ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags19k09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK067197.1| Oryza sativa (japonica cultivar-group) cDNA clon... 502 e-139
2dbj|AK062036.1| Oryza sativa (japonica cultivar-group) cDNA clon... 494 e-136
3gb|AY104447.1| Zea mays PCO128779 mRNA sequence 297 2e-77
4gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome... 180 3e-42
5gb|AC144735.2| Oryza sativa (japonica cultivar-group) chromosome... 180 3e-42
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 180 3e-42
7gb|AC147364.7| Medicago truncatula clone mth2-68g24, complete se... 44 0.49
8gb|AC132854.8| Mus musculus chromosome 1, clone RP24-392J14, com... 42 1.9
9ref|XM_970319.1| PREDICTED: Tribolium castaneum similar to suppr... 42 1.9
10gb|AC140489.2| Mus musculus BAC clone RP24-144C10 from chromosom... 42 1.9
11gb|AC152925.1| Tribolium castaneum BAC T.cast_C17P12 (Clemson U... 40 7.7
12gb|BC063368.1| Xenopus tropicalis lamin B1, mRNA (cDNA clone MGC... 40 7.7
13gb|AC146132.3| Pan troglodytes BAC clone RP43-23H13 from 7, comp... 40 7.7
14emb|BX248114.23| Zebrafish DNA sequence from clone CH211-209I22 ... 40 7.7
15emb|CR376739.10| Zebrafish DNA sequence from clone CH211-44M2 in... 40 7.7
16gb|AC142299.1| Pan troglodytes BAC clone RP43-121O18 from 7, com... 40 7.7
17gb|AY197760.1| Drosophila melanogaster dopa decarboxylase (Ddc) ... 40 7.7
18gb|AY197757.1| Drosophila melanogaster dopa decarboxylase (Ddc) ... 40 7.7
19emb|AL591004.3| Human DNA sequence from clone RP11-497F24 on chr... 40 7.7
20emb|AL136172.16| Human DNA sequence from clone RP4-621N11 on chr... 40 7.7
21gb|AC141932.2| Homo sapiens fosmid clone XXFOS-80253C10 from 7, ... 40 7.7
22ref|NM_203867.1| Xenopus tropicalis lamin B1 (lmnb1), mRNA 40 7.7
23emb|CR628406.8| Zebrafish DNA sequence from clone CH211-146A2 in... 40 7.7
24gb|AC092897.6| Homo sapiens 3 BAC RP11-292P2 (Roswell Park Cance... 40 7.7
25emb|BX927335.8| Zebrafish DNA sequence from clone CH211-30G3 in ... 40 7.7
26emb|BX649516.8| Zebrafish DNA sequence from clone DKEY-51D8 in l... 40 7.7
27dbj|AK156521.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 7.7
28emb|BX247866.12| Zebrafish DNA sequence from clone DKEY-216J12 i... 40 7.7
29gb|AF303741.1|AF303741 Chilo iridescent virus complete genome 40 7.7
30emb|AL732370.10| Mouse DNA sequence from clone RP23-413I21 on ch... 40 7.7
31emb|BX005328.9| Zebrafish DNA sequence from clone DKEY-63D15 in ... 40 7.7
32gb|AC022317.8| Homo sapiens BAC clone RP11-104A24 from 4, comple... 40 7.7
33gb|AC010127.12| Homo sapiens BAC clone RP11-2I8 from 2, complete... 40 7.7
34emb|CT033816.7| Zebrafish DNA sequence from clone CH211-109N19 i... 40 7.7
35emb|BX649264.4| Zebrafish DNA sequence from clone CH211-260K9 in... 40 7.7
36emb|CT025695.6| Zebrafish DNA sequence from clone CH211-246B8 in... 40 7.7
37emb|CR942583.1| Xenopus tropicalis finished cDNA, clone TGas059i06 40 7.7
38gb|AE016830.1| Enterococcus faecalis V583, complete genome 40 7.7
39dbj|AP001099.5| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 7.7 
>dbj|AK067197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098O16, full
            insert sequence
          Length = 3943

 Score =  502 bits (253), Expect = e-139
 Identities = 487/565 (86%), Gaps = 10/565 (1%)
 Strand = Plus / Plus

