ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags19j16 |
|---|---|
| Clone Library Name | barley_pub |
>YDB1_SCHPO (Q10354) Hypothetical protein C22E12.01 in chromosome I| Length = 374 Score = 52.4 bits (124), Expect = 7e-07 Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 9/136 (6%) Frame = +3 Query: 6 RLVLIQILLTSKGISLNPITSLYYVAPCCLGFLFL---------PWVFVELPRLRAVGMF 158 R L Q LL + NP TSL+ + P L FLFL P F+E P + G F Sbjct: 219 RWALTQKLLLDHPWTSNPFTSLFALTP--LMFLFLLVAGLIFEGPVRFIESPAWKEFGPF 276 Query: 159 EPDFFVFGTNSXXXXXXXXXXXXXXGKTSALTMNVAGVVKDWLLIAFSWSVIRDTVTPIN 338 V KTS +T++V G++K+ + I S D + PIN Sbjct: 277 MS--VVILVPGTLAFFMVASEFGLIQKTSIVTLSVCGILKEIITIIASTLFYHDILLPIN 334 Query: 339 LFGYGIAFLGVGYYNH 386 + G I G+G YN+ Sbjct: 335 IVGLVITLCGIGVYNY 350
>VG48_SHV21 (Q01033) Hypothetical gene 48 protein| Length = 797 Score = 40.4 bits (93), Expect = 0.003 Identities = 36/121 (29%), Positives = 46/121 (38%), Gaps = 1/121 (0%) Frame = -2 Query: 362 EGDPVAEEVDRGHRVPDHGPGEGDEQPVLDDAGHVHGERGRLAHEQEDGQXXXXXXXXXX 183 EGD +E D G D G EGDE D G G+ G E ++G+ Sbjct: 611 EGDEGEDEGDEGEDEGDEGEDEGDEGEDEGDEGEDEGDEGE--DEGDEGEDEGDEGD--- 665 Query: 182 XXXXXXXXEHADGAQPGQLDEDPGQEEEAEAAGRDVVERGD-GVERDPLGCEEDLDEDEP 6 +G G ED G E E E D + GD G E + G +E DE + Sbjct: 666 -----------EGEDEGDEGEDEGDEGEDEGDEGDEGDEGDEGDEGEDEGEDEGEDEGDE 714 Query: 5 G 3 G Sbjct: 715 G 715 Score = 36.6 bits (83), Expect = 0.038 Identities = 36/125 (28%), Positives = 46/125 (36%), Gaps = 7/125 (5%) Frame = -2 Query: 362 EGDPVAEEVDRGHRVPDHGPGEGDEQPVLDDAGHVHGERGRLAHEQEDGQXXXXXXXXXX 183 EGD +E D G D G EGDE D G G+ G E ++G+ Sbjct: 492 EGDEGEDEGDEG----DEGKDEGDE----GDEGKDEGDEGDEGDEGDEGEDEWEDEGDEG 543 Query: 182 XXXXXXXXEHAD-----GAQPGQLDEDPGQEE--EAEAAGRDVVERGDGVERDPLGCEED 24 + D G G ED G++E E E G D + G+ D ED Sbjct: 544 EDEGDEGEDEGDEGEDEGEDEGDEGEDEGEDEGDEGEDEGEDEGDEGEDEGEDEGDEGED 603 Query: 23 LDEDE 9 EDE Sbjct: 604 EGEDE 608 Score = 35.8 bits (81), Expect = 0.064 Identities = 30/121 (24%), Positives = 46/121 (38%), Gaps = 1/121 (0%) Frame = -2 Query: 362 EGDPVAEEVDRGHRVPDHGPGEGDEQPVLDDAGHVHGERGRLAHEQEDGQXXXXXXXXXX 183 EG+ +E D G D G E DE+ +D G E E ++G+ Sbjct: 448 EGEDEGDEGDEGDEGEDEGEDEDDEEDEGEDEGDEGDEGEDEGDEGDEGEDEGDEGDEGK 507 Query: 182 XXXXXXXXEHADGAQPGQLDEDPGQEEEAEAAGRDVVERGD-GVERDPLGCEEDLDEDEP 6 +G + + DE E+E E G + + GD G + G +E DE + Sbjct: 508 DEGDEGDEGKDEGDEGDEGDEGDEGEDEWEDEGDEGEDEGDEGEDEGDEGEDEGEDEGDE 567 Query: 5 G 3 G Sbjct: 568 G 568 Score = 34.3 bits (77), Expect = 0.19 Identities = 37/122 (30%), Positives = 46/122 (37%), Gaps = 4/122 (3%) Frame = -2 Query: 362 EGDPVAEE-VDRGHRVPDHGPGEGDEQPVLDDAGHVHGERGRLAHEQ-EDGQXXXXXXXX 189 EGD +E D G D G EGDE +D G + G ++ ++G+ Sbjct: 586 EGDEGEDEGEDEGDEGEDEGEDEGDEGDEGEDEGDEGEDEGDEGEDEGDEGEDEGDEGED 645 Query: 188 XXXXXXXXXXEHADGAQPGQLDEDPGQEEEAEA-AGRDVVERGD-GVERDPLGCEEDLDE 