ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags19l13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0065A15, complete sequence Length = 168806 Score = 119 bits (60), Expect = 1e-23 Identities = 93/104 (89%) Strand = Plus / Plus Query: 418 cttggtcagattcttggttatggagctttggcaagattagtgaagatgggttattccact 477 ||||| ||||| || ||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 135165 cttggccagatcctaggttatggagctttggcaagattagtgaagatgggctatgcaact 135224 Query: 478 tcggcaaaagaagctgcaaaggcgatgtatgctatatcggcttt 521 || ||| |||||||| |||||||| ||||||||||||| ||||| Sbjct: 135225 tctgcagaagaagctacaaaggcgctgtatgctatatccgcttt 135268
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 119 bits (60), Expect = 1e-23 Identities = 93/104 (89%) Strand = Plus / Plus Query: 418 cttggtcagattcttggttatggagctttggcaagattagtgaagatgggttattccact 477 ||||| ||||| || ||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 19652090 cttggccagatcctaggttatggagctttggcaagattagtgaagatgggctatgcaact 19652149 Query: 478 tcggcaaaagaagctgcaaaggcgatgtatgctatatcggcttt 521 || ||| |||||||| |||||||| ||||||||||||| ||||| Sbjct: 19652150 tctgcagaagaagctacaaaggcgctgtatgctatatccgcttt 19652193
>dbj|AP006752.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1399_D07, complete sequence Length = 65000 Score = 119 bits (60), Expect = 1e-23 Identities = 93/104 (89%) Strand = Plus / Plus Query: 418 cttggtcagattcttggttatggagctttggcaagattagtgaagatgggttattccact 477 ||||| ||||| || ||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 61572 cttggccagatcctaggttatggagctttggcaagattagtgaagatgggctatgcaact 61631 Query: 478 tcggcaaaagaagctgcaaaggcgatgtatgctatatcggcttt 521 || ||| |||||||| |||||||| ||||||||||||| ||||| Sbjct: 61632 tctgcagaagaagctacaaaggcgctgtatgctatatccgcttt 61675
>dbj|AK059516.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-B12, full insert sequence Length = 1586 Score = 117 bits (59), Expect = 5e-23 Identities = 89/99 (89%) Strand = Plus / Plus Query: 423 tcagattcttggttatggagctttggcaagattagtgaagatgggttattccacttcggc 482 |||||| || ||||||||||||||||||||||||||||||||||| ||| | ||||| || Sbjct: 719 tcagatcctaggttatggagctttggcaagattagtgaagatgggctatgcaacttctgc 778 Query: 483 aaaagaagctgcaaaggcgatgtatgctatatcggcttt 521 | |||||||| |||||||| ||||||||||||| ||||| Sbjct: 779 agaagaagctacaaaggcgctgtatgctatatccgcttt 817
>emb|AL691483.10| Human DNA sequence from clone RP11-484M14 on chromosome 1, complete sequence Length = 90642 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 363 atttgttataatcattttttgt 384 |||||||||||||||||||||| Sbjct: 41409 atttgttataatcattttttgt 41388
>gb|U88172.1| Caenorhabditis elegans cosmid ZK354, complete sequence Length = 24049 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 ttttcttttcaaactgattgt 289 ||||||||||||||||||||| Sbjct: 15148 ttttcttttcaaactgattgt 15168
>emb|Z82277.1|CELLC1 Caenorhabditis elegans Cosmid LLC1, complete sequence Length = 35920 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 aaactgattgtcaactgtgca 299 ||||||||||||||||||||| Sbjct: 16324 aaactgattgtcaactgtgca 16344
>gb|AF043692.1| Caenorhabditis elegans cosmid C17F3, complete sequence Length = 18873 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 ttttcttttcaaactgattgt 289 ||||||||||||||||||||| Sbjct: 13301 ttttcttttcaaactgattgt 13321
>emb|AL035477.6|PFMAL4P4 Plasmodium falciparum MAL4P4 Length = 272698 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 364 tttgttataatcattttttgttcta 388 ||||||||||||||||||| ||||| Sbjct: 82156 tttgttataatcatttttttttcta 82180
>gb|AC104799.4| Homo sapiens BAC clone RP11-345F13 from 2, complete sequence Length = 159933 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 251 ttgtagtggtttcttctattt 271 ||||||||||||||||||||| Sbjct: 31259 ttgtagtggtttcttctattt 31279
>gb|AC125435.8| Homo sapiens chromosome 15, clone CTD-2235H24, complete sequence Length = 124255 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 362 tatttgttataatcatttttt 382 ||||||||||||||||||||| Sbjct: 40651 tatttgttataatcatttttt 40671
>gb|AC017006.4| Homo sapiens BAC clone RP11-110G2 from 2, complete sequence Length = 191953 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 362 tatttgttataatcattttttgttc 386 ||||||||||| ||||||||||||| Sbjct: 88410 tatttgttatattcattttttgttc 88434