                                                                        
Query: 10   gcatctgaaagtagacaggnagtacctagcaactaaggaggaggcggcattacaagaagg 69
            ||||| ||||||||||||| ||||||| |||| |||||||||||||||| | ||||||||
Sbjct: 2801 gcatccgaaagtagacagg-agtacctggcaattaaggaggaggcggcaatgcaagaagg 2859

                                                                        
Query: 70   acgcgccaaacagcttgaagaagaaataaaggagcttagatttaggcacaaaaaggagct 129
            ||| || |||||||||||||||||||||||||||||| |   ||||||||||||||||||
Sbjct: 2860 acgggcgaaacagcttgaagaagaaataaaggagcttcgtactaggcacaaaaaggagct 2919

                                                                        
Query: 130  gcaagaagcagcagatcacagggcgctgcttgagacggaccttgaaagggaaaaggctgc 189
            |||||| |||||||| ||||||| ||||||||||| |||||||||||| |||||||||||
Sbjct: 2920 gcaagatgcagcagaacacagggagctgcttgagaaggaccttgaaagagaaaaggctgc 2979

                                                                        
Query: 190  cagggcagaacttgagaaaacatcttcccacgacttacctaaaattccacttccagatca 249
            ||||||||| |||||||||||||||||||  ||   ||| |||||||| |||||||||||
Sbjct: 2980 cagggcagagcttgagaaaacatcttcccgtgatgcaccaaaaattccgcttccagatca 3039

                                                                        
Query: 250  aacaaaaaatgctccccaaagaaagctctctagtgttagcagta---------tggaaga 300
             |||| ||||||||| |  |||||||||||||||  | ||||||         |||||||
Sbjct: 3040 gacaagaaatgctcctctcagaaagctctctagttctggcagtatcaatagtctggaaga 3099

                                                                        
Query: 301  aagccacttccttcaagcatcattggacttgtcagatagtgcttcattggagaggagaac 360
            |||||| ||||||||||||||||| || |||||||| |  |||||||| |||||||||| 
Sbjct: 3100 aagccatttccttcaagcatcattagatttgtcagacaacgcttcattagagaggagaat 3159

                                                                        
Query: 361  gtctgcagacagtaatatgtcatactatctgaggagcatgactccaagtgcttttgaatc 420
            |||||| || ||||||||||| || |||||  ||||||||||||||||||||||||||||
Sbjct: 3160 gtctgctgaaagtaatatgtcgtattatcttcggagcatgactccaagtgcttttgaatc 3219

                                                                        
Query: 421  agcactccgtcaaaaggatggagaattggcttcttacatgtcacgcttggcctcactgga 480
            |||||||||||| || ||||||||  | ||||||||||  || || ||||||||| | ||
Sbjct: 3220 agcactccgtcagaaagatggagagctagcttcttacacatcgcgtttggcctcattaga 3279

                                                                        
Query: 481  atctattcggaattccctggcagaggagttggtaaaactgacggaacaatgtgaaaagtt 540
            ||||||||||||||| ||||||||||||||||| ||| |||| ||||| ||||| |||||
Sbjct: 3280 atctattcggaattctctggcagaggagttggtgaaaatgactgaacagtgtgagaagtt 3339

                                     
Query: 541  gcggaatgaagctgctgctctgcct 565
            ||| |  || ||| |||||||||||
Sbjct: 3340 gcgtaccgaggcttctgctctgcct 3364
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>dbj|AK062036.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-H08, full
           insert sequence
          Length = 1169

 Score =  494 bits (249), Expect = e-136
 Identities = 486/565 (86%), Gaps = 10/565 (1%)
 Strand = Plus / Plus

                                                                       
Query: 10  gcatctgaaagtagacaggnagtacctagcaactaaggaggaggcggcattacaagaagg 69
           ||||| ||||||||||||| ||||||| |||| |||||||||||||||| | ||||||||
Sbjct: 37  gcatccgaaagtagacagg-agtacctggcaattaaggaggaggcggcaatgcaagaagg 95

                                                                       
Query: 70  acgcgccaaacagcttgaagaagaaataaaggagcttagatttaggcacaaaaaggagct 129
           ||| || |||||||||||||||||||||||||||||| |   ||||||||||||||||||
Sbjct: 96  acgggcgaaacagcttgaagaagaaataaaggagcttcgtactaggcacaaaaaggagct 155

