ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags19m16 |
|---|---|
| Clone Library Name | barley_pub |
>IBB_HORVU (P12940) Bowman-Birk type trypsin inhibitor| Length = 124 Score = 89.7 bits (221), Expect = 4e-18 Identities = 35/60 (58%), Positives = 44/60 (73%) Frame = +2 Query: 23 RPWKCCDFGVCYRALPRACRCLDEVEQCAPTCKSCQPAPSDPSRHVCNDRYTGDIGPTCT 202 RPW+CCD +C R+ P CRC+DEV++CAPTCK+C P+ S PSR VC D Y G + P CT Sbjct: 63 RPWECCDKAICTRSNPPTCRCVDEVKKCAPTCKTCLPSRSRPSRRVCIDSYFGPVPPRCT 122 Score = 87.0 bits (214), Expect = 3e-17 Identities = 35/59 (59%), Positives = 41/59 (69%) Frame = +2 Query: 23 RPWKCCDFGVCYRALPRACRCLDEVEQCAPTCKSCQPAPSDPSRHVCNDRYTGDIGPTC 199 RPWKCCD VC R++P C C+DEV +C TCKSC P DPSR +C D+Y GD GP C Sbjct: 5 RPWKCCDEAVCTRSIPPICTCMDEVFECPKTCKSCGPM-GDPSRRICQDQYVGDPGPIC 62
>IBB2_WHEAT (P09864) Bowman-Birk type proteinase inhibitor II-4 (Fragment)| Length = 53 Score = 81.6 bits (200), Expect = 1e-15 Identities = 32/51 (62%), Positives = 36/51 (70%) Frame = +2 Query: 23 RPWKCCDFGVCYRALPRACRCLDEVEQCAPTCKSCQPAPSDPSRHVCNDRY 175 RPWKCCD +C ++ P CRC+D VEQCA TCK C PA SD SR VC D Y Sbjct: 3 RPWKCCDRAICTKSFPPMCRCMDMVEQCAATCKKCGPATSDSSRRVCEDXY 53
>IBB1_COILA (P07679) Bowman-Birk type trypsin inhibitor TI1| Length = 64 Score = 81.3 bits (199), Expect = 1e-15 Identities = 30/59 (50%), Positives = 43/59 (72%) Frame = +2 Query: 23 RPWKCCDFGVCYRALPRACRCLDEVEQCAPTCKSCQPAPSDPSRHVCNDRYTGDIGPTC 199 RPW+CCD +C R++P CRC+D+V++C+ CK C+ ++ +RHVC D Y GD GPTC Sbjct: 5 RPWECCDIAMCTRSIPPICRCVDKVDRCSDACKDCE--ETEDNRHVCFDTYIGDPGPTC 61
>IBB1_WHEAT (P09863) Bowman-Birk type proteinase inhibitor I-2B (Fragment)| Length = 56 Score = 80.5 bits (197), Expect = 2e-15 Identities = 30/51 (58%), Positives = 38/51 (74%) Frame = +2 Query: 23 RPWKCCDFGVCYRALPRACRCLDEVEQCAPTCKSCQPAPSDPSRHVCNDRY 175 RPWKCCD VC R++P CRC+D+V +C TCK+C P+ DPSR VC D+Y Sbjct: 5 RPWKCCDQAVCTRSIPPICRCMDQVFECPSTCKACGPSVGDPSRRVCQDQY 55
>IBB3_SETIT (P22737) Bowman-Birk type trypsin inhibitor 3 (Bowman-Birk type| trypsin inhibitor III) (FMTI-III) Length = 67 Score = 73.9 bits (180), Expect = 2e-13 Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Frame = +2 Query: 23 RPWKCCDFGVCYRALPRACRCLDEVEQCAPTCKSC-QPAPSDPSRHVCNDRYTGDIGPTC 199 RPWKCCD C +++P CRC D +EQC+ CK C + SDP R++C D Y G P C Sbjct: 4 RPWKCCDLQTCTKSIPAFCRCRDLLEQCSDACKECGKVRDSDPPRYICQDVYRGIPAPMC 63 Query: 200 TE 205 E Sbjct: 64 HE 65
>IBB2_SETIT (P19860) Bowman-Birk type major trypsin inhibitor (FMTI-II)| Length = 67 Score = 73.9 bits (180), Expect = 2e-13 Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Frame = +2 Query: 23 RPWKCCDFGVCYRALPRACRCLDEVEQCAPTCKSC-QPAPSDPSRHVCNDRYTGDIGPTC 199 RPWKCCD C +++P CRC D +EQC+ CK C + SDP R++C D Y G P C Sbjct: 4 RPWKCCDLQTCTKSIPAFCRCRDLLEQCSDACKECGKVRDSDPPRYICQDVYRGIPAPMC 63 Query: 200 TE 205 E Sbjct: 64 HE 65
>IBBR_ORYSA (P07084) Bowman-Birk type bran trypsin inhibitor precursor (RBTI)| (OSE727A) Length = 195 Score = 72.0 bits (175), Expect = 9e-13 Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 2/61 (3%) Frame = +2 Query: 23 RPW-KCCDFGVCYRALPRACRCLDEVEQCAPTCKSCQPA-PSDPSRHVCNDRYTGDIGPT 196 R W CCD C + P CRC+DEV++CA CK CQ S+P R+VC DR+TG GP Sbjct: 129 RTWGDCCDKAFCNKMNPPTCRCMDEVKECADACKDCQRVESSEPPRYVCKDRFTGHPGPV 188 Query: 197 C 199 C Sbjct: 189 C 189 Score = 54.7 bits (130), Expect = 1e-07 Identities = 31/71 (43%), Positives = 38/71 (53%), Gaps = 6/71 (8%) Frame = +2 Query: 8 GRRXXRPWKCCDF--GVCYRALPRACRCLDEVE--QCAPTCKSCQPAPSD-PSRHVCNDR 172 G +PWKCCD + + P RC DE+E QC CKSC+ AP P + +C D Sbjct: 57 GLSMEKPWKCCDNIERLPTKTNPPQWRCNDELEPSQCTAACKSCREAPGPFPGKLICEDI 116 Query: 173 YTG-DIGPTCT 202 Y G D GP CT Sbjct: 117 YWGADPGPFCT 127 Score = 42.7 bits (99), Expect = 6e-04 Identities = 23/49 (46%), Positives = 27/49 (55%), Gaps = 4/49 (8%) Frame = +2 Query: 68 PRACRCLDEVEQCAPTCKSCQPAPS---DPSRHVCNDRY-TGDIGPTCT 202 P RC DEV+QCA CK C AP + VC+D + T D GP CT Sbjct: 4 PPLYRCNDEVKQCAAACKECVEAPGGDFNGGAFVCSDWFSTVDPGPKCT 52