>emb|AL010273.1|PFSC04088 Plasmodium falciparum DNA *** SEQUENCING IN PROGRESS *** from contig 4-88, complete sequence Length = 21202 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 364 tttgttataatcattttttgttcta 388 ||||||||||||||||||| ||||| Sbjct: 12636 tttgttataatcatttttttttcta 12660
>gb|BC103651.1| Rattus norvegicus similar to BMP-2 inducible kinase, mRNA (cDNA clone IMAGE:7316892), partial cds Length = 2365 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 ctgttgttgaagtatttgtt 369 |||||||||||||||||||| Sbjct: 841 ctgttgttgaagtatttgtt 822
>gb|AC116839.8| Mus musculus chromosome 8, clone RP24-390L13, complete sequence Length = 142874 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 tctttcatttcaccattgct 244 |||||||||||||||||||| Sbjct: 61271 tctttcatttcaccattgct 61290
>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15, complete sequence Length = 149035 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ttcttctattttcttttcaaactg 284 |||||||||||| ||||||||||| Sbjct: 32886 ttcttctatttttttttcaaactg 32909
>gb|AY815984.1| Schistosoma japonicum SJCHGC06731 protein mRNA, complete cds Length = 1456 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tgaaaatgatgtttatatat 225 |||||||||||||||||||| Sbjct: 1189 tgaaaatgatgtttatatat 1208
>gb|AC114011.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078f20, complete sequence Length = 151042 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ttcttctattttcttttcaaactg 284 |||||||||||| ||||||||||| Sbjct: 132711 ttcttctatttttttttcaaactg 132734
>gb|AC105297.35| Mus musculus strain C57BL/6J clone rp23-14k19 map 17, complete sequence Length = 236275 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 atgcttgaaaatgatgttta 220 |||||||||||||||||||| Sbjct: 57102 atgcttgaaaatgatgttta 57083
>gb|AC134453.4| Mus musculus BAC clone RP24-263P23 from chromosome 15, complete sequence Length = 131905 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tttcttctattttcttttca 279 |||||||||||||||||||| Sbjct: 26144 tttcttctattttcttttca 26125
>gb|AC126611.3| Mus musculus BAC clone RP23-316N22 from chromosome 14, complete sequence Length = 177469 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 ccaatgaatgctactgtaaa 176 |||||||||||||||||||| Sbjct: 92698 ccaatgaatgctactgtaaa 92717
>emb|CR545462.25| Zebrafish DNA sequence from clone DKEYP-88F5 in linkage group 20, complete sequence Length = 199482 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 aacgtaaatggtgaggagga 551 |||||||||||||||||||| Sbjct: 156543 aacgtaaatggtgaggagga 156562
>gb|AC125464.4| Mus musculus BAC clone RP23-113C9 from 14, complete sequence Length = 203804 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 gtttcttctattttcttttc 278 |||||||||||||||||||| Sbjct: 120154 gtttcttctattttcttttc 120173
>ref|XM_759832.1| Theileria parva strain Muguga DNA-directed RNA polymerase II subunit Rpb4 (TP02_0359) partial mRNA Length = 315 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 gcagatttggggagtaaatt 105 |||||||||||||||||||| Sbjct: 215 gcagatttggggagtaaatt 196
>emb|AL445704.18| Human DNA sequence from clone RP11-99F4 on chromosome 1 Contains the 5' end of a novel gene (FLJ40773) and a CpG island, complete sequence Length = 163621 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 tttaatcagaaataacgtaa 538 |||||||||||||||||||| Sbjct: 53310 tttaatcagaaataacgtaa 53291
>emb|AL356154.13| Human DNA sequence from clone RP11-102H24 on chromosome 10 Contains a replication protein A2 32kDa (RPA2) pseudogene, complete sequence Length = 157722 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 taatcattttttgttctagc 390 |||||||||||||||||||| Sbjct: 84607 taatcattttttgttctagc 84626
>emb|AL022323.7|HS243E7 Human DNA sequence from clone CTA-243E7 on chromosome 22q12.1, complete sequence Length = 183113 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 tttatatatctttcatttca 236 |||||||||||||||||||| Sbjct: 165370 tttatatatctttcatttca 165389
>emb|AL669869.10| Mouse DNA sequence from clone RP23-198E14 on chromosome 11 Contains the 3' end of the Mgl2 gene for macrophage galactose N-acetyl-galactosamine specific lectin 2, the Mgl1 gene for macrophage galactose N-acetyl-galactosamine specific lectin 1, the gene for a novel RNA polymerase Rpb1 C-terminal repeat domain containing protein, three novel genes, the Bcl6b gene for B-cell CLL/lymphoma 6 member B, the Alox12 gene for arachidonate 12-lipoxygenase and four CpG islands, complete sequence Length = 174390 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 tcttctattttcttttcaaa 281 |||||||||||||||||||| Sbjct: 105816 tcttctattttcttttcaaa 105797
