| Clone Name | bags19m04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_507554.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1124_D06.11-2 mRNA Length = 1218 Score = 406 bits (205), Expect = e-110 Identities = 480/571 (84%), Gaps = 3/571 (0%) Strand = Plus / Plus Query: 4 ccggcgagttcttcgtcgatcaccggtgcatcgactgcgccacctgccggtggatggcgc 63 ||||||| ||||||||||||||||| |||||||| ||| |||||||| |||||||| Sbjct: 180 ccggcgacttcttcgtcgatcaccgatgcatcgattgccagacctgccgctggatggctt 239 Query: 64 cggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcccagctccgagg 123 ||||||||||||||||||||||||| | ||||||| || |||||||||| |||||| | Sbjct: 240 cggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcccatctccgacg 299 Query: 124 agcagaggaccaaggcactgcaggctttgctctcttgcccaacagcatcgatccacaccg 183 | || ||||||||||| ||||||||| ||||||| || || || | || || ||||||| Sbjct: 300 aacacaggaccaaggccctgcaggctctgctctcctgtcctacttcctccattcacaccg 359 Query: 184 acaagccggcgaaggacattctccaagtgcagagcacgttcccgctccccatcgatgacg 243 | || || || ||||||||||| |||||||| | || |||||||||||||||||| | Sbjct: 360 agaaacctgcaaaggacattcttcaagtgcaaaacatgttcccgctccccatcgacaatc 419 Query: 244 atcttc---ctggtgtttatctttgcggttaccattccgaagactcatatggagcaacat 300 |||||| |||||||||| || || || || ||||| |||| |||||||||||||| | Sbjct: 420 atcttctccctggtgtttacctctgtggctatcattctcaagattcatatggagcaactt 479 Query: 301 cttatcttataattcacccagaaggaaacataatggttgacagtccaaggtatacgccga 360 |||||||| ||| || ||||| ||||||||| | |||||||| ||||||||||| ||| Sbjct: 480 cttatcttttaacccatccagatggaaacatactagttgacagcccaaggtatacaacga 539 Query: 361 aacttgtggacaagatcgaaaaactcggtggagcgcgctacatgtttttgacccacattg 420 |||| | || || ||||||||||| |||||||| ||||||||||||||||||||||| | Sbjct: 540 aactggcagagaacatcgaaaaacttggtggagcacgctacatgtttttgacccacatgg 599 Query: 421 atgatgtagcggatcatcggaagtgggctgagcggctgaaatgcgagagaatcatccatt 480 ||||||| ||||||||| ||||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 600 atgatgtcgcggatcataggaagtgggctgagcggctaaaatgtgagaggatcatccatt 659 Query: 481 caggagatgtagtggacattactgctgatgtcgagcggaaacttactggaagtggtccct 540 | || ||||||| ||| ||||||| ||||| ||| ||||||||||||||| ||| || | Sbjct: 660 cgggcgatgtagaggatgttactgcagatgttgagtggaaacttactggaaatggcccat 719 Query: 541 ggaacattggaaatgattttgaacttatcca 571 || |||||||| |||||| ||||||||||| Sbjct: 720 gggacattggagctgatttcgaacttatcca 750
>ref|XM_468525.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1218 Score = 406 bits (205), Expect = e-110 Identities = 480/571 (84%), Gaps = 3/571 (0%) Strand = Plus / Plus Query: 4 ccggcgagttcttcgtcgatcaccggtgcatcgactgcgccacctgccggtggatggcgc 63 ||||||| ||||||||||||||||| |||||||| ||| |||||||| |||||||| Sbjct: 180 ccggcgacttcttcgtcgatcaccgatgcatcgattgccagacctgccgctggatggctt 239 Query: 64 cggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcccagctccgagg 123 ||||||||||||||||||||||||| | ||||||| || |||||||||| |||||| | Sbjct: 240 cggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcccatctccgacg 299 Query: 124 agcagaggaccaaggcactgcaggctttgctctcttgcccaacagcatcgatccacaccg 183 | || ||||||||||| ||||||||| ||||||| || || || | || || ||||||| Sbjct: 300 aacacaggaccaaggccctgcaggctctgctctcctgtcctacttcctccattcacaccg 359 Query: 184 acaagccggcgaaggacattctccaagtgcagagcacgttcccgctccccatcgatgacg 243 | || || || ||||||||||| |||||||| | || |||||||||||||||||| | Sbjct: 360 agaaacctgcaaaggacattcttcaagtgcaaaacatgttcccgctccccatcgacaatc 419 Query: 244 atcttc---ctggtgtttatctttgcggttaccattccgaagactcatatggagcaacat 300 |||||| |||||||||| || || || || ||||| |||| |||||||||||||| | Sbjct: 420 atcttctccctggtgtttacctctgtggctatcattctcaagattcatatggagcaactt 479 Query: 301 cttatcttataattcacccagaaggaaacataatggttgacagtccaaggtatacgccga 360 |||||||| ||| || ||||| ||||||||| | |||||||| ||||||||||| ||| Sbjct: 480 cttatcttttaacccatccagatggaaacatactagttgacagcccaaggtatacaacga 539 Query: 361 aacttgtggacaagatcgaaaaactcggtggagcgcgctacatgtttttgacccacattg 420 |||| | || || ||||||||||| |||||||| ||||||||||||||||||||||| | Sbjct: 540 aactggcagagaacatcgaaaaacttggtggagcacgctacatgtttttgacccacatgg 599 Query: 421 atgatgtagcggatcatcggaagtgggctgagcggctgaaatgcgagagaatcatccatt 480 ||||||| ||||||||| ||||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 600 atgatgtcgcggatcataggaagtgggctgagcggctaaaatgtgagaggatcatccatt 659 Query: 481 caggagatgtagtggacattactgctgatgtcgagcggaaacttactggaagtggtccct 540 | || ||||||| ||| ||||||| ||||| ||| ||||||||||||||| ||| || | Sbjct: 660 cgggcgatgtagaggatgttactgcagatgttgagtggaaacttactggaaatggcccat 719 Query: 541 ggaacattggaaatgattttgaacttatcca 571 || |||||||| |||||| ||||||||||| Sbjct: 720 gggacattggagctgatttcgaacttatcca 750
>ref|XM_507553.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1124_D06.11-2 mRNA Length = 1334 Score = 406 bits (205), Expect = e-110 Identities = 480/571 (84%), Gaps = 3/571 (0%) Strand = Plus / Plus Query: 4 ccggcgagttcttcgtcgatcaccggtgcatcgactgcgccacctgccggtggatggcgc 63 ||||||| ||||||||||||||||| |||||||| ||| |||||||| |||||||| Sbjct: 179 ccggcgacttcttcgtcgatcaccgatgcatcgattgccagacctgccgctggatggctt 238 Query: 64 cggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcccagctccgagg 123 ||||||||||||||||||||||||| | ||||||| || |||||||||| |||||| | Sbjct: 239 cggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcccatctccgacg 298 Query: 124 agcagaggaccaaggcactgcaggctttgctctcttgcccaacagcatcgatccacaccg 183 | || ||||||||||| ||||||||| ||||||| || || || | || || ||||||| Sbjct: 299 aacacaggaccaaggccctgcaggctctgctctcctgtcctacttcctccattcacaccg 358 Query: 184 acaagccggcgaaggacattctccaagtgcagagcacgttcccgctccccatcgatgacg 243 | || || || ||||||||||| |||||||| | || |||||||||||||||||| | Sbjct: 359 agaaacctgcaaaggacattcttcaagtgcaaaacatgttcccgctccccatcgacaatc 418 Query: 244 atcttc---ctggtgtttatctttgcggttaccattccgaagactcatatggagcaacat 300 |||||| |||||||||| || || || || ||||| |||| |||||||||||||| | Sbjct: 419 atcttctccctggtgtttacctctgtggctatcattctcaagattcatatggagcaactt 478 