>IBB_MEDSC (P80321) Bowman-Birk type proteinase inhibitor (MSTI)| Length = 62 Score = 47.8 bits (112), Expect = 2e-05 Identities = 23/56 (41%), Positives = 30/56 (53%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLDEVEQCAPTCKSCQPAPSDPSRHVCNDRYTGDIGPTCT 202 CCDF C R++P C+C D E+C CKSC S P + C D T P+C+ Sbjct: 8 CCDFCPCTRSIPPQCQCTDVREKCHSACKSCLCTRSFPPQCRCYD-ITDFCYPSCS 62
>IBB_LENCU (Q8W4Y8) Bowman-Birk type proteinase inhibitor precursor| (Trypsin/chymotrypsin inhibitor) Length = 110 Score = 45.4 bits (106), Expect = 9e-05 Identities = 19/47 (40%), Positives = 25/47 (53%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLDEVEQCAPTCKSCQPAPSDPSRHVCNDRY 175 CCD +C R+ P CRC+D E C C C A S+P + C D + Sbjct: 50 CCDTCLCTRSQPPTCRCVDVRESCHSACDKCVCAYSNPPQCQCYDTH 96
>IBB_PHALU (P01056) Bowman-Birk type proteinase inhibitor| Length = 83 Score = 44.7 bits (104), Expect = 1e-04 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLD-EVEQCAPTCKSCQPAPSDPSRHVCND 169 CC+ C +++P CRC D ++ C CKSC S P++ VC++ Sbjct: 18 CCBHCACTKSIPPQCRCTDLRLDSCHSACKSCICTLSIPAQCVCBB 63
>IBBWT_MEDSA (P16346) Bowman-Birk type wound-induced trypsin inhibitor| Length = 58 Score = 44.7 bits (104), Expect = 1e-04 Identities = 19/45 (42%), Positives = 24/45 (53%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLDEVEQCAPTCKSCQPAPSDPSRHVCND 169 CC+F C R++P CRC D E C CK+C S P + C D Sbjct: 4 CCNFCPCTRSIPPQCRCTDIGETCHSACKTCLCTKSIPPQCHCAD 48
>IBBA_PEA (Q41065) Seed trypsin/chymotrypsin inhibitor IVA precursor (PSTI| IVA) (TI12-36) [Contains: Seed trypsin/chymotrypsin inhibitor I (PSTI I)] (Fragment) Length = 96 Score = 44.7 bits (104), Expect = 1e-04 Identities = 19/47 (40%), Positives = 26/47 (55%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLDEVEQCAPTCKSCQPAPSDPSRHVCNDRY 175 CCD +C ++ P CRC+D E C C SC A S+P + C D + Sbjct: 32 CCDTCLCTKSNPPTCRCVDVRETCHSACDSCICAYSNPPKCQCFDTH 78
>IBB_VICFA (P24661) Bowman-Birk type proteinase inhibitor (FBI)| Length = 63 Score = 44.3 bits (103), Expect = 2e-04 Identities = 18/47 (38%), Positives = 26/47 (55%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLDEVEQCAPTCKSCQPAPSDPSRHVCNDRY 175 CCD +C ++ P CRC+D E+C C SC S+P + C D + Sbjct: 8 CCDTCLCTKSEPPTCRCVDVGERCHSACNSCVCRYSNPPKCQCFDTH 54
>IBBB_PEA (P56679) Seed trypsin/chymotrypsin inhibitor IVB (PSTI-IVB)| [Contains: Seed trypsin/chymotrypsin inhibitor II (PSTI II)] Length = 72 Score = 43.9 bits (102), Expect = 3e-04 Identities = 19/45 (42%), Positives = 25/45 (55%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLDEVEQCAPTCKSCQPAPSDPSRHVCND 169 CCD +C ++ P CRC+D E C C SC A S+P + C D Sbjct: 8 CCDTCLCTKSNPPTCRCVDVGETCHSACLSCICAYSNPPKCQCFD 52
>IBB_VICAN (P01065) Bowman-Birk type proteinase inhibitor (VAI)| Length = 72 Score = 43.1 bits (100), Expect = 4e-04 Identities = 18/47 (38%), Positives = 25/47 (53%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLDEVEQCAPTCKSCQPAPSDPSRHVCNDRY 175 CCD +C R+ P CRC+D E+C C C S+P + C D + Sbjct: 8 CCDTCLCTRSQPPTCRCVDVGERCHSACNHCVCNYSNPPQCQCFDTH 54
>IBB4_DOLAX (P01059) Bowman-Birk type proteinase inhibitor DE-4| Length = 76 Score = 42.4 bits (98), Expect = 7e-04 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLD-EVEQCAPTCKSCQPAPSDPSRHVCND 169 CCD C +++P C C D + C CKSC A S+P++ C D Sbjct: 15 CCDLCTCTKSIPPQCHCNDMRLNSCHSACKSCICALSEPAQCFCVD 60
>IBB2_PEA (Q41066) Seed trypsin/chymotrypsin inhibitor TI5-72 precursor| Length = 114 Score = 42.4 bits (98), Expect = 7e-04 Identities = 19/47 (40%), Positives = 25/47 (53%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLDEVEQCAPTCKSCQPAPSDPSRHVCNDRY 175 CCD +C ++ P CRC+D E C C SC A S P + C D + Sbjct: 50 CCDTCLCTKSDPPTCRCVDVGETCHSACDSCICALSYPPQCQCFDTH 96
