| Clone Name | bags19m03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467236.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1876 Score = 807 bits (407), Expect = 0.0 Identities = 548/595 (92%) Strand = Plus / Plus Query: 2 cggccatctacttcctcaaccttcgcggggacgtcctcatcaatcgcctataccgcgacg 61 |||||||||||||||||||||| || ||||||||||||||||| ||||| |||||||||| Sbjct: 220 cggccatctacttcctcaacctccgaggggacgtcctcatcaaccgcctctaccgcgacg 279 Query: 62 atgtcgggggaaatatggttgatgcattcaggatgcacattatgcaaacaaaagagcttg 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 280 atgtcgggggaaatatggttgatgcattcaggatgcacattatgcaaacaaaagaactgg 339 Query: 122 gtacatgccctgttcgacaaataggaggctgttccttcctttacatgaggatcagtaatg 181 |||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 340 gtacatgccctgttcggcaaataggaggctgttcattcctttacatgaggattagtaatg 399 Query: 182 tttacattgtgatcgtggttagcagcaatgctaatgtttcttgtgctttcaagtttgttg 241 | || ||||||||||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct: 400 tctatattgtgatcgtggttagcagcaatgctaatgttgcttgtgctttcaagtttgtcg 459 Query: 242 tggaggcagtggccctcttcaagtcctactttggtggaacttttgatgaagatgctatca 301 ||||||||||||| || |||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 460 tggaggcagtggctcttttcaagtcatactttggtggtgcttttgatgaagatgctatca 519 Query: 302 ggaataactttgtgttaatatacgagcttcttgatgagattatggacttcggttatcctc 361 | ||||||||||| ||||| || |||||||||||||| ||||||||||||||||| |||| Sbjct: 520 gaaataactttgttttaatctatgagcttcttgatgaaattatggacttcggttaccctc 579 Query: 362 agaatctctcacctgaaattttgaagttatatataacccaggaaggcgtacgatcgccat 421 | || |||||||||||||| || || || |||||||| || ||||| || || ||||||| Sbjct: 580 aaaacctctcacctgaaatcttaaaattgtatataactcaagaaggagttcggtcgccat 639 Query: 422 tttcctccaagccttcggataagccagttccaaatgcgaccctgcaagttactggcgctg 481 |||||||||||||||| |||||||| ||||| ||||| || || ||||||||||| |||| Sbjct: 640 tttcctccaagccttcagataagcctgttccgaatgccactctacaagttactggtgctg 699 Query: 482 ttggttggagaagagagggtcttgtgtacaagaagaatgaggttttcttggacattgttg 541 ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 700 ttggttggagaagagagggtcttatgtacaagaagaacgaggttttcttggacattgttg 759 Query: 542 agagcgtaaaccttcttatgtcttctaaagggagtgttctacgatgtgatgtgac 596 | || ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 760 aaagtgtaaatcttcttatgtcttctaaagggagtgttctacgatgtgatgtgac 814
>dbj|AK102342.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091B08, full insert sequence Length = 1876 Score = 807 bits (407), Expect = 0.0 Identities = 548/595 (92%) Strand = Plus / Plus Query: 2 cggccatctacttcctcaaccttcgcggggacgtcctcatcaatcgcctataccgcgacg 61 |||||||||||||||||||||| || ||||||||||||||||| ||||| |||||||||| Sbjct: 220 cggccatctacttcctcaacctccgaggggacgtcctcatcaaccgcctctaccgcgacg 279 Query: 62 atgtcgggggaaatatggttgatgcattcaggatgcacattatgcaaacaaaagagcttg 121 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 280 atgtcgggggaaatatggttgatgcattcaggatgcacattatgcaaacaaaagaactgg 339 Query: 122 gtacatgccctgttcgacaaataggaggctgttccttcctttacatgaggatcagtaatg 181 |||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 340 gtacatgccctgttcggcaaataggaggctgttcattcctttacatgaggattagtaatg 399 Query: 182 tttacattgtgatcgtggttagcagcaatgctaatgtttcttgtgctttcaagtttgttg 241 | || ||||||||||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct: 400 tctatattgtgatcgtggttagcagcaatgctaatgttgcttgtgctttcaagtttgtcg 459 Query: 242 tggaggcagtggccctcttcaagtcctactttggtggaacttttgatgaagatgctatca 301 ||||||||||||| || |||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 460 tggaggcagtggctcttttcaagtcatactttggtggtgcttttgatgaagatgctatca 519 Query: 302 ggaataactttgtgttaatatacgagcttcttgatgagattatggacttcggttatcctc 361 | ||||||||||| ||||| || |||||||||||||| ||||||||||||||||| |||| Sbjct: 520 gaaataactttgttttaatctatgagcttcttgatgaaattatggacttcggttaccctc 579 Query: 362 agaatctctcacctgaaattttgaagttatatataacccaggaaggcgtacgatcgccat 421 | || |||||||||||||| || || || |||||||| || ||||| || || ||||||| Sbjct: 580 aaaacctctcacctgaaatcttaaaattgtatataactcaagaaggagttcggtcgccat 639 Query: 422 tttcctccaagccttcggataagccagttccaaatgcgaccctgcaagttactggcgctg 481 |||||||||||||||| |||||||| ||||| ||||| || || ||||||||||| |||| Sbjct: 640 tttcctccaagccttcagataagcctgttccgaatgccactctacaagttactggtgctg 699 Query: 482 ttggttggagaagagagggtcttgtgtacaagaagaatgaggttttcttggacattgttg 541 ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 700 ttggttggagaagagagggtcttatgtacaagaagaacgaggttttcttggacattgttg 759 Query: 542 agagcgtaaaccttcttatgtcttctaaagggagtgttctacgatgtgatgtgac 596 | || ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 760 aaagtgtaaatcttcttatgtcttctaaagggagtgttctacgatgtgatgtgac 814
>gb|AY106723.1| Zea mays PCO110570 mRNA sequence Length = 1984 Score = 751 bits (379), Expect = 0.0 Identities = 541/595 (90%) Strand = Plus / Plus Query: 2 cggccatctacttcctcaaccttcgcggggacgtcctcatcaatcgcctataccgcgacg 61 ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || | Sbjct: 197 cggccatctacttcctcaaccttcgcggggacgtcctcatcaaccgcctctaccgtgatg 256 Query: 62 atgtcgggggaaatatggttgatgcattcaggatgcacattatgcaaacaaaagagcttg 121 |||| |||||||||||||||||||| ||||| ||||| || |||||||||||||| |||| Sbjct: 257 atgttgggggaaatatggttgatgcgttcagaatgcatatcatgcaaacaaaagaacttg 316 Query: 122 gtacatgccctgttcgacaaataggaggctgttccttcctttacatgaggatcagtaatg 181 | |||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 317 gcacatgccctgttcgtcaaataggaggctgctccttcctttatatgaggatcagtaatg 376 Query: 182 tttacattgtgatcgtggttagcagcaatgctaatgtttcttgtgctttcaagtttgttg 241 |||||||||||||||| ||||||||||||||||||||| | ||||||||||| ||||||| Sbjct: 377 tttacattgtgatcgtagttagcagcaatgctaatgttgcatgtgctttcaaatttgttg 436 Query: 242 tggaggcagtggccctcttcaagtcctactttggtggaacttttgatgaagatgctatca 301 | ||||| ||||| ||||||||||||||||| |||||| ||||||||||||| ||||||| Sbjct: 437 tcgaggcggtggctctcttcaagtcctacttcggtggagcttttgatgaagacgctatca 496 Query: 302 ggaataactttgtgttaatatacgagcttcttgatgagattatggacttcggttatcctc 361 ||||||||||||| || ||||| || |||||||||||||| ||||| || |||||||||| Sbjct: 497 ggaataactttgttttgatatatgaacttcttgatgagatcatggattttggttatcctc 556 Query: 362 agaatctctcacctgaaattttgaagttatatataacccaggaaggcgtacgatcgccat 421 | || || |||||||||||||||||||| |||||||| || ||||| || || || |||| Sbjct: 557 aaaacctgtcacctgaaattttgaagttgtatataactcaagaaggtgttcggtcaccat 616 Query: 422 tttcctccaagccttcggataagccagttccaaatgcgaccctgcaagttactggcgctg 481 ||||||| ||||| || || ||||| |||||||||||||| || ||||| |||||||||| Sbjct: 617 tttcctcaaagccctcagagaagcctgttccaaatgcgactcttcaagtcactggcgctg 676 Query: 482 ttggttggagaagagagggtcttgtgtacaagaagaatgaggttttcttggacattgttg 541 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 677 ttggttggagaagagagggacttgtgtacaagaagaatgaggttttcttggacatagttg 736 Query: 542 agagcgtaaaccttcttatgtcttctaaagggagtgttctacgatgtgatgtgac 596 |||| |||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 737 agagtgtaaaccttcttatgtcttcgaaagggagtgttctaagatgtgatgtgac 791