Query: 301 cttatcttataattcacccagaaggaaacataatggttgacagtccaaggtatacgccga 360 |||||||| ||| || ||||| ||||||||| | |||||||| ||||||||||| ||| Sbjct: 479 cttatcttttaacccatccagatggaaacatactagttgacagcccaaggtatacaacga 538 Query: 361 aacttgtggacaagatcgaaaaactcggtggagcgcgctacatgtttttgacccacattg 420 |||| | || || ||||||||||| |||||||| ||||||||||||||||||||||| | Sbjct: 539 aactggcagagaacatcgaaaaacttggtggagcacgctacatgtttttgacccacatgg 598 Query: 421 atgatgtagcggatcatcggaagtgggctgagcggctgaaatgcgagagaatcatccatt 480 ||||||| ||||||||| ||||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 599 atgatgtcgcggatcataggaagtgggctgagcggctaaaatgtgagaggatcatccatt 658 Query: 481 caggagatgtagtggacattactgctgatgtcgagcggaaacttactggaagtggtccct 540 | || ||||||| ||| ||||||| ||||| ||| ||||||||||||||| ||| || | Sbjct: 659 cgggcgatgtagaggatgttactgcagatgttgagtggaaacttactggaaatggcccat 718 Query: 541 ggaacattggaaatgattttgaacttatcca 571 || |||||||| |||||| ||||||||||| Sbjct: 719 gggacattggagctgatttcgaacttatcca 749
>ref|XM_507067.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1124_D06.11-2 mRNA Length = 1381 Score = 406 bits (205), Expect = e-110 Identities = 480/571 (84%), Gaps = 3/571 (0%) Strand = Plus / Plus Query: 4 ccggcgagttcttcgtcgatcaccggtgcatcgactgcgccacctgccggtggatggcgc 63 ||||||| ||||||||||||||||| |||||||| ||| |||||||| |||||||| Sbjct: 226 ccggcgacttcttcgtcgatcaccgatgcatcgattgccagacctgccgctggatggctt 285 Query: 64 cggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcccagctccgagg 123 ||||||||||||||||||||||||| | ||||||| || |||||||||| |||||| | Sbjct: 286 cggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcccatctccgacg 345 Query: 124 agcagaggaccaaggcactgcaggctttgctctcttgcccaacagcatcgatccacaccg 183 | || ||||||||||| ||||||||| ||||||| || || || | || || ||||||| Sbjct: 346 aacacaggaccaaggccctgcaggctctgctctcctgtcctacttcctccattcacaccg 405 Query: 184 acaagccggcgaaggacattctccaagtgcagagcacgttcccgctccccatcgatgacg 243 | || || || ||||||||||| |||||||| | || |||||||||||||||||| | Sbjct: 406 agaaacctgcaaaggacattcttcaagtgcaaaacatgttcccgctccccatcgacaatc 465 Query: 244 atcttc---ctggtgtttatctttgcggttaccattccgaagactcatatggagcaacat 300 |||||| |||||||||| || || || || ||||| |||| |||||||||||||| | Sbjct: 466 atcttctccctggtgtttacctctgtggctatcattctcaagattcatatggagcaactt 525 Query: 301 cttatcttataattcacccagaaggaaacataatggttgacagtccaaggtatacgccga 360 |||||||| ||| || ||||| ||||||||| | |||||||| ||||||||||| ||| Sbjct: 526 cttatcttttaacccatccagatggaaacatactagttgacagcccaaggtatacaacga 585 Query: 361 aacttgtggacaagatcgaaaaactcggtggagcgcgctacatgtttttgacccacattg 420 |||| | || || ||||||||||| |||||||| ||||||||||||||||||||||| | Sbjct: 586 aactggcagagaacatcgaaaaacttggtggagcacgctacatgtttttgacccacatgg 645 Query: 421 atgatgtagcggatcatcggaagtgggctgagcggctgaaatgcgagagaatcatccatt 480 ||||||| ||||||||| ||||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 646 atgatgtcgcggatcataggaagtgggctgagcggctaaaatgtgagaggatcatccatt 705 Query: 481 caggagatgtagtggacattactgctgatgtcgagcggaaacttactggaagtggtccct 540 | || ||||||| ||| ||||||| ||||| ||| ||||||||||||||| ||| || | Sbjct: 706 cgggcgatgtagaggatgttactgcagatgttgagtggaaacttactggaaatggcccat 765 Query: 541 ggaacattggaaatgattttgaacttatcca 571 || |||||||| |||||| ||||||||||| Sbjct: 766 gggacattggagctgatttcgaacttatcca 796
>dbj|AK122029.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112F11, full insert sequence Length = 1381 Score = 406 bits (205), Expect = e-110 Identities = 480/571 (84%), Gaps = 3/571 (0%) Strand = Plus / Plus Query: 4 ccggcgagttcttcgtcgatcaccggtgcatcgactgcgccacctgccggtggatggcgc 63 ||||||| ||||||||||||||||| |||||||| ||| |||||||| |||||||| Sbjct: 226 ccggcgacttcttcgtcgatcaccgatgcatcgattgccagacctgccgctggatggctt 285 Query: 64 cggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcccagctccgagg 123 ||||||||||||||||||||||||| | ||||||| || |||||||||| |||||| | Sbjct: 286 cggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcccatctccgacg 345 Query: 124 agcagaggaccaaggcactgcaggctttgctctcttgcccaacagcatcgatccacaccg 183 | || ||||||||||| ||||||||| ||||||| || || || | || || ||||||| Sbjct: 346 aacacaggaccaaggccctgcaggctctgctctcctgtcctacttcctccattcacaccg 405 Query: 184 acaagccggcgaaggacattctccaagtgcagagcacgttcccgctccccatcgatgacg 243 | || || || ||||||||||| |||||||| | || |||||||||||||||||| | Sbjct: 406 agaaacctgcaaaggacattcttcaagtgcaaaacatgttcccgctccccatcgacaatc 465 Query: 244 atcttc---ctggtgtttatctttgcggttaccattccgaagactcatatggagcaacat 300 |||||| |||||||||| || || || || ||||| |||| |||||||||||||| | Sbjct: 466 atcttctccctggtgtttacctctgtggctatcattctcaagattcatatggagcaactt 525 Query: 301 cttatcttataattcacccagaaggaaacataatggttgacagtccaaggtatacgccga 360 |||||||| ||| || ||||| ||||||||| | |||||||| ||||||||||| ||| Sbjct: 526 cttatcttttaacccatccagatggaaacatactagttgacagcccaaggtatacaacga 585 Query: 361 aacttgtggacaagatcgaaaaactcggtggagcgcgctacatgtttttgacccacattg 420 |||| | || || ||||||||||| |||||||| ||||||||||||||||||||||| | Sbjct: 586 aactggcagagaacatcgaaaaacttggtggagcacgctacatgtttttgacccacatgg 645 Query: 421 atgatgtagcggatcatcggaagtgggctgagcggctgaaatgcgagagaatcatccatt 480 ||||||| ||||||||| ||||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 646 atgatgtcgcggatcataggaagtgggctgagcggctaaaatgtgagaggatcatccatt 705 Query: 481 caggagatgtagtggacattactgctgatgtcgagcggaaacttactggaagtggtccct 540 | || ||||||| ||| ||||||| ||||| ||| ||||||||||||||| ||| || | Sbjct: 706 cgggcgatgtagaggatgttactgcagatgttgagtggaaacttactggaaatggcccat 765 Query: 541 ggaacattggaaatgattttgaacttatcca 571 || |||||||| |||||| ||||||||||| Sbjct: 766 gggacattggagctgatttcgaacttatcca 796