>IBB2_PHAAN (P01061) Bowman-Birk type proteinase inhibitors I-A, I-B, and I-A'| Length = 78 Score = 42.0 bits (97), Expect = 0.001 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLD-EVEQCAPTCKSCQPAPSDPSRHVCNDRY 175 CCD +C +++P C+C D ++ C CKSC S P + C D + Sbjct: 18 CCDLCLCTKSIPPQCQCADIRLDSCHSACKSCMCTRSMPGQCRCLDTH 65 Score = 33.1 bits (74), Expect = 0.44 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 Query: 38 CDFGVCYRALPRACRCLDEVEQCAPTCKS 124 C +C R++P CRCLD + C CKS Sbjct: 46 CKSCMCTRSMPGQCRCLDTHDFCHKPCKS 74
>IBB1_PHAAN (P01058) Bowman-Birk type proteinase inhibitor| Length = 82 Score = 41.6 bits (96), Expect = 0.001 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLD-EVEQCAPTCKSCQPAPSDPSRHVCND 169 CCD C +++P CRC D + C CKSC S P++ C D Sbjct: 18 CCDQCSCTKSMPPKCRCSDIRLNSCHSACKSCACTYSIPAKCFCTD 63
>IBBD2_SOYBN (P01064) Bowman-Birk type proteinase inhibitor D-II precursor (IV)| Length = 83 Score = 41.2 bits (95), Expect = 0.002 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLD-EVEQCAPTCKSCQPAPSDPSRHVCND 169 CCD +C R++P C C D + C CKSC S P + C D Sbjct: 24 CCDLCMCTRSMPPQCSCEDIRLNSCHSDCKSCMCTRSQPGQCRCLD 69 Score = 31.6 bits (70), Expect = 1.3 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +2 Query: 38 CDFGVCYRALPRACRCLDEVEQCAPTCKS 124 C +C R+ P CRCLD + C CKS Sbjct: 52 CKSCMCTRSQPGQCRCLDTNDFCYKPCKS 80
>IBB_DOLBI (Q9S9E3) Horsegram inhibitor 1 (Horsegram inhibitor I) (Bowman-Birk| type proteinase inhibitor HGI-I) [Contains: Horsegram germinated inhibitor 1 (Horsegram germinated inhibitor I) (HGGI-I); Horsegram germinated inhibitor 2 (Horsegram germinated Length = 76 Score = 40.4 bits (93), Expect = 0.003 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLD-EVEQCAPTCKSCQPAPSDPSRHVCND 169 CCD C +++P CRC D + C C SC S P++ VC D Sbjct: 16 CCDQCTCTKSIPPQCRCTDVRLNSCHSACSSCVCTFSIPAQCVCVD 61
>IBB3_DOLAX (P01057) Bowman-Birk type proteinase inhibitor DE-3| Length = 76 Score = 40.4 bits (93), Expect = 0.003 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLD-EVEQCAPTCKSCQPAPSDPSRHVCND 169 CCD C +++P CRC D + C C SC S P++ VC D Sbjct: 16 CCDECACTKSIPPQCRCTDVRLNSCHSACSSCVCTFSIPAQCVCVD 61
>IBB_ERYVA (P81705) Bowman-Birk type proteinase inhibitor (EBI)| Length = 61 Score = 40.0 bits (92), Expect = 0.004 Identities = 19/48 (39%), Positives = 25/48 (52%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLDEVEQCAPTCKSCQPAPSDPSRHVCNDRYT 178 CCD C ++ P C+C D E C CK C A S P++ C D+ T Sbjct: 4 CCDKCFCTKSNPPICQCRDVGETCHSACKFCICALSYPAQCHCLDQNT 51 Score = 29.3 bits (64), Expect = 6.4 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = +2 Query: 38 CDFGVCYRALPRACRCLDEVEQCAPTCKS 124 C F +C + P C CLD+ C C S Sbjct: 31 CKFCICALSYPAQCHCLDQNTFCYDKCDS 59
>IBB1_SOYBN (P01055) Bowman-Birk type proteinase inhibitor precursor (BBI)| Length = 110 Score = 39.7 bits (91), Expect = 0.005 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLD-EVEQCAPTCKSCQPAPSDPSRHVCND 169 CCD C ++ P CRC D + C CKSC A S P++ C D Sbjct: 47 CCDQCACTKSNPPQCRCSDMRLNSCHSACKSCICALSYPAQCFCVD 92
>IBB4_PHAVU (P81483) Bowman-Birk type proteinase inhibitor PVI-4| Length = 85 Score = 39.7 bits (91), Expect = 0.005 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLD-EVEQCAPTCKSCQPAPSDPSRHVCND 169 CC+ C +++P CRC + + C CK C S P++ +C D Sbjct: 22 CCBHCACTKSIPPQCRCSBLRLNSCHSECKGCICTFSIPAQCICTD 67
>IBB3_PHAVU (P81484) Bowman-Birk type proteinase inhibitor PVI-3(2)| Length = 85 Score = 39.7 bits (91), Expect = 0.005 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLD-EVEQCAPTCKSCQPAPSDPSRHVCND 169 CC+ C +++P CRC + + C CK C S P++ +C D Sbjct: 21 CCBHCACTKSIPPQCRCSBLRLNSCHSECKGCICTFSIPAQCICTD 66
