
>gb|AC105749.2| Homo sapiens chromosome 3 clone RP11-640L9, complete sequence Length = 200450 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 caagagactagagaaaacag 89 |||||||||||||||||||| Sbjct: 169441 caagagactagagaaaacag 169460
>gb|AC105314.5| Homo sapiens BAC clone RP11-312H15 from 4, complete sequence Length = 193665 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 cacagttgttactgggaagg 194 |||||||||||||||||||| Sbjct: 136371 cacagttgttactgggaagg 136390
>gb|AY095064.1| Drosophila melanogaster RE06823 full insert cDNA Length = 1862 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 222 ctgctgctggtgttgctgcagctt 245 ||||||||||||||||||| |||| Sbjct: 708 ctgctgctggtgttgctgctgctt 685
>ref|NM_132172.2| Drosophila melanogaster CG15478-RA (CG15478), mRNA Length = 1845 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 222 ctgctgctggtgttgctgcagctt 245 ||||||||||||||||||| |||| Sbjct: 707 ctgctgctggtgttgctgctgctt 684
>gb|AC097360.2| Homo sapiens chromosome 3 clone RP11-344C13, complete sequence Length = 166349 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 caagagactagagaaaacag 89 |||||||||||||||||||| Sbjct: 111900 caagagactagagaaaacag 111919
>dbj|AK145053.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length enriched library, clone:G830032D15 product:chloride channel 6, full insert sequence Length = 3123 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gctgctggtgttgctgcagctttt 247 |||||||| ||||||||||||||| Sbjct: 784 gctgctggcgttgctgcagctttt 807
>dbj|AK165362.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430113C14 product:chloride channel 6, full insert sequence Length = 3311 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gctgctggtgttgctgcagctttt 247 |||||||| ||||||||||||||| Sbjct: 787 gctgctggcgttgctgcagctttt 810
>gb|AY052081.1| Drosophila melanogaster SD03340 full length cDNA Length = 1933 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 222 ctgctgctggtgttgctgcagctt 245 ||||||||||||||||||| |||| Sbjct: 773 ctgctgctggtgttgctgctgctt 750
>gb|U90878.1|HSU90878 Homo sapiens carboxyl terminal LIM domain protein (CLIM1) mRNA, complete cds Length = 1496 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 235 tgctgcagcttttatctcagtcttctgg 262 ||||||||||||| ||||||| |||||| Sbjct: 1169 tgctgcagcttttctctcagtgttctgg 1196
>dbj|AK045787.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230311B16 product:chloride channel 6, full insert sequence Length = 2335 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gctgctggtgttgctgcagctttt 247 |||||||| ||||||||||||||| Sbjct: 326 gctgctggcgttgctgcagctttt 349
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 aagactacggaaaacagcaa 308 |||||||||||||||||||| Sbjct: 25938926 aagactacggaaaacagcaa 25938945
>ref|XM_227870.3| PREDICTED: Rattus norvegicus chloride channel 6 (predicted) (Clcn6_predicted), mRNA Length = 2908 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gctgctggtgttgctgcagctttt 247 |||||||| ||||||||||||||| Sbjct: 739 gctgctggagttgctgcagctttt 762
>gb|AC146065.4| Pan troglodytes BAC clone clone RP43-60D22 from 7, complete sequence Length = 172757 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 ggaattttgtcattctccacagtt 181 |||||||||||||||| ||||||| Sbjct: 67862 ggaattttgtcattctacacagtt 67885
>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0470C02 Length = 158849 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 tctgctggaattttgtcatt 171 |||||||||||||||||||| Sbjct: 25263 tctgctggaattttgtcatt 25282
>gb|AC005870.2|AC005870 b89h3, complete sequence Length = 78816 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 ttctgctggaattttgtcat 170 |||||||||||||||||||| Sbjct: 36310 ttctgctggaattttgtcat 36291
>gb|AC005886.2|AC005886 b240g16, complete sequence Length = 134011 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 ttctgctggaattttgtcat 170 |||||||||||||||||||| Sbjct: 128658 ttctgctggaattttgtcat 128677
>gb|AC153620.4| Mus musculus 6 BAC RP23-326P16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 194383 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 agtcttctggtcatttggtt 272 |||||||||||||||||||| Sbjct: 124798 agtcttctggtcatttggtt 124817
>gb|AF030104.1|MMCLCNVI4 Mus musculus putative chloride channel protein CLC6 (Clc6), exons 5-18 Length = 14925 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gctgctggtgttgctgcagctttt 247 |||||||| ||||||||||||||| Sbjct: 8359 gctgctggcgttgctgcagctttt 8382
>gb|AE003441.3| Drosophila melanogaster chromosome X, section 25 of 74 of the complete sequence Length = 285949 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 222 ctgctgctggtgttgctgcagctt 245 ||||||||||||||||||| |||| Sbjct: 200362 ctgctgctggtgttgctgctgctt 200385
>gb|AC004067.1|AC004067 Homo sapiens chromosome 4 clone B366O24 map 4q25, complete sequence Length = 161326 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 cacagttgttactgggaagg 194 |||||||||||||||||||| Sbjct: 36640 cacagttgttactgggaagg 36659
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 aagactacggaaaacagcaa 308 |||||||||||||||||||| Sbjct: 26257624 aagactacggaaaacagcaa 26257643
>ref|NM_011929.1| Mus musculus chloride channel 6 (Clcn6), mRNA Length = 2910 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gctgctggtgttgctgcagctttt 247 |||||||| ||||||||||||||| Sbjct: 739 gctgctggcgttgctgcagctttt 762
>gb|AC147634.3| Mus musculus BAC clone RP23-305G22 from 10, complete sequence Length = 207157 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 gtttgtttctgctggaattt 164 |||||||||||||||||||| Sbjct: 116318 gtttgtttctgctggaattt 116299
>emb|AL606929.13| Mouse DNA sequence from clone RP23-139J21 on chromosome 4, complete sequence Length = 198728 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gctgctggtgttgctgcagctttt 247 |||||||| ||||||||||||||| Sbjct: 18863 gctgctggcgttgctgcagctttt 18840
>emb|AL807765.6| Mouse DNA sequence from clone RP23-478J19 on chromosome X, complete sequence Length = 48105 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 gctggtgttgctgcagcttt 246 |||||||||||||||||||| Sbjct: 33910 gctggtgttgctgcagcttt 33891 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,895,461 Number of Sequences: 3902068 Number of extensions: 4895461 Number of successful extensions: 101292 Number of sequences better than 10.0: 64 Number of HSP's better than 10.0 without gapping: 65 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 101005 Number of HSP's gapped (non-prelim): 285 length of query: 635 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 612 effective length of database: 17,143,297,704 effective search space: 10491698194848 effective search space used: 10491698194848 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)