>dbj|AK104532.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-C07, full insert sequence Length = 1218 Score = 406 bits (205), Expect = e-110 Identities = 480/571 (84%), Gaps = 3/571 (0%) Strand = Plus / Plus Query: 4 ccggcgagttcttcgtcgatcaccggtgcatcgactgcgccacctgccggtggatggcgc 63 ||||||| ||||||||||||||||| |||||||| ||| |||||||| |||||||| Sbjct: 180 ccggcgacttcttcgtcgatcaccgatgcatcgattgccagacctgccgctggatggctt 239 Query: 64 cggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcccagctccgagg 123 ||||||||||||||||||||||||| | ||||||| || |||||||||| |||||| | Sbjct: 240 cggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcccatctccgacg 299 Query: 124 agcagaggaccaaggcactgcaggctttgctctcttgcccaacagcatcgatccacaccg 183 | || ||||||||||| ||||||||| ||||||| || || || | || || ||||||| Sbjct: 300 aacacaggaccaaggccctgcaggctctgctctcctgtcctacttcctccattcacaccg 359 Query: 184 acaagccggcgaaggacattctccaagtgcagagcacgttcccgctccccatcgatgacg 243 | || || || ||||||||||| |||||||| | || |||||||||||||||||| | Sbjct: 360 agaaacctgcaaaggacattcttcaagtgcaaaacatgttcccgctccccatcgacaatc 419 Query: 244 atcttc---ctggtgtttatctttgcggttaccattccgaagactcatatggagcaacat 300 |||||| |||||||||| || || || || ||||| |||| |||||||||||||| | Sbjct: 420 atcttctccctggtgtttacctctgtggctatcattctcaagattcatatggagcaactt 479 Query: 301 cttatcttataattcacccagaaggaaacataatggttgacagtccaaggtatacgccga 360 |||||||| ||| || ||||| ||||||||| | |||||||| ||||||||||| ||| Sbjct: 480 cttatcttttaacccatccagatggaaacatactagttgacagcccaaggtatacaacga 539 Query: 361 aacttgtggacaagatcgaaaaactcggtggagcgcgctacatgtttttgacccacattg 420 |||| | || || ||||||||||| |||||||| ||||||||||||||||||||||| | Sbjct: 540 aactggcagagaacatcgaaaaacttggtggagcacgctacatgtttttgacccacatgg 599 Query: 421 atgatgtagcggatcatcggaagtgggctgagcggctgaaatgcgagagaatcatccatt 480 ||||||| ||||||||| ||||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 600 atgatgtcgcggatcataggaagtgggctgagcggctaaaatgtgagaggatcatccatt 659 Query: 481 caggagatgtagtggacattactgctgatgtcgagcggaaacttactggaagtggtccct 540 | || ||||||| ||| ||||||| ||||| ||| ||||||||||||||| ||| || | Sbjct: 660 cgggcgatgtagaggatgttactgcagatgttgagtggaaacttactggaaatggcccat 719 Query: 541 ggaacattggaaatgattttgaacttatcca 571 || |||||||| |||||| ||||||||||| Sbjct: 720 gggacattggagctgatttcgaacttatcca 750
>dbj|AK104364.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-C11, full insert sequence Length = 1218 Score = 406 bits (205), Expect = e-110 Identities = 480/571 (84%), Gaps = 3/571 (0%) Strand = Plus / Plus Query: 4 ccggcgagttcttcgtcgatcaccggtgcatcgactgcgccacctgccggtggatggcgc 63 ||||||| ||||||||||||||||| |||||||| ||| |||||||| |||||||| Sbjct: 180 ccggcgacttcttcgtcgatcaccgatgcatcgattgccagacctgccgctggatggctt 239 Query: 64 cggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcccagctccgagg 123 ||||||||||||||||||||||||| | ||||||| || |||||||||| |||||| | Sbjct: 240 cggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcccatctccgacg 299 Query: 124 agcagaggaccaaggcactgcaggctttgctctcttgcccaacagcatcgatccacaccg 183 | || ||||||||||| ||||||||| ||||||| || || || | || || ||||||| Sbjct: 300 aacacaggaccaaggccctgcaggctctgctctcctgtcctacttcctccattcacaccg 359 Query: 184 acaagccggcgaaggacattctccaagtgcagagcacgttcccgctccccatcgatgacg 243 | || || || ||||||||||| |||||||| | || |||||||||||||||||| | Sbjct: 360 agaaacctgcaaaggacattcttcaagtgcaaaacatgttcccgctccccatcgacaatc 419 Query: 244 atcttc---ctggtgtttatctttgcggttaccattccgaagactcatatggagcaacat 300 |||||| |||||||||| || || || || ||||| |||| |||||||||||||| | Sbjct: 420 atcttctccctggtgtttacctctgtggctatcattctcaagattcatatggagcaactt 479 Query: 301 cttatcttataattcacccagaaggaaacataatggttgacagtccaaggtatacgccga 360 |||||||| ||| || ||||| ||||||||| | |||||||| ||||||||||| ||| Sbjct: 480 cttatcttttaacccatccagatggaaacatactagttgacagcccaaggtatacaacga 539 Query: 361 aacttgtggacaagatcgaaaaactcggtggagcgcgctacatgtttttgacccacattg 420 |||| | || || ||||||||||| |||||||| ||||||||||||||||||||||| | Sbjct: 540 aactggcagagaacatcgaaaaacttggtggagcacgctacatgtttttgacccacatgg 599 Query: 421 atgatgtagcggatcatcggaagtgggctgagcggctgaaatgcgagagaatcatccatt 480 ||||||| ||||||||| ||||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 600 atgatgtcgcggatcataggaagtgggctgagcggctaaaatgtgagaggatcatccatt 659 Query: 481 caggagatgtagtggacattactgctgatgtcgagcggaaacttactggaagtggtccct 540 | || ||||||| ||| ||||||| ||||| ||| ||||||||||||||| ||| || | Sbjct: 660 cgggcgatgtagaggatgttactgcagatgttgagtggaaacttactggaaatggcccat 719 Query: 541 ggaacattggaaatgattttgaacttatcca 571 || |||||||| |||||| ||||||||||| Sbjct: 720 gggacattggagctgatttcgaacttatcca 750
>dbj|AK064830.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F10, full insert sequence Length = 1335 Score = 406 bits (205), Expect = e-110 Identities = 480/571 (84%), Gaps = 3/571 (0%) Strand = Plus / Plus Query: 4 ccggcgagttcttcgtcgatcaccggtgcatcgactgcgccacctgccggtggatggcgc 63 ||||||| ||||||||||||||||| |||||||| ||| |||||||| |||||||| Sbjct: 179 ccggcgacttcttcgtcgatcaccgatgcatcgattgccagacctgccgctggatggctt 238 Query: 64 cggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcccagctccgagg 123 ||||||||||||||||||||||||| | ||||||| || |||||||||| |||||| | Sbjct: 239 cggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcccatctccgacg 298 Query: 124 agcagaggaccaaggcactgcaggctttgctctcttgcccaacagcatcgatccacaccg 183 | || ||||||||||| ||||||||| ||||||| || || || | || || ||||||| Sbjct: 299 aacacaggaccaaggccctgcaggctctgctctcctgtcctacttcctccattcacaccg 358 Query: 184 acaagccggcgaaggacattctccaagtgcagagcacgttcccgctccccatcgatgacg 243 | || || || ||||||||||| |||||||| | || |||||||||||||||||| | Sbjct: 359 agaaacctgcaaaggacattcttcaagtgcaaaacatgttcccgctccccatcgacaatc 418 Query: 244 atcttc---ctggtgtttatctttgcggttaccattccgaagactcatatggagcaacat 300 |||||| |||||||||| || || || || ||||| |||| |||||||||||||| | Sbjct: 419 atcttctccctggtgtttacctctgtggctatcattctcaagattcatatggagcaactt 478 Query: 301 cttatcttataattcacccagaaggaaacataatggttgacagtccaaggtatacgccga 360 |||||||| ||| || ||||| ||||||||| | |||||||| ||||||||||| ||| Sbjct: 479 cttatcttttaacccatccagatggaaacatactagttgacagcccaaggtatacaacga 538 Query: 361 aacttgtggacaagatcgaaaaactcggtggagcgcgctacatgtttttgacccacattg 420 |||| | || || ||||||||||| |||||||| ||||||||||||||||||||||| | Sbjct: 539 aactggcagagaacatcgaaaaacttggtggagcacgctacatgtttttgacccacatgg 598 Query: 421 atgatgtagcggatcatcggaagtgggctgagcggctgaaatgcgagagaatcatccatt 480 ||||||| ||||||||| ||||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 599 atgatgtcgcggatcataggaagtgggctgagcggctaaaatgtgagaggatcatccatt 658 Query: 481 caggagatgtagtggacattactgctgatgtcgagcggaaacttactggaagtggtccct 540 | || ||||||| ||| ||||||| ||||| ||| ||||||||||||||| ||| || | Sbjct: 659 cgggcgatgtagaggatgttactgcagatgttgagtggaaacttactggaaatggcccat 718 Query: 541 ggaacattggaaatgattttgaacttatcca 571 || |||||||| |||||| ||||||||||| Sbjct: 719 gggacattggagctgatttcgaacttatcca 749