15 E D G ED G E E E G D + GD G E D ED E Sbjct: 646 EGDEGEDEGDEGEDEGDEGDEGEDEGDEGEDEGDEGEDEGDEGDEGDEGDEGDEGEDEGE 705 Query: 14 DE 9 DE Sbjct: 706 DE 707 Score = 29.6 bits (65), Expect = 4.6 Identities = 29/120 (24%), Positives = 42/120 (35%) Frame = -2 Query: 362 EGDPVAEEVDRGHRVPDHGPGEGDEQPVLDDAGHVHGERGRLAHEQEDGQXXXXXXXXXX 183 E D E D G D G EG+++ D G + G ++ED Sbjct: 427 EKDEKEEGEDEGDDGEDEGEDEGEDEGDEGDEGDEGEDEGEDEDDEEDEGEDEGDEGDEG 486 Query: 182 XXXXXXXXEHADGAQPGQLDEDPGQEEEAEAAGRDVVERGDGVERDPLGCEEDLDEDEPG 3 E D G +D G E + G+D + GD + G +E DE + G Sbjct: 487 EDEGDEGDEGEDEGDEGDEGKDEGDEGD---EGKDEGDEGDEGDEGDEGEDEWEDEGDEG 543
>YJT3_YEAST (P39542) Hypothetical protein YJL193w| Length = 402 Score = 35.0 bits (79), Expect = 0.11 Identities = 17/49 (34%), Positives = 29/49 (59%) Frame = +3 Query: 234 GKTSALTMNVAGVVKDWLLIAFSWSVIRDTVTPINLFGYGIAFLGVGYY 380 G+ S LT ++A ++K + +IA SW I +T + +FG + LG+ Y Sbjct: 338 GEVSTLTYSIANLMKRFAIIAVSWVFIGRRITWLQVFGLVLNTLGLFLY 386
>NCKX1_HUMAN (O60721) Sodium/potassium/calcium exchanger 1| (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod Na-Ca+K exchanger) Length = 1099 Score = 34.7 bits (78), Expect = 0.14 Identities = 26/123 (21%), Positives = 42/123 (34%), Gaps = 4/123 (3%) Frame = -2 Query: 362 EGDPVAEEVDRGHRVPDHGPGEGDEQPVLDDAGHVHGERGRLAHEQEDGQXXXXXXXXXX 183 EG+ E +G D EG +D G +H E G + + + + Sbjct: 780 EGEGETETQGKGEECEDENEAEGKGDNEGEDEGEIHAEDGEMKGNEGETESQELSAENHG 839 Query: 182 XXXXXXXXEH----ADGAQPGQLDEDPGQEEEAEAAGRDVVERGDGVERDPLGCEEDLDE 15 +DG + +E+ ++EE E E + E + G EE L Sbjct: 840 EAKNDEKGVEDGGGSDGGDSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSL 899 Query: 14 DEP 6 D P Sbjct: 900 DWP 902
>TPT2_BRAOB (P52178) Triose phosphate/phosphate translocator, non-green| plastid, chloroplast precursor (CTPT) Length = 402 Score = 33.9 bits (76), Expect = 0.24 Identities = 18/49 (36%), Positives = 27/49 (55%) Frame = +3 Query: 237 KTSALTMNVAGVVKDWLLIAFSWSVIRDTVTPINLFGYGIAFLGVGYYN 383 + S +T +V VK ++I S + V+P+N FG GIA GV Y+ Sbjct: 342 RVSPVTHSVGNCVKRVVVIVSSVIFFKTPVSPVNAFGTGIALAGVFLYS 390
>SL35E_HUMAN (Q96K37) Solute carrier family 35 member E1| Length = 266 Score = 32.3 bits (72), Expect = 0.71 Identities = 18/47 (38%), Positives = 26/47 (55%) Frame = +3 Query: 243 SALTMNVAGVVKDWLLIAFSWSVIRDTVTPINLFGYGIAFLGVGYYN 383 S L+ +VA K ++I S ++R+ VT N+ G A LGV YN Sbjct: 143 SPLSYSVANATKRIMVITVSLIMLRNPVTSTNVLGMMTAILGVFLYN 189
>SL35E_MOUSE (Q8CD26) Solute carrier family 35 member E1| Length = 265 Score = 32.3 bits (72), Expect = 0.71 Identities = 18/47 (38%), Positives = 26/47 (55%) Frame = +3 Query: 243 SALTMNVAGVVKDWLLIAFSWSVIRDTVTPINLFGYGIAFLGVGYYN 383 S L+ +VA K ++I S ++R+ VT N+ G A LGV YN Sbjct: 143 SPLSYSVANATKRIMVITVSLIMLRNPVTSTNVLGMMTAILGVFLYN 189