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 285 bits (144), Expect = 8e-74 Identities = 171/180 (95%) Strand = Plus / Plus Query: 68 ggggaaatatggttgatgcattcaggatgcacattatgcaaacaaaagagcttggtacat 127 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 28375125 ggggaaatatggttgatgcattcaggatgcacattatgcaaacaaaagaactgggtacat 28375184 Query: 128 gccctgttcgacaaataggaggctgttccttcctttacatgaggatcagtaatgtttaca 187 |||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| || | Sbjct: 28375185 gccctgttcggcaaataggaggctgttcattcctttacatgaggattagtaatgtctata 28375244 Query: 188 ttgtgatcgtggttagcagcaatgctaatgtttcttgtgctttcaagtttgttgtggagg 247 |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| Sbjct: 28375245 ttgtgatcgtggttagcagcaatgctaatgttgcttgtgctttcaagtttgtcgtggagg 28375304 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Plus Query: 431 agccttcggataagccagttccaaatgcgaccctgcaagttactggcgctgttggttgga 490 ||||||| |||||||| ||||| ||||| || || ||||||||||| ||||||||||||| Sbjct: 28376377 agccttcagataagcctgttccgaatgccactctacaagttactggtgctgttggttgga 28376436 Query: 491 gaagagagggtcttgtgtacaagaagaatgaggt 524 |||||||||||||| ||||||||||||| ||||| Sbjct: 28376437 gaagagagggtcttatgtacaagaagaacgaggt 28376470 Score = 113 bits (57), Expect = 7e-22 Identities = 84/93 (90%) Strand = Plus / Plus Query: 245 aggcagtggccctcttcaagtcctactttggtggaacttttgatgaagatgctatcagga 304 |||||||||| || |||||||| ||||||||||| |||||||||||||||||||||| | Sbjct: 28375973 aggcagtggctcttttcaagtcatactttggtggtgcttttgatgaagatgctatcagaa 28376032 Query: 305 ataactttgtgttaatatacgagcttcttgatg 337 |||||||||| ||||| || ||||||||||||| Sbjct: 28376033 ataactttgttttaatctatgagcttcttgatg 28376065 Score = 103 bits (52), Expect = 7e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 2 cggccatctacttcctcaaccttcgcggggacgtcctcatcaatcgcctataccgcgacg 61 |||||||||||||||||||||| || ||||||||||||||||| ||||| |||||||||| Sbjct: 28374314 cggccatctacttcctcaacctccgaggggacgtcctcatcaaccgcctctaccgcgacg 28374373 Query: 62 atgtcggg 69 |||||||| Sbjct: 28374374 atgtcggg 28374381 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 340 attatggacttcggttatcctcagaatctctcacctgaaattttgaagttatatataacc 399 ||||||||||||||||| ||||| || |||||||||||||| || || || |||||||| Sbjct: 28376164 attatggacttcggttaccctcaaaacctctcacctgaaatcttaaaattgtatataact 28376223 Query: 400 caggaaggcgtacgatcgccattttcctccaag 432 || ||||| || || |||||||||||||||||| Sbjct: 28376224 caagaaggagttcggtcgccattttcctccaag 28376256 Score = 79.8 bits (40), Expect = 9e-12 Identities = 49/52 (94%) Strand = Plus / Plus Query: 521 aggttttcttggacattgttgagagcgtaaaccttcttatgtcttctaaagg 572 |||||||||||||||||||||| || ||||| |||||||||||||||||||| Sbjct: 28376787 aggttttcttggacattgttgaaagtgtaaatcttcttatgtcttctaaagg 28376838 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 570 agggagtgttctacgatgtgatgtgac 596 ||||||||||||||||||||||||||| Sbjct: 28376939 agggagtgttctacgatgtgatgtgac 28376965
>dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1743_B12 Length = 175645 Score = 285 bits (144), Expect = 8e-74 Identities = 171/180 (95%) Strand = Plus / Plus Query: 68 ggggaaatatggttgatgcattcaggatgcacattatgcaaacaaaagagcttggtacat 127 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 166882 ggggaaatatggttgatgcattcaggatgcacattatgcaaacaaaagaactgggtacat 166941 Query: 128 gccctgttcgacaaataggaggctgttccttcctttacatgaggatcagtaatgtttaca 187 |||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| || | Sbjct: 166942 gccctgttcggcaaataggaggctgttcattcctttacatgaggattagtaatgtctata 167001 Query: 188 ttgtgatcgtggttagcagcaatgctaatgtttcttgtgctttcaagtttgttgtggagg 247 |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| Sbjct: 167002 ttgtgatcgtggttagcagcaatgctaatgttgcttgtgctttcaagtttgtcgtggagg 167061 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Plus Query: 431 agccttcggataagccagttccaaatgcgaccctgcaagttactggcgctgttggttgga 490 ||||||| |||||||| ||||| ||||| || || ||||||||||| ||||||||||||| Sbjct: 168134 agccttcagataagcctgttccgaatgccactctacaagttactggtgctgttggttgga 168193 Query: 491 gaagagagggtcttgtgtacaagaagaatgaggt 524 |||||||||||||| ||||||||||||| ||||| Sbjct: 168194 gaagagagggtcttatgtacaagaagaacgaggt 168227 Score = 113 bits (57), Expect = 7e-22 Identities = 84/93 (90%) Strand = Plus / Plus Query: 245 aggcagtggccctcttcaagtcctactttggtggaacttttgatgaagatgctatcagga 304 |||||||||| || |||||||| ||||||||||| |||||||||||||||||||||| | Sbjct: 167730 aggcagtggctcttttcaagtcatactttggtggtgcttttgatgaagatgctatcagaa 167789 Query: 305 ataactttgtgttaatatacgagcttcttgatg 337 |||||||||| ||||| || ||||||||||||| Sbjct: 167790 ataactttgttttaatctatgagcttcttgatg 167822 Score = 103 bits (52), Expect = 7e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 2 cggccatctacttcctcaaccttcgcggggacgtcctcatcaatcgcctataccgcgacg 61 |||||||||||||||||||||| || ||||||||||||||||| ||||| |||||||||| Sbjct: 166071 cggccatctacttcctcaacctccgaggggacgtcctcatcaaccgcctctaccgcgacg 166130 Query: 62 atgtcggg 69 |||||||| Sbjct: 166131 atgtcggg 166138 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 340 attatggacttcggttatcctcagaatctctcacctgaaattttgaagttatatataacc 399 ||||||||||||||||| ||||| || |||||||||||||| || || || |||||||| Sbjct: 167921 attatggacttcggttaccctcaaaacctctcacctgaaatcttaaaattgtatataact 167980 Query: 400 caggaaggcgtacgatcgccattttcctccaag 432 || ||||| || || |||||||||||||||||| Sbjct: 167981 caagaaggagttcggtcgccattttcctccaag 168013 Score = 79.8 bits (40), Expect = 9e-12 Identities = 49/52 (94%) Strand = Plus / Plus Query: 521 aggttttcttggacattgttgagagcgtaaaccttcttatgtcttctaaagg 572 |||||||||||||||||||||| || ||||| |||||||||||||||||||| Sbjct: 168544 aggttttcttggacattgttgaaagtgtaaatcttcttatgtcttctaaagg 168595 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 570 agggagtgttctacgatgtgatgtgac 596 ||||||||||||||||||||||||||| Sbjct: 168696 agggagtgttctacgatgtgatgtgac 168722