>dbj|AK065885.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045A06, full insert sequence Length = 3391 Score = 375 bits (189), Expect = e-100 Identities = 476/571 (83%), Gaps = 3/571 (0%) Strand = Plus / Plus Query: 4 ccggcgagttcttcgtcgatcaccggtgcatcgactgcgccacctgccggtggatggcgc 63 ||||||| ||||||||||||||||| |||||||||||| |||||||| |||||||||| Sbjct: 2287 ccggcgacttcttcgtcgatcaccgatgcatcgactgccagacctgccgctggatggcgc 2346 Query: 64 cggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcccagctccgagg 123 ||||||||||||||||||||||||| | |||||||||| ||||| |||| |||||| | Sbjct: 2347 cggaggtgttcaagagggtggacggaaaagccgccgtggccgcgcatcccatctccgacg 2406 Query: 124 agcagaggaccaaggcactgcaggctttgctctcttgcccaacagcatcgatccacaccg 183 | || ||||||||||| ||||||||| ||||||| || || || || || || ||||||| Sbjct: 2407 accacaggaccaaggccctgcaggctctgctctcctgtcctactgcctccattcacaccg 2466 Query: 184 acaagccggcgaaggacattctccaagtgcagagcacgttcccgctccccatcgatgacg 243 | || || || || |||||||| |||||||| | || |||||| ||||||||||| Sbjct: 2467 agaaacctgcaaaagacattcttcaagtgcaaaacatgttccccctccccatcgacactc 2526 Query: 244 atcttc---ctggtgtttatctttgcggttaccattccgaagactcatatggagcaacat 300 |||||| |||||||||||| ||| ||||| ||||| |||||||| | ||||||||| | Sbjct: 2527 atcttctccctggtgtttatcattgtggttatcattctgaagactcgtttggagcaactt 2586 Query: 301 cttatcttataattcacccagaaggaaacataatggttgacagtccaaggtatacgccga 360 |||||||||||| || ||||| ||||||||| | || ||||| ||||||||||| ||| Sbjct: 2587 cttatcttataacccatccagatggaaacatactagtcgacagcccaaggtatacaacga 2646 Query: 361 aacttgtggacaagatcgaaaaactcggtggagcgcgctacatgtttttgacccacattg 420 |||| | | || |||||| |||| |||||||| |||||||||||||||||||||| | Sbjct: 2647 aactggcaaataacatcgaagaacttggtggagcacgctacatgtttttgacccacaggg 2706 Query: 421 atgatgtagcggatcatcggaagtgggctgagcggctgaaatgcgagagaatcatccatt 480 |||||||||| |||||| ||||||||||||||||||| ||||| ||||| || ||||||| Sbjct: 2707 atgatgtagcagatcataggaagtgggctgagcggctaaaatgtgagaggattatccatt 2766 Query: 481 caggagatgtagtggacattactgctgatgtcgagcggaaacttactggaagtggtccct 540 | || ||||||| | ||| | ||||| ||||||||||||||||| | |||||| | Sbjct: 2767 cgggcgatgtagagcgtgctaccgtagatgttgagcggaaacttactggcaatggtcctt 2826 Query: 541 ggaacattggaaatgattttgaacttatcca 571 ||||||||||| |||||| ||||||||||| Sbjct: 2827 ggaacattggagctgatttcgaacttatcca 2857
>ref|XM_468526.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1144 Score = 289 bits (146), Expect = 5e-75 Identities = 322/380 (84%), Gaps = 3/380 (0%) Strand = Plus / Plus Query: 195 aaggacattctccaagtgcagagcacgttcccgctccccatcgatgacgatcttc---ct 251 ||||||||||| |||||||| | || |||||||||||||||||| | |||||| || Sbjct: 299 aaggacattcttcaagtgcaaaacatgttcccgctccccatcgacaatcatcttctccct 358 Query: 252 ggtgtttatctttgcggttaccattccgaagactcatatggagcaacatcttatcttata 311 |||||||| || || || || ||||| |||| |||||||||||||| ||||||||| || Sbjct: 359 ggtgtttacctctgtggctatcattctcaagattcatatggagcaacttcttatctttta 418 Query: 312 attcacccagaaggaaacataatggttgacagtccaaggtatacgccgaaacttgtggac 371 | || ||||| ||||||||| | |||||||| ||||||||||| ||||||| | || Sbjct: 419 acccatccagatggaaacatactagttgacagcccaaggtatacaacgaaactggcagag 478 Query: 372 aagatcgaaaaactcggtggagcgcgctacatgtttttgacccacattgatgatgtagcg 431 || ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||| Sbjct: 479 aacatcgaaaaacttggtggagcacgctacatgtttttgacccacatggatgatgtcgcg 538 Query: 432 gatcatcggaagtgggctgagcggctgaaatgcgagagaatcatccattcaggagatgta 491 |||||| ||||||||||||||||||| ||||| ||||| ||||||||||| || |||||| Sbjct: 539 gatcataggaagtgggctgagcggctaaaatgtgagaggatcatccattcgggcgatgta 598 Query: 492 gtggacattactgctgatgtcgagcggaaacttactggaagtggtccctggaacattgga 551 | ||| ||||||| ||||| ||| ||||||||||||||| ||| || ||| |||||||| Sbjct: 599 gaggatgttactgcagatgttgagtggaaacttactggaaatggcccatgggacattgga 658 Query: 552 aatgattttgaacttatcca 571 |||||| ||||||||||| Sbjct: 659 gctgatttcgaacttatcca 678 Score = 107 bits (54), Expect = 4e-20 Identities = 102/118 (86%) Strand = Plus / Plus Query: 4 ccggcgagttcttcgtcgatcaccggtgcatcgactgcgccacctgccggtggatggcgc 63 ||||||| ||||||||||||||||| |||||||| ||| |||||||| |||||||| Sbjct: 175 ccggcgacttcttcgtcgatcaccgatgcatcgattgccagacctgccgctggatggctt 234 Query: 64 cggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcccagctccga 121 ||||||||||||||||||||||||| | ||||||| || |||||||||| |||||| Sbjct: 235 cggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcccatctccga 292
>dbj|AK065244.