                                                                       
Query: 130 gcaagaagcagcagatcacagggcgctgcttgagacggaccttgaaagggaaaaggctgc 189
           |||||| |||||||| ||||||| ||||||||||| |||||||||||| |||||||||||
Sbjct: 156 gcaagatgcagcagaacacagggagctgcttgagaaggaccttgaaagagaaaaggctgc 215

                                                                       
Query: 190 cagggcagaacttgagaaaacatcttcccacgacttacctaaaattccacttccagatca 249
           ||||||||| |||||||||||||||||||  ||   ||| |||||||| |||||||||||
Sbjct: 216 cagggcagagcttgagaaaacatcttcccgtgatgcaccaaaaattccgcttccagatca 275

                                                                       
Query: 250 aacaaaaaatgctccccaaagaaagctctctagtgttagcagta---------tggaaga 300
            |||| ||||||||| |  |||||||||||||||  | ||||||         |||||||
Sbjct: 276 gacaagaaatgctcctctcagaaagctctctagttctggcagtatcaatagtctggaaga 335

                                                                       
Query: 301 aagccacttccttcaagcatcattggacttgtcagatagtgcttcattggagaggagaac 360
           |||||| ||||||||||||||||| || |||||||| |  |||||||| |||||||||| 
Sbjct: 336 aagccatttccttcaagcatcattagatttgtcagacaacgcttcattagagaggagaat 395

                                                                       
Query: 361 gtctgcagacagtaatatgtcatactatctgaggagcatgactccaagtgcttttgaatc 420
           |||||| || ||||||| ||| || |||||  ||||||||||||||||||||||||||||
Sbjct: 396 gtctgctgaaagtaatacgtcgtattatcttcggagcatgactccaagtgcttttgaatc 455

                                                                       
Query: 421 agcactccgtcaaaaggatggagaattggcttcttacatgtcacgcttggcctcactgga 480
           |||||||||||| || ||||||||  | ||||||||||  || || ||||||||| | ||
Sbjct: 456 agcactccgtcagaaagatggagagctagcttcttacacatcgcgtttggcctcattaga 515

                                                                       
Query: 481 atctattcggaattccctggcagaggagttggtaaaactgacggaacaatgtgaaaagtt 540
           ||||||||||||||| ||||||||||||||||| ||| |||| ||||| ||||| |||||
Sbjct: 516 atctattcggaattctctggcagaggagttggtgaaaatgactgaacagtgtgagaagtt 575

                                    
Query: 541 gcggaatgaagctgctgctctgcct 565
           ||| |  || ||| |||||||||||
Sbjct: 576 gcgtaccgaggcttctgctctgcct 600
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>gb|AY104447.1| Zea mays PCO128779 mRNA sequence
          Length = 853

 Score =  297 bits (150), Expect = 2e-77
 Identities = 240/270 (88%)
 Strand = Plus / Plus

                                                                       
Query: 296 gaagaaagccacttccttcaagcatcattggacttgtcagatagtgcttcattggagagg 355
           ||||||||||| |||||||| || || ||||| || || || | ||||||||| ||||||
Sbjct: 457 gaagaaagccatttccttcaggcttcgttggatttatctgacaatgcttcattagagagg 516

                                                                       
Query: 356 agaacgtctgcagacagtaatatgtcatactatctgaggagcatgactccaagtgctttt 415
            ||| |||| |||| |||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 517 cgaatgtcttcagaaagtaatatgtcatattatctgaggaccatgactccaagtgctttt 576

                                                                       
Query: 416 gaatcagcactccgtcaaaaggatggagaattggcttcttacatgtcacgcttggcctca 475
           || |||||||| |||||||||||||||||  | |||||||||||||| ||||||||||||
Sbjct: 577 gagtcagcacttcgtcaaaaggatggagagcttgcttcttacatgtctcgcttggcctca 636

                                                                       
Query: 476 ctggaatctattcggaattccctggcagaggagttggtaaaactgacggaacaatgtgaa 535
            ||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||
Sbjct: 637 ttggaatctattcggaattcactggcagaggagttggtgaaactgacagaacaatgtgaa 696

                                         
Query: 536 aagttgcggaatgaagctgctgctctgcct 565
           ||||| |||| |||||| |||||| |||||
Sbjct: 697 aagttacggactgaagccgctgctgtgcct 726