>emb|AL391034.1|SPBC800 S.pombe chromosome II cosmid SPU41410 Length = 30100 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tgtatgctatatcggcttta 522 |||||||||||||||||||| Sbjct: 18469 tgtatgctatatcggcttta 18450
>emb|AJ315378.1|ECA315378 Equus caballus CRISP1 gene for cystein-rich secretory protein 1 and PGK2 gene for testis-specific phosphoglycerate kinase Length = 90631 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 aatttgtctctttaacttca 194 |||||||||||||||||||| Sbjct: 65467 aatttgtctctttaacttca 65486
>emb|BX936305.18| Zebrafish DNA sequence from clone CH211-51N3 in linkage group 13, complete sequence Length = 150383 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 373 atcattttttgttctagccatgtaacat 400 |||||||||||||||| |||| |||||| Sbjct: 26093 atcattttttgttctatccatttaacat 26120
>emb|AL669814.16| Mouse DNA sequence from clone RP23-431J18 on chromosome 11 Contains the 5' end of the Ranbp17 gene for RAN binding protein 17, the Gabrp gene for gamma-aminobutyric acid (GABA-A) receptor, pi, the 3' end of the Kcnip1 gene for Kv channel-interacting protein 1 and a CpG island, complete sequence Length = 198320 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 atttgttataatcatttttt 382 |||||||||||||||||||| Sbjct: 2422 atttgttataatcatttttt 2403
>emb|BX324134.11| Zebrafish DNA sequence from clone DKEY-103K8 in linkage group 6, complete sequence Length = 219514 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 ttgaaaatgatgtttatatatctt 228 |||||| ||||||||||||||||| Sbjct: 177389 ttgaaattgatgtttatatatctt 177412
>emb|CR933731.5| Mouse DNA sequence from clone DN-160I24 on chromosome 11, complete sequence Length = 212982 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 tcttctattttcttttcaaa 281 |||||||||||||||||||| Sbjct: 85841 tcttctattttcttttcaaa 85822
>emb|BX914217.19| Zebrafish DNA sequence from clone DKEY-175H14 in linkage group 18, complete sequence Length = 133981 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 373 atcattttttgttctagccatgtaacat 400 |||||||||||||||| |||| |||||| Sbjct: 111002 atcattttttgttctatccatttaacat 110975
>gb|AC018728.6| Homo sapiens chromosome 7 clone RP11-206N24, complete sequence Length = 181935 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 tttcttctattttcttttcaaact 283 |||||||||||||| ||||||||| Sbjct: 32373 tttcttctattttcatttcaaact 32350
>gb|AC146694.12| Pan troglodytes clone rp43-178l17, complete sequence Length = 229508 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 tttatatatctttcatttca 236 |||||||||||||||||||| Sbjct: 63389 tttatatatctttcatttca 63408
>gb|AC011128.7| Homo sapiens chromosome 8, clone RP11-119N19, complete sequence Length = 183978 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 tgttctagccatgtaacatgtgct 405 ||||| |||||||||||||||||| Sbjct: 108448 tgttccagccatgtaacatgtgct 108471
>gb|AC022929.6| Homo sapiens, clone RP11-326N17, complete sequence Length = 165328 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 576 aatgctgtagcacatcttgggaag 599 |||||| ||||||||||||||||| Sbjct: 21146 aatgctctagcacatcttgggaag 21169
>gb|AC092800.2| Homo sapiens chromosome 1 clone RP11-25B7, complete sequence Length = 169405 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 tttcttctattttcttttca 279 |||||||||||||||||||| Sbjct: 133811 tttcttctattttcttttca 133830
>gb|AC161052.2| Mus musculus BAC clone RP23-393J15 from chromosome 12, complete sequence Length = 201284 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 536 taaatggtgaggaggaattc 555 |||||||||||||||||||| Sbjct: 79426 taaatggtgaggaggaattc 79407
>ref|XM_626295.1| Cryptosporidium parvum Iowa II nucleotide-sugar transporter, UDP N-acetylglucosamine-like, signal peptide, 9 or more transmembrane domains (cgd2_590), partial mRNA Length = 1353 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ttcattattaatagtattat 85 |||||||||||||||||||| Sbjct: 222 ttcattattaatagtattat 241
>ref|NM_001021018.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC800.14c), partial mRNA Length = 483 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 tgtatgctatatcggcttta 522 |||||||||||||||||||| Sbjct: 251 tgtatgctatatcggcttta 270