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002I14, full insert sequence Length = 1142 Score = 281 bits (142), Expect = 1e-72 Identities = 321/380 (84%), Gaps = 3/380 (0%) Strand = Plus / Plus Query: 195 aaggacattctccaagtgcagagcacgttcccgctccccatcgatgacgatcttc---ct 251 ||||||||||| |||||||| | || |||||||||||||||||| | |||||| || Sbjct: 297 aaggacattcttcaagtgcaaaacatgttcccgctccccatcgacaatcatcttctccct 356 Query: 252 ggtgtttatctttgcggttaccattccgaagactcatatggagcaacatcttatcttata 311 |||||||| || || || || ||||| |||| |||||||||||||| ||||||||| || Sbjct: 357 ggtgtttacctctgtggctatcattctcaagattcatatggagcaacttcttatctttta 416 Query: 312 attcacccagaaggaaacataatggttgacagtccaaggtatacgccgaaacttgtggac 371 | || ||||| ||||||||| | |||||||| ||||||||||| ||||||| | || Sbjct: 417 acccatccagatggaaacatactagttgacagcccaaggtatacaacgaaactggcagag 476 Query: 372 aagatcgaaaaactcggtggagcgcgctacatgtttttgacccacattgatgatgtagcg 431 || ||||||||||| ||| |||| ||||||||||||||||||||||| |||||||| ||| Sbjct: 477 aacatcgaaaaacttggttgagcacgctacatgtttttgacccacatggatgatgtcgcg 536 Query: 432 gatcatcggaagtgggctgagcggctgaaatgcgagagaatcatccattcaggagatgta 491 |||||| ||||||||||||||||||| ||||| ||||| ||||||||||| || |||||| Sbjct: 537 gatcataggaagtgggctgagcggctaaaatgtgagaggatcatccattcgggcgatgta 596 Query: 492 gtggacattactgctgatgtcgagcggaaacttactggaagtggtccctggaacattgga 551 | ||| ||||||| ||||| ||| ||||||||||||||| ||| || ||| |||||||| Sbjct: 597 gaggatgttactgcagatgttgagtggaaacttactggaaatggcccatgggacattgga 656 Query: 552 aatgattttgaacttatcca 571 |||||| ||||||||||| Sbjct: 657 gctgatttcgaacttatcca 676 Score = 107 bits (54), Expect = 4e-20 Identities = 102/118 (86%) Strand = Plus / Plus Query: 4 ccggcgagttcttcgtcgatcaccggtgcatcgactgcgccacctgccggtggatggcgc 63 ||||||| ||||||||||||||||| |||||||| ||| |||||||| |||||||| Sbjct: 173 ccggcgacttcttcgtcgatcaccgatgcatcgattgccagacctgccgctggatggctt 232 Query: 64 cggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcccagctccga 121 ||||||||||||||||||||||||| | ||||||| || |||||||||| |||||| Sbjct: 233 cggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcccatctccga 290
>gb|AY112293.1| Zea mays CL19799_1 mRNA sequence Length = 644 Score = 113 bits (57), Expect = 6e-22 Identities = 151/184 (82%) Strand = Plus / Minus Query: 388 gtggagcgcgctacatgtttttgacccacattgatgatgtagcggatcatcggaagtggg 447 ||||||||||||||||| ||||||||||||||| ||||| ||||| ||||||||| Sbjct: 644 gtggagcgcgctacatgnnnnngacccacattgatgacgtagcagatcacaggaagtggg 585 Query: 448 ctgagcggctgaaatgcgagagaatcatccattcaggagatgtagtggacattactgctg 507 |||||| ||| ||||| || ||||| || |||||||||||||| | ||| ||| || | Sbjct: 584 ctgagcagctaaaatgtgaaagaataatacattcaggagatgtggaggaggctaccgcag 525 Query: 508 atgtcgagcggaaacttactggaagtggtccctggaacattggaaatgattttgaactta 567 |||| ||| |||||||| |||| |||||| |||||| | |||| ||||||||||||| Sbjct: 524 atgttgagtggaaacttgaaggaaatggtccatggaacttaggaacagattttgaactta 465 Query: 568 tcca 571 |||| Sbjct: 464 tcca 461
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 420 gatgatgtagcggatcatcggaagtgggctgagcggctgaaatgcgagagaatcatccat 479 |||||||| ||||||||| ||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 35680735 gatgatgtcgcggatcataggaagtgggctgagcggctaaaatgtgagaggatcatccat 35680676 Query: 480 tcaggagatgta 491 || || |||||| Sbjct: 35680675 tcgggcgatgta 35680664 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Minus Query: 420 gatgatgtagcggatcatcggaagtgggctgagcggctgaaatgcgagagaatcatccat 479 ||||||||||| |||||| ||||||||||||||||||| ||||| ||||| || |||||| Sbjct: 35684755 gatgatgtagcagatcataggaagtgggctgagcggctaaaatgtgagaggattatccat 35684696 Query: 480 tcaggagatgta 491 || || |||||| Sbjct: 35684695 tcgggcgatgta 35684684 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 65 ggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcccagctccgagga 124 |||||||||||||||||||||||| | |||||||||| ||||| |||| |||||| || Sbjct: 35685641 ggaggtgttcaagagggtggacggaaaagccgccgtggccgcgcatcccatctccgacga 35685582 Query: 125 gcagaggaccaaggcactgcagg 147 || ||||||||||| ||||||| Sbjct: 35685581 ccacaggaccaaggccctgcagg 35685559 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 65 ggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcccagctccgagga 124 |||||||||||||||||||||||| | ||||||| || |||||||||| |||||| || Sbjct: 35681623 ggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcccatctccgacga 35681564 Query: 125 gcagaggaccaaggcactgcagg 147 || ||||||||||| ||||||| Sbjct: 35681563 acacaggaccaaggccctgcagg 35681541 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 340 acagtccaaggtatacgccgaaacttgtggacaagatcgaaaaactcggtggagcgcgct 399 |||| ||||||||||| ||||||| | || || ||||||||||| |||||||| |||| Sbjct: 35680925 acagcccaaggtatacaacgaaactggcagagaacatcgaaaaacttggtggagcacgct 35680866 Query: 400 acatgtttttgacccacat 418 ||||||||||||||||||| Sbjct: 35680865 acatgtttttgacccacat 35680847 Score = 73.8 bits (37), Expect = 6e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 252 ggtgtttatctttgcggttaccattccgaagactcatatggagcaacatcttatcttata 311 |||||||||| ||| ||||| ||||| |||||||| | ||||||||| |||||||||||| Sbjct: 35685279 ggtgtttatcattgtggttatcattctgaagactcgtttggagcaacttcttatcttata 35685220 Query: 312 attcacccagaaggaaacata 332 | || ||||| ||||||||| Sbjct: 35685219 acccatccagatggaaacata 35685199 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 507 gatgtcgagcggaaacttactggaagtggtccctggaacattggaaatgattttgaactt 566 ||||| ||||||||||||||||| | |||||| |||||||||||| |||||| |||||| Sbjct: 35684468 gatgttgagcggaaacttactggcaatggtccttggaacattggagctgatttcgaactt 35684409 Query: 567 atcca 571 ||||| Sbjct: 35684408 atcca 35684404 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 499 ttactgctgatgtcgagcggaaacttactggaagtggtccctggaacattggaaatgatt 558 ||||||| ||||| ||| ||||||||||||||| ||| || ||| |||||||| ||||| Sbjct: 35680362 ttactgcagatgttgagtggaaacttactggaaatggcccatgggacattggagctgatt 35680303 Query: 559 ttgaacttatcca 571 | ||||||||||| Sbjct: 35680302 tcgaacttatcca 35680290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 375 atcgaaaaactcggtggagcgcgctacatgtttttgacccaca 417 |||||| |||| |||||||| |||||||||||||||||||||| Sbjct: 35684921 atcgaagaacttggtggagcacgctacatgtttttgacccaca 35684879 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 177 cacaccgacaagccggcgaaggacattctccaagtgcagagcacgttcccgctccccatc 236 |||||||| || || || ||||||||||| |||||||| | || |||||||||||||||| Sbjct: 35681445 cacaccgagaaacctgcaaaggacattcttcaagtgcaaaacatgttcccgctccccatc 35681386 Query: 237 ga 238 || Sbjct: 35681385 ga 35681384 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 280 aagactcatatggagcaacatcttatcttataattcacccagaaggaaacataatggttg 339 |||| |||||||||||||| ||||||||| ||| || ||||| ||||||||| | |||| Sbjct: 35681245 aagattcatatggagcaacttcttatcttttaacccatccagatggaaacatactagttg 35681186 Query: 340 acag 343 |||| Sbjct: 