 Score =  202 bits (102), Expect = 9e-49
 Identities = 185/210 (88%), Gaps = 2/210 (0%)
 Strand = Plus / Plus

                                                                       
Query: 10  gcatctgaaagtagacaggnagtacctagcaactaaggaggaggcggcattacaagaagg 69
           ||||||||||||||||||| |||||||||||| ||| |||||||| ||| | ||||||||
Sbjct: 162 gcatctgaaagtagacagg-agtacctagcaattaaagaggaggcagcaatgcaagaagg 220

                                                                       
Query: 70  acgcgccaaacagcttgaagaagaaataaaggagcttagatttaggcacaaaaaggagct 129
            || || || ||||| |||||||| |||||||| |||||| ||| ||||||  |||||||
Sbjct: 221 gcgggctaagcagctcgaagaagagataaaggatcttagagttaagcacaaggaggagct 280

                                                                       
Query: 130 gcaagaagcagcagatcacagggcgctgcttgagacggaccttgaaagggaaaaggctgc 189
           ||||||||||||||| |||||||  || ||||||| ||||||||||||||||||||||||
Sbjct: 281 gcaagaagcagcagaacacagggaacttcttgagaaggaccttgaaagggaaaaggctgc 340

                                         
Query: 190 ca-gggcagaacttgagaaaacatcttccc 218
           || |||||||| ||||||||||| ||||||
Sbjct: 341 caggggcagaaattgagaaaacaacttccc 370
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>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06,
             complete sequence
          Length = 139139

 Score =  180 bits (91), Expect = 3e-42
 Identities = 140/155 (90%), Gaps = 1/155 (0%)
 Strand = Plus / Minus

                                                                         
Query: 10    gcatctgaaagtagacaggnagtacctagcaactaaggaggaggcggcattacaagaagg 69
             ||||| ||||||||||||| ||||||| |||| |||||||||||||||| | ||||||||
Sbjct: 15279 gcatccgaaagtagacagg-agtacctggcaattaaggaggaggcggcaatgcaagaagg 15221

                                                                         
Query: 70    acgcgccaaacagcttgaagaagaaataaaggagcttagatttaggcacaaaaaggagct 129
             ||| || |||||||||||||||||||||||||||||| |   ||||||||||||||||||
Sbjct: 15220 acgggcgaaacagcttgaagaagaaataaaggagcttcgtactaggcacaaaaaggagct 15161

                                                
Query: 130   gcaagaagcagcagatcacagggcgctgcttgaga 164
             |||||| |||||||| ||||||| |||||||||||
Sbjct: 15160 gcaagatgcagcagaacacagggagctgcttgaga 15126



 Score =  176 bits (89), Expect = 5e-41
 Identities = 146/165 (88%)
 Strand = Plus / Minus

                                                                         
Query: 294   tggaagaaagccacttccttcaagcatcattggacttgtcagatagtgcttcattggaga 353
             ||||||||||||| ||||||||||||||||| || |||||||| |  |||||||| ||||
Sbjct: 14197 tggaagaaagccatttccttcaagcatcattagatttgtcagacaacgcttcattagaga 14138

                                                                         
Query: 354   ggagaacgtctgcagacagtaatatgtcatactatctgaggagcatgactccaagtgctt 413
             |||||| |||||| || ||||||||||| || |||||  |||||||||||||||||||||
Sbjct: 14137 ggagaatgtctgctgaaagtaatatgtcgtattatcttcggagcatgactccaagtgctt 14078

                                                          
Query: 414   ttgaatcagcactccgtcaaaaggatggagaattggcttcttaca 458
             ||||||||||||||||||| || ||||||||  | ||||||||||
Sbjct: 14077 ttgaatcagcactccgtcagaaagatggagagctagcttcttaca 14033



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                         
Query: 166   ggaccttgaaagggaaaaggctgccagggcagaacttgagaaaacatcttcccacgactt 225
             |||||||||||| |||||||||||||||||||| |||||||||||||||||||  ||   
Sbjct: 14445 ggaccttgaaagagaaaaggctgccagggcagagcttgagaaaacatcttcccgtgatgc 14386

                                          
Query: 226   acctaaaattccacttccagatcaaacaa 254
             ||| |||||||| ||||||||||| ||||
Sbjct: 14385 accaaaaattccgcttccagatcagacaa 14357



