ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags19j21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GLTR_ARATH (Q9FWA4) Probable glycosyltransferase At3g02350 (EC 2... 214 6e-66
2QUA1_ARATH (Q9LSG3) Glycosyltransferase QUASIMODO1 (EC 2.4.1.-) 207 7e-65
3GSPA_BACSU (P25148) General stress protein A 43 6e-04
4K0329_HUMAN (O15040) Protein KIAA0329/KIAA0297 32 1.9
5TINAG_HUMAN (Q9UJW2) Tubulointerstitial nephritis antigen (TIN-Ag) 31 2.5
6AMT1_CANGA (P41772) Metal-activated transcriptional activator pr... 31 2.5
7RFAJ_ECOLI (P27129) Lipopolysaccharide 1,2-glucosyltransferase (... 31 3.3
8PPNK_CAUCR (P58056) Probable inorganic polyphosphate/ATP-NAD kin... 29 9.5
9LCB2_KLULA (P48241) Serine palmitoyltransferase 2 (EC 2.3.1.50) ... 29 9.5

>GLTR_ARATH (Q9FWA4) Probable glycosyltransferase At3g02350 (EC 2.4.1.-)|
          Length = 561

 Score =  214 bits (544), Expect(2) = 6e-66
 Identities = 93/138 (67%), Positives = 114/138 (82%)
 Frame = +2

Query: 29  MVFLDGDVVVRKDITGLWSIDMKGKVNGAVETCGESFHRFGRYLNFSSPVIAKNFDPDAC 208
           ++FLD DVVV+KD+TGLW I++ GKVNGAVETC  SFHR+G+YLNFS P+I +NF+P AC
Sbjct: 382 ILFLDDDVVVQKDVTGLWKINLDGKVNGAVETCFGSFHRYGQYLNFSHPLIKENFNPSAC 441

Query: 209 GWAFGMNVFDLAEWRRQNITELYHFWQKLNEDGLLWKLGTLPPGLVTFWNKTFPLDRSWH 388
            WAFGMN+FDL  WRR+  T+ YH+WQ LNED  LWKLGTLPPGL+TF++KT  LD+SWH
Sbjct: 442 AWAFGMNIFDLNAWRREKCTDQYHYWQNLNEDRTLWKLGTLPPGLITFYSKTKSLDKSWH 501

Query: 389 VLGLGYNPHVSSRDLERA 442
           VLGLGYNP VS  ++  A
Sbjct: 502 VLGLGYNPGVSMDEIRNA 519



 Score = 57.0 bits (136), Expect(2) = 6e-66
 Identities = 20/38 (52%), Positives = 31/38 (81%)
 Frame = +3

Query: 447 VIHYNGNLKPWLEIGLPKFRSYWSKYLDYDQPFLRECN 560
           VIHYNGN+KPWL+I + +++S W+KY+D +  F++ CN
Sbjct: 521 VIHYNGNMKPWLDIAMNQYKSLWTKYVDNEMEFVQMCN 558



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>QUA1_ARATH (Q9LSG3) Glycosyltransferase QUASIMODO1 (EC 2.4.1.-)|
          Length = 559

 Score =  207 bits (528), Expect(2) = 7e-65
 Identities = 90/138 (65%), Positives = 111/138 (80%)
 Frame = +2

Query: 29  MVFLDGDVVVRKDITGLWSIDMKGKVNGAVETCGESFHRFGRYLNFSSPVIAKNFDPDAC 208
           ++FLD DVVV+KD+TGLW IDM GKVNGAVETC  SFHR+ +Y+NFS P+I + F+P AC
Sbjct: 380 ILFLDDDVVVQKDLTGLWEIDMDGKVNGAVETCFGSFHRYAQYMNFSHPLIKEKFNPKAC 439

Query: 209 GWAFGMNVFDLAEWRRQNITELYHFWQKLNEDGLLWKLGTLPPGLVTFWNKTFPLDRSWH 388
            WA+GMN FDL  WRR+  TE YH+WQ LNE+  LWKLGTLPPGL+TF++ T PLD+SWH
Sbjct: 440 AWAYGMNFFDLDAWRREKCTEEYHYWQNLNENRALWKLGTLPPGLITFYSTTKPLDKSWH 499

Query: 389 VLGLGYNPHVSSRDLERA 442
           VLGLGYNP +S  ++  A
Sbjct: 500 VLGLGYNPSISMDEIRNA 517



 Score = 59.7 bits (143), Expect(2) = 7e-65
 Identities = 21/39 (53%), Positives = 32/39 (82%)
 Frame = +3

