ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags19j16 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190949.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1086 Score = 674 bits (340), Expect = 0.0 Identities = 448/484 (92%) Strand = Plus / Plus Query: 9 ctcgtcctcatccagatcctcctcacatccaaggggatctcgctcaaccccatcacctcg 68 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 583 ctcgtcctcatccagatcctcctcacctccaaggggatctcgctcaaccccatcacctcg 642 Query: 69 ctctactacgtcgcgccctgctgcctcggcttcctcttcctgccctgggtcttcgtcgag 128 ||||||||||||||||| |||||||||| ||||||| || | ||||||| |||||||||| Sbjct: 643 ctctactacgtcgcgccgtgctgcctcgccttcctcgtcattccctgggccttcgtcgag 702 Query: 129 ctgcccaggctgcgcgccgtcggcatgttcgagcccgacttcttcgtcttcggcaccaac 188 ||||||||||||||||||||||||| |||| |||| ||||||||| |||||||||||||| Sbjct: 703 ctgcccaggctgcgcgccgtcggcacgttccagccagacttcttcatcttcggcaccaac 762 Query: 189 tccctctgcgcgttcgcgctcaacctggccgtcttcttgctcgtgggcaagacgtccgcg 248 ||||| ||||| || |||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 763 tccctgtgcgcctttgcgctcaacctggcagtcttcttgctcgtcggcaagacgtccgcg 822 Query: 249 ctcaccatgaacgtggccggcgtcgtcaaggactggctgctcatcgccttctcctggtcc 308 || ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 823 cttaccatgaacgtcgccggcgtcgtcaaggattggctgctcatcgccttctcctggtct 882 Query: 309 gtgatccgggacacggtgaccccgatcaacctcttcggctacgggatcgccttcctgggc 368 ||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||| || Sbjct: 883 gtgatccgggacacggtcacgccgatcaacctgttcggctacgggatcgcattcctcggt 942 Query: 369 gtgggctactacaaccacgtcaagctgcaggcgctcaaggccaaggaggcgcagaagaag 428 || ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 943 gtaggctactacaaccacgtcaagcttcaggcgctcaaggcgaaggaggcgcagaagaag 1002 Query: 429 gtggcgcaggcggacgaggaggccggctcgctgctgcaggagcgcgactctcacggcgag 488 | || ||||| |||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 1003 gccgcacaggccgacgaggaggccggctcgctgctgcaggagcgtgactcgcacggcgaa 1062 Query: 489 cgca 492 |||| Sbjct: 1063 cgca 1066
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 674 bits (340), Expect = 0.0 Identities = 448/484 (92%) Strand = Plus / Minus Query: 9 ctcgtcctcatccagatcctcctcacatccaaggggatctcgctcaaccccatcacctcg 68 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 34011636 ctcgtcctcatccagatcctcctcacctccaaggggatctcgctcaaccccatcacctcg 34011577 Query: 69 ctctactacgtcgcgccctgctgcctcggcttcctcttcctgccctgggtcttcgtcgag 128 ||||||||||||||||| |||||||||| ||||||| || | ||||||| |||||||||| Sbjct: 34011576 ctctactacgtcgcgccgtgctgcctcgccttcctcgtcattccctgggccttcgtcgag 34011517 Query: 129 ctgcccaggctgcgcgccgtcggcatgttcgagcccgacttcttcgtcttcggcaccaac 188 ||||||||||||||||||||||||| |||| |||| ||||||||| |||||||||||||| Sbjct: 34011516 ctgcccaggctgcgcgccgtcggcacgttccagccagacttcttcatcttcggcaccaac 34011457 Query: 189 tccctctgcgcgttcgcgctcaacctggccgtcttcttgctcgtgggcaagacgtccgcg 248 ||||| ||||| || |||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 34011456 tccctgtgcgcctttgcgctcaacctggcagtcttcttgctcgtcggcaagacgtccgcg 34011397 Query: 249 ctcaccatgaacgtggccggcgtcgtcaaggactggctgctcatcgccttctcctggtcc 308 || ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 34011396 cttaccatgaacgtcgccggcgtcgtcaaggattggctgctcatcgccttctcctggtct 34011337 Query: 309 gtgatccgggacacggtgaccccgatcaacctcttcggctacgggatcgccttcctgggc 368 ||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||| || Sbjct: 34011336 gtgatccgggacacggtcacgccgatcaacctgttcggctacgggatcgcattcctcggt 34011277 Query: 369 gtgggctactacaaccacgtcaagctgcaggcgctcaaggccaaggaggcgcagaagaag 428 || ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 34011276 gtaggctactacaaccacgtcaagcttcaggcgctcaaggcgaaggaggcgcagaagaag 34011217 Query: 429 gtggcgcaggcggacgaggaggccggctcgctgctgcaggagcgcgactctcacggcgag 488 | || ||||| |||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 34011216 gccgcacaggccgacgaggaggccggctcgctgctgcaggagcgtgactcgcacggcgaa 34011157 Query: 489 cgca 492 |||| Sbjct: 34011156 cgca 34011153