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                         
Query: 469   ggcctcactggaatctattcggaattccctggcagaggagttggtaaaactgacggaaca 528
             ||||||| | ||||||||||||||||| ||||||||||||||||| ||| |||| |||||
Sbjct: 13847 ggcctcattagaatctattcggaattctctggcagaggagttggtgaaaatgactgaaca 13788
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>gb|AC144735.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0001A14,
              complete sequence
          Length = 129292

 Score =  180 bits (91), Expect = 3e-42
 Identities = 140/155 (90%), Gaps = 1/155 (0%)
 Strand = Plus / Minus

                                                                          
Query: 10     gcatctgaaagtagacaggnagtacctagcaactaaggaggaggcggcattacaagaagg 69
              ||||| ||||||||||||| ||||||| |||| |||||||||||||||| | ||||||||
Sbjct: 117997 gcatccgaaagtagacagg-agtacctggcaattaaggaggaggcggcaatgcaagaagg 117939

                                                                          
Query: 70     acgcgccaaacagcttgaagaagaaataaaggagcttagatttaggcacaaaaaggagct 129
              ||| || |||||||||||||||||||||||||||||| |   ||||||||||||||||||
Sbjct: 117938 acgggcgaaacagcttgaagaagaaataaaggagcttcgtactaggcacaaaaaggagct 117879

                                                 
Query: 130    gcaagaagcagcagatcacagggcgctgcttgaga 164
              |||||| |||||||| ||||||| |||||||||||
Sbjct: 117878 gcaagatgcagcagaacacagggagctgcttgaga 117844



 Score =  176 bits (89), Expect = 5e-41
 Identities = 146/165 (88%)
 Strand = Plus / Minus

                                                                          
Query: 294    tggaagaaagccacttccttcaagcatcattggacttgtcagatagtgcttcattggaga 353
              ||||||||||||| ||||||||||||||||| || |||||||| |  |||||||| ||||
Sbjct: 116915 tggaagaaagccatttccttcaagcatcattagatttgtcagacaacgcttcattagaga 116856

                                                                          
Query: 354    ggagaacgtctgcagacagtaatatgtcatactatctgaggagcatgactccaagtgctt 413
              |||||| |||||| || ||||||||||| || |||||  |||||||||||||||||||||
Sbjct: 116855 ggagaatgtctgctgaaagtaatatgtcgtattatcttcggagcatgactccaagtgctt 116796

                                                           
Query: 414    ttgaatcagcactccgtcaaaaggatggagaattggcttcttaca 458
              ||||||||||||||||||| || ||||||||  | ||||||||||
Sbjct: 116795 ttgaatcagcactccgtcagaaagatggagagctagcttcttaca 116751



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                          
Query: 166    ggaccttgaaagggaaaaggctgccagggcagaacttgagaaaacatcttcccacgactt 225
              |||||||||||| |||||||||||||||||||| |||||||||||||||||||  ||   
Sbjct: 117163 ggaccttgaaagagaaaaggctgccagggcagagcttgagaaaacatcttcccgtgatgc 117104

                                           
Query: 226    acctaaaattccacttccagatcaaacaa 254
              ||| |||||||| ||||||||||| ||||
Sbjct: 117103 accaaaaattccgcttccagatcagacaa 117075



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                          
Query: 469    ggcctcactggaatctattcggaattccctggcagaggagttggtaaaactgacggaaca 528
              ||||||| | ||||||||||||||||| ||||||||||||||||| ||| |||| |||||
Sbjct: 116565 ggcctcattagaatctattcggaattctctggcagaggagttggtgaaaatgactgaaca 116506
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  180 bits (91), Expect = 3e-42
 Identities = 140/155 (90%), Gaps = 1/155 (0%)
 Strand = Plus / Minus

                                                                            
Query: 10       gcatctgaaagtagacaggnagtacctagcaactaaggaggaggcggcattacaagaagg 69
                ||||| ||||||||||||| ||||||| |||| |||||||||||||||| | ||||||||
Sbjct: 27650721 gcatccgaaagtagacagg-agtacctggcaattaaggaggaggcggcaatgcaagaagg 27650663