Query: 444 AVIHYNGNLKPWLEIGLPKFRSYWSKYLDYDQPFLRECN 560
           AV+H+NGN+KPWL+I + +FR  W+K++DYD  F++ CN
Sbjct: 518 AVVHFNGNMKPWLDIAMNQFRPLWTKHVDYDLEFVQACN 556



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>GSPA_BACSU (P25148) General stress protein A|
          Length = 286

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 26/81 (32%), Positives = 42/81 (51%)
 Frame = +2

Query: 29  MVFLDGDVVVRKDITGLWSIDMKGKVNGAVETCGESFHRFGRYLNFSSPVIAKNFDPDAC 208
           M+++D D +V +DI+ LW +D+      AVE  G+  H   + +N +     K F+    
Sbjct: 107 MIYIDCDALVLEDISKLWDLDIAPYTVAAVEDAGQ--HERLKEMNVTD--TGKYFNS--- 159

Query: 209 GWAFGMNVFDLAEWRRQNITE 271
               G+ + D   WR+QNITE
Sbjct: 160 ----GIMIIDFESWRKQNITE 176



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>K0329_HUMAN (O15040) Protein KIAA0329/KIAA0297|
          Length = 1411

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +1

Query: 430 PGACPQSYITMAT*SPGLRLASPSSEATGQSTLTMISLFCG 552
           PG C QS +T+    PGLRL       T Q+T  +   F G
Sbjct: 223 PGLCKQSDLTLYASRPGLRLWKADVHGTVQATFILKDAFAG 263



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>TINAG_HUMAN (Q9UJW2) Tubulointerstitial nephritis antigen (TIN-Ag)|
          Length = 476

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +2

Query: 248 WRRQNITELYHFWQKLNEDGLLWKLGTLPP 337
           W  QN ++   FW    EDG  ++LGTLPP
Sbjct: 171 WTAQNYSQ---FWGMTLEDGFKFRLGTLPP 197



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>AMT1_CANGA (P41772) Metal-activated transcriptional activator protein AMT1|
          Length = 265

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -1

Query: 117 TAPLTFPFISIDQRPVMSFLTTTSPSRKTXLVELXLVPN 1
           TAPL FP   ID +P+ SF T TS S     +E   + N
Sbjct: 157 TAPLDFPPNGIDNKPMESFYTQTSKSDAVDSLEFDHLMN 195



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>RFAJ_ECOLI (P27129) Lipopolysaccharide 1,2-glucosyltransferase (EC 2.4.1.58)|
          Length = 338

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
 Frame = +2

Query: 29  MVFLDGDVVVRKDITGLWSIDMKGKVNGAVETCGESFHRFGRYLNFSSPVIAKNFDPDAC 208
           +++LD DVV + DI+ L  + + G V   V+                   +++  DP+  
Sbjct: 126 LLYLDADVVCKGDISQLLHLGLNGAVAAVVKDVEP----------MQEKAVSRLSDPELL 175

Query: 209 GWAF--GMNVFDLAEWRRQNITE 271
           G  F  G+   DL +W    +TE
Sbjct: 176 GQYFNSGVVYLDLKKWADAKLTE 198



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>PPNK_CAUCR (P58056) Probable inorganic polyphosphate/ATP-NAD kinase (EC|
           2.7.1.23) (Poly(P)/ATP NAD kinase)
          Length = 260

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -1

Query: 192 KFFAITGLEKFK*RPKRWKLSPQVSTAPLTFPFISIDQRPV 70
           +  A+T +  F  RP+RW+ +    +A +TF  +  D+RPV
Sbjct: 176 RVLALTPISAF--RPRRWRGALLPQSARVTFEILEADKRPV 214



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>LCB2_KLULA (P48241) Serine palmitoyltransferase 2 (EC 2.3.1.50) (Long chain|
           base biosynthesis protein 2) (SPT 2)
          Length = 562

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 17/37 (45%), Positives = 18/37 (48%)
 Frame = -1

Query: 600 LGVGGTGPCFTD*CCIPAEKADHSQGTLTSSFGTWGG 490
           +G  G G C  D   IP    D   GTLT SFG  GG
Sbjct: 338 MGPSGRGVC--DFFGIPCSDIDIMMGTLTKSFGAAGG 372


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,951,603
Number of Sequences: 219361
Number of extensions: 2104721
Number of successful extensions: 5667
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5665
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5481822624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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