35681185 acag 35681182 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 21 gatcaccggtgcatcgactgcgccacctgccggtggatggcgccgg 66 |||||||| |||||||||||| |||||||| ||||||||||||| Sbjct: 35685772 gatcaccgatgcatcgactgccagacctgccgctggatggcgccgg 35685727 Score = 46.1 bits (23), Expect = 0.13 Identities = 77/95 (81%) Strand = Plus / Minus Query: 144 caggctttgctctcttgcccaacagcatcgatccacaccgacaagccggcgaaggacatt 203 |||||| ||||||| || || || || || || |||||||| || || || || |||||| Sbjct: 35685496 caggctctgctctcctgtcctactgcctccattcacaccgagaaacctgcaaaagacatt 35685437 Query: 204 ctccaagtgcagagcacgttcccgctccccatcga 238 || |||||||| | || |||||| ||||||||||| Sbjct: 35685436 cttcaagtgcaaaacatgttccccctccccatcga 35685402 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 tcttcctggtgtttatcttt 264 |||||||||||||||||||| Sbjct: 25973291 tcttcctggtgtttatcttt 25973272 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 cataatggttgacagtccaa 348 |||||||||||||||||||| Sbjct: 15946813 cataatggttgacagtccaa 15946832
>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_D06 Length = 102239 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 420 gatgatgtagcggatcatcggaagtgggctgagcggctgaaatgcgagagaatcatccat 479 |||||||| ||||||||| ||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 41349 gatgatgtcgcggatcataggaagtgggctgagcggctaaaatgtgagaggatcatccat 41290 Query: 480 tcaggagatgta 491 || || |||||| Sbjct: 41289 tcgggcgatgta 41278 Score = 79.8 bits (40), Expect = 9e-12 Identities = 64/72 (88%) Strand = Plus / Minus Query: 420 gatgatgtagcggatcatcggaagtgggctgagcggctgaaatgcgagagaatcatccat 479 ||||||||||| |||||| ||||||||||||||||||| ||||| ||||| || |||||| Sbjct: 45369 gatgatgtagcagatcataggaagtgggctgagcggctaaaatgtgagaggattatccat 45310 Query: 480 tcaggagatgta 491 || || |||||| Sbjct: 45309 tcgggcgatgta 45298 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 65 ggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcccagctccgagga 124 |||||||||||||||||||||||| | |||||||||| ||||| |||| |||||| || Sbjct: 46255 ggaggtgttcaagagggtggacggaaaagccgccgtggccgcgcatcccatctccgacga 46196 Query: 125 gcagaggaccaaggcactgcagg 147 || ||||||||||| ||||||| Sbjct: 46195 ccacaggaccaaggccctgcagg 46173 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 65 ggaggtgttcaagagggtggacggcatgtccgccgtggcggcgcagcccagctccgagga 124 |||||||||||||||||||||||| | ||||||| || |||||||||| |||||| || Sbjct: 42237 ggaggtgttcaagagggtggacggaaaagccgccgtcgccgcgcagcccatctccgacga 42178 Query: 125 gcagaggaccaaggcactgcagg 147 || ||||||||||| ||||||| Sbjct: 42177 acacaggaccaaggccctgcagg 42155 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 340 acagtccaaggtatacgccgaaacttgtggacaagatcgaaaaactcggtggagcgcgct 399 |||| ||||||||||| ||||||| | || || ||||||||||| |||||||| |||| Sbjct: 41539 acagcccaaggtatacaacgaaactggcagagaacatcgaaaaacttggtggagcacgct 41480 Query: 400 acatgtttttgacccacat 418 ||||||||||||||||||| Sbjct: 41479 acatgtttttgacccacat 41461 Score = 73.8 bits (37), Expect = 6e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 252 ggtgtttatctttgcggttaccattccgaagactcatatggagcaacatcttatcttata 311 |||||||||| ||| ||||| ||||| |||||||| | ||||||||| |||||||||||| Sbjct: 45893 ggtgtttatcattgtggttatcattctgaagactcgtttggagcaacttcttatcttata 45834 Query: 312 attcacccagaaggaaacata 332 | || ||||| ||||||||| Sbjct: 45833 acccatccagatggaaacata 45813 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 507 gatgtcgagcggaaacttactggaagtggtccctggaacattggaaatgattttgaactt 566 ||||| ||||||||||||||||| | |||||| |||||||||||| |||||| |||||| Sbjct: 45082 gatgttgagcggaaacttactggcaatggtccttggaacattggagctgatttcgaactt 45023 Query: 567 atcca 571 ||||| Sbjct: 45022 atcca 45018 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 499 ttactgctgatgtcgagcggaaacttactggaagtggtccctggaacattggaaatgatt 558 ||||||| ||||| ||| ||||||||||||||| ||| || ||| |||||||| ||||| Sbjct: 40976 ttactgcagatgttgagtggaaacttactggaaatggcccatgggacattggagctgatt 40917 Query: 559 ttgaacttatcca 571 | ||||||||||| Sbjct: 40916 tcgaacttatcca 40904 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 375 atcgaaaaactcggtggagcgcgctacatgtttttgacccaca 417 |||||| |||| |||||||| |||||||||||||||||||||| Sbjct: 45535 atcgaagaacttggtggagcacgctacatgtttttgacccaca 45493 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 177 cacaccgacaagccggcgaaggacattctccaagtgcagagcacgttcccgctccccatc 236 |||||||| || || || ||||||||||| |||||||| | || |||||||||||||||| Sbjct: 42059 cacaccgagaaacctgcaaaggacattcttcaagtgcaaaacatgttcccgctccccatc 42000 Query: 237 ga 238 || Sbjct: 41999 ga 41998 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 280 aagactcatatggagcaacatcttatcttataattcacccagaaggaaacataatggttg 339 |||| |||||||||||||| ||||||||| ||| || ||||| ||||||||| | |||| Sbjct: 41859 aagattcatatggagcaacttcttatcttttaacccatccagatggaaacatactagttg 41800 Query: 340 acag 343 |||| Sbjct: 41799 acag 41796 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 21 gatcaccggtgcatcgactgcgccacctgccggtggatggcgccgg 66 |||||||| |||||||||||| |||||||| ||||||||||||| Sbjct: 46386 gatcaccgatgcatcgactgccagacctgccgctggatggcgccgg 46341 Score = 46.1 bits (23), Expect = 0.13 Identities = 77/95 (81%) Strand = Plus / Minus Query: 144 caggctttgctctcttgcccaacagcatcgatccacaccgacaagccggcgaaggacatt 203 |||||| ||||||| || || || || || || |||||||| || || || || |||||| Sbjct: 46110 caggctctgctctcctgtcctactgcctccattcacaccgagaaacctgcaaaagacatt 46051 Query: 204 ctccaagtgcagagcacgttcccgctccccatcga 238 || |||||||| | || |||||| ||||||||||| Sbjct: 46050 cttcaagtgcaaaacatgttccccctccccatcga 46016
>dbj|AB158483.1| Cyanidioschyzon merolae genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, complete sequence, clone:BAC clone H1D17 Length = 98410 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 30 tgcatcgactgcgccacctgccggtggatggcgccg 65 ||||||||||| | ||||||||||||||||||||| Sbjct: 51397 tgcatcgactgtgatacctgccggtggatggcgccg 51432