>MYST4_MACFA (Q8WML3) Histone acetyltransferase MYST4 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 4) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 4) Length = 1784 Score = 32.0 bits (71), Expect = 0.93 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = -2 Query: 125 DEDPGQEEEAEAAGRDVVERGDGVERDPLGCEEDLDEDEP 6 +E+ +EEE E G + E G VE+DP G + +++EP Sbjct: 1066 EEEEEEEEEEEEEGEEEEEEGGNVEKDPDGAKSQ-EKEEP 1104
>SRCH_RABIT (P16230) Sarcoplasmic reticulum histidine-rich calcium-binding| protein precursor Length = 852 Score = 32.0 bits (71), Expect = 0.93 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Frame = -2 Query: 362 EGDPVAEEVDRGHRVPDHGPGEGDEQPVLDDAGHVH--GERGRLAHEQEDG 216 EGD + + HR HG E ++ DD G H RG HE++DG Sbjct: 440 EGDSTESDRHQAHRHRGHGEEEDEDD---DDEGEHHHVPHRGHRGHEEDDG 487
>SUHW3_MOUSE (Q6P3Y5) Suppressor of hairy wing homolog 3| Length = 742 Score = 32.0 bits (71), Expect = 0.93 Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 3/99 (3%) Frame = -3 Query: 373 PTPRKAIP*PKRLIGVTVSRITDQEKAMSSQSLTTPATFM---VSADVLPTSKKTARLSA 203 P + +P P + + S + Q +A S S T P+T + V T+K +++SA Sbjct: 505 PKELEGLP-PGTKVIIRASLGSSQSRASSPPSSTIPSTSLQLSVPKSKSTTTKNNSKVSA 563 Query: 202 NAQRELVPKTKKSGSNMPTARSLGSSTKTQGRKRKPRQQ 86 N P+T + + P+A G+ T K +Q+ Sbjct: 564 NKATTTSPQTVATTTGKPSASKPGTGTTKSKAKPSYKQK 602
>CMGA_HORSE (Q9XS63) Chromogranin A precursor (CgA) [Contains: Pancreastatin;| WE-14] Length = 448 Score = 31.2 bits (69), Expect = 1.6 Identities = 31/131 (23%), Positives = 48/131 (36%), Gaps = 2/131 (1%) Frame = -2 Query: 389 DVVVVAHAQEGDPVAEEVDRGHRVPDHGPGEGDEQPVLDDAGHVHGERGRLAHEQEDGQX 210 ++ V Q +EV D GD + V ++ G R + A E E Q Sbjct: 102 ELAEVLEKQNHQAELKEVTEEALSEDAAEARGDSKEVEENGEDADGARPQAALEPE--QE 159 Query: 209 XXXXXXXXXXXXXXXXXEHADGAQPGQLDEDPGQEEEAEAAGRDVV--ERGDGVERDPLG 36 H+ P Q DP E ++++ + +V E+G G ER Sbjct: 160 SRVEDAQAPGEEKEAINTHSPTRLPSQKHPDPQAEGDSDSPSQGLVDREKGLGAERGQQA 219 Query: 35 CEEDLDEDEPG 3 E+ +EDE G Sbjct: 220 KREE-EEDEAG 229
>NSBP1_MOUSE (Q9JL35) Nucleosome-binding protein 1 (Nucleosome-binding protein| 45) (NBP-45) (GARP45 protein) Length = 406 Score = 31.2 bits (69), Expect = 1.6 Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 4/124 (3%) Frame = -2 Query: 371 HAQEGDPVAEEVDRGHRVPDHGPGEGDE-QPVLDDAGHVH---GERGRLAHEQEDGQXXX 204 H ++G E D G + H +G E QP D ++H GE G+ +Q++GQ Sbjct: 258 HEEDGKEGQPEED-GKEI--HHEEDGKEGQPEEDGKEYLHEEDGEEGQPKEDQKEGQPEE 314 Query: 203 XXXXXXXXXXXXXXXEHADGAQPGQLDEDPGQEEEAEAAGRDVVERGDGVERDPLGCEED 24 DG + GQ ED G+E E G++ + DG E+D G +ED Sbjct: 315 DGKEDQP---------EEDGKE-GQCKED-GKEGHHEEGGKEDLHEEDGKEKD--GGKED 361 Query: 23 LDED 12 E+ Sbjct: 362 RKEE 365
>CRTC_HUMAN (P27797) Calreticulin precursor (CRP55) (Calregulin) (HACBP)| (ERp60) (grp60) Length = 417 Score = 30.8 bits (68), Expect = 2.1 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = -2 Query: 125 DEDPGQEEEAEAAGRDVVERGDGVERDPLGCEEDLDEDEPG 3 +ED ++EE EA ++ E D E D EED +ED PG Sbjct: 371 EEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEEDVPG 411