>IBB3_WHEAT (P81713) Bowman-Birk type trypsin inhibitor (WTI)| Length = 71 Score = 39.3 bits (90), Expect = 0.006 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%) Frame = +2 Query: 29 WKCCD-FGVCYRALPRACRCLD-EVEQCAPTCKSC 127 W CCD G C R +P C C+D C P CK+C Sbjct: 8 WPCCDECGTCTRMIPPRCTCMDVSPSGCHPACKNC 42
>IBB2_PHAVU (P01060) Bowman-Birk type proteinase inhibitor 2 (Bowman-Birk type| proteinase inhibitor II) Length = 79 Score = 37.7 bits (86), Expect = 0.018 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLD-EVEQCAPTCKSCQPAPSDPSRHVCND 169 CC+ VC ++P C C + ++ C CKSC S P + C + Sbjct: 17 CCBICVCTASIPPQCVCTBIRLBSCHSACKSCMCTRSMPGKCRCLB 62 Score = 34.7 bits (78), Expect = 0.15 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +2 Query: 38 CDFGVCYRALPRACRCLDEVEQCAPTCKS 124 C +C R++P CRCL+ + C +CKS Sbjct: 45 CKSCMCTRSMPGKCRCLBTTBYCYKSCKS 73
>IBB1_AMBAC (P83284) Bowman-birk type proteinase inhibitor (TaTI)| Length = 63 Score = 37.7 bits (86), Expect = 0.018 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLD-EVEQCAPTCKSCQPAPSDPSRHVCND 169 CCD C +++P C C D + C C+SC S P++ C D Sbjct: 7 CCDRCACTKSIPPQCHCADIRLNSCHSACESCACTRSIPAKCRCFD 52 Score = 29.6 bits (65), Expect = 4.9 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = +2 Query: 38 CDFGVCYRALPRACRCLDEVEQCAPTC 118 C+ C R++P CRC D + C C Sbjct: 35 CESCACTRSIPAKCRCFDITDFCYKPC 61
>IBB2_AMBCE (P83283) Bowman-birk type proteinase inhibitor 2 (TcTI2)| Length = 63 Score = 37.4 bits (85), Expect = 0.023 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLD-EVEQCAPTCKSCQPAPSDPSRHVCND 169 CCD C +++P C C D + C C+SC S P++ C D Sbjct: 7 CCDRCACTKSIPPQCHCADIRLNSCHSACESCACTHSIPAQCRCFD 52
>IBB1_ARAHY (P01066) Bowman-Birk type proteinase inhibitor A-II [Contains:| Bowman-Birk type proteinase inhibitor A-I; Bowman-Birk type proteinase inhibitor B-I; Bowman-Birk type proteinase inhibitor B-III] Length = 70 Score = 37.4 bits (85), Expect = 0.023 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = +2 Query: 35 CCDFGVCYRALPR--ACRCLDEVEQCAPTCKSCQPAPSDPSRHVCNDRYTG 181 CC+ +C R P C C+D + C +C SC S+P + C D+ G Sbjct: 11 CCNGCLCDRRAPPYFECVCVDTFDHCPASCNSCVCTRSNPPQCRCTDKTQG 61
>IBBC2_SOYBN (P01063) Bowman-Birk type proteinase inhibitor C-II precursor| Length = 83 Score = 36.2 bits (82), Expect = 0.052 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +2 Query: 38 CDFGVCYRALPRACRCLDEVEQCAPTCKS 124 CD C R++P CRCLD + C CKS Sbjct: 49 CDRCACTRSMPGQCRCLDTTDFCYKPCKS 77 Score = 34.7 bits (78), Expect = 0.15 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLD-EVEQCAPTCKSCQPAPSDPSRHVCND 169 CCD +C ++P C C D + C C C S P + C D Sbjct: 21 CCDLCMCTASMPPQCHCADIRLNSCHSACDRCACTRSMPGQCRCLD 66
>IBB4_LONCA (P16343) Bowman-Birk type proteinase inhibitor DE-4 (DE4)| Length = 80 Score = 36.2 bits (82), Expect = 0.052 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLD-EVEQCAPTCKSCQPAPSDPSRHVCND 169 CC C R+ P C+C D + C CKSC SDP C D Sbjct: 18 CCS-SCCTRSRPPQCQCTDVRLNSCHSACKSCMCTFSDPGMCSCLD 62
>GATB_BOMMO (P52167) Transcription factor BCFI (GATA-beta) (BmGATA-beta)| Length = 508 Score = 35.8 bits (81), Expect = 0.068 Identities = 20/44 (45%), Positives = 23/44 (52%) Frame = +3 Query: 15 EXXGRGNAATSVCATVRFRGRAAALTRSSSVLRPARAASRHRPI 146 E G GN A S C VR + R A L + S LRPA A R R + Sbjct: 113 EQGGGGNGAASRCTAVRLQQRRAILHQRSRPLRPAAALDRVRRV 156
>IBB_VIGUN (P17734) Bowman-Birk type seed trypsin and chymotrypsin inhibitor| (BTCI) Length = 83 Score = 35.4 bits (80), Expect = 0.089 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLD-EVEQCAPTCKSCQPAPSDPSRHVCND 169 CC C +++P CRC + + C CKSC S P+ C + Sbjct: 18 CCRZCACTKSIPPZCRCSZVRLNSCHSACKSCACTFSIPAZCFCGB 63
