>gb|AY847708.1| Triticum aestivum tousled-like protein kinase (TLK1) mRNA, complete
           cds
          Length = 2538

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 215 agggatcagctaatgcggcagcaaaa 240
           ||||||||||||||||||||||||||
Sbjct: 360 agggatcagctaatgcggcagcaaaa 385

>gb|AC129220.3| Mus musculus BAC clone RP24-475J22 from chromosome 5, complete sequence
          Length = 140359

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 255   gttctttcataatttgcatatactggt 281
             ||||||| |||||||||||||||||||
Sbjct: 99470 gttctttaataatttgcatatactggt 99496

>gb|AC114638.16| Mus musculus chromosome 5, clone RP24-123E4, complete sequence
          Length = 184957

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 255    gttctttcataatttgcatatactggt 281
              ||||||| |||||||||||||||||||
Sbjct: 184952 gttctttaataatttgcatatactggt 184926

>gb|AC122257.4| Mus musculus BAC clone RP23-178I11 from 17, complete sequence
          Length = 222314

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 461   cttcatttgttatgcaaatgtt 482
             ||||||||||||||||||||||
Sbjct: 50310 cttcatttgttatgcaaatgtt 50289

>gb|AC006305.3| Homo sapiens chromosome 18, clone RP11-456O19, complete sequence
          Length = 178261

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 348   atgccattttatcatgcatgta 369
             ||||||||||||||||||||||
Sbjct: 90700 atgccattttatcatgcatgta 90721

>gb|AC165167.3| Mus musculus BAC clone RP23-27M6 from chromosome 17, complete sequence
          Length = 235787

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 461    cttcatttgttatgcaaatgtt 482
              ||||||||||||||||||||||
Sbjct: 144863 cttcatttgttatgcaaatgtt 144842



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 461   cttcatttgttatgcaaatgtt 482
             ||||||||||||||||||||||
Sbjct: 78890 cttcatttgttatgcaaatgtt 78869

>gb|AC121771.3| Mus musculus BAC clone RP23-348H21 from chromosome 3, complete sequence
          Length = 190309

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 493    tctttctcttacatcatttat 513
              |||||||||||||||||||||
Sbjct: 149270 tctttctcttacatcatttat 149290

>emb|AL136109.11| Human DNA sequence from clone RP5-924G13 on chromosome 1 Contains a
             novel gene (KIAA1221) and a ribosomal protein L5 (RPL5)
             pseudogene, complete sequence
          Length = 126367

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 231   ggcagcaaaaattatgtctgg 251
             |||||||||||||||||||||
Sbjct: 50729 ggcagcaaaaattatgtctgg 50749

>gb|AC105201.3| Homo sapiens chromosome 18, clone RP11-244M2, complete sequence
          Length = 151032

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 304   tgggaagagccctgaagtacagttgaaca 332
             ||||||||| ||||||| |||||||||||
Sbjct: 57149 tgggaagagacctgaaggacagttgaaca 57121

>ref|XM_691004.1| PREDICTED: Danio rerio similar to Retinitis pigmentosa 1-like 1
            protein (LOC567707), mRNA
          Length = 9429

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 450  ttggatttctccttcatttgt 470
            |||||||||||||||||||||
Sbjct: 3867 ttggatttctccttcatttgt 3847

>dbj|AB060586.1| Mucor hiemalis endom mRNA for Endo-b-N-acetylglucosaminidase,
           complete cds
          Length = 2306

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 451 tggatttctccttcatttgttatgc 475
           |||||||||||||||||||| ||||
Sbjct: 697 tggatttctccttcatttgtcatgc 673

>emb|BX842684.4| Zebrafish DNA sequence from clone DKEY-33I22 in linkage group 20,
             complete sequence
          Length = 140982

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 450   ttggatttctccttcatttgt 470
             |||||||||||||||||||||
Sbjct: 59182 ttggatttctccttcatttgt 59162

>dbj|AK115852.1| Ciona intestinalis cDNA, clone:cilv031m23, full insert sequence
          Length = 2058

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 270 gcatatactggttgttgcagc 290
           |||||||||||||||||||||
Sbjct: 575 gcatatactggttgttgcagc 595

>gb|AC147476.3| Mus musculus BAC clone RP23-132H10 from 3, complete sequence
          Length = 197405

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 493    tctttctcttacatcatttat 513
              |||||||||||||||||||||
Sbjct: 125231 tctttctcttacatcatttat 125211

>gb|AC102509.6| Mus musculus chromosome 7, clone RP24-327G7, complete sequence
          Length = 186990

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 50  aaattatatggtggtccatg 69
           ||||||||||||||||||||
Sbjct: 718 aaattatatggtggtccatg 699

>gb|AC159829.10| Mus musculus 10 BAC RP23-269H11 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 189452

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 298    tattagtgggaagagccctg 317
              ||||||||||||||||||||
Sbjct: 117140 tattagtgggaagagccctg 117121

>gb|AC102494.6| Mus musculus chromosome 7, clone RP24-565J5, complete sequence
          Length = 161721

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     aaattatatggtggtccatg 69
              ||||||||||||||||||||
Sbjct: 143265 aaattatatggtggtccatg 143246

>emb|CR954187.2| Medicago truncatula chromosome 5 clone mth2-181i2, COMPLETE SEQUENCE
          Length = 128654

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 491    tttctttctcttacatcatttatt 514
              ||||||||||||| ||||||||||
Sbjct: 109798 tttctttctcttatatcatttatt 109775

>emb|BX510661.4| Human DNA sequence from clone RP13-766B11 on chromosome X, complete
             sequence
          Length = 52942