>WOX9_ARATH (Q6X7J4) WUSCHEL-related homeobox 9| Length = 378 Score = 30.4 bits (67), Expect = 2.7 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = -3 Query: 229 SKKTARLSANAQRELVPKTKKSGSNMPTARSLGSSTKTQGRKRKPRQ 89 SK RL N + +P+T+ P+A S SS+ + + KPR+ Sbjct: 111 SKHKLRLLHNHSKHSLPQTQPQPQPQPSASSSSSSSSSSSKSTKPRK 157
>AN32C_HUMAN (O43423) Acidic leucine-rich nuclear phosphoprotein 32 family| member C (Tumorigenic protein pp32r1) Length = 234 Score = 30.4 bits (67), Expect = 2.7 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 4/45 (8%) Frame = -2 Query: 125 DEDPGQEEEAEAAGRDVVERGDGVERDPLGCEEDL----DEDEPG 3 DE+ G+ EE VVE +G E + G EED+ +EDE G Sbjct: 165 DEEEGEHEEEYDEDAQVVEDEEGEEEEEEGEEEDVSGGDEEDEEG 209
>HUWE1_HUMAN (Q7Z6Z7) HECT, UBA and WWE domain-containing protein 1 (EC 6.3.2.-)| (E3 ubiquitin protein ligase URE-B1) (Mcl-1 ubiquitin ligase E3) (Mule) (ARF-binding protein 1) (ARF-BP1) Length = 4374 Score = 30.4 bits (67), Expect = 2.7 Identities = 24/101 (23%), Positives = 37/101 (36%) Frame = -2 Query: 308 GPGEGDEQPVLDDAGHVHGERGRLAHEQEDGQXXXXXXXXXXXXXXXXXXEHADGAQPGQ 129 G E E ++D+A + L +ED + Q Sbjct: 2373 GEDESQEDVLMDEAPSNLSQASTLQANREDSMNILDPEDEEEHTQEEDSSGSNEDEDDSQ 2432 Query: 128 LDEDPGQEEEAEAAGRDVVERGDGVERDPLGCEEDLDEDEP 6 +E+ +E+E + D E GD + D G E +LDED P Sbjct: 2433 DEEEEEEEDEEDDQEDDEGEEGDEDDDDD-GSEMELDEDYP 2472
>PTMS_BOVIN (P08814) Parathymosin| Length = 101 Score = 30.4 bits (67), Expect = 2.7 Identities = 17/39 (43%), Positives = 21/39 (53%) Frame = -2 Query: 125 DEDPGQEEEAEAAGRDVVERGDGVERDPLGCEEDLDEDE 9 +E+ G EEE E D E DG E D EE+ +EDE Sbjct: 39 EEENGAEEEEEETAEDGEEEDDGDEEDE---EEEEEEDE 74
>HUWE1_MOUSE (Q7TMY8) HECT, UBA and WWE domain-containing protein 1 (EC 6.3.2.-)| (E3 ubiquitin protein ligase URE-B1) (E3Histone) Length = 4377 Score = 30.4 bits (67), Expect = 2.7 Identities = 24/101 (23%), Positives = 37/101 (36%) Frame = -2 Query: 308 GPGEGDEQPVLDDAGHVHGERGRLAHEQEDGQXXXXXXXXXXXXXXXXXXEHADGAQPGQ 129 G E E ++D+A + L +ED + Q Sbjct: 2373 GEDESQEDVLMDEAPSNLSQASTLQANREDSMNILDPEDEEEHTQEEDSSGSNEDEDDSQ 2432 Query: 128 LDEDPGQEEEAEAAGRDVVERGDGVERDPLGCEEDLDEDEP 6 +E+ +E+E + D E GD + D G E +LDED P Sbjct: 2433 DEEEEEEEDEEDDQEDDEGEEGDEDDDDD-GSEMELDEDYP 2472
>BMS1_HUMAN (Q14692) Ribosome biogenesis protein BMS1 homolog| Length = 1282 Score = 30.4 bits (67), Expect = 2.7 Identities = 17/48 (35%), Positives = 26/48 (54%) Frame = -2 Query: 149 DGAQPGQLDEDPGQEEEAEAAGRDVVERGDGVERDPLGCEEDLDEDEP 6 DG + G DE+ +EE AE + + + G++R L EED + D P Sbjct: 454 DGLENGSSDEEAEEEENAEMTDQYMAVK--GIKRRKLELEEDSEMDLP 499