>IBB_PHAAU (P01062) Bowman-Birk type trypsin inhibitor| Length = 72 Score = 35.4 bits (80), Expect = 0.089 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLD-EVEQCAPTCKSCQPAPSDPSRHVCND 169 CCD C +++P C C + + C CKSC S P + C D Sbjct: 12 CCDSCDCTKSIPPECHCANIRLNSCHSACKSCICTRSMPGKCRCLD 57 Score = 32.3 bits (72), Expect = 0.75 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +2 Query: 38 CDFGVCYRALPRACRCLDEVEQCAPTCKS 124 C +C R++P CRCLD + C C+S Sbjct: 40 CKSCICTRSMPGKCRCLDTDDFCYKPCES 68
>IBB_PHAAT (P83311) Bowman-Birk type proteinase inhibitor (TBPI-B)| Length = 80 Score = 34.7 bits (78), Expect = 0.15 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLDEVEQCAPTCKSCQPAPSDPSRHVCND 169 CCD C +++P CRC + C+SC S P++ VC D Sbjct: 19 CCDHCACTKSIPPQCRCALRLN--CNHCRSCICTFSIPAQCVCTD 61
>IBB2_ARAHY (P01067) Bowman-Birk type proteinase inhibitor B-II| Length = 63 Score = 34.7 bits (78), Expect = 0.15 Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 2/51 (3%) Frame = +2 Query: 35 CCDFGVCYRALPR--ACRCLDEVEQCAPTCKSCQPAPSDPSRHVCNDRYTG 181 CC +C R P C C D + C C C S P + C DR G Sbjct: 5 CCSACICDRRAPPYFECTCGDTFDHCPAACNKCVCTRSIPPQCRCTDRTQG 55
>CRUM2_HUMAN (Q5IJ48) Crumbs homolog 2 precursor (Crumbs-like protein 2)| Length = 1285 Score = 33.1 bits (74), Expect = 0.44 Identities = 33/113 (29%), Positives = 41/113 (36%), Gaps = 1/113 (0%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLDEVEQCAPTCKS-CQPAPSDPSRHVCNDRYTGDIGPTCTETV 211 C + G C + LP +C PTC+ SDP H G TC++TV Sbjct: 329 CLNGGHC-QDLPNGFQCHCPDGYAGPTCEEDVDECLSDPCLH----------GGTCSDTV 377 Query: 212 AAAILNYGAQGTGQDAQVIVAGGN*PACALIRHLINAVQPELESLQQPAVCAC 370 A I G+D V + G C L I P ES VC C Sbjct: 378 AGYICRCPETWGGRDCSVQLTGCQGHTCPLAATCI----PIFESGVHSYVCHC 426
>STAB2_RAT (Q8CFM6) Stabilin-2 precursor (Hyaluronan receptor for endocytosis)| [Contains: 175 kDa stabilin-2 (175 kDa hyaluronan receptor for endocytosis)] (Fragment) Length = 1431 Score = 32.0 bits (71), Expect = 0.98 Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 13/94 (13%) Frame = +2 Query: 23 RPWKCCDFGVCYRALPRACRCLDEVEQCAPTCKS-------CQPAPS------DPSRHVC 163 +P C + G C + + CL E A +C + C PA S + + VC Sbjct: 875 QPRSCSEHGQCDEGITGSGECLCETGWTAASCDTPTAVFAVCTPACSVHATCTENNTCVC 934 Query: 164 NDRYTGDIGPTCTETVAAAILNYGAQGTGQDAQV 265 N Y GD G TCT ++++ Q G A+V Sbjct: 935 NLNYEGD-GITCT------VVDFCKQNNGGCAKV 961
>IBBWP_MAIZE (P31862) Bowman-Birk type wound-induced proteinase inhibitor WIP1| precursor Length = 102 Score = 32.0 bits (71), Expect = 0.98 Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 4/60 (6%) Frame = +2 Query: 32 KCCDFGVCYRALPRACRCLDEVEQCAPTCKSCQPAP----SDPSRHVCNDRYTGDIGPTC 199 KCC C + C D + C P CK C A S ++ C D + G GP C Sbjct: 45 KCCTN--CNFSFSGLYTCDDVKKDCDPVCKKCVVAVHASYSGNNKFRCTDTFLGMCGPKC 102
>IBB1_DIOGL (P82469) Bowman-Birk type proteinase inhibitor 1 (Bowman-Birk type| proteinase inhibitor I) (DgTI) Length = 67 Score = 32.0 bits (71), Expect = 0.98 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Frame = +2 Query: 35 CCDFGVCYRALPRACRCLD-EVEQCAPTCKSCQPAPSDPSRHVCND 169 CCD C ++ P C+C D + C C++C + S P C D Sbjct: 5 CCDRCRCTKSEPPQCQCQDVRLNSCHSACEACVCSHSMPGLCSCLD 50 Score = 30.8 bits (68), Expect = 2.2 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +2 Query: 38 CDFGVCYRALPRACRCLDEVEQCAPTCKS 124 C+ VC ++P C CLD C CKS Sbjct: 33 CEACVCSHSMPGLCSCLDITHFCHEPCKS 61
>NAS27_CAEEL (O17264) Zinc metalloproteinase nas-27 precursor (EC 3.4.24.21)| (Nematode astacin 27) Length = 428 Score = 31.6 bits (70), Expect = 1.3 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 4/37 (10%) Frame = +2 Query: 98 EQCAPTCKSCQ----PAPSDPSRHVCNDRYTGDIGPT 196 E+CA T CQ PAPSD S+ VC D + G+ T Sbjct: 256 ERCANTLNRCQQGGYPAPSDCSQCVCPDGFGGNFCET 292