>ref|NM_203166.1| Arabidopsis thaliana unknown protein AT5G46630 transcript variant AT5G46630.2 mRNA, complete cds Length = 1843 Score = 216 bits (109), Expect = 6e-53 Identities = 346/425 (81%) Strand = Plus / Plus Query: 172 atcagtaatgtttacattgtgatcgtggttagcagcaatgctaatgtttcttgtgctttc 231 ||||| ||||| ||||| || || || || || ||||||||||||||| |||||| ||| Sbjct: 319 atcagcaatgtctacatcgtcattgttgtcagtagcaatgctaatgttgcttgtggattc 378 Query: 232 aagtttgttgtggaggcagtggccctcttcaagtcctactttggtggaacttttgatgaa 291 || |||||||| ||||| || || | ||||| || |||||||||||| ||||||||||| Sbjct: 379 aaatttgttgttgaggctgtagctttgttcaaatcatactttggtggagcttttgatgaa 438 Query: 292 gatgctatcaggaataactttgtgttaatatacgagcttcttgatgagattatggacttc 351 || ||||| || ||||||||||| | || || || | | ||||||||||||||||| Sbjct: 439 gacgctattagaaataactttgttctgatttatgaattgttggatgagattatggacttt 498 Query: 352 ggttatcctcagaatctctcacctgaaattttgaagttatatataacccaggaaggcgta 411 || ||||| || |||||||||||||||||||| || | ||||| || |||||||| ||| Sbjct: 499 ggctatccacaaaatctctcacctgaaattttaaaactttatatcactcaggaaggtgta 558 Query: 412 cgatcgccattttcctccaagccttcggataagccagttccaaatgcgaccctgcaagtt 471 || || |||||||| || ||||| || || || ||||||||||| || | |||||| Sbjct: 559 cggtcaccattttcatcgaagccaaaagacaaacctgttccaaatgcaacattacaagtt 618 Query: 472 actggcgctgttggttggagaagagagggtcttgtgtacaagaagaatgaggttttcttg 531 || || ||||||||||||||||||||||| |||| ||||| ||||||||||| || || Sbjct: 619 acaggtgctgttggttggagaagagagggccttgcttacaaaaagaatgaggtgtttctg 678 Query: 532 gacattgttgagagcgtaaaccttcttatgtcttctaaagggagtgttctacgatgtgat 591 || ||||| || || ||||||||||| ||||| |||||||| | |||||| || |||||| Sbjct: 679 gatattgtggaaagtgtaaaccttctgatgtcctctaaaggcaatgttcttcggtgtgat 738 Query: 592 gtgac 596 ||||| Sbjct: 739 gtgac 743
>ref|NM_124033.2| Arabidopsis thaliana unknown protein AT5G46630 transcript variant AT5G46630.1 mRNA, complete cds Length = 1688 Score = 216 bits (109), Expect = 6e-53 Identities = 346/425 (81%) Strand = Plus / Plus Query: 172 atcagtaatgtttacattgtgatcgtggttagcagcaatgctaatgtttcttgtgctttc 231 ||||| ||||| ||||| || || || || || ||||||||||||||| |||||| ||| Sbjct: 319 atcagcaatgtctacatcgtcattgttgtcagtagcaatgctaatgttgcttgtggattc 378 Query: 232 aagtttgttgtggaggcagtggccctcttcaagtcctactttggtggaacttttgatgaa 291 || |||||||| ||||| || || | ||||| || |||||||||||| ||||||||||| Sbjct: 379 aaatttgttgttgaggctgtagctttgttcaaatcatactttggtggagcttttgatgaa 438 Query: 292 gatgctatcaggaataactttgtgttaatatacgagcttcttgatgagattatggacttc 351 || ||||| || ||||||||||| | || || || | | ||||||||||||||||| Sbjct: 439 gacgctattagaaataactttgttctgatttatgaattgttggatgagattatggacttt 498 Query: 352 ggttatcctcagaatctctcacctgaaattttgaagttatatataacccaggaaggcgta 411 || ||||| || |||||||||||||||||||| || | ||||| || |||||||| ||| Sbjct: 499 ggctatccacaaaatctctcacctgaaattttaaaactttatatcactcaggaaggtgta 558 Query: 412 cgatcgccattttcctccaagccttcggataagccagttccaaatgcgaccctgcaagtt 471 || || |||||||| || ||||| || || || ||||||||||| || | |||||| Sbjct: 559 cggtcaccattttcatcgaagccaaaagacaaacctgttccaaatgcaacattacaagtt 618 Query: 472 actggcgctgttggttggagaagagagggtcttgtgtacaagaagaatgaggttttcttg 531 || || ||||||||||||||||||||||| |||| ||||| ||||||||||| || || Sbjct: 619 acaggtgctgttggttggagaagagagggccttgcttacaaaaagaatgaggtgtttctg 678 Query: 532 gacattgttgagagcgtaaaccttcttatgtcttctaaagggagtgttctacgatgtgat 591 || ||||| || || ||||||||||| ||||| |||||||| | |||||| || |||||| Sbjct: 679 gatattgtggaaagtgtaaaccttctgatgtcctctaaaggcaatgttcttcggtgtgat 738 Query: 592 gtgac 596 ||||| Sbjct: 739 gtgac 743
>gb|AF385713.1|AF385713 Arabidopsis thaliana AT5g46630/MZA15_2 mRNA, complete sequence Length = 1686 Score = 216 bits (109), Expect = 6e-53 Identities = 346/425 (81%) Strand = Plus / Plus Query: 172 atcagtaatgtttacattgtgatcgtggttagcagcaatgctaatgtttcttgtgctttc 231 ||||| ||||| ||||| || || || || || ||||||||||||||| |||||| ||| Sbjct: 319 atcagcaatgtctacatcgtcattgttgtcagtagcaatgctaatgttgcttgtggattc 378 Query: 232 aagtttgttgtggaggcagtggccctcttcaagtcctactttggtggaacttttgatgaa 291 || |||||||| ||||| || || | ||||| || |||||||||||| ||||||||||| Sbjct: 379 aaatttgttgttgaggctgtagctttgttcaaatcatactttggtggagcttttgatgaa 438 Query: 292 gatgctatcaggaataactttgtgttaatatacgagcttcttgatgagattatggacttc 351 || ||||| || ||||||||||| | || || || | | ||||||||||||||||| Sbjct: 439 gacgctattagaaataactttgttctgatttatgaattgttggatgagattatggacttt 498 Query: 352 ggttatcctcagaatctctcacctgaaattttgaagttatatataacccaggaaggcgta 411 || ||||| || |||||||||||||||||||| || | ||||| || |||||||| ||| Sbjct: 499 ggctatccacaaaatctctcacctgaaattttaaaactttatatcactcaggaaggtgta 558 Query: 412 cgatcgccattttcctccaagccttcggataagccagttccaaatgcgaccctgcaagtt 471 || || |||||||| || ||||| || || || ||||||||||| || | |||||| Sbjct: 559 cggtcaccattttcatcgaagccaaaagacaaacctgttccaaatgcaacattacaagtt 618 Query: 472 actggcgctgttggttggagaagagagggtcttgtgtacaagaagaatgaggttttcttg 531 || || ||||||||||||||||||||||| |||| ||||| ||||||||||| || || Sbjct: 619 acaggtgctgttggttggagaagagagggccttgcttacaaaaagaatgaggtgtttctg 678 Query: 532 gacattgttgagagcgtaaaccttcttatgtcttctaaagggagtgttctacgatgtgat 591 || ||||| || || ||||||||||| ||||| |||||||| | |||||| || |||||| Sbjct: 679 gatattgtggaaagtgtaaaccttctgatgtcctctaaaggcaatgttcttcggtgtgat 738 Query: 592 gtgac 596 ||||| Sbjct: 739 gtgac 743
>emb|BX830242.1|CNS0A069 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB68ZE02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1723 Score = 216 bits (109), Expect = 6e-53 Identities = 346/425 (81%) Strand = Plus / Plus Query: 172 atcagtaatgtttacattgtgatcgtggttagcagcaatgctaatgtttcttgtgctttc 231 ||||| ||||| ||||| || || || || || ||||||||||||||| |||||| ||| Sbjct: 318 atcagcaatgtctacatcgtcattgttgtcagtagcaatgctaatgttgcttgtggattc 377 Query: 232 aagtttgttgtggaggcagtggccctcttcaagtcctactttggtggaacttttgatgaa 291 || |||||||| ||||| || || | ||||| || |||||||||||| ||||||||||| Sbjct: 378 aaatttgttgttgaggctgtagctttgttcaaatcatactttggtggagcttttgatgaa 437 Query: 292 gatgctatcaggaataactttgtgttaatatacgagcttcttgatgagattatggacttc 351 || ||||| || ||||||||||| | || || || | | ||||||||||||||||| Sbjct: 438 gacgctattagaaataactttgttctgatttatgaattgttggatgagattatggacttt 497 Query: 352 ggttatcctcagaatctctcacctgaaattttgaagttatatataacccaggaaggcgta 411 || ||||| || |||||||||||||||||||| || | ||||| || |||||||| ||| Sbjct: 498 ggctatccacaaaatctctcacctgaaattttaaaactttatatcactcaggaaggtgta 557 Query: 412 cgatcgccattttcctccaagccttcggataagccagttccaaatgcgaccctgcaagtt 471 || || |||||||| || ||||| || || || ||||||||||| || | |||||| Sbjct: 558 cggtcaccattttcatcgaagccaaaagacaaacctgttccaaatgcaacattacaagtt 617 Query: 472 actggcgctgttggttggagaagagagggtcttgtgtacaagaagaatgaggttttcttg 531 || || ||||||||||||||||||||||| |||| ||||| ||||||||||| || || Sbjct: 618 acaggtgctgttggttggagaagagagggccttgcttacaaaaagaatgaggtgtttctg 677 Query: 532 gacattgttgagagcgtaaaccttcttatgtcttctaaagggagtgttctacgatgtgat 591 || ||||| || || ||||||||||| ||||| |||||||| | |||||| || |||||| Sbjct: 678 gatattgtggaaagtgtaaaccttctgatgtcctctaaaggcaatgttcttcggtgtgat 737 Query: 592 gtgac 596 ||||| Sbjct: 738 gtgac 742