                                                                            
Query: 70       acgcgccaaacagcttgaagaagaaataaaggagcttagatttaggcacaaaaaggagct 129
                ||| || |||||||||||||||||||||||||||||| |   ||||||||||||||||||
Sbjct: 27650662 acgggcgaaacagcttgaagaagaaataaaggagcttcgtactaggcacaaaaaggagct 27650603

                                                   
Query: 130      gcaagaagcagcagatcacagggcgctgcttgaga 164
                |||||| |||||||| ||||||| |||||||||||
Sbjct: 27650602 gcaagatgcagcagaacacagggagctgcttgaga 27650568



 Score =  176 bits (89), Expect = 5e-41
 Identities = 146/165 (88%)
 Strand = Plus / Minus

                                                                            
Query: 294      tggaagaaagccacttccttcaagcatcattggacttgtcagatagtgcttcattggaga 353
                ||||||||||||| ||||||||||||||||| || |||||||| |  |||||||| ||||
Sbjct: 27649639 tggaagaaagccatttccttcaagcatcattagatttgtcagacaacgcttcattagaga 27649580

                                                                            
Query: 354      ggagaacgtctgcagacagtaatatgtcatactatctgaggagcatgactccaagtgctt 413
                |||||| |||||| || ||||||||||| || |||||  |||||||||||||||||||||
Sbjct: 27649579 ggagaatgtctgctgaaagtaatatgtcgtattatcttcggagcatgactccaagtgctt 27649520

                                                             
Query: 414      ttgaatcagcactccgtcaaaaggatggagaattggcttcttaca 458
                ||||||||||||||||||| || ||||||||  | ||||||||||
Sbjct: 27649519 ttgaatcagcactccgtcagaaagatggagagctagcttcttaca 27649475



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 79/89 (88%)
 Strand = Plus / Minus

                                                                            
Query: 166      ggaccttgaaagggaaaaggctgccagggcagaacttgagaaaacatcttcccacgactt 225
                |||||||||||| |||||||||||||||||||| |||||||||||||||||||  ||   
Sbjct: 27649887 ggaccttgaaagagaaaaggctgccagggcagagcttgagaaaacatcttcccgtgatgc 27649828

                                             
Query: 226      acctaaaattccacttccagatcaaacaa 254
                ||| |||||||| ||||||||||| ||||
Sbjct: 27649827 accaaaaattccgcttccagatcagacaa 27649799



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                            
Query: 469      ggcctcactggaatctattcggaattccctggcagaggagttggtaaaactgacggaaca 528
                ||||||| | ||||||||||||||||| ||||||||||||||||| ||| |||| |||||
Sbjct: 27649289 ggcctcattagaatctattcggaattctctggcagaggagttggtgaaaatgactgaaca 27649230
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>gb|AC147364.7| Medicago truncatula clone mth2-68g24, complete sequence
          Length = 109540

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 438   atggagaattggcttcttacat 459
             ||||||||||||||||||||||
Sbjct: 24808 atggagaattggcttcttacat 24787
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>gb|AC132854.8| Mus musculus chromosome 1, clone RP24-392J14, complete sequence
          Length = 173236

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 339   gtgcttcattggagaggagaa 359
             |||||||||||||||||||||
Sbjct: 30230 gtgcttcattggagaggagaa 30210
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>ref|XM_970319.1| PREDICTED: Tribolium castaneum similar to suppressor of fused
           (LOC664312), mRNA
          Length = 3183

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 544 gaatgaagctgctgctctgcc 564
           |||||||||||||||||||||
Sbjct: 3   gaatgaagctgctgctctgcc 23
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>gb|AC140489.2| Mus musculus BAC clone RP24-144C10 from chromosome 1, complete sequence
          Length = 194368

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 339   gtgcttcattggagaggagaa 359
             |||||||||||||||||||||
Sbjct: 30502 gtgcttcattggagaggagaa 30522
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>gb|AC152925.1| Tribolium castaneum  BAC T.cast_C17P12 (Clemson University Genomics
             Institute Tribolium castaneum BAC Library (Red Flour
             Beetle)) complete sequence
          Length = 50240

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 445   attggcttcttacatgtcac 464
             ||||||||||||||||||||
Sbjct: 47101 attggcttcttacatgtcac 47082
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>gb|BC063368.1| Xenopus tropicalis lamin B1, mRNA (cDNA clone MGC:75974
           IMAGE:5384247), complete cds
          Length = 2563