>MUA3_CAEEL (P34576) Transmembrane cell adhesion receptor mua-3 precursor (Muscle| attachment abnormal protein 3) Length = 3767 Score = 31.6 bits (70), Expect = 1.3 Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 10/70 (14%) Frame = +2 Query: 35 CCDFGVCYRALPRACRC------LDEVEQCAPTCKSCQPAP--SDPSRHVCNDRYTGDIG 190 C +CY PR RC +D + + C+P P S P RH C D D Sbjct: 2468 CSRNAICYDE-PRGYRCECKRGFMDRSPDSSQRGRVCEPPPPPSPPPRHPCQDPERNDCH 2526 Query: 191 P--TCTETVA 214 P TC T A Sbjct: 2527 PAGTCRATGA 2536
>RUVC_TREPA (O83530) Crossover junction endodeoxyribonuclease ruvC (EC| 3.1.22.4) (Holliday junction nuclease ruvC) (Holliday juction resolvase ruvC) Length = 196 Score = 31.6 bits (70), Expect = 1.3 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 14/76 (18%) Frame = +2 Query: 182 DIGPTCTETVAAAI-LNYGAQGTGQDA-------------QVIVAGGN*PACALIRHLIN 319 DI P T TV+ + ++ G + TG VIV N P+ A +RH+ + Sbjct: 7 DIAPGSTSTVSIIVGIDPGLESTGYGVIEAGGGSLRCLTYGVIVTQSNQPSAARLRHIFD 66 Query: 320 AVQPELESLQQPAVCA 367 +Q ++ S+ QP CA Sbjct: 67 TLQ-QVISIYQPQYCA 81
>LRP1_HUMAN (Q07954) Low-density lipoprotein receptor-related protein 1 precursor| (LRP) (Alpha-2-macroglobulin receptor) (A2MR) (Apolipoprotein E receptor) (APOER) (CD91 antigen) Length = 4544 Score = 30.8 bits (68), Expect = 2.2 Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 10/98 (10%) Frame = +2 Query: 32 KCCDFGVCY---RALPRACRCLD-------EVEQCAPTCKSCQPAPSDPSRHVCNDRYTG 181 +C + G C+ R P+ CRC E++QC C++ + PS TG Sbjct: 4203 QCFNGGSCFLNARRQPK-CRCQPRYTGDKCELDQCWEHCRNGGTCAASPSGMPTCRCPTG 4261 Query: 182 DIGPTCTETVAAAILNYGAQGTGQDAQVIVAGGN*PAC 295 GP CT+ V A ++ V GN P C Sbjct: 4262 FTGPKCTQQVCAGY-------CANNSTCTVNQGNQPQC 4292
>MKRN2_BRARE (Q9DFG8) Makorin-2| Length = 414 Score = 30.0 bits (66), Expect = 3.7 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -3 Query: 128 GSSCRSEHTARPRQGSGTPAEAHGSTHRSRSISTA 24 G CR +H P +GSG PA+ H +RS S+A Sbjct: 48 GDRCRYDHIKPPGRGSGAPAD-----HSNRSSSSA 77
>STAB2_HUMAN (Q8WWQ8) Stabilin-2 precursor (FEEL-2 protein) (Fasciclin EGF-like| laminin-type EGF-like and link domain-containing scavenger receptor 1) (FAS1 EGF-like and X-link domain-containing adhesion molecule 2) (Hyaluronan receptor for endocytosis) [ Length = 2551 Score = 29.6 bits (65), Expect = 4.9 Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 13/93 (13%) Frame = +2 Query: 26 PWKCCDFGVCYRALPRACRCLDEVEQCAPTC--KSCQPAPSDP--SRHV---------CN 166 P C D G C + + +CL E P+C ++ PA P S H CN Sbjct: 2011 PCGCSDHGQCDDGITGSGQCLCETGWTGPSCDTQAVLPAVCTPPCSAHATCKENNTCECN 2070 Query: 167 DRYTGDIGPTCTETVAAAILNYGAQGTGQDAQV 265 Y GD G TCT ++++ Q G A+V Sbjct: 2071 LDYEGD-GITCT------VVDFCKQDNGGCAKV 2096
>NID1_HUMAN (P14543) Nidogen-1 precursor (Entactin)| Length = 1247 Score = 29.6 bits (65), Expect = 4.9 Identities = 25/96 (26%), Positives = 36/96 (37%), Gaps = 7/96 (7%) Frame = +2 Query: 38 CDFGVCYRALPRACRCLDEVEQCAPTCKSCQPAPSDPS--RHVCNDRYTGDIGPTCTETV 211 C+ + +R R C +DE + C S + P R C + Y TC V Sbjct: 695 CECSIGFRGDGRTCYDIDECSEQPSVCGSHTICNNHPGTFRCECVEGYQFSDEGTCVAVV 754 Query: 212 AAAILNYGAQG-----TGQDAQVIVAGGN*PACALI 304 +NY G Q AQ I GG+ C+ + Sbjct: 755 DQRPINYCETGLHNCDIPQRAQCIYTGGSSYTCSCL 790
>LAMB1_DROME (P11046) Laminin beta-1 chain precursor (Laminin B1 chain)| Length = 1790 Score = 29.6 bits (65), Expect = 4.9 Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 12/76 (15%) Frame = +2 Query: 71 RACRCLDEVEQCAP---TCKSCQPAPSDPSRHVCNDRYTG------DIG---PTCTETVA 214 R C+C C P TC CQ + + S C D Y G +IG C ETVA Sbjct: 883 RVCQCNGHAATCDPIQGTCIDCQDSTTGYSCDSCLDGYYGNPLFGSEIGCRPCRCPETVA 942 Query: 215 AAILNYGAQGTGQDAQ 262 + + + A G D + Sbjct: 943 SGLAH--ADGCSLDTR 956
>KITH_BACFR (Q64YL9) Thymidine kinase (EC 2.7.1.21)| Length = 199 Score = 29.6 bits (65), Expect = 4.9 Identities = 19/64 (29%), Positives = 24/64 (37%), Gaps = 5/64 (7%) Frame = +2 Query: 47 GVCYRALPRACRCLDEVEQCAPTCKSCQPAPSDPSRHVCNDRY-----TGDIGPTCTETV 211 GV + +P C DEV + C C S R V ND+ T P C E Sbjct: 129 GVPFGPMPALCAIADEVSKVHAICVKCGQLASFSHRTVKNDKQVLLGETAQYEPLCRECY 188 Query: 212 AAAI 223 A+ Sbjct: 189 QRAL 192