>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034E02 Length = 165497 Score = 674 bits (340), Expect = 0.0 Identities = 448/484 (92%) Strand = Plus / Minus Query: 9 ctcgtcctcatccagatcctcctcacatccaaggggatctcgctcaaccccatcacctcg 68 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 8114 ctcgtcctcatccagatcctcctcacctccaaggggatctcgctcaaccccatcacctcg 8055 Query: 69 ctctactacgtcgcgccctgctgcctcggcttcctcttcctgccctgggtcttcgtcgag 128 ||||||||||||||||| |||||||||| ||||||| || | ||||||| |||||||||| Sbjct: 8054 ctctactacgtcgcgccgtgctgcctcgccttcctcgtcattccctgggccttcgtcgag 7995 Query: 129 ctgcccaggctgcgcgccgtcggcatgttcgagcccgacttcttcgtcttcggcaccaac 188 ||||||||||||||||||||||||| |||| |||| ||||||||| |||||||||||||| Sbjct: 7994 ctgcccaggctgcgcgccgtcggcacgttccagccagacttcttcatcttcggcaccaac 7935 Query: 189 tccctctgcgcgttcgcgctcaacctggccgtcttcttgctcgtgggcaagacgtccgcg 248 ||||| ||||| || |||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 7934 tccctgtgcgcctttgcgctcaacctggcagtcttcttgctcgtcggcaagacgtccgcg 7875 Query: 249 ctcaccatgaacgtggccggcgtcgtcaaggactggctgctcatcgccttctcctggtcc 308 || ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 7874 cttaccatgaacgtcgccggcgtcgtcaaggattggctgctcatcgccttctcctggtct 7815 Query: 309 gtgatccgggacacggtgaccccgatcaacctcttcggctacgggatcgccttcctgggc 368 ||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||| || Sbjct: 7814 gtgatccgggacacggtcacgccgatcaacctgttcggctacgggatcgcattcctcggt 7755 Query: 369 gtgggctactacaaccacgtcaagctgcaggcgctcaaggccaaggaggcgcagaagaag 428 || ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 7754 gtaggctactacaaccacgtcaagcttcaggcgctcaaggcgaaggaggcgcagaagaag 7695 Query: 429 gtggcgcaggcggacgaggaggccggctcgctgctgcaggagcgcgactctcacggcgag 488 | || ||||| |||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 7694 gccgcacaggccgacgaggaggccggctcgctgctgcaggagcgtgactcgcacggcgaa 7635 Query: 489 cgca 492 |||| Sbjct: 7634 cgca 7631
>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003D09 Length = 161970 Score = 674 bits (340), Expect = 0.0 Identities = 448/484 (92%) Strand = Plus / Minus Query: 9 ctcgtcctcatccagatcctcctcacatccaaggggatctcgctcaaccccatcacctcg 68 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 143079 ctcgtcctcatccagatcctcctcacctccaaggggatctcgctcaaccccatcacctcg 143020 Query: 69 ctctactacgtcgcgccctgctgcctcggcttcctcttcctgccctgggtcttcgtcgag 128 ||||||||||||||||| |||||||||| ||||||| || | ||||||| |||||||||| Sbjct: 143019 ctctactacgtcgcgccgtgctgcctcgccttcctcgtcattccctgggccttcgtcgag 142960 Query: 129 ctgcccaggctgcgcgccgtcggcatgttcgagcccgacttcttcgtcttcggcaccaac 188 ||||||||||||||||||||||||| |||| |||| ||||||||| |||||||||||||| Sbjct: 142959 ctgcccaggctgcgcgccgtcggcacgttccagccagacttcttcatcttcggcaccaac 142900 Query: 189 tccctctgcgcgttcgcgctcaacctggccgtcttcttgctcgtgggcaagacgtccgcg 248 ||||| ||||| || |||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 142899 tccctgtgcgcctttgcgctcaacctggcagtcttcttgctcgtcggcaagacgtccgcg 142840 Query: 249 ctcaccatgaacgtggccggcgtcgtcaaggactggctgctcatcgccttctcctggtcc 308 || ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 142839 cttaccatgaacgtcgccggcgtcgtcaaggattggctgctcatcgccttctcctggtct 142780 Query: 309 gtgatccgggacacggtgaccccgatcaacctcttcggctacgggatcgccttcctgggc 368 ||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||| || Sbjct: 142779 gtgatccgggacacggtcacgccgatcaacctgttcggctacgggatcgcattcctcggt 142720 Query: 369 gtgggctactacaaccacgtcaagctgcaggcgctcaaggccaaggaggcgcagaagaag 428 || ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 142719 gtaggctactacaaccacgtcaagcttcaggcgctcaaggcgaaggaggcgcagaagaag 142660 Query: 429 gtggcgcaggcggacgaggaggccggctcgctgctgcaggagcgcgactctcacggcgag 488 | || ||||| |||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 142659 gccgcacaggccgacgaggaggccggctcgctgctgcaggagcgtgactcgcacggcgaa 142600 Query: 489 cgca 492 |||| Sbjct: 142599 cgca 142596
>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03, complete sequence Length = 121466 Score = 533 bits (269), Expect = e-148 Identities = 419/469 (89%) Strand = Plus / Plus Query: 7 ggctcgtcctcatccagatcctcctcacatccaaggggatctcgctcaaccccatcacct 66 ||||||| |||||||||||||| ||||| |||||||| |||||||||||||| ||||||| Sbjct: 29282 ggctcgtgctcatccagatcctgctcacctccaagggcatctcgctcaacccaatcacct 29341 Query: 67 cgctctactacgtcgcgccctgctgcctcggcttcctcttcctgccctgggtcttcgtcg 126 | || |||||||||||||| ||||||||||||||||| || |||| ||||| ||||||| Sbjct: 29342 ctctgtactacgtcgcgccgtgctgcctcggcttcctgctcgtgccgtgggtgttcgtcg 29401 Query: 127 agctgcccaggctgcgcgccgtcggcatgttcgagcccgacttcttcgtcttcggcacca 186 ||||||||||||||||||||||||||| |||| || ||||||||||| ||||| |||| Sbjct: 29402 agctgcccaggctgcgcgccgtcggcacgttccgcccggacttcttcgtgttcgggacca 29461 Query: 187 actccctctgcgcgttcgcgctcaacctggccgtcttcttgctcgtgggcaagacgtccg 246 |||| |||||||| |||||||| || ||||| || ||||||||||| |||||||| |||| Sbjct: 29462 actcgctctgcgccttcgcgctgaatctggcggtgttcttgctcgtcggcaagacctccg 29521 Query: 247 cgctcaccatgaacgtggccggcgtcgtcaaggactggctgctcatcgccttctcctggt 306 |||||||||||||||| ||||| || ||||||||||||||||| ||||||||||| |||| Sbjct: 29522 cgctcaccatgaacgtcgccggggtggtcaaggactggctgctgatcgccttctcgtggt 29581 Query: 307 ccgtgatccgggacacggtgaccccgatcaacctcttcggctacgggatcgccttcctgg 366 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| ||| Sbjct: 29582 ccgtgatccgggacacggtcacgccgatcaacctgttcggctacgggatcgccttcttgg 29641 Query: 367 gcgtgggctactacaaccacgtcaagctgcaggcgctcaaggccaaggaggcgcagaaga 426 | |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 29642 gggtggcatactacaaccacgtcaagctgcaggcgctcaaggcgaaggaggcgcagaaga 29701 Query: 427 aggtggcgcaggcggacgaggaggccggctcgctgctgcaggagcgcga 475 || | ||||| || |||||||| ||||||||| ||||||||||||| Sbjct: 29702 agatcagccaggctgatgaggaggctggctcgctgttgcaggagcgcga 29750
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 533 bits (269), Expect = e-148 Identities = 419/469 (89%) Strand = Plus / Plus Query: 7 ggctcgtcctcatccagatcctcctcacatccaaggggatctcgctcaaccccatcacct 66 ||||||| |||||||||||||| ||||| |||||||| |||||||||||||| ||||||| Sbjct: 24143043 ggctcgtgctcatccagatcctgctcacctccaagggcatctcgctcaacccaatcacct 24143102 Query: 67 cgctctactacgtcgcgccctgctgcctcggcttcctcttcctgccctgggtcttcgtcg 126 | || |||||||||||||| ||||||||||||||||| || |||| ||||| ||||||| Sbjct: 24143103 ctctgtactacgtcgcgccgtgctgcctcggcttcctgctcgtgccgtgggtgttcgtcg 24143162 Query: 127 agctgcccaggctgcgcgccgtcggcatgttcgagcccgacttcttcgtcttcggcacca 186 ||||||||||||||||||||||||||| |||| || ||||||||||| ||||| |||| Sbjct: 24143163 agctgcccaggctgcgcgccgtcggcacgttccgcccggacttcttcgtgttcgggacca 24143222 Query: 