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  aaacagcttgaagaagaaat 96
           ||||||||||||||||||||
Sbjct: 771 aaacagcttgaagaagaaat 790
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>gb|AC146132.3| Pan troglodytes BAC clone RP43-23H13 from 7, complete sequence
          Length = 164355

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   ttgagaaaacatcttcccac 220
             ||||||||||||||||||||
Sbjct: 62533 ttgagaaaacatcttcccac 62514
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>emb|BX248114.23| Zebrafish DNA sequence from clone CH211-209I22 in linkage group 9,
             complete sequence
          Length = 84427

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 276   tctctagtgttagcagtatg 295
             ||||||||||||||||||||
Sbjct: 40591 tctctagtgttagcagtatg 40572
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>emb|CR376739.10| Zebrafish DNA sequence from clone CH211-44M2 in linkage group 24,
           complete sequence
          Length = 163471

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 405 caagtgcttttgaatcagcactcc 428
           |||||||||||||||||| |||||
Sbjct: 417 caagtgcttttgaatcagtactcc 394
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>gb|AC142299.1| Pan troglodytes BAC clone RP43-121O18 from 7, complete sequence
          Length = 146878

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 201    ttgagaaaacatcttcccac 220
              ||||||||||||||||||||
Sbjct: 127295 ttgagaaaacatcttcccac 127314
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>gb|AY197760.1| Drosophila melanogaster dopa decarboxylase (Ddc) gene, Ddc-R16
            allele, complete cds, alternatively spliced
          Length = 5490

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 243  cagatcaaacaaaaaatgct 262
            ||||||||||||||||||||
Sbjct: 1512 cagatcaaacaaaaaatgct 1493
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>gb|AY197757.1| Drosophila melanogaster dopa decarboxylase (Ddc) gene, Ddc-R9 allele,
            complete cds, alternatively spliced
          Length = 5491

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 243  cagatcaaacaaaaaatgct 262
            ||||||||||||||||||||
Sbjct: 1513 cagatcaaacaaaaaatgct 1494
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>emb|AL591004.3| Human DNA sequence from clone RP11-497F24 on chromosome 6, complete
              sequence
          Length = 159845

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     ttgaagaagaaataaaggag 103
              ||||||||||||||||||||
Sbjct: 124870 ttgaagaagaaataaaggag 124851
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>emb|AL136172.16| Human DNA sequence from clone RP4-621N11 on chromosome 20 Contains the
             5' end of the RBL1 gene for retinoblastoma-like protein 1,
             the 3' end of the C20orf132 gene and three CpG islands,
             complete sequence
          Length = 69413

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   cacaaaaaggagctgcaaga 135
             ||||||||||||||||||||
Sbjct: 52932 cacaaaaaggagctgcaaga 52913
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>gb|AC141932.2| Homo sapiens fosmid clone XXFOS-80253C10 from 7, complete sequence
          Length = 35245

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 201  ttgagaaaacatcttcccac 220
            ||||||||||||||||||||
Sbjct: 8821 ttgagaaaacatcttcccac 8840
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>ref|NM_203867.1| Xenopus tropicalis lamin B1 (lmnb1), mRNA
          Length = 2563

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  aaacagcttgaagaagaaat 96
           ||||||||||||||||||||
Sbjct: 771 aaacagcttgaagaagaaat 790
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>emb|CR628406.8| Zebrafish DNA sequence from clone CH211-146A2 in linkage group 11,
             complete sequence
          Length = 145678

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 248   caaacaaaaaatgctccccaaagaaagctctc 279
             |||||||||||| || |||||| |||||||||
Sbjct: 16516 caaacaaaaaatccttcccaaaaaaagctctc 16485
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>gb|AC092897.6| Homo sapiens 3 BAC RP11-292P2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 127044

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 438   atggagaattggcttcttac 457
             ||||||||||||||||||||
Sbjct: 49604 atggagaattggcttcttac 49585
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>emb|BX927335.8| Zebrafish DNA sequence from clone CH211-30G3 in linkage group 5,
             complete sequence
          Length = 164039

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 499   ggcagaggagttggtaaaac 518
             ||||||||||||||||||||
Sbjct: 85306 ggcagaggagttggtaaaac 85287
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>emb|BX649516.8| Zebrafish DNA sequence from clone DKEY-51D8 in linkage group 14,
             complete sequence
          Length = 209974