>IE68_PRVKA (P24827) Immediate-early protein RSP40| Length = 364 Score = 30.0 bits (66), Expect = 3.5 Identities = 32/121 (26%), Positives = 44/121 (36%), Gaps = 2/121 (1%) Frame = -2 Query: 365 QEGDPVAEEVDRGHRVPDHGPGEGDEQPVLDDAGHVHGERGRLAHEQEDGQXXXXXXXXX 186 +E +E + G D EGDE D + + ++EDG Sbjct: 217 EEDGEEEDEDEEGEEEEDEEEEEGDEDGETDV--YEEDDEAEDEEDEEDGDDF------- 267 Query: 185 XXXXXXXXXEHADGAQPGQLD--EDPGQEEEAEAAGRDVVERGDGVERDPLGCEEDLDED 12 DGA G D E P + E +G D + GDG + D +ED DED Sbjct: 268 ------------DGASVGDDDVFEPPEDGSDGEGSGSD--DGGDGEDEDE---DEDEDED 310 Query: 11 E 9 E Sbjct: 311 E 311
>PTMS_HUMAN (P20962) Parathymosin| Length = 101 Score = 30.0 bits (66), Expect = 3.5 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = -2 Query: 125 DEDPGQEEEAEAAGRDVVERGDGVERDPLGCEEDLDEDEPG 3 +E+ G EEE E D E +G E D EE+ +ED+ G Sbjct: 39 EEENGAEEEEEETAEDGEEEDEGEEED----EEEEEEDDEG 75
>FKBP3_YEAST (P38911) FK506-binding nuclear protein (EC 5.2.1.8)| (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Proline rotamase) (Nucleolar proline isomerase) (FKBP-70) Length = 411 Score = 29.6 bits (65), Expect = 4.6 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = -2 Query: 131 QLDEDPGQEEEAEAAGRDVVERGDGVERDPLGCEEDLDEDE 9 ++DE+ +EEE E + +G E + EED DED+ Sbjct: 75 EIDEESSEEEEEEKTQKKKKSKGKKAESESEDDEEDDDEDD 115
>OSA_DROSI (Q9N6K2) Trithorax group protein osa (Protein eyelid) (Fragment)| Length = 324 Score = 29.6 bits (65), Expect = 4.6 Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 5/94 (5%) Frame = -3 Query: 343 KRLIGVTVSRITDQEKAMSSQSLTTPATFMVSADVLPTSKKTAR-LSANAQRELVP---- 179 +RL+G+ +S I DQ+ A+ + + + VS P R L Q++L P Sbjct: 85 QRLLGLVMSHILDQQVAL----IISRVLYQVSRGTGPIHSVEFRLLQQRQQQQLRPGPAE 140 Query: 178 KTKKSGSNMPTARSLGSSTKTQGRKRKPRQQGAT 77 K S T ++ +ST+T + KP T Sbjct: 141 KQAASAGGSATVKAETASTETSSTEAKPAPAATT 174
>MAP1B_HUMAN (P46821) Microtubule-associated protein 1B (MAP 1B) [Contains: MAP1| light chain LC1] Length = 2468 Score = 29.6 bits (65), Expect = 4.6 Identities = 19/74 (25%), Positives = 36/74 (48%) Frame = -3 Query: 310 TDQEKAMSSQSLTTPATFMVSADVLPTSKKTARLSANAQRELVPKTKKSGSNMPTARSLG 131 T+ + ++S + TP TF ++ P+ ++ R + + + PKT KS + + RS Sbjct: 1584 TEVDDSLSVSVVQTPTTFQ-ETEMSPSKEECPRPMSISPPDFSPKTAKSRTPVQDHRSEQ 1642 Query: 130 SSTKTQGRKRKPRQ 89 SS + + P Q Sbjct: 1643 SSMSIEFGQESPEQ 1656
>A4_TETFL (O73683) Amyloid beta A4 protein precursor (APP) (ABPP) (Alzheimer| disease amyloid A4 A4 protein homolog) [Contains: Beta-amyloid protein (Beta-APP) (A-beta)] Length = 780 Score = 29.6 bits (65), Expect = 4.6 Identities = 18/40 (45%), Positives = 22/40 (55%) Frame = -2 Query: 125 DEDPGQEEEAEAAGRDVVERGDGVERDPLGCEEDLDEDEP 6 D+D EE+ EAA D E D E D G +D+D DEP Sbjct: 263 DQDGDGEEDHEAAD-DEEEEEDVDEIDAFGESDDVDADEP 301
>NOL7_MOUSE (Q9D7Z3) Nucleolar protein 7| Length = 254 Score = 29.6 bits (65), Expect = 4.6 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = -2 Query: 128 LDEDPGQEEEAEAA-GRDVVERGDGVERDPLGCEEDLDEDEP 6 +DED EE EA G + + G +PL EED D++ P Sbjct: 19 VDEDQAASEEEEAEHGLLLAQPSSGAAAEPLDEEEDADDEAP 60