>gb|AF009631.1|AF009631 Arabidopsis thaliana AP47/50p mRNA, complete cds Length = 1662 Score = 200 bits (101), Expect = 4e-48 Identities = 344/425 (80%) Strand = Plus / Plus Query: 172 atcagtaatgtttacattgtgatcgtggttagcagcaatgctaatgtttcttgtgctttc 231 ||||| ||||| |||||||| || || || || ||||||||||| ||| |||||| ||| Sbjct: 322 atcagcaatgtctacattgtcattgttgtcagtagcaatgctaacgttgcttgtggattc 381 Query: 232 aagtttgttgtggaggcagtggccctcttcaagtcctactttggtggaacttttgatgaa 291 || || ||||| ||||| || || | ||||| || |||||||||||| ||||||||||| Sbjct: 382 aaattcgttgttgaggctgttgctttgttcaaatcatactttggtggagcttttgatgaa 441 Query: 292 gatgctatcaggaataactttgtgttaatatacgagcttcttgatgagattatggacttc 351 || ||||| || ||||||||||| | || || || | | || |||||||||||||| Sbjct: 442 gacgctattagaaataactttgttctgatttatgaattgttggacgagattatggacttt 501 Query: 352 ggttatcctcagaatctctcacctgaaattttgaagttatatataacccaggaaggcgta 411 || ||||| || |||||||| |||||||||||||| | ||||| || |||||||| ||| Sbjct: 502 ggctatccacaaaatctctcccctgaaattttgaaactttatatcactcaggaaggtgta 561 Query: 412 cgatcgccattttcctccaagccttcggataagccagttccaaatgcgaccctgcaagtt 471 || || |||||||| || ||||| ||| ||||| ||||||||||| || | |||||| Sbjct: 562 cggtcaccattttcatcgaagccaaaggacaagcctgttccaaatgcaacattacaagtt 621 Query: 472 actggcgctgttggttggagaagagagggtcttgtgtacaagaagaatgaggttttcttg 531 || || ||||||||||||||||||||||| |||| || || ||||||||||| || || Sbjct: 622 acgggtgctgttggttggagaagagagggccttgcttataaaaagaatgaggtgtttctg 681 Query: 532 gacattgttgagagcgtaaaccttcttatgtcttctaaagggagtgttctacgatgtgat 591 || ||||| || || ||||||||||| ||||| |||||||| | ||||| || |||||| Sbjct: 682 gatattgtggaaagtgtaaaccttctgatgtcctctaaaggcaacgttcttcggtgtgat 741 Query: 592 gtgac 596 ||||| Sbjct: 742 gtgac 746
>emb|BX830780.1|CNS09ZI4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS21ZH08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1533 Score = 192 bits (97), Expect = 9e-46 Identities = 343/425 (80%) Strand = Plus / Plus Query: 172 atcagtaatgtttacattgtgatcgtggttagcagcaatgctaatgtttcttgtgctttc 231 ||||| ||||| ||||| || || || || || ||||||||||||||| |||||| ||| Sbjct: 312 atcagcaatgtctacatcgtcattgttgtcagtagcaatgctaatgttgcttgtggattc 371 Query: 232 aagtttgttgtggaggcagtggccctcttcaagtcctactttggtggaacttttgatgaa 291 || |||||||| ||||| || || | ||||| || |||||||||||| ||||||||||| Sbjct: 372 aaatttgttgttgaggctgtagctttgttcaaatcatactttggtggagcttttgatgaa 431 Query: 292 gatgctatcaggaataactttgtgttaatatacgagcttcttgatgagattatggacttc 351 || ||||| || ||| ||||||| | || || || | | ||||||||||||||||| Sbjct: 432 gacgctattagaaatgactttgttctgatttatgaattgttggatgagattatggacttt 491 Query: 352 ggttatcctcagaatctctcacctgaaattttgaagttatatataacccaggaaggcgta 411 || ||||| || |||||||||||||| ||||| | | ||||| || |||||||| ||| Sbjct: 492 ggctatccacaaaatctctcacctgagattttaagactttatatcactcaggaaggtgta 551 Query: 412 cgatcgccattttcctccaagccttcggataagccagttccaaatgcgaccctgcaagtt 471 || || |||||||| || ||||| || || || ||||||||||| || | |||||| Sbjct: 552 cggtcaccattttcatcgaagccaaaagacaaacctgttccaaatgcaacattacaagtt 611 Query: 472 actggcgctgttggttggagaagagagggtcttgtgtacaagaagaatgaggttttcttg 531 || || ||||||||||||||||||||||| |||| ||||| ||||||||||| || || Sbjct: 612 acaggtgctgttggttggagaagagagggccttgcttacaaaaagaatgaggtgtttctg 671 Query: 532 gacattgttgagagcgtaaaccttcttatgtcttctaaagggagtgttctacgatgtgat 591 || ||||| || || ||||||||||| ||||| |||||||| | |||||| || |||||| Sbjct: 672 gatattgtggaaagtgtaaaccttctgatgtcctctaaaggcaatgttcttcggtgtgat 731 Query: 592 gtgac 596 ||||| Sbjct: 732 gtgac 736
>emb|BX841656.1|CNS09YHR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS45ZA12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1568 Score = 161 bits (81), Expect = 3e-36 Identities = 340/425 (80%), Gaps = 1/425 (0%) Strand = Plus / Plus Query: 172 atcagtaatgtttacattgtgatcgtggttagcagcaatgctaatgtttcttgtgctttc 231 ||||| ||||| ||||| || || || || || ||||||||||||||| |||||| ||| Sbjct: 296 atcagcaatgtctacatcgtcattgttgtcagtagcaatgctaatgttgcttgtggattc 355 Query: 232 aagtttgttgtggaggcagtggccctcttcaagtcctactttggtggaacttttgatgaa 291 || |||||||| ||||| || || | ||||| || |||||||||||| ||||||||||| Sbjct: 356 aaatttgttgttgaggctgtagctttgttcaaatcatactttggtggagcttttgatgaa 415 Query: 292 gatgctatcaggaataactttgtgttaatatacgagcttcttgatgagattatggacttc 351 || ||||| || || ||||||| | || || || | | ||||||||||||||||| Sbjct: 416 gacgctattagagatgactttgttctgatttatgaattgttggatgagattatggacttt 475 Query: 352 ggttatcctcagaatctctcacctgaaattttgaagttatatataacccaggaaggcgta 411 || ||||| || |||||||||||||| ||||| | | ||||| || |||||||| ||| Sbjct: 476 ggctatccacaaaatctctcacctgagattttaagactttatatcactcaggaaggtgta 535 Query: 412 cgatcgccattttcctccaagccttcggataagccagttccaaatgcgaccctgcaagtt 471 || || |||||||| || ||||| || || || ||||||||||| || | |||||| Sbjct: 536 cggtcaccattttcatcgaagccaaaagacaaacctgttccaaatgcaacattacaagtt 595 Query: 472 actggcgctgttggttggagaagagagggtcttgtgtacaagaagaatgaggttttcttg 531 || || ||||||||||||||||||||||| |||| ||||| |||||||||| || || Sbjct: 596 acaggtgctgttggttggagaagagagggccttgcttacaaagagaatgaggtgtttctg 655 Query: 532 gacattgttgagagcgtaaaccttcttatgtcttctaaagggagtgttctacgatgtgat 591 || ||||| || || || |||||||| ||||| |||||||| | |||||| || |||||| Sbjct: 656 gatattgtggaaagtgt-aaccttctgatgtcctctaaaggcaatgttcttcggtgtgat 714 Query: 592 gtgac 596 ||||| Sbjct: 715 gtgac 719