187 actccctctgcgcgttcgcgctcaacctggccgtcttcttgctcgtgggcaagacgtccg 246 |||| |||||||| |||||||| || ||||| || ||||||||||| |||||||| |||| Sbjct: 24143223 actcgctctgcgccttcgcgctgaatctggcggtgttcttgctcgtcggcaagacctccg 24143282 Query: 247 cgctcaccatgaacgtggccggcgtcgtcaaggactggctgctcatcgccttctcctggt 306 |||||||||||||||| ||||| || ||||||||||||||||| ||||||||||| |||| Sbjct: 24143283 cgctcaccatgaacgtcgccggggtggtcaaggactggctgctgatcgccttctcgtggt 24143342 Query: 307 ccgtgatccgggacacggtgaccccgatcaacctcttcggctacgggatcgccttcctgg 366 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| ||| Sbjct: 24143343 ccgtgatccgggacacggtcacgccgatcaacctgttcggctacgggatcgccttcttgg 24143402 Query: 367 gcgtgggctactacaaccacgtcaagctgcaggcgctcaaggccaaggaggcgcagaaga 426 | |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 24143403 gggtggcatactacaaccacgtcaagctgcaggcgctcaaggcgaaggaggcgcagaaga 24143462 Query: 427 aggtggcgcaggcggacgaggaggccggctcgctgctgcaggagcgcga 475 || | ||||| || |||||||| ||||||||| ||||||||||||| Sbjct: 24143463 agatcagccaggctgatgaggaggctggctcgctgttgcaggagcgcga 24143511
>dbj|AK071846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120O09, full insert sequence Length = 1576 Score = 533 bits (269), Expect = e-148 Identities = 419/469 (89%) Strand = Plus / Plus Query: 7 ggctcgtcctcatccagatcctcctcacatccaaggggatctcgctcaaccccatcacct 66 ||||||| |||||||||||||| ||||| |||||||| |||||||||||||| ||||||| Sbjct: 660 ggctcgtgctcatccagatcctgctcacctccaagggcatctcgctcaacccaatcacct 719 Query: 67 cgctctactacgtcgcgccctgctgcctcggcttcctcttcctgccctgggtcttcgtcg 126 | || |||||||||||||| ||||||||||||||||| || |||| ||||| ||||||| Sbjct: 720 ctctgtactacgtcgcgccgtgctgcctcggcttcctgctcgtgccgtgggtgttcgtcg 779 Query: 127 agctgcccaggctgcgcgccgtcggcatgttcgagcccgacttcttcgtcttcggcacca 186 ||||||||||||||||||||||||||| |||| || ||||||||||| ||||| |||| Sbjct: 780 agctgcccaggctgcgcgccgtcggcacgttccgcccggacttcttcgtgttcgggacca 839 Query: 187 actccctctgcgcgttcgcgctcaacctggccgtcttcttgctcgtgggcaagacgtccg 246 |||| |||||||| |||||||| || ||||| || ||||||||||| |||||||| |||| Sbjct: 840 actcgctctgcgccttcgcgctgaatctggcggtgttcttgctcgtcggcaagacctccg 899 Query: 247 cgctcaccatgaacgtggccggcgtcgtcaaggactggctgctcatcgccttctcctggt 306 |||||||||||||||| ||||| || ||||||||||||||||| ||||||||||| |||| Sbjct: 900 cgctcaccatgaacgtcgccggggtggtcaaggactggctgctgatcgccttctcgtggt 959 Query: 307 ccgtgatccgggacacggtgaccccgatcaacctcttcggctacgggatcgccttcctgg 366 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| ||| Sbjct: 960 ccgtgatccgggacacggtcacgccgatcaacctgttcggctacgggatcgccttcttgg 1019 Query: 367 gcgtgggctactacaaccacgtcaagctgcaggcgctcaaggccaaggaggcgcagaaga 426 | |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1020 gggtggcatactacaaccacgtcaagctgcaggcgctcaaggcgaaggaggcgcagaaga 1079 Query: 427 aggtggcgcaggcggacgaggaggccggctcgctgctgcaggagcgcga 475 || | ||||| || |||||||| ||||||||| ||||||||||||| Sbjct: 1080 agatcagccaggctgatgaggaggctggctcgctgttgcaggagcgcga 1128
>dbj|AK059987.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-H01, full insert sequence Length = 1312 Score = 533 bits (269), Expect = e-148 Identities = 419/469 (89%) Strand = Plus / Plus Query: 7 ggctcgtcctcatccagatcctcctcacatccaaggggatctcgctcaaccccatcacct 66 ||||||| |||||||||||||| ||||| |||||||| |||||||||||||| ||||||| Sbjct: 650 ggctcgtgctcatccagatcctgctcacctccaagggcatctcgctcaacccaatcacct 709 Query: 67 cgctctactacgtcgcgccctgctgcctcggcttcctcttcctgccctgggtcttcgtcg 126 | || |||||||||||||| ||||||||||||||||| || |||| ||||| ||||||| Sbjct: 710 