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 29.6 bits (65), Expect = 4.6 Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 5/94 (5%) Frame = -3 Query: 343 KRLIGVTVSRITDQEKAMSSQSLTTPATFMVSADVLPTSKKTAR-LSANAQRELVP---- 179 +RL+G+ +S I DQ+ A+ + + + VS P R L Q++L P Sbjct: 2476 QRLLGLVMSHILDQQVAL----IISRVLYQVSRGTGPIHSVEFRLLQQRQQQQLRPGPAG 2531 Query: 178 KTKKSGSNMPTARSLGSSTKTQGRKRKPRQQGAT 77 K S T ++ +ST+T + KP T Sbjct: 2532 KQAASAGGSATVKAETASTETSSTEAKPAPAATT 2565
>CENPB_SHEEP (P49451) Major centromere autoantigen B (Centromere protein B)| (CENP-B) (Fragment) Length = 239 Score = 29.6 bits (65), Expect = 4.6 Identities = 32/121 (26%), Positives = 48/121 (39%), Gaps = 2/121 (1%) Frame = -2 Query: 365 QEGDPVAEEVDRGHRVPDHGPGE--GDEQPVLDDAGHVHGERGRLAHEQEDGQXXXXXXX 192 +EG+ EE + G + G GE G+E+ V ++ G V E+E+ + Sbjct: 59 EEGEGEEEEEEDGEEEEEAGEGEELGEEEEV-EEEGDVD------TVEEEEEEEEESSSE 111 Query: 191 XXXXXXXXXXXEHADGAQPGQLDEDPGQEEEAEAAGRDVVERGDGVERDPLGCEEDLDED 12 A G+ G G +EEA+ +E + E D EED DED Sbjct: 112 GLEAEDWAQGVVEAGGSFGGY-----GAQEEAQCPTLHFLEGEEDSESDSEEEEEDDDED 166 Query: 11 E 9 E Sbjct: 167 E 167 Score = 29.6 bits (65), Expect = 4.6 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = -2 Query: 134 GQLDEDPGQEEEAEAAGRDVVERGDGVERDPLGCEEDLDEDE 9 G+ +E+ +EEE E + E DG E + G E+L E+E Sbjct: 46 GEEEEEEEEEEEEEEGEGEEEEEEDGEEEEEAGEGEELGEEE 87
>NFM_BOVIN (O77788) Neurofilament triplet M protein (160 kDa neurofilament| protein) (Neurofilament medium polypeptide) (NF-M) Length = 925 Score = 29.3 bits (64), Expect = 6.0 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 3/49 (6%) Frame = -2 Query: 140 QPGQLDEDPGQEEEAE---AAGRDVVERGDGVERDPLGCEEDLDEDEPG 3 + G+ +E+ GQEEE E AA D E G G E++ +E+ +++E G Sbjct: 524 EEGEKEEEEGQEEEEEEEEAAKSDQAEEG-GSEKEGSSEKEEGEQEEEG 571
>PI3R5_HUMAN (Q8WYR1) Phosphoinositide 3-kinase regulatory subunit 5 (PI3-kinase| regulatory subunit 5) (PI3-kinase p101 subunit) (PtdIns-3-kinase p101) (p101-PI3K) (Phosphatidylinositol-4,5-bisphosphate 3-kinase regulatory subunit) (PtdIns-3-kinase regula Length = 880 Score = 29.3 bits (64), Expect = 6.0 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = -2 Query: 140 QPGQLDEDPGQEEEAEAAGRDVVERGDGVERDPL 39 QPG L +D +EEE E D+ G ERD L Sbjct: 313 QPGILGDDEEEEEEEEEVEEDLETDGHCAERDSL 346
>PYRR_BACSU (P39765) PyrR bifunctional protein [Includes: Pyrimidine operon| regulatory protein; Uracil phosphoribosyltransferase (EC 2.4.2.9) (UPRTase)] Length = 181 Score = 29.3 bits (64), Expect = 6.0 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Frame = -3 Query: 313 ITDQEKAMSSQSLTTPATFMVSADVL-----PTSKKTARLSANAQRELVPKTKKSGSNMP 149 ITDQ+ + L T T D L P+S + A L REL + G N+P Sbjct: 96 ITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRGHRELPIRADYIGKNIP 155 Query: 148 TARS 137 T++S Sbjct: 156 TSKS 159