>gb|BT012777.1| Lycopersicon esculentum clone 113756F, mRNA sequence Length = 1877 Score = 133 bits (67), Expect = 7e-28 Identities = 232/287 (80%) Strand = Plus / Plus Query: 10 tacttcctcaaccttcgcggggacgtcctcatcaatcgcctataccgcgacgatgtcggg 69 ||||||||||| || || || || |||||||||||||| |||||||| ||||| |||||| Sbjct: 562 tacttcctcaatctccgtggcgatgtcctcatcaatcgtctataccgtgacgacgtcggg 621 Query: 70 ggaaatatggttgatgcattcaggatgcacattatgcaaacaaaagagcttggtacatgc 129 || |||||||| ||||| || ||||||| || ||||| |||||||| || || ||||| Sbjct: 622 ggtaatatggtagatgcctttcggatgcatataatgcagacaaaagaactcgggacatgt 681 Query: 130 cctgttcgacaaataggaggctgttccttcctttacatgaggatcagtaatgtttacatt 189 ||||| | || || ||||| || || ||| | |||||||| || || ||||| || ||| Sbjct: 682 cctgtcaggcagattggaggttgctctttcttctacatgagaattagcaatgtctatatt 741 Query: 190 gtgatcgtggttagcagcaatgctaatgtttcttgtgctttcaagtttgttgtggaggca 249 ||||| || ||||||| |||||| ||||| | ||||| ||||||||||| || ||||| Sbjct: 742 gtgattgtagttagcaccaatgcaaatgtcgcatgtgcattcaagtttgtggttgaggct 801 Query: 250 gtggccctcttcaagtcctactttggtggaacttttgatgaagatgc 296 || || || ||||| || || |||||||| ||||||| |||||||| Sbjct: 802 gttgcactattcaaatcttattttggtggttcttttgacgaagatgc 848 Score = 85.7 bits (43), Expect = 2e-13 Identities = 133/163 (81%) Strand = Plus / Plus Query: 431 agccttcggataagccagttccaaatgcgaccctgcaagttactggcgctgttggttgga 490 |||||| |||||| ||||||||||| || || | ||||| || ||||||||||||||| Sbjct: 885 agcctttggataaaccagttccaaacgccacattacaagtcacgggcgctgttggttggc 944 Query: 491 gaagagagggtcttgtgtacaagaagaatgaggttttcttggacattgttgagagcgtaa 550 | || ||||||||||| || |||||||||||||| || |||| || || || || || | Sbjct: 945 gcagggagggtcttgtttataagaagaatgaggtgtttctggatatagtagaaagtgtta 1004 Query: 551 accttcttatgtcttctaaagggagtgttctacgatgtgatgt 593 | || ||||||||||| ||||| ||||| || || |||||||| Sbjct: 1005 atctccttatgtcttcaaaaggtagtgtgctccgttgtgatgt 1047
>dbj|AP004118.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1148_D05 Length = 155146 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Plus Query: 431 agccttcggataagccagttccaaatgcgaccctgcaagttactggcgctgttggttgga 490 ||||||| |||||||| ||||| ||||| || || ||||||||||| ||||||||||||| Sbjct: 498 agccttcagataagcctgttccgaatgccactctacaagttactggtgctgttggttgga 557 Query: 491 gaagagagggtcttgtgtacaagaagaatgaggt 524 |||||||||||||| ||||||||||||| ||||| Sbjct: 558 gaagagagggtcttatgtacaagaagaacgaggt 591 Score = 113 bits (57), Expect = 7e-22 Identities = 84/93 (90%) Strand = Plus / Plus Query: 245 aggcagtggccctcttcaagtcctactttggtggaacttttgatgaagatgctatcagga 304 |||||||||| || |||||||| ||||||||||| |||||||||||||||||||||| | Sbjct: 94 aggcagtggctcttttcaagtcatactttggtggtgcttttgatgaagatgctatcagaa 153 Query: 305 ataactttgtgttaatatacgagcttcttgatg 337 |||||||||| ||||| || ||||||||||||| Sbjct: 154 ataactttgttttaatctatgagcttcttgatg 186 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Plus Query: 340 attatggacttcggttatcctcagaatctctcacctgaaattttgaagttatatataacc 399 ||||||||||||||||| ||||| || |||||||||||||| || || || |||||||| Sbjct: 285 attatggacttcggttaccctcaaaacctctcacctgaaatcttaaaattgtatataact 344 Query: 400 caggaaggcgtacgatcgccattttcctccaag 432 || ||||| || || |||||||||||||||||| Sbjct: 345 caagaaggagttcggtcgccattttcctccaag 377 Score = 79.8 bits (40), Expect = 9e-12 Identities = 49/52 (94%) Strand = Plus / Plus Query: 521 aggttttcttggacattgttgagagcgtaaaccttcttatgtcttctaaagg 572 |||||||||||||||||||||| || ||||| |||||||||||||||||||| Sbjct: 908 aggttttcttggacattgttgaaagtgtaaatcttcttatgtcttctaaagg 959 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 570 agggagtgttctacgatgtgatgtgac 596 ||||||||||||||||||||||||||| Sbjct: 1060 agggagtgttctacgatgtgatgtgac 1086
>emb|CR931738.1| Medicago truncatula chromosome 5 clone mth2-56k10, COMPLETE SEQUENCE Length = 132450 Score = 103 bits (52), Expect = 7e-19 Identities = 148/180 (82%) Strand = Plus / Plus Query: 68 ggggaaatatggttgatgcattcaggatgcacattatgcaaacaaaagagcttggtacat 127 ||||||||||||||||||| || ||| ||| || |||||||| ||||| |||||||| | Sbjct: 30181 ggggaaatatggttgatgcttttcggacgcatataatgcaaacgaaagaacttggtacct 30240 Query: 128 gccctgttcgacaaataggaggctgttccttcctttacatgaggatcagtaatgtttaca 187 | ||||| || || || || || || ||| |||||||||||||||| ||||| || | Sbjct: 30241 gtcctgtgaagcagattggtggatgctctttcttttacatgaggatcagcaatgtctata 30300 Query: 188 ttgtgatcgtggttagcagcaatgctaatgtttcttgtgctttcaagtttgttgtggagg 247 ||||||| || || || | |||||||||||| |||||||||||||||||||||| |||| Sbjct: 30301 ttgtgattgttgtcagtaccaatgctaatgtagcttgtgctttcaagtttgttgtagagg 30360 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 448 gttccaaatgcgaccctgcaagttactggcgctgttggttggagaagagagggtcttgtg 507 |||||||||||||| | |||||||| || |||||||||||| | ||||| || ||||| Sbjct: 33042 gttccaaatgcgacgttacaagttacgggtgctgttggttggcggagagaaggccttgta 33101 Query: 508 tacaagaagaatgaggt 524 ||||| ||||||||||| Sbjct: 33102 tacaaaaagaatgaggt 33118 Score = 40.1 bits (20), Expect = 8.1 Identities = 50/60 (83%) Strand = Plus / Plus Query: 10 tacttcctcaaccttcgcggggacgtcctcatcaatcgcctataccgcgacgatgtcggg 69 |||||| | ||||| || || ||||| ||||||||||| || || || |||||||||||| Sbjct: 29015 tacttcttgaacctccgtggtgacgttctcatcaatcgtctctatcgtgacgatgtcggg 29074
>dbj|AB016882.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MZA15 Length = 79995 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 448 gttccaaatgcgaccctgcaagttactggcgctgttggttggagaagagagggtcttgtg 507 ||||||||||| || | |||||||| || ||||||||||||||||||||||| |||| Sbjct: 3576 gttccaaatgcaacattacaagttacaggtgctgttggttggagaagagagggccttgct 3635 Query: 508 tacaagaagaatgaggt 524 ||||| ||||||||||| Sbjct: 3636 tacaaaaagaatgaggt 3652 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 337 gagattatggacttcggttatcctcagaatctctcacctgaaattttgaagttatatata 396 |||||||||||||| || ||||| || |||||||||||||||||||| || | ||||| Sbjct: 3312 gagattatggactttggctatccacaaaatctctcacctgaaattttaaaactttatatc 3371 Query: 397 acccaggaaggcgtacgatcgccattttc 425 || |||||||| ||||| || |||||||| Sbjct: 3372 actcaggaaggtgtacggtcaccattttc 3400 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 259 ttcaagtcctactttggtggaacttttgatgaagatgctatcaggaataactttgt 314 ||||| || |||||||||||| ||||||||||||| ||||| || ||||||||||| Sbjct: 3110 ttcaaatcatactttggtggagcttttgatgaagacgctattagaaataactttgt 3165 Score = 48.1 bits (24), Expect = 0.033 Identities = 63/76 (82%) Strand = Plus / Plus Query: 172 atcagtaatgtttacattgtgatcgtggttagcagcaatgctaatgtttcttgtgctttc 231 ||||| ||||| ||||| || || || || || ||||||||||||||| |||||| ||| Sbjct: 2908 atcagcaatgtctacatcgtcattgttgtcagtagcaatgctaatgttgcttgtggattc 2967 Query: 232 aagtttgttgtggagg 247 || |||||||| |||| Sbjct: 2968 aaatttgttgttgagg 2983
>gb|AF544037.1| Arabidopsis thaliana polymorphic DNA fragment T80II60 Length = 521 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 442 aagccagttccaaatgcgaccctgcaagttactggcgctgttggttggagaagagagggt 501 ||||| ||||||||||| || | |||||||| || ||||||||||||||||||||||| Sbjct: 186 aagcctgttccaaatgcaacattacaagttacgggtgctgttggttggagaagagagggc 245 Query: 502 cttgtgtacaagaagaatgaggt 524 |||| || || ||||||||||| Sbjct: 246 cttgcttataaaaagaatgaggt 268
>ref|NM_104761.3| Arabidopsis thaliana unknown protein AT1G60780 mRNA, complete cds Length = 1897 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 507 gtacaagaagaatgaggttttcttgga 533 ||||||||||||||| ||||||||||| Sbjct: 775 gtacaagaagaatgaagttttcttgga 801 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 305 ataactttgtgttaatatacgagcttcttgatgagattatggacttcggttatcctcag 363 ||||||||||| || | || ||||| ||||| ||||| |||||||| ||||| |||||| Sbjct: 597 ataactttgtggtagtgtatgagctacttgacgagatgatggactttggttaccctcag 655