>ref|NM_119509.3| Arabidopsis thaliana catalytic AT4G33540 mRNA, complete cds Length = 1359 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 396 cgctacatgtttttgacccacattgatgatgtagcggatca 436 ||||||||||||||||| |||| |||||||| || ||||| Sbjct: 592 cgctacatgtttttgacacacagggatgatgttgcagatca 632
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 caccggtgcatcgactgcgcc 44 ||||||||||||||||||||| Sbjct: 2858584 caccggtgcatcgactgcgcc 2858564
>gb|AY093148.1| Arabidopsis thaliana putative protein (At4g33540) mRNA, complete cds Length = 1265 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 396 cgctacatgtttttgacccacattgatgatgtagcggatca 436 ||||||||||||||||| |||| |||||||| || ||||| Sbjct: 592 cgctacatgtttttgacacacagggatgatgttgcagatca 632
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ttcttcgtcgatcaccggtgc 32 ||||||||||||||||||||| Sbjct: 1961780 ttcttcgtcgatcaccggtgc 1961760
>emb|BX826490.1|CNS0A3A3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB30ZC02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1243 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 396 cgctacatgtttttgacccacattgatgatgtagcggatca 436 ||||||||||||||||| |||| |||||||| || ||||| Sbjct: 612 cgctacatgtttttgacacacagggatgatgttgcagatca 652
>emb|BX827868.1|CNS0A31H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH29ZE12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1624 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 396 cgctacatgtttttgacccacattgatgatgtagcggatca 436 ||||||||||||||||| |||| |||||||| || ||||| Sbjct: 1013 cgctacatgtttttgacacacagggatgatgttgcagatca 1053
>emb|BX827444.1|CNS0A2SJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS55ZD11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1272 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 396 cgctacatgtttttgacccacattgatgatgtagcggatca 436 ||||||||||||||||| |||| |||||||| || ||||| Sbjct: 624 cgctacatgtttttgacacacagggatgatgttgcagatca 664
>gb|AC084567.1|CBRG36N05 Caenorhabditis briggsae cosmid G36N05, complete sequence Length = 23868 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 461 atgcgagagaatcatccattc 481 ||||||||||||||||||||| Sbjct: 5092 atgcgagagaatcatccattc 5112
>gb|BT003391.1| Arabidopsis thaliana putative protein (At4g33540) mRNA, complete cds Length = 1141 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 396 cgctacatgtttttgacccacattgatgatgtagcggatca 436 ||||||||||||||||| |||| |||||||| || ||||| Sbjct: 583 cgctacatgtttttgacacacagggatgatgttgcagatca 623
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 cgagttcttcgtcgatcaccg 28 ||||||||||||||||||||| Sbjct: 1344533 cgagttcttcgtcgatcaccg 1344513
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 caccggtgcatcgactgcgcc 44 ||||||||||||||||||||| Sbjct: 2880439 caccggtgcatcgactgcgcc 2880419
>gb|AC170189.2| Mus musculus BAC clone RP23-103L12 from chromosome 3, complete sequence Length = 204731 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 549 ggaaatgattttgaacttat 568 |||||||||||||||||||| Sbjct: 18918 ggaaatgattttgaacttat 18937
>ref|XM_864359.1| PREDICTED: Bos taurus similar to Delta-like protein 1 precursor (Drosophila Delta homolog 1) (Delta1) (H-Delta-1), transcript variant 2 (LOC506694), mRNA Length = 2328 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ccgtggcggcgcagcccagc 116 |||||||||||||||||||| Sbjct: 1718 ccgtggcggcgcagcccagc 1699
>ref|XM_583176.2| PREDICTED: Bos taurus similar to Delta-like protein 1 precursor (Drosophila Delta homolog 1) (Delta1) (H-Delta-1), transcript variant 1 (LOC506694), mRNA Length = 2289 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ccgtggcggcgcagcccagc 116 |||||||||||||||||||| Sbjct: 1679 ccgtggcggcgcagcccagc 1660
>ref|XM_872751.1| PREDICTED: Bos taurus similar to Delta-like protein 1 precursor (Drosophila Delta homolog 1) (Delta1) (H-Delta-1), transcript variant 3 (LOC506694), mRNA Length = 2421 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ccgtggcggcgcagcccagc 116 |||||||||||||||||||| Sbjct: 1811 ccgtggcggcgcagcccagc 1792
>ref|NM_008745.2| Mus musculus neurotrophic tyrosine kinase, receptor, type 2 (Ntrk2), transcript variant 2, mRNA Length = 7022 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 acattctccaagtgcagagc 218 |||||||||||||||||||| Sbjct: 5129 acattctccaagtgcagagc 5148
>gb|AC129188.3| Mus musculus BAC clone RP23-446G23 from chromosome 19, complete sequence Length = 175245 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 caggctttgctctcttgccc 163 |||||||||||||||||||| Sbjct: 78709 caggctttgctctcttgccc 78690
>emb|AL023828.1|CEY17G7B Caenorhabditis elegans YAC Y17G7B, complete sequence Length = 143092 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 376 tcgaaaaactcggtggagcgcgct 399 |||||||| ||||||||||||||| Sbjct: 3984 tcgaaaaattcggtggagcgcgct 4007
>emb|AM051357.1| Gasterosteus aculeatus mRNA for beclin 1 (atg6 gene) Length = 1596 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 ctccgaggagcagaggaccaaggc 139 ||||||||||||| |||||||||| Sbjct: 1248 ctccgaggagcagtggaccaaggc 1271
>gb|AC122934.2| Mus musculus BAC clone RP23-19A13 from 3, complete sequence Length = 189627 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 549 ggaaatgattttgaacttat 568 |||||||||||||||||||| Sbjct: 126390 ggaaatgattttgaacttat 126409
>gb|AC122734.6| Mus musculus chromosome 10, clone RP24-108E17, complete sequence Length = 178230 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 ggagcaacatcttatcttataatt 314 |||||||||| ||||||||||||| Sbjct: 20432 ggagcaacatattatcttataatt 20409
>emb|CR749745.16| Zebrafish DNA sequence from clone DKEY-7O20 in linkage group 5, complete sequence Length = 110199 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 gaaacataatggttgacagt 344 |||||||||||||||||||| Sbjct: 97416 gaaacataatggttgacagt 97435
>emb|BX324210.12| Zebrafish DNA sequence from clone DKEY-20I20 in linkage group 22, complete sequence Length = 230738 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 477 cattcaggagatgtagtggacatt 500 |||||||||||||| ||||||||| Sbjct: 16215 cattcaggagatgttgtggacatt 16192