>MCSP_RAT (Q64298) Sperm mitochondrial-associated cysteine-rich protein| Length = 145 Score = 29.6 bits (65), Expect = 4.9 Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 1/69 (1%) Frame = +2 Query: 53 CYRALPRACRCLDEVEQCAPT-CKSCQPAPSDPSRHVCNDRYTGDIGPTCTETVAAAILN 229 C P AC C ++ C PT C C P + C + T + PTC + + Sbjct: 61 CPATCPAACACPCPMKPCCPTKCTCC------PKKCTCCPQPTCCVQPTCCSSENKTESD 114 Query: 230 YGAQGTGQD 256 G QD Sbjct: 115 SDGSGQTQD 123
>CEK1_SCHPO (P38938) Serine/threonine-protein kinase cek1 (EC 2.7.11.1)| Length = 1338 Score = 29.6 bits (65), Expect = 4.9 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = -3 Query: 158 HDGMDRTVPAGSSCRSEHTARPRQGSGTPAEAHGSTHRSR 39 H G+ T+ A S S HTA P GT ++ H + + R Sbjct: 1155 HKGVSSTMSASQSQSSMHTALPDVTEGTSSDEHTTIQKGR 1194
>YL688_MIMIV (Q5UNV2) Hypothetical protein L688| Length = 236 Score = 29.6 bits (65), Expect = 4.9 Identities = 14/38 (36%), Positives = 16/38 (42%) Frame = +2 Query: 29 WKCCDFGVCYRALPRACRCLDEVEQCAPTCKSCQPAPS 142 + C +G CY A CL C C S QP PS Sbjct: 28 YPCVTYGNCYTTC--ASPCLPYPTNCVQVCTSSQPCPS 63
>PGBM_MOUSE (Q05793) Basement membrane-specific heparan sulfate proteoglycan core| protein precursor (HSPG) (Perlecan) (PLC) Length = 3707 Score = 29.6 bits (65), Expect = 4.9 Identities = 24/74 (32%), Positives = 25/74 (33%), Gaps = 3/74 (4%) Frame = +2 Query: 47 GVCYRALPRACRCLDEVEQCAP---TCKSCQPAPSDPSRHVCNDRYTGDIGPTCTETVAA 217 G C R C C E C P C+SCQ S C Y GD T Sbjct: 1154 GTCER-----CNCHGHSETCEPETGACQSCQHHTEGASCEQCQPGYYGD-AQRGTPQDCQ 1207 Query: 218 AILNYGAQGTGQDA 259 YGA GQ A Sbjct: 1208 PCPCYGAPAAGQAA 1221
>RSPO3_BRARE (Q5R328) R-spondin-3 precursor (Roof plate-specific spondin-3)| (Cabriolet) Length = 317 Score = 29.6 bits (65), Expect = 4.9 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 3/61 (4%) Frame = +2 Query: 74 ACRCLDEVEQCAPTCKSCQPAP---SDPSRHVCNDRYTGDIGPTCTETVAAAILNYGAQG 244 AC L ++ Q + TC C P + HVC D + + C TV + + G Sbjct: 145 ACPALCDLCQNSDTCTRCVPGHFLHAGQCHHVCPDEFEPNDSMECIPTVHCEVSEWSEWG 204 Query: 245 T 247 T Sbjct: 205 T 205
>SALL1_HUMAN (Q9NSC2) Sal-like protein 1 (Zinc finger protein SALL1) (Spalt-like| transcription factor 1) (HSal1) Length = 1324 Score = 29.3 bits (64), Expect = 6.4 Identities = 17/51 (33%), Positives = 25/51 (49%) Frame = -3 Query: 176 CTGRCRHDGMDRTVPAGSSCRSEHTARPRQGSGTPAEAHGSTHRSRSISTA 24 C+ H+G+DR S E + GSGT + +H ST S S S++ Sbjct: 110 CSDLSEHNGLDRE----ESMEVEAPVANKSGSGTSSGSHSSTAPSSSSSSS 156
>KITH_BACFN (Q5LHP5) Thymidine kinase (EC 2.7.1.21)| Length = 199 Score = 29.3 bits (64), Expect = 6.4 Identities = 18/64 (28%), Positives = 24/64 (37%), Gaps = 5/64 (7%) Frame = +2 Query: 47 GVCYRALPRACRCLDEVEQCAPTCKSCQPAPSDPSRHVCNDRY-----TGDIGPTCTETV 211 G+ + +P C DEV + C C S R V ND+ T P C E Sbjct: 129 GIPFGPMPALCAIADEVSKVHAICVKCGQLASFSHRTVKNDKQVLLGETAQYEPLCRECY 188 Query: 212 AAAI 223 A+ Sbjct: 189 QRAL 192
>TILS_LEPIN (Q8F9P6) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 433 Score = 29.3 bits (64), Expect = 6.4 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = -1 Query: 313 QVPDQRASWLVTAGHNHLGVLTSTLGSIVEYGGGNSLRARGPY 185 ++ DQ ++VT GH+ L + L +++ GG NSLR G Y Sbjct: 124 KISDQYEGYIVT-GHHSSDYLETILLNLIRGGGWNSLRTLGWY 165
>TILS_LEPIC (Q72W10) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 433 Score = 29.3 bits (64), Expect = 6.4 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = -1 Query: 313 QVPDQRASWLVTAGHNHLGVLTSTLGSIVEYGGGNSLRARGPY 185 ++ DQ ++VT GH+ L + L +++ GG NSLR G Y Sbjct: 124 KISDQYEGYIVT-GHHSSDYLETILLNLIRGGGWNSLRTLGWY 165
>CAC1H_MOUSE (O88427) Voltage-dependent T-type calcium channel alpha-1H subunit| (Voltage-gated calcium channel alpha subunit Cav3.2) Length = 2365 Score = 29.3 bits (64), Expect = 6.4 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +1 Query: 115 LQELPAGTVRSIPSCLQRPVHRRYRAHVHGDCC 213 + + P GT+RS P C RP R R H G C Sbjct: 2050 MSQAPLGTLRS-PPCSPRPASVRTRKHTFGQHC 2081