>gb|AY099652.1| Arabidopsis thaliana clathrin adaptor medium chain protein MU1B, putative (At1g60780) mRNA, complete cds Length = 1690 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 507 gtacaagaagaatgaggttttcttgga 533 ||||||||||||||| ||||||||||| Sbjct: 694 gtacaagaagaatgaagttttcttgga 720 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 305 ataactttgtgttaatatacgagcttcttgatgagattatggacttcggttatcctcag 363 ||||||||||| || | || ||||| ||||| ||||| |||||||| ||||| |||||| Sbjct: 516 ataactttgtggtagtgtatgagctacttgacgagatgatggactttggttaccctcag 574
>gb|BT002144.1| Arabidopsis thaliana clathrin adaptor medium chain protein MU1B, putative (At1g60780) mRNA, complete cds Length = 1360 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 507 gtacaagaagaatgaggttttcttgga 533 ||||||||||||||| ||||||||||| Sbjct: 501 gtacaagaagaatgaagttttcttgga 527 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 305 ataactttgtgttaatatacgagcttcttgatgagattatggacttcggttatcctcag 363 ||||||||||| || | || ||||| ||||| ||||| |||||||| ||||| |||||| Sbjct: 323 ataactttgtggtagtgtatgagctacttgacgagatgatggactttggttaccctcag 381
>ref|NM_212577.1| Danio rerio zgc:85653 (zgc:85653), mRNA Length = 2045 Score = 44.1 bits (22), Expect = 0.52 Identities = 46/54 (85%) Strand = Plus / Plus Query: 297 tatcaggaataactttgtgttaatatacgagcttcttgatgagattatggactt 350 ||||| ||||||||||||| | || |||||| | || ||||||||| ||||||| Sbjct: 356 tatcaagaataactttgtgcttatctacgagttgctggatgagattctggactt 409
>gb|BC067560.1| Danio rerio zgc:85653, mRNA (cDNA clone MGC:85653 IMAGE:6806683), complete cds Length = 2045 Score = 44.1 bits (22), Expect = 0.52 Identities = 46/54 (85%) Strand = Plus / Plus Query: 297 tatcaggaataactttgtgttaatatacgagcttcttgatgagattatggactt 350 ||||| ||||||||||||| | || |||||| | || ||||||||| ||||||| Sbjct: 356 tatcaagaataactttgtgcttatctacgagttgctggatgagattctggactt 409
>emb|CR933820.6| Zebrafish DNA sequence from clone DKEY-183J2 in linkage group 11, complete sequence Length = 230267 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 375 tgaaattttgaagttatatata 396 |||||||||||||||||||||| Sbjct: 111732 tgaaattttgaagttatatata 111753
>gb|BC056352.1| Mus musculus adaptor protein complex AP-2, mu1, mRNA (cDNA clone MGC:73445 IMAGE:6807694), complete cds Length = 1934 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 310 tttgtgttaatatacgagcttcttgatgagattatggactt 350 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 448 tttgtgctcatatacgagctgctggatgagattctggactt 488
>ref|NM_009679.1| Mus musculus adaptor protein complex AP-2, mu1 (Ap2m1), mRNA Length = 2066 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 310 tttgtgttaatatacgagcttcttgatgagattatggactt 350 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 454 tttgtgctcatatacgagctgctggatgagattctggactt 494
>gb|AC121905.3| Mus musculus BAC clone RP24-176A1 from chromosome 3, complete sequence Length = 178517 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 366 tctctcacctgaaattttgaa 386 ||||||||||||||||||||| Sbjct: 12061 tctctcacctgaaattttgaa 12081
>gb|AC161359.4| Mus musculus chromosome 3, clone RP24-244A19, complete sequence Length = 191289 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 366 tctctcacctgaaattttgaa 386 ||||||||||||||||||||| Sbjct: 156058 tctctcacctgaaattttgaa 156078 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 ctctcacctgaaattttgaa 386 |||||||||||||||||||| Sbjct: 32047 ctctcacctgaaattttgaa 32066
>gb|AC148291.22| Medicago truncatula clone mth2-14n3, complete sequence Length = 138853 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 gcagcaatgctaatgtttctt 223 ||||||||||||||||||||| Sbjct: 11261 gcagcaatgctaatgtttctt 11281
>emb|AL157933.19| Human DNA sequence from clone RP11-395L12 on chromosome Xq21.1-21.33, complete sequence Length = 48768 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 500 gtcttgtgtacaagaagaatgaggt 524 ||||||||| ||||||||||||||| Sbjct: 14013 gtcttgtgtccaagaagaatgaggt 14037
>emb|AL035465.4|HS197K23 Human DNA sequence from clone RP1-197K23 on chromosome 6q22.2-23.3 Contains part of the PTPRK gene for protein tyrosine phosphatase receptor type K (R-PTP-KAPPA) and the 5' end of a novel gene, complete sequence Length = 48634 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 aagatgctatcaggaataact 310 ||||||||||||||||||||| Sbjct: 26003 aagatgctatcaggaataact 26023
>gb|BT009619.1| Triticum aestivum clone wre1n.pk0123.c3:fis, full insert mRNA sequence Length = 1508 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 331 cttgatgagattatggacttcggttatcc 359 ||||||||||| ||||||||||| ||||| Sbjct: 165 cttgatgagatgatggacttcgggtatcc 193 Score = 40.1 bits (20), Expect = 8.1 Identities = 44/52 (84%) Strand = Plus / Plus Query: 507 gtacaagaagaatgaggttttcttggacattgttgagagcgtaaaccttctt 558 ||||||||||||||| || |||||||| | |||||||| || ||| ||||| Sbjct: 317 gtacaagaagaatgaagtgttcttggatgtggttgagagtgtcaacattctt 368
>gb|AC160758.3| Mus musculus chromosome 3, clone RP24-215I16, complete sequence Length = 42147 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 366 tctctcacctgaaattttgaa 386 ||||||||||||||||||||| Sbjct: 19897 tctctcacctgaaattttgaa 19877
>gb|BC089342.1| Mus musculus adaptor protein complex AP-2, mu1, mRNA (cDNA clone MGC:102136 IMAGE:30538471), complete cds Length = 1915 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 310 tttgtgttaatatacgagcttcttgatgagattatggactt 350 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 441 tttgtgctcatatacgagctgctggatgagattctggactt 481
>dbj|AK141862.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130035H06 product:adaptor protein complex AP-2, mu1, full insert sequence Length = 2869 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 310 tttgtgttaatatacgagcttcttgatgagattatggactt 350 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 409 tttgtgctcatatacgagctgctggatgagattctggactt 449
>dbj|AK143586.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F420010K16 product:adaptor protein complex AP-2, mu1, full insert sequence Length = 1811 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 310 tttgtgttaatatacgagcttcttgatgagattatggactt 350 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 424 tttgtgctcatatacgagctgctggatgagattctggactt 464