>ref|NM_142952.2| Drosophila melanogaster Autophagy-specific gene 6 CG5429-RA (Atg6), mRNA Length = 1733 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 gaggagcagaggaccaaggcactg 143 ||||||||| |||||||||||||| Sbjct: 1556 gaggagcagtggaccaaggcactg 1579
>dbj|AK147441.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1042H21 product:neurotrophic tyrosine kinase, receptor, type 2, full insert sequence Length = 6846 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 acattctccaagtgcagagc 218 |||||||||||||||||||| Sbjct: 4977 acattctccaagtgcagagc 4996
>gb|AC093863.3| Homo sapiens BAC clone RP11-552I10 from 4, complete sequence Length = 164278 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cactgcaggctttgctctct 158 |||||||||||||||||||| Sbjct: 5082 cactgcaggctttgctctct 5063
>gb|AY061424.1| Drosophila melanogaster LD35669 full length cDNA Length = 1746 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 gaggagcagaggaccaaggcactg 143 ||||||||| |||||||||||||| Sbjct: 1556 gaggagcagtggaccaaggcactg 1579
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ccgccgtggcggcgcagccc 113 |||||||||||||||||||| Sbjct: 4638690 ccgccgtggcggcgcagccc 4638671
>dbj|AB179352.1| Macaca fascicularis testis cDNA clone: QtsA-18131, similar to human extra spindle poles like 1 (S. cerevisiae) (ESPL1), mRNA, RefSeq: NM_012291.3 Length = 4882 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 240 gacgatcttcctggtgtttatctt 263 |||||||||||||| ||||||||| Sbjct: 524 gacgatcttcctggagtttatctt 501
>gb|AC159195.2| Mus musculus BAC clone RP23-467E1 from chromosome 13, complete sequence Length = 194915 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 acattctccaagtgcagagc 218 |||||||||||||||||||| Sbjct: 35958 acattctccaagtgcagagc 35939
>gb|AC153372.5| Mus musculus 6 BAC RP23-358G19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 230623 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 gttaccattccgaagactca 287 |||||||||||||||||||| Sbjct: 141259 gttaccattccgaagactca 141278
>dbj|AK028310.1| Mus musculus adult male brain cDNA, RIKEN full-length enriched library, clone:3526401J04 product:unclassifiable, full insert sequence Length = 2905 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 acattctccaagtgcagagc 218 |||||||||||||||||||| Sbjct: 1036 acattctccaagtgcagagc 1055
>emb|CR353540.1| Gallus gallus finished cDNA, clone ChEST129e8 Length = 1175 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 cagctccgaggagcagagga 132 |||||||||||||||||||| Sbjct: 407 cagctccgaggagcagagga 426
>gb|AC008202.4|AC008202 Drosophila melanogaster, chromosome 3R, region 95C-95D, BAC clone BACR15J11, complete sequence Length = 186159 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 gaggagcagaggaccaaggcactg 143 ||||||||| |||||||||||||| Sbjct: 117786 gaggagcagtggaccaaggcactg 117763
>gb|AC106817.2| Homo sapiens chromosome 5 clone RP11-636F7, complete sequence Length = 169232 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 aggctttgctctcttgccca 164 |||||||||||||||||||| Sbjct: 105393 aggctttgctctcttgccca 105412
>dbj|AP004131.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1057_F01 Length = 120026 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 cataatggttgacagtccaa 348 |||||||||||||||||||| Sbjct: 90488 cataatggttgacagtccaa 90507
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 30 tgcatcgactgcgccacctgccggtggatggc 61 ||||||||||||| ||||||||| ||| |||| Sbjct: 4357197 tgcatcgactgcgacacctgccgctgggtggc 4357228
>dbj|AP005291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1282_H11 Length = 143314 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 tcttcctggtgtttatcttt 264 |||||||||||||||||||| Sbjct: 124632 tcttcctggtgtttatcttt 124613
>dbj|AP005306.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030D07 Length = 133321 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 tcttcctggtgtttatcttt 264 |||||||||||||||||||| Sbjct: 37164 tcttcctggtgtttatcttt 37145
>emb|X14965.1|PSMUTAB Propionibacterium shermanii mutA and mutB genes for methylmalonyl-CoA mutase (EC 5.4.99.2) Length = 4512 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 ccgacaagccggcgaaggac 200 |||||||||||||||||||| Sbjct: 920 ccgacaagccggcgaaggac 939
>emb|CT025522.17| Mouse DNA sequence from clone RP23-332L23 on chromosome 16, complete sequence Length = 199628 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 ttggaaatgattttgaactt 566 |||||||||||||||||||| Sbjct: 182261 ttggaaatgattttgaactt 182280
>gb|AC167563.3| Mus musculus BAC clone RP24-392I11 from chromosome 16, complete sequence Length = 201682 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 547 ttggaaatgattttgaactt 566 |||||||||||||||||||| Sbjct: 145587 ttggaaatgattttgaactt 145568
>gb|AE003746.3| Drosophila melanogaster chromosome 3R, section 84 of 118 of the complete sequence Length = 218498 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 gaggagcagaggaccaaggcactg 143 ||||||||| |||||||||||||| Sbjct: 17498 gaggagcagtggaccaaggcactg 17475
>gb|AC153565.5| Mus musculus 10 BAC RP23-228H2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 187589 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 ggagcaacatcttatcttataatt 314 |||||||||| ||||||||||||| Sbjct: 180273 ggagcaacatattatcttataatt 180250 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,090,298 Number of Sequences: 3902068 Number of extensions: 4090298 Number of successful extensions: 80841 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80389 Number of HSP's gapped (non-prelim): 442 length of query: 571 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 548 effective length of database: 17,143,297,704 effective search space: 9394527141792 effective search space used: 9394527141792 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)