>CENPB_CRIGR (P48988) Major centromere autoantigen B (Centromere protein B)| (CENP-B) Length = 606 Score = 29.3 bits (64), Expect = 6.0 Identities = 27/118 (22%), Positives = 43/118 (36%) Frame = -2 Query: 362 EGDPVAEEVDRGHRVPDHGPGEGDEQPVLDDAGHVHGERGRLAHEQEDGQXXXXXXXXXX 183 EG+ EE + G G G+E+ V ++ G+ E+E+ + Sbjct: 424 EGEEEEEEEEEGEEEGGEGEEVGEEEEVEEE-----GDESDEEEEEEEEEEEESSSEGLE 478 Query: 182 XXXXXXXXEHADGAQPGQLDEDPGQEEEAEAAGRDVVERGDGVERDPLGCEEDLDEDE 9 A G G +EEA+ +E G+ + D EED +EDE Sbjct: 479 AEDWAQGVVEASGGFGGY-----SVQEEAQCPTLHFLEGGEDSDSDSDEEEEDEEEDE 531 Score = 28.9 bits (63), Expect = 7.8 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = -2 Query: 140 QPGQLDEDPGQEEEAEAAGRDVVERGDGVERDPLGCEEDLDEDE 9 + G+ +E+ +EEE E G + E G+ E + G E D +E+E Sbjct: 421 EEGEGEEEEEEEEEGEEEGGEGEEVGEEEEVEEEGDESDEEEEE 464
>CENPB_MOUSE (P27790) Major centromere autoantigen B (Centromere protein B)| (CENP-B) Length = 599 Score = 29.3 bits (64), Expect = 6.0 Identities = 27/130 (20%), Positives = 48/130 (36%), Gaps = 5/130 (3%) Frame = -2 Query: 383 VVVAHAQEGDPVAEEVDRGHRVPDHGPGEGDEQPVLDDAGHVHGERGRLAHEQEDGQXXX 204 + + EG+ EE + + GEG+E+ ++ G G G E+E + Sbjct: 397 ITTSFKSEGEEEEEEEEEEEEEEEE-EGEGEEEEEEEEEGEEEGGEGEEEGEEEVEEEGE 455 Query: 203 XXXXXXXXXXXXXXXEHADGAQPGQLDEDPG-----QEEEAEAAGRDVVERGDGVERDPL 39 A+ G ++ G +EEA+ +E G+ + D Sbjct: 456 VDDSDEEEEESSSEGLEAEDWAQGVVEASGGFGGYSVQEEAQFPTLHFLEGGEDSDSDSD 515 Query: 38 GCEEDLDEDE 9 E+D +EDE Sbjct: 516 EEEDDEEEDE 525
>NSBP1_HUMAN (P82970) Nucleosome-binding protein 1| Length = 282 Score = 29.3 bits (64), Expect = 6.0 Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 5/126 (3%) Frame = -2 Query: 365 QEGDPVAEEVDRGHRVPDHGPGEGDEQPVLDDAGHVHG-ERGRLAHEQEDGQXXXXXXXX 189 +E D +E D+ + G + DE+ D +G E+G A E+EDG+ Sbjct: 126 EEEDQKEDEEDQNEEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDGKKGEDGKGN 185 Query: 188 XXXXXXXXXXEHADGAQP----GQLDEDPGQEEEAEAAGRDVVERGDGVERDPLGCEEDL 21 E + + G+ +ED G+E+ + G+DV + D ER+ +E Sbjct: 186 GEDGKEKGEDEKEEEDRKETGDGKENED-GKEKGDKKEGKDVKVKEDEKEREDGKEDEGG 244 Query: 20 DEDEPG 3 +E+E G Sbjct: 245 NEEEAG 250
>MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [Contains: MAP1| light chain LC2] Length = 2774 Score = 29.3 bits (64), Expect = 6.0 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 6/50 (12%) Frame = -2 Query: 134 GQLDED--PGQEEEA--EAAGRDVVERGDGVERD--PLGCEEDLDEDEPG 3 G LDE+ PG++++ E GRD+ E+ E D P E+DLD ++ G Sbjct: 1360 GALDEENKPGRQQDKTPEQKGRDLDEKDTAAELDKGPEPKEKDLDREDQG 1409
>RPA1_MOUSE (O35134) DNA-directed RNA polymerase I largest subunit (EC 2.7.7.6)| (RNA polymerase I 194 kDa subunit) (RPA194) Length = 1717 Score = 28.9 bits (63), Expect = 7.8 Identities = 23/97 (23%), Positives = 36/97 (37%), Gaps = 7/97 (7%) Frame = -2 Query: 275 DDAGHVHGERGRLAHEQEDGQXXXXXXXXXXXXXXXXXXEHADGAQPGQLDEDPGQEEEA 96 +D+G E R E+E+G + + E+ G+EEE Sbjct: 1388 EDSGRSQREEER--DEEEEGNIVDAEAEEGDADASDTKRKEKQEEEVDYESEEEGEEEEE 1445 Query: 95 EAAGRDVVERGDGV-------ERDPLGCEEDLDEDEP 6 E + +GDGV E + LG EE+ +P Sbjct: 1446 EEVQEEGNIKGDGVHQGHEPDEEEHLGLEEEESSQKP 1482