>dbj|AK146517.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920019I09 product:adaptor protein complex AP-2, mu1, full insert sequence Length = 2080 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 310 tttgtgttaatatacgagcttcttgatgagattatggactt 350 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 478 tttgtgctcatatacgagctgctggatgagattctggactt 518
>dbj|AK150358.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830005F01 product:adaptor protein complex AP-2, mu1, full insert sequence Length = 1098 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 310 tttgtgttaatatacgagcttcttgatgagattatggactt 350 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 445 tttgtgctcatatacgagctgctggatgagattctggactt 485
>dbj|AK168414.1| Mus musculus 17 days embryo stomach cDNA, RIKEN full-length enriched library, clone:I920012N21 product:adaptor protein complex AP-2, mu1, full insert sequence Length = 1911 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 310 tttgtgttaatatacgagcttcttgatgagattatggactt 350 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 455 tttgtgctcatatacgagctgctggatgagattctggactt 495
>dbj|AK159534.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420023G04 product:adaptor protein complex AP-2, mu1, full insert sequence Length = 1906 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 310 tttgtgttaatatacgagcttcttgatgagattatggactt 350 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 456 tttgtgctcatatacgagctgctggatgagattctggactt 496
>gb|AC024166.3|AC024166 Homo sapiens chromosome 3 clone RP11-429F16 map 3p, complete sequence Length = 174868 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 500 gtcttgtgtacaagaagaatgaggt 524 ||||||||| ||||||||||||||| Sbjct: 7420 gtcttgtgtccaagaagaatgaggt 7396
>dbj|AK172889.1| Mus musculus mRNA for mKIAA0109 protein Length = 2007 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 310 tttgtgttaatatacgagcttcttgatgagattatggactt 350 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 409 tttgtgctcatatacgagctgctggatgagattctggactt 449
>gb|AC004765.2| Homo sapiens 12 BAC RPCI11-388A16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 150812 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 aaattttgaagttatatataa 397 ||||||||||||||||||||| Sbjct: 42030 aaattttgaagttatatataa 42050
>emb|BX546465.7| Mouse DNA sequence from clone RP23-167N13 on chromosome 2, complete sequence Length = 81064 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 310 tttgtgttaatatacgagcttcttgatgagattatggactt 350 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 23870 tttgtgctcatatacgagctgctggatgagattctggactt 23910
>dbj|BS000165.1| Pan troglodytes chromosome 22 clone:PTB-057B23, map 22, complete sequences Length = 142215 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 556 cttatgtcttctaaagggagt 576 ||||||||||||||||||||| Sbjct: 85596 cttatgtcttctaaagggagt 85616
>gb|AC172623.3| Mus musculus chromosome 8, clone RP23-478A9, complete sequence Length = 182316 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 310 tttgtgttaatatacgagcttcttgatgagattatggactt 350 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 63881 tttgtgctcatatacgagctgctggatgagattctggactt 63841
>gb|U27106.1|MMU27106 Mus musculus clathrin-associated AP-2 complex AP50 subunit mRNA, complete cds Length = 2066 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 310 tttgtgttaatatacgagcttcttgatgagattatggactt 350 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 454 tttgtgctcatatacgagctgctggatgagattctggactt 494
>gb|BC094510.1| Mus musculus adaptor protein complex AP-2, mu1, mRNA (cDNA clone MGC:106373 IMAGE:6313261), complete cds Length = 1971 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 310 tttgtgttaatatacgagcttcttgatgagattatggactt 350 |||||| | ||||||||||| || ||||||||| ||||||| Sbjct: 438 tttgtgctcatatacgagctgctggatgagattctggactt 478
>gb|AC066580.4| Homo sapiens chromosome 3 clone RP11-109J15 map 3p, complete sequence Length = 149252 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 500 gtcttgtgtacaagaagaatgaggt 524 ||||||||| ||||||||||||||| Sbjct: 118475 gtcttgtgtccaagaagaatgaggt 118451
>ref|NM_192230.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1290 Score = 40.1 bits (20), Expect = 8.1 Identities = 44/52 (84%) Strand = Plus / Plus Query: 507 gtacaagaagaatgaggttttcttggacattgttgagagcgtaaaccttctt 558 ||||||||||||||| || |||||||| |||| ||||| || ||| ||||| Sbjct: 504 gtacaagaagaatgaagtgttcttggatgttgtggagagtgttaacattctt 555
>gb|AF106564.3| Homo sapiens chromosome 8 clone GS1-72M22 map p21.2, complete sequence Length = 143212 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 501 tcttgtgtacaagaagaatgaggt 524 ||||||||||| |||||||||||| Sbjct: 128721 tcttgtgtacaggaagaatgaggt 128698
>emb|CT010587.5| Mouse DNA sequence from clone RP23-307A6 on chromosome 17, complete sequence Length = 173949 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 gcacattatgcaaacaaaag 115 |||||||||||||||||||| Sbjct: 67582 gcacattatgcaaacaaaag 67601
>gb|AF412336.1| Branchiostoma floridae amphiCASP-6 mRNA, complete cds Length = 2451 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 agcttcttgatgagattatg 345 |||||||||||||||||||| Sbjct: 2238 agcttcttgatgagattatg 2257
>ref|XM_651168.1| Entamoeba histolytica HM-1:IMSS GS1 protein (15.t00060) partial mRNA Length = 690 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 cttcctttacatgaggatca 175 |||||||||||||||||||| Sbjct: 445 cttcctttacatgaggatca 426
>gb|AC146274.2| Pan troglodytes BAC clone RP43-29I24 from 7, complete sequence Length = 51473 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 acttttgatgaagatgctat 299 |||||||||||||||||||| Sbjct: 19850 acttttgatgaagatgctat 19869
>gb|AC004942.1| Homo sapiens PAC clone RP5-981B16 from 7, complete sequence Length = 76079 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 acttttgatgaagatgctat 299 |||||||||||||||||||| Sbjct: 25134 acttttgatgaagatgctat 25153
>emb|AJ011849.1|BSU011483 Bacillus subtilis fenD gene Length = 7774 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 tgctaatgtttcttgtgctttcaa 233 ||||||||||||||| |||||||| Sbjct: 4951 tgctaatgtttcttgcgctttcaa 4928
>emb|AL359914.14| Human DNA sequence from clone RP11-637B23 on chromosome X Contains a H3 histone, family 3B (H3F3B) pseudogene, the BMP15 gene for bone morphogenetic protein 15, and a high-mobility group box 1 (HMGB1) pseudogene, complete sequence Length = 125495 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 500 gtcttgtgtacaagaagaatgagg 523 ||||||||| |||||||||||||| Sbjct: 38555 gtcttgtgtccaagaagaatgagg 38578