ctctgtactacgtcgcgccgtgctgcctcggcttcctgctcgtgccgtgggtgttcgtcg 769 Query: 127 agctgcccaggctgcgcgccgtcggcatgttcgagcccgacttcttcgtcttcggcacca 186 ||||||||||||||||||||||||||| |||| || ||||||||||| ||||| |||| Sbjct: 770 agctgcccaggctgcgcgccgtcggcacgttccgcccggacttcttcgtgttcgggacca 829 Query: 187 actccctctgcgcgttcgcgctcaacctggccgtcttcttgctcgtgggcaagacgtccg 246 |||| |||||||| |||||||| || ||||| || ||||||||||| |||||||| |||| Sbjct: 830 actcgctctgcgccttcgcgctgaatctggcggtgttcttgctcgtcggcaagacctccg 889 Query: 247 cgctcaccatgaacgtggccggcgtcgtcaaggactggctgctcatcgccttctcctggt 306 |||||||||||||||| ||||| || ||||||||||||||||| ||||||||||| |||| Sbjct: 890 cgctcaccatgaacgtcgccggggtggtcaaggactggctgctgatcgccttctcgtggt 949 Query: 307 ccgtgatccgggacacggtgaccccgatcaacctcttcggctacgggatcgccttcctgg 366 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||| ||| Sbjct: 950 ccgtgatccgggacacggtcacgccgatcaacctgttcggctacgggatcgccttcttgg 1009 Query: 367 gcgtgggctactacaaccacgtcaagctgcaggcgctcaaggccaaggaggcgcagaaga 426 | |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1010 gggtggcatactacaaccacgtcaagctgcaggcgctcaaggcgaaggaggcgcagaaga 1069 Query: 427 aggtggcgcaggcggacgaggaggccggctcgctgctgcaggagcgcga 475 || | ||||| || |||||||| ||||||||| ||||||||||||| Sbjct: 1070 agatcagccaggctgatgaggaggctggctcgctgttgcaggagcgcga 1118
>gb|AY109497.1| Zea mays CL2656_1 mRNA sequence Length = 927 Score = 496 bits (250), Expect = e-137 Identities = 352/387 (90%), Gaps = 3/387 (0%) Strand = Plus / Minus Query: 109 tgccctgggtcttcgtcgagctgcccaggctgcgcgccgtcg---gcatgttcgagcccg 165 ||||||||||||||||||||||||||||||| |||||||||| || ||| |||| | Sbjct: 691 tgccctgggtcttcgtcgagctgcccaggctacgcgccgtcgccggcggcttccagccgg 632 Query: 166 acttcttcgtcttcggcaccaactccctctgcgcgttcgcgctcaacctggccgtcttct 225 || ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 631 acctcttcgtcttcggcaccaactccctctgcgccttcgcgctcaacctcgccgtcttcc 572 Query: 226 tgctcgtgggcaagacgtccgcgctcaccatgaacgtggccggcgtcgtcaaggactggc 285 ||||||| ||||||||||| || |||||||||||||| |||||||||||||||||||||| Sbjct: 571 tgctcgtcggcaagacgtcggccctcaccatgaacgtcgccggcgtcgtcaaggactggc 512 Query: 286 tgctcatcgccttctcctggtccgtgatccgggacacggtgaccccgatcaacctcttcg 345 ||||||||||||||||||||||||| ||||| ||||| || | |||||||||||| Sbjct: 511 tgctcatcgccttctcctggtccgtcatccgcgacaccgtcannnnngtcaacctcttcg 452 Query: 346 gctacgggatcgccttcctgggcgtgggctactacaaccacgtcaagctgcaggcgctca 405 ||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||| Sbjct: 451 gctacgggatcgccttcctcggggtgggatactacaaccacgtcaagctgcaggcgctca 392 Query: 406 aggccaaggaggcgcagaagaaggtggcgcaggcggacgaggaggccggctcgctgctgc 465 |||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||| Sbjct: 391 aggccaaggaggcgcagaagaaggcggcgcaggccgacgaggaggccgggtcgctgctgc 332 Query: 466 aggagcgcgactctcacggcgagcgca 492 ||||||||||||| |||||||| |||| Sbjct: 331 aggagcgcgactcgcacggcgaccgca 305 Score = 123 bits (62), Expect = 6e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 9 ctcgtcctcatccagatcctcctcacatccaaggggatctcgctcaaccccatcacctcg 68 |||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||| Sbjct: 791 ctcgtcctcatccagatcctcctcacctctaagggcatctcgctcaaccccatcacctcg 732 Query: 69 ctctactacgtcgc 82 |||||||||||||| Sbjct: 731 ctctactacgtcgc 718