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   ttctttcatgattgtgaatt 212
             ||||||||||||||||||||
Sbjct: 46914 ttctttcatgattgtgaatt 46895

>emb|AL513209.16| Human DNA sequence from clone RP11-177F15 on chromosome 1 Contains part
             of a novel gene (FLJ33910), complete sequence
          Length = 140169

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 455   tttctccttcatttgttatg 474
             ||||||||||||||||||||
Sbjct: 95688 tttctccttcatttgttatg 95669

>gb|AC026110.42| Homo sapiens 12 BAC RP11-434E3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 153190

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 338   atgtcaattgatgccattttatcatgca 365
             |||||| ||||||| |||||||||||||
Sbjct: 42967 atgtcatttgatgctattttatcatgca 42940

>emb|AL669943.9| Mouse DNA sequence from clone RP23-286C19 on chromosome 11 Contains a
             pseudogene similar to part of ribosomal protein L7a
             (Rpl7a) and a heat shock protein 1 (chaperonin) (Hspd1)
             pseudogene, complete sequence
          Length = 204312

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 560   ctggttttgtactcttagat 579
             ||||||||||||||||||||
Sbjct: 65572 ctggttttgtactcttagat 65553

>dbj|BS000658.1| Pan troglodytes chromosome Y clone:PTBY-004A05, complete sequences
          Length = 15000

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 491   tttctttctcttacatcatt 510
             ||||||||||||||||||||
Sbjct: 12546 tttctttctcttacatcatt 12565

>dbj|BS000659.1| Pan troglodytes chromosome Y clone:PTBY-005K16, complete sequences
          Length = 106160

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 491   tttctttctcttacatcatt 510
             ||||||||||||||||||||
Sbjct: 97436 tttctttctcttacatcatt 97417

>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 491      tttctttctcttacatcatt 510
                ||||||||||||||||||||
Sbjct: 19173795 tttctttctcttacatcatt 19173776

>gb|DP000052.1| Sus scrofa target 126 genomic scaffold
          Length = 432382

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 259    tttcataatttgcatatact 278
              ||||||||||||||||||||
Sbjct: 235891 tttcataatttgcatatact 235910

>emb|BX510989.13| Zebrafish DNA sequence from clone CH211-76L23 in linkage group 3,
              complete sequence
          Length = 169229

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    acatacatagctggaaaaat 179
              ||||||||||||||||||||
Sbjct: 104141 acatacatagctggaaaaat 104160

>gb|AC152004.4| Pan troglodytes FOSMID clone CH1251-1187E2 from chromosome y,
            complete sequence
          Length = 40597

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 491  tttctttctcttacatcatt 510
            ||||||||||||||||||||
Sbjct: 7465 tttctttctcttacatcatt 7446

>gb|AC023513.21|AC023513 Homo sapiens 12 BAC RP11-440G2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 117946

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   ttctttcataatttgcatat 275
             ||||||||||||||||||||
Sbjct: 83202 ttctttcataatttgcatat 83221

>gb|AC084464.1|AC084464 Caenorhabditis briggsae cosmid CB038P16, complete sequence
          Length = 99890

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 157   caaacatacatagctggaaaaatt 180
             ||||||||||||| ||||||||||
Sbjct: 14859 caaacatacataggtggaaaaatt 14882

>gb|AC027335.6| Homo sapiens chromosome 5 clone CTD-2201E9, complete sequence
          Length = 131499

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 474   gcaaatgttcatcttagttt 493
             ||||||||||||||||||||
Sbjct: 85053 gcaaatgttcatcttagttt 85072

>dbj|AK118772.1| Arabidopsis thaliana At1g07131 mRNA for unknown protein, complete
           cds, clone: RAFL21-11-D12
          Length = 853

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 465 atttgttatgcaaatgttcatctt 488
           ||||||||||| ||||||||||||
Sbjct: 1   atttgttatgctaatgttcatctt 24

>gb|AC140231.3| Mus musculus BAC clone RP24-493L15 from 6, complete sequence
          Length = 185517

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 522   ctgatgcattgtatgtattc 541
             ||||||||||||||||||||
Sbjct: 37733 ctgatgcattgtatgtattc 37714

>emb|AL929508.6| Zebrafish DNA sequence from clone CH211-158G13, complete sequence
          Length = 180029

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 516   tgttatctgatgcattgtatgtat 539
             |||||| |||||||||||||||||
Sbjct: 67669 tgttatgtgatgcattgtatgtat 67646

>gb|AC152962.1| Mus musculus 6 BAC RP23-465F11 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 187047

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 522    ctgatgcattgtatgtattc 541
              ||||||||||||||||||||
Sbjct: 165096 ctgatgcattgtatgtattc 165077

>emb|AL805910.7| Mouse DNA sequence from clone RP23-144K17 on chromosome 4, complete
            sequence
          Length = 200933

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 199  catgattgtgaattccaggg 218
            ||||||||||||||||||||
Sbjct: 2307 catgattgtgaattccaggg 2326

>emb|AL807801.3| Mouse DNA sequence from clone RP23-235A15 on chromosome 2, complete
             sequence
          Length = 158498

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   agctggaaaaattctgtctg 187
             ||||||||||||||||||||
Sbjct: 93187 agctggaaaaattctgtctg 93206


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,464,576
Number of Sequences: 3902068
Number of extensions: 6464576
Number of successful extensions: 122854
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122728
Number of HSP's gapped (non-prelim): 126
length of query: 635
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 612
effective length of database: 17,143,297,704
effective search space: 10491698194848
effective search space used: 10491698194848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)