>gb|AC117452.2| Homo sapiens 3 BAC RP11-341J3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 193285 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 aattttgaagttatatataa 397 |||||||||||||||||||| Sbjct: 171721 aattttgaagttatatataa 171740
>gb|DQ167724.1| Drosophila orena putative clathrin-associated protein (AP-50) gene, complete cds Length = 1813 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 298 atcaggaataactttgtgttaatatacgagcttcttgatgagat 341 |||| ||||||||| ||| | || ||||||||||| |||||||| Sbjct: 704 atcaagaataacttcgtgctcatctacgagcttctggatgagat 747
>gb|DQ167723.1| Drosophila erecta putative clathrin-associated protein (AP-50) gene, complete cds Length = 1513 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 298 atcaggaataactttgtgttaatatacgagcttcttgatgagat 341 |||| ||||||||| ||| | || ||||||||||| |||||||| Sbjct: 399 atcaagaataacttcgtgctcatctacgagcttctggatgagat 442
>gb|AC119729.5| Homo sapiens 3 BAC RP11-36I16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 125847 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 aattttgaagttatatataa 397 |||||||||||||||||||| Sbjct: 30799 aattttgaagttatatataa 30818
>gb|AC105359.3| Homo sapiens chromosome 8, clone XX-224N20, complete sequence Length = 122274 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 501 tcttgtgtacaagaagaatgaggt 524 ||||||||||| |||||||||||| Sbjct: 76266 tcttgtgtacaggaagaatgaggt 76243
>gb|AC021000.9| Homo sapiens chromosome 8, clone RP11-381I2, complete sequence Length = 192592 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 501 tcttgtgtacaagaagaatgaggt 524 ||||||||||| |||||||||||| Sbjct: 182643 tcttgtgtacaggaagaatgaggt 182620
>emb|BX897661.7| Zebrafish DNA sequence from clone DKEY-261N7 in linkage group 7, complete sequence Length = 157216 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 aatgctaatgtttcttgtgc 227 |||||||||||||||||||| Sbjct: 108024 aatgctaatgtttcttgtgc 108043
>emb|BX088559.18| Zebrafish DNA sequence from clone DKEY-238P16 in linkage group 7, complete sequence Length = 159610 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 aatgctaatgtttcttgtgc 227 |||||||||||||||||||| Sbjct: 121521 aatgctaatgtttcttgtgc 121540
>gb|AC011372.7| Homo sapiens chromosome 5 clone CTB-108B20, complete sequence Length = 183330 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 488 ggagaagagagggtcttgtg 507 |||||||||||||||||||| Sbjct: 98921 ggagaagagagggtcttgtg 98902
>gb|AF255311.1|AF255311 Drosophila yakuba clathrin adaptor protein AP50 (AP-50) gene, partial cds Length = 1399 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 298 atcaggaataactttgtgttaatatacgagcttcttgatgagat 341 |||| ||||||||||||| | || |||||||| || |||||||| Sbjct: 360 atcaagaataactttgtgctcatctacgagctgctggatgagat 403
>gb|AC000055.1|HSAC000055 Human PAC clone DJ073F11 from Xq23, complete sequence Length = 93578 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 tggaggcagtggccctcttc 261 |||||||||||||||||||| Sbjct: 85799 tggaggcagtggccctcttc 85818
>dbj|AK065538.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030K02, full insert sequence Length = 1892 Score = 40.1 bits (20), Expect = 8.1 Identities = 44/52 (84%) Strand = Plus / Plus Query: 507 gtacaagaagaatgaggttttcttggacattgttgagagcgtaaaccttctt 558 ||||||||||||||| || |||||||| |||| ||||| || ||| ||||| Sbjct: 747 gtacaagaagaatgaagtgttcttggatgttgtggagagtgttaacattctt 798
>gb|AC154790.2| Mus musculus BAC clone RP24-481A4 from 17, complete sequence Length = 194675 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 gcacattatgcaaacaaaag 115 |||||||||||||||||||| Sbjct: 38631 gcacattatgcaaacaaaag 38650
>emb|BX088722.8| Zebrafish DNA sequence from clone CH211-253P18 in linkage group 20, complete sequence Length = 195359 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 aatgctaatgtttcttgtgc 227 |||||||||||||||||||| Sbjct: 12892 aatgctaatgtttcttgtgc 12911
>dbj|AK060762.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-A04, full insert sequence Length = 1867 Score = 40.1 bits (20), Expect = 8.1 Identities = 44/52 (84%) Strand = Plus / Plus Query: 507 gtacaagaagaatgaggttttcttggacattgttgagagcgtaaaccttctt 558 ||||||||||||||| || |||||||| |||| ||||| || ||| ||||| Sbjct: 737 gtacaagaagaatgaagtgttcttggatgttgtggagagtgttaacattctt 788
>gb|AC133209.4| Mus musculus BAC clone RP23-21E5 from chromosome 3, complete sequence Length = 164837 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 gaaatatggttgatgcattcagga 94 ||||||||||| |||||||||||| Sbjct: 67408 gaaatatggttaatgcattcagga 67431
>gb|AC173211.3| Gallus gallus BAC clone CH261-2F13 from chromosome ul, complete sequence Length = 204791 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 tggagaagagagggtcttgt 506 |||||||||||||||||||| Sbjct: 149418 tggagaagagagggtcttgt 149399
>gb|AC155272.3| Mus musculus BAC clone RP23-79N13 from chromosome 13, complete sequence Length = 213306 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 372 acctgaaattttgaagttatatat 395 ||||||||||||||| |||||||| Sbjct: 62267 acctgaaattttgaaattatatat 62244
>emb|AL122023.3|CNS01DSX Human chromosome 14 DNA sequence BAC R-120E11 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 171375 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 tgcattcaggatgcacatta 103 |||||||||||||||||||| Sbjct: 157152 tgcattcaggatgcacatta 157171
>gb|AC152069.4| Mus musculus chromosome 3, clone RP24-403D5, complete sequence Length = 185511 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 ctctcacctgaaattttgaa 386 |||||||||||||||||||| Sbjct: 40053 ctctcacctgaaattttgaa 40034
>emb|CT033752.6| Mouse DNA sequence from clone RP23-140I20 on chromosome 17, complete sequence Length = 216455 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 gcacattatgcaaacaaaag 115 |||||||||||||||||||| Sbjct: 9244 gcacattatgcaaacaaaag 9263 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,478,360 Number of Sequences: 3902068 Number of extensions: 5478360 Number of successful extensions: 106514 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 78 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 106310 Number of HSP's gapped (non-prelim): 195 length of query: 597 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 574 effective length of database: 17,143,297,704 effective search space: 9840252882096 effective search space used: 9840252882096 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)