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 tcggcaaaagaagctgcaaa 497 |||||||||||||||||||| Sbjct: 3579077 tcggcaaaagaagctgcaaa 3579096
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ttcttctattttcttttcaaactg 284 |||||||||||| ||||||||||| Sbjct: 16392276 ttcttctatttttttttcaaactg 16392299
>gb|AC093307.5| Homo sapiens chromosome 5 clone RP11-810C16, complete sequence Length = 176199 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 tggtttcttctattttcttt 276 |||||||||||||||||||| Sbjct: 171711 tggtttcttctattttcttt 171692
>gb|AC027334.5| Homo sapiens chromosome 5 clone CTD-2195M18, complete sequence Length = 101996 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 tggtttcttctattttcttt 276 |||||||||||||||||||| Sbjct: 2606 tggtttcttctattttcttt 2587
>gb|AC009401.3|AC009401 Homo sapiens PAC clone RP4-603O16 from 7q31-q35, complete sequence Length = 122079 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 tttcttctattttcttttcaaact 283 |||||||||||||| ||||||||| Sbjct: 83520 tttcttctattttcatttcaaact 83497
>gb|AC078842.2|AC078842 Homo sapiens chromosome 7 clone RP11-102G17, complete sequence Length = 173844 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 260 tttcttctattttcttttcaaact 283 |||||||||||||| ||||||||| Sbjct: 101395 tttcttctattttcatttcaaact 101418
>gb|AE014845.1| Plasmodium falciparum 3D7 chromosome 12, section 2 of 9 of the complete sequence Length = 250531 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcttcattattaatagtatt 83 |||||||||||||||||||| Sbjct: 126641 tcttcattattaatagtatt 126622
>ref|XM_573559.1| PREDICTED: Rattus norvegicus similar to BMP-2 inducible kinase (LOC498333), mRNA Length = 2073 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 ctgttgttgaagtatttgtt 369 |||||||||||||||||||| Sbjct: 46 ctgttgttgaagtatttgtt 27
>dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisum) genomic DNA, complete sequence Length = 640681 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 ctcttcattattaatagtattatg 86 |||||||||||||||| ||||||| Sbjct: 262588 ctcttcattattaatactattatg 262565
>emb|AJ251973.1|HSA251973 Homo sapiens partial steerin-1 gene Length = 200033 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tttcttctattttcttttca 279 |||||||||||||||||||| Sbjct: 99587 tttcttctattttcttttca 99568
>emb|CT025579.12| Mouse DNA sequence from clone RP24-189A10 on chromosome 14, complete sequence Length = 173961 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 tcttctattttcttttcaaa 281 |||||||||||||||||||| Sbjct: 150478 tcttctattttcttttcaaa 150497
>emb|AL157996.8|CNS01RGH Human chromosome 14 DNA sequence BAC C-2525P14 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 209242 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 cattattaatagtattatgcagat 91 ||||||||||| |||||||||||| Sbjct: 112817 cattattaatattattatgcagat 112840
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 tcggcaaaagaagctgcaaa 497 |||||||||||||||||||| Sbjct: 711849 tcggcaaaagaagctgcaaa 711830
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ttcttctattttcttttcaaactg 284 |||||||||||| ||||||||||| Sbjct: 16483291 ttcttctatttttttttcaaactg 16483314
>gb|AC156797.2| Mus musculus BAC clone RP24-88A16 from chromosome 14, complete sequence Length = 166341 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 tcttctattttcttttcaaa 281 |||||||||||||||||||| Sbjct: 110291 tcttctattttcttttcaaa 110310
>gb|CP000188.1| Drosophila melanogaster genomic scaffold 211000022279977 Length = 252652 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 gtttcttctattttcttttc 278 |||||||||||||||||||| Sbjct: 164732 gtttcttctattttcttttc 164751
>gb|U41410.1|SPU41410 Schizosaccharomyces pombe cosmid 800 Length = 40438 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 tgtatgctatatcggcttta 522 |||||||||||||||||||| Sbjct: 18469 tgtatgctatatcggcttta 18450 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,233,895 Number of Sequences: 3902068 Number of extensions: 7233895 Number of successful extensions: 155731 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 60 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 155354 Number of HSP's gapped (non-prelim): 377 length of query: 624 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 601 effective length of database: 17,143,297,704 effective search space: 10303121920104 effective search space used: 10303121920104 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