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 499   ggcagaggagttggtaaaac 518
             ||||||||||||||||||||
Sbjct: 31693 ggcagaggagttggtaaaac 31712
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>dbj|AK156521.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830028E14 product:unclassifiable, full
           insert sequence
          Length = 1547

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 166 ggaccttgaaagggaaaagg 185
           ||||||||||||||||||||
Sbjct: 879 ggaccttgaaagggaaaagg 898
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>emb|BX247866.12| Zebrafish DNA sequence from clone DKEY-216J12 in linkage group 1,
            complete sequence
          Length = 197473

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 240  ttccagatcaaacaaaaaat 259
            ||||||||||||||||||||
Sbjct: 3062 ttccagatcaaacaaaaaat 3081
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>gb|AF303741.1|AF303741 Chilo iridescent virus complete genome
          Length = 212482

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 76    caaacagcttgaagaagaaataaa 99
             |||| |||||||||||||||||||
Sbjct: 23941 caaaaagcttgaagaagaaataaa 23918
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>emb|AL732370.10| Mouse DNA sequence from clone RP23-413I21 on chromosome X, complete
              sequence
          Length = 199391

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 166    ggaccttgaaagggaaaagg 185
              ||||||||||||||||||||
Sbjct: 181805 ggaccttgaaagggaaaagg 181786
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>emb|BX005328.9| Zebrafish DNA sequence from clone DKEY-63D15 in linkage group 8,
             complete sequence
          Length = 272840

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 499   ggcagaggagttggtaaaac 518
             ||||||||||||||||||||
Sbjct: 12163 ggcagaggagttggtaaaac 12144
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>gb|AC022317.8| Homo sapiens BAC clone RP11-104A24 from 4, complete sequence
          Length = 175020

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    aaacagcttgaagaagaaat 96
             ||||||||||||||||||||
Sbjct: 33816 aaacagcttgaagaagaaat 33835
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>gb|AC010127.12| Homo sapiens BAC clone RP11-2I8 from 2, complete sequence
          Length = 190066

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    caaacagcttgaagaagaaa 95
             ||||||||||||||||||||
Sbjct: 39083 caaacagcttgaagaagaaa 39102
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>emb|CT033816.7| Zebrafish DNA sequence from clone CH211-109N19 in linkage group 1,
              complete sequence
          Length = 166556

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 240    ttccagatcaaacaaaaaat 259
              ||||||||||||||||||||
Sbjct: 139869 ttccagatcaaacaaaaaat 139888
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>emb|BX649264.4| Zebrafish DNA sequence from clone CH211-260K9 in linkage group 20,
              complete sequence
          Length = 194320

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     aaacagcttgaagaagaaat 96
              ||||||||||||||||||||
Sbjct: 112254 aaacagcttgaagaagaaat 112235
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>emb|CT025695.6| Zebrafish DNA sequence from clone CH211-246B8 in linkage group 4,
             complete sequence
          Length = 90788

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 499   ggcagaggagttggtaaaac 518
             ||||||||||||||||||||
Sbjct: 31489 ggcagaggagttggtaaaac 31508
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>emb|CR942583.1| Xenopus tropicalis finished cDNA, clone TGas059i06
          Length = 2371

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  aaacagcttgaagaagaaat 96
           ||||||||||||||||||||
Sbjct: 610 aaacagcttgaagaagaaat 629
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>gb|AE016830.1| Enterococcus faecalis V583, complete genome
          Length = 3218031

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 80      cagcttgaagaagaaataaa 99
               ||||||||||||||||||||
Sbjct: 2734048 cagcttgaagaagaaataaa 2734067
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>dbj|AP001099.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-883A18, complete
             sequence
          Length = 164343

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 391   gaggagcatgactccaagtg 410
             ||||||||||||||||||||
Sbjct: 75318 gaggagcatgactccaagtg 75337


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,049,960
Number of Sequences: 3902068
Number of extensions: 6049960
Number of successful extensions: 118801
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118660
Number of HSP's gapped (non-prelim): 129
length of query: 565
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 542
effective length of database: 17,143,297,704
effective search space: 9291667355568
effective search space used: 9291667355568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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