>FKBP5_SAIBB (Q9XSH5) FK506-binding protein 5 (EC 5.2.1.8) (Peptidyl-prolyl| cis-trans isomerase) (51 kDa FK506-binding immunophilin) (FKBP-51) Length = 457 Score = 28.9 bits (63), Expect = 7.8 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = -2 Query: 368 AQEGDPVAEEVDRGHRVPDHGPGEGDEQPVLDDAGHVHGERGRLAH 231 A++G+ V + DRG G G+E P++ D +VH G+LA+ Sbjct: 19 AEQGEDVTSKKDRGVLKIVKRVGHGEETPMIGDRVYVH-YNGKLAN 63
>TTLL4_MOUSE (Q80UG8) Tubulin--tyrosine ligase-like protein 4| Length = 1193 Score = 28.9 bits (63), Expect = 7.8 Identities = 16/58 (27%), Positives = 31/58 (53%) Frame = -3 Query: 292 MSSQSLTTPATFMVSADVLPTSKKTARLSANAQRELVPKTKKSGSNMPTARSLGSSTK 119 +SS+ +TP + A + P S+KT LS+ + ++K+S +P + G S++ Sbjct: 1118 LSSEDRSTPKSKKSQAGLSPISRKT--LSSRSNENTSKQSKRSTPGLPVLKYSGQSSR 1173
>LIPB_SHEON (Q8EHQ5) Lipoyltransferase (EC 2.3.1.-) (Lipoyl-[acyl-carrier| protein]-protein-N-lipoyltransferase) (Lipoate-protein ligase B) Length = 219 Score = 28.9 bits (63), Expect = 7.8 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = -2 Query: 359 GDPVAEEVDRGHRVPDHGPGEGDEQPVLD 273 GD +VDRG +V HGPG+ P+LD Sbjct: 64 GDIPVIQVDRGGQVTYHGPGQLVVYPLLD 92
>MYT1L_HUMAN (Q9UL68) Myelin transcription factor 1-like protein (MyT1L protein)| (MyT1-L) Length = 1186 Score = 28.9 bits (63), Expect = 7.8 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 5/52 (9%) Frame = -2 Query: 149 DGAQPGQLDE-----DPGQEEEAEAAGRDVVERGDGVERDPLGCEEDLDEDE 9 D +PG DE D +EEE E D E G+ VE + EE+ +E+E Sbjct: 113 DNDEPGDEDEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEEEEEEEEEEE 164
>YTDC1_HUMAN (Q96MU7) YTH domain-containing protein 1 (Putative splicing factor| YT521) Length = 727 Score = 28.9 bits (63), Expect = 7.8 Identities = 14/38 (36%), Positives = 23/38 (60%) Frame = -2 Query: 122 EDPGQEEEAEAAGRDVVERGDGVERDPLGCEEDLDEDE 9 E+ G + E ++G E+G+ E + G EED++EDE Sbjct: 177 EEYGSDHETGSSGSSD-EQGNNTENEEEGVEEDVEEDE 213
>RL18_CORGL (Q8NSX6) 50S ribosomal protein L18| Length = 134 Score = 28.9 bits (63), Expect = 7.8 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Frame = -2 Query: 368 AQEGDPVAEEVDRGHRVPDHGPGEGDEQPVLDDAGH-VHGERGRLAHEQEDG 216 A EGD A+ G + + G EQ V D AG+ HG LA +G Sbjct: 79 ATEGDKKAKGAKVGQLIAERAKAAGIEQVVFDRAGYKYHGRVAALADAAREG 130 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,188,406 Number of Sequences: 219361 Number of extensions: 766687 Number of successful extensions: 3906 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 3537 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3829 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