>gb|AY105280.1| Zea mays PCO151044 mRNA sequence Length = 1004 Score = 398 bits (201), Expect = e-108 Identities = 402/469 (85%) Strand = Plus / Plus Query: 7 ggctcgtcctcatccagatcctcctcacatccaaggggatctcgctcaaccccatcacct 66 ||||||| |||||||||||||| ||||| |||||||| |||||||||||||| ||||||| Sbjct: 145 ggctcgtgctcatccagatcctgctcacgtccaagggcatctcgctcaaccctatcacct 204 Query: 67 cgctctactacgtcgcgccctgctgcctcggcttcctcttcctgccctgggtcttcgtcg 126 |||||||||| |||||||| |||||| || |||||||| || ||||||||| |||||||| Sbjct: 205 cgctctactatgtcgcgccgtgctgcttctgcttcctcctcgtgccctgggccttcgtcg 264 Query: 127 agctgcccaggctgcgcgccgtcggcatgttcgagcccgacttcttcgtcttcggcacca 186 ||||||||||||||||||||||||| | ||| | || || || |||||||| || || | Sbjct: 265 agctgcccaggctgcgcgccgtcggtaccttccaaccggattttttcgtctttgggacga 324 Query: 187 actccctctgcgcgttcgcgctcaacctggccgtcttcttgctcgtgggcaagacgtccg 246 |||| |||||||| || ||||||||||| ||||||||| |||| || |||||||| || | Sbjct: 325 actcactctgcgcctttgcgctcaaccttgccgtcttcctgctggtcggcaagacctcgg 384 Query: 247 cgctcaccatgaacgtggccggcgtcgtcaaggactggctgctcatcgccttctcctggt 306 |||| ||||||||||| || || || ||||||||||||||| | || |||||||| |||| Sbjct: 385 cgctgaccatgaacgtcgcgggagtagtcaaggactggctgttgattgccttctcgtggt 444 Query: 307 ccgtgatccgggacacggtgaccccgatcaacctcttcggctacgggatcgccttcctgg 366 | |||||||| ||||| || || ||||||||||| ||||| ||||||||||| || | | Sbjct: 445 ctgtgatccgtgacaccgtcacaccgatcaacctgttcgggtacgggatcgcgtttttag 504 Query: 367 gcgtgggctactacaaccacgtcaagctgcaggcgctcaaggccaaggaggcgcagaaga 426 | |||||||||||||| || ||||||||||||||||||||||| |||||||| ||||||| Sbjct: 505 gggtgggctactacaatcatgtcaagctgcaggcgctcaaggctaaggaggcacagaaga 564 Query: 427 aggtggcgcaggcggacgaggaggccggctcgctgctgcaggagcgcga 475 | | | ||||| || ||||||||||| ||||| ||||||||||||| Sbjct: 565 aagccacacaggctgatgaggaggccgggtcgctcttgcaggagcgcga 613
>gb|BT017000.1| Zea mays clone EK07D2309E12.c mRNA sequence Length = 778 Score = 325 bits (164), Expect = 8e-86 Identities = 350/412 (84%) Strand = Plus / Plus Query: 64 cctcgctctactacgtcgcgccctgctgcctcggcttcctcttcctgccctgggtcttcg 123 ||||||||||||| |||||||| |||||| || |||||||| || ||||||||| ||||| Sbjct: 10 cctcgctctactatgtcgcgccgtgctgcttctgcttcctcctcgtgccctgggccttcg 69 Query: 124 tcgagctgcccaggctgcgcgccgtcggcatgttcgagcccgacttcttcgtcttcggca 183 |||||||||||||||||||||||||||| | ||| | || || || |||||||| || | Sbjct: 70 tcgagctgcccaggctgcgcgccgtcggtaccttccaaccggattttttcgtctttggga 129 Query: 184 ccaactccctctgcgcgttcgcgctcaacctggccgtcttcttgctcgtgggcaagacgt 243 | ||||| |||||||| || ||||||||||| ||||||||| |||| || |||||||| | Sbjct: 130 cgaactcactctgcgcctttgcgctcaaccttgccgtcttcctgctggtcggcaagacct 189 Query: 244 ccgcgctcaccatgaacgtggccggcgtcgtcaaggactggctgctcatcgccttctcct 303 | ||||| ||||||||||| || || || ||||||||||||||| | || |||||||| | Sbjct: 190 cggcgctgaccatgaacgtcgcgggagtagtcaaggactggctgttgattgccttctcgt 249 Query: 304 ggtccgtgatccgggacacggtgaccccgatcaacctcttcggctacgggatcgccttcc 363 |||| |||||||| ||||| || || ||||||||||| ||||| ||||||||||| || Sbjct: 250 ggtctgtgatccgtgacaccgtcacaccgatcaacctgttcgggtacgggatcgcgtttt 309 Query: 364 tgggcgtgggctactacaaccacgtcaagctgcaggcgctcaaggccaaggaggcgcaga 423 | || |||||||||||||| || ||||||||||||||||||||||| |||||||| |||| Sbjct: 310 taggggtgggctactacaatcatgtcaagctgcaggcgctcaaggctaaggaggcacaga 369 Query: 424 agaaggtggcgcaggcggacgaggaggccggctcgctgctgcaggagcgcga 475 |||| | | ||||| || ||||||||||| ||||| ||||||||||||| Sbjct: 370 agaaagccacacaggctgatgaggaggccgggtcgctcttgcaggagcgcga 421