>LAMA3_MOUSE (Q61789) Laminin alpha-3 chain precursor (Nicein alpha subunit)| Length = 3333 Score = 29.3 bits (64), Expect = 6.4 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = +1 Query: 106 CSDLQELPAGTVRSIPSCLQRPVHRRYRAHVHGDCC 213 CS+ Q AGT+ I C Q +AHV GD C Sbjct: 625 CSECQCHEAGTLSGIGECGQEDGDCSCKAHVTGDAC 660
>IRTF_HUMAN (Q00978) Transcriptional regulator ISGF3 gamma subunit (Interferon| regulatory factor 9) (IRF-9) (IFN-alpha-responsive transcription factor subunit) (Interferon-stimulated gene factor 3 gamma) (ISGF3 p48 subunit) (ISGF-3 gamma) Length = 393 Score = 29.3 bits (64), Expect = 6.4 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Frame = +1 Query: 7 GETKXXAVEMLRLRCVLPCASAGVPLP*RGRAVCSD----LQELPAGTVRSIPSCLQRPV 174 G+T AV RLRC L +S +P RGR ++ Q LP G V P + P Sbjct: 72 GDTGGPAVWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLLPPGIVSGQPGTQKVPS 131 Query: 175 HRRY 186 R++ Sbjct: 132 KRQH 135
>PGBM_HUMAN (P98160) Basement membrane-specific heparan sulfate proteoglycan core| protein precursor (HSPG) (Perlecan) (PLC) Length = 4391 Score = 29.3 bits (64), Expect = 6.4 Identities = 33/123 (26%), Positives = 39/123 (31%), Gaps = 3/123 (2%) Frame = +2 Query: 47 GVCYRALPRACRCLDEVEQCAPT---CKSCQPAPSDPSRHVCNDRYTGDIGPTCTETVAA 217 G C R C C E C P C+ CQ P C Y GD Sbjct: 1154 GTCER-----CSCHGHSEACEPETGACQGCQHHTEGPRCEQCQPGYYGD----------- 1197 Query: 218 AILNYGAQGTGQDAQVIVAGGN*PACALIRHLINAVQPELESLQQPAVCACKQ*NKNGSS 397 +GT QD Q+ G+ PA H L++ P AC G S Sbjct: 1198 -----AQRGTPQDCQLCPCYGD-PAAGQAAHTC-----FLDTDGHPTCDACSP----GHS 1242 Query: 398 GSH 406 G H Sbjct: 1243 GRH 1245
>LAMC3_MOUSE (Q9R0B6) Laminin gamma-3 chain precursor (Laminin 12 gamma 3| subunit) Length = 1581 Score = 28.9 bits (63), Expect = 8.3 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 5/45 (11%) Frame = +2 Query: 41 DFGVCYRALPRACRCLDEVEQC-----APTCKSCQPAPSDPSRHV 160 D G CY + RA RCL E E A +C P D HV Sbjct: 30 DMGSCYDGVGRAQRCLPEFENAAFGRRAEASHTCGRPPEDFCPHV 74
>POLG_FMDVS (P03311) Genome polyprotein [Contains: Coat protein VP3; Coat| protein VP1; Core protein p52; Protease (EC 3.4.22.-); RNA-directed RNA polymerase (EC 2.7.7.48)] (Fragments) Length = 861 Score = 28.9 bits (63), Expect = 8.3 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = +2 Query: 152 RHVCNDRYTGDIGPTCTETVAAAILNYGAQGTGQDAQVIVAG 277 RH D TG P T AIL++ +GT Q+ + VAG Sbjct: 779 RHFHMDYGTGFYKPVMTSKTLEAILSFARRGTIQEKLISVAG 820
>VE2_HPV47 (P22420) Regulatory protein E2| Length = 506 Score = 28.9 bits (63), Expect = 8.3 Identities = 25/71 (35%), Positives = 30/71 (42%) Frame = -3 Query: 218 RRQQSPCTWALYRRCTGRCRHDGMDRTVPAGSSCRSEHTARPRQGSGTPAEAHGSTHRSR 39 +R +SP T+ R G R G R AGSS E R R S +P S+ R R Sbjct: 329 QRSRSPSTYTSKRSREGNTRGRGRGRQGRAGSSGGREQRRRRRSFSTSP----DSSKRVR 384 Query: 38 SISTAXXFVSP 6 S VSP Sbjct: 385 RESPKYRGVSP 395
>HIW_DROME (Q9NB71) Ubiquitin ligase protein highwire (EC 6.3.2.-) (Protein| pam/highwire/rpm-1) Length = 5233 Score = 28.9 bits (63), Expect = 8.3 Identities = 18/58 (31%), Positives = 26/58 (44%) Frame = -1 Query: 250 TSTLGSIVEYGGGNSLRARGPYIAGVPVVADMTGWIGRCRLAALAGRSTLLDLVKAAA 77 + TL ++VE+ G+ GP A +GRCR L G S LL++ A Sbjct: 4882 SKTLKAMVEFRDGSHTIISGPQEA-----------VGRCRFCGLTGNSGLLEIGNVCA 4928 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,968,503 Number of Sequences: 219361 Number of extensions: 1617747 Number of successful extensions: 4887 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 4580 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4853 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3696665728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