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 250 bits (126), Expect = 4e-63 Identities = 225/258 (87%) Strand = Plus / Plus Query: 161 gcccgacttcttcgtcttcggcaccaactccctctgcgcgttcgcgctcaacctggccgt 220 ||||||| | ||||| ||||| || ||||| || ||||||||||||||||||||||| || Sbjct: 30461 gcccgacgtgttcgtgttcgggacgaactcgctgtgcgcgttcgcgctcaacctggcggt 30520 Query: 221 cttcttgctcgtgggcaagacgtccgcgctcaccatgaacgtggccggcgtcgtcaagga 280 ||| |||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 30521 gttcctgctggtggggaagacgtcggcgctgaccatgaacgtggccggcgtcgtcaagga 30580 Query: 281 ctggctgctcatcgccttctcctggtccgtgatccgggacacggtgaccccgatcaacct 340 ||||||||||||||||||||||||| | |||||| |||||| || || ||| ||||||| Sbjct: 30581 ctggctgctcatcgccttctcctggacagtgatcaaggacaccgtcacgccggtcaacct 30640 Query: 341 cttcggctacgggatcgccttcctgggcgtgggctactacaaccacgtcaagctgcaggc 400 | ||||||| || || |||||||| ||||| | |||||||||||| | ||||||||||| Sbjct: 30641 cgtcggctatggcattgccttcctcggcgtcgcctactacaaccatgccaagctgcaggg 30700 Query: 401 gctcaaggccaaggaggc 418 ||||||||||| |||||| Sbjct: 30701 gctcaaggccagggaggc 30718 Score = 113 bits (57), Expect = 6e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 7 ggctcgtcctcatccagatcctcctcacatccaaggggatctcgctcaaccccatcacct 66 ||||||| ||||||||||| || ||||| |||||||| || ||||| ||||||||||||| Sbjct: 30301 ggctcgtgctcatccagatactgctcacctccaagggcatgtcgctgaaccccatcacct 30360 Query: 67 cgctctactacgtcgcgccctgctgcctcggcttcctcttcctgccctgggtcttcgtcg 126 ||||||||||| ||||||| |||||||||| ||| | ||||| ||| |||||||| Sbjct: 30361 cgctctactacatcgcgccgtgctgcctcgtgttcttgacgctgccatggtacttcgtcg 30420 Query: 127 agctgcccaggctgcgcgccg 147 ||||||| |||||||||||| Sbjct: 30421 agctgccgcggctgcgcgccg 30441
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 250 bits (126), Expect = 4e-63 Identities = 225/258 (87%) Strand = Plus / Plus Query: 161 gcccgacttcttcgtcttcggcaccaactccctctgcgcgttcgcgctcaacctggccgt 220 ||||||| | ||||| ||||| || ||||| || ||||||||||||||||||||||| || Sbjct: 1751701 gcccgacgtgttcgtgttcgggacgaactcgctgtgcgcgttcgcgctcaacctggcggt 1751760 Query: 221 cttcttgctcgtgggcaagacgtccgcgctcaccatgaacgtggccggcgtcgtcaagga 280 ||| |||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 1751761 gttcctgctggtggggaagacgtcggcgctgaccatgaacgtggccggcgtcgtcaagga 1751820 Query: 281 ctggctgctcatcgccttctcctggtccgtgatccgggacacggtgaccccgatcaacct 340 ||||||||||||||||||||||||| | |||||| |||||| || || ||| ||||||| Sbjct: 1751821 ctggctgctcatcgccttctcctggacagtgatcaaggacaccgtcacgccggtcaacct 1751880 Query: 341 cttcggctacgggatcgccttcctgggcgtgggctactacaaccacgtcaagctgcaggc 400 | ||||||| || || |||||||| ||||| | |||||||||||| | ||||||||||| Sbjct: 1751881 cgtcggctatggcattgccttcctcggcgtcgcctactacaaccatgccaagctgcaggg 1751940 Query: 401 gctcaaggccaaggaggc 418 ||||||||||| |||||| Sbjct: 1751941 gctcaaggccagggaggc 1751958 Score = 113 bits (57), Expect = 6e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 7 ggctcgtcctcatccagatcctcctcacatccaaggggatctcgctcaaccccatcacct 66 ||||||| ||||||||||| || ||||| |||||||| || ||||| ||||||||||||| Sbjct: 1751541 ggctcgtgctcatccagatactgctcacctccaagggcatgtcgctgaaccccatcacct 1751600 Query: 67 cgctctactacgtcgcgccctgctgcctcggcttcctcttcctgccctgggtcttcgtcg 126 ||||||||||| ||||||| |||||||||| ||| | ||||| ||| |||||||| Sbjct: 1751601 cgctctactacatcgcgccgtgctgcctcgtgttcttgacgctgccgtggtacttcgtcg 1751660 Query: 127 agctgcccaggctgcgcgccg 147 ||||||| |||||||||||| Sbjct: 1751661 agctgccgcggctgcgcgccg 1751681
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 250 bits (126), Expect = 4e-63 Identities = 225/258 (87%) Strand = Plus / Plus Query: 161 gcccgacttcttcgtcttcggcaccaactccctctgcgcgttcgcgctcaacctggccgt 220 ||||||| | ||||| ||||| || ||||| || ||||||||||||||||||||||| || Sbjct: 1812631 gcccgacgtgttcgtgttcgggacgaactcgctgtgcgcgttcgcgctcaacctggcggt 1812690 Query: 221 cttcttgctcgtgggcaagacgtccgcgctcaccatgaacgtggccggcgtcgtcaagga 280 ||| |||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 1812691 gttcctgctggtggggaagacgtcggcgctgaccatgaacgtggccggcgtcgtcaagga 1812750 Query: 281 ctggctgctcatcgccttctcctggtccgtgatccgggacacggtgaccccgatcaacct 340 ||||||||||||||||||||||||| | |||||| |||||| || || ||| ||||||| Sbjct: 1812751 ctggctgctcatcgccttctcctggacagtgatcaaggacaccgtcacgccggtcaacct 1812810 Query: 341 cttcggctacgggatcgccttcctgggcgtgggctactacaaccacgtcaagctgcaggc 400 | ||||||| || || |||||||| ||||| | |||||||||||| | ||||||||||| Sbjct: 1812811 cgtcggctatggcattgccttcctcggcgtcgcctactacaaccatgccaagctgcaggg 1812870 Query: 401 gctcaaggccaaggaggc 418 ||||||||||| |||||| Sbjct: 1812871 gctcaaggccagggaggc 1812888 Score = 113 bits (57), Expect = 6e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 7 ggctcgtcctcatccagatcctcctcacatccaaggggatctcgctcaaccccatcacct 66 ||||||| ||||||||||| || ||||| |||||||| || ||||| ||||||||||||| Sbjct: 1812471 ggctcgtgctcatccagatactgctcacctccaagggcatgtcgctgaaccccatcacct 1812530 Query: 67 cgctctactacgtcgcgccctgctgcctcggcttcctcttcctgccctgggtcttcgtcg 126 ||||||||||| ||||||| |||||||||| ||| | ||||| ||| |||||||| Sbjct: 1812531 cgctctactacatcgcgccgtgctgcctcgtgttcttgacgctgccatggtacttcgtcg 1812590 Query: 127 agctgcccaggctgcgcgccg 147 ||||||| |||||||||||| Sbjct: 1812591 agctgccgcggctgcgcgccg 1812611 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 209 caacctggccgtcttcttgctcgtgggc 236 |||||||||| ||||||||||| ||||| Sbjct: 16576981 caacctggccttcttcttgctcttgggc 16576954
>dbj|AK107562.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-B12, full insert sequence Length = 1589 Score = 250 bits (126), Expect = 4e-63 Identities = 225/258 (87%) Strand = Plus / Plus Query: 161 gcccgacttcttcgtcttcggcaccaactccctctgcgcgttcgcgctcaacctggccgt 220 ||||||| | ||||| ||||| || ||||| || ||||||||||||||||||||||| || Sbjct: 892 gcccgacgtgttcgtgttcgggacgaactcgctgtgcgcgttcgcgctcaacctggcggt 951 Query: 221 cttcttgctcgtgggcaagacgtccgcgctcaccatgaacgtggccggcgtcgtcaagga 280 ||| |||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 952 gttcctgctggtggggaagacgtcggcgctgaccatgaacgtggccggcgtcgtcaagga 1011 Query: 281 ctggctgctcatcgccttctcctggtccgtgatccgggacacggtgaccccgatcaacct 340 ||||||||||||||||||||||||| | |||||| |||||| || || ||| ||||||| Sbjct: 1012 ctggctgctcatcgccttctcctggacagtgatcaaggacaccgtcacgccggtcaacct 1071 Query: 341 cttcggctacgggatcgccttcctgggcgtgggctactacaaccacgtcaagctgcaggc 400 | ||||||| || || |||||||| ||||| | |||||||||||| | ||||||||||| Sbjct: 1072 cgtcggctatggcattgccttcctcggcgtcgcctactacaaccatgccaagctgcaggg 1131 Query: 401 gctcaaggccaaggaggc 418 ||||||||||| |||||| Sbjct: 1132 gctcaaggccagggaggc 1149 Score = 113 bits (57), Expect = 6e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 7 ggctcgtcctcatccagatcctcctcacatccaaggggatctcgctcaaccccatcacct 66 ||||||| ||||||||||| || ||||| |||||||| || ||||| ||||||||||||| Sbjct: 732 ggctcgtgctcatccagatactgctcacctccaagggcatgtcgctgaaccccatcacct 791 Query: 67 cgctctactacgtcgcgccctgctgcctcggcttcctcttcctgccctgggtcttcgtcg 126 ||||||||||| ||||||| |||||||||| ||| | ||||| ||| |||||||| Sbjct: 792 cgctctactacatcgcgccgtgctgcctcgtgttcttgacgctgccatggtacttcgtcg 851 Query: 127 agctgcccaggctgcgcgccg 147 ||||||| |||||||||||| Sbjct: 852 agctgccgcggctgcgcgccg 872
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 250 bits (126), Expect = 4e-63 Identities = 225/258 (87%) Strand = Plus / Plus Query: 161 gcccgacttcttcgtcttcggcaccaactccctctgcgcgttcgcgctcaacctggccgt 220 ||||||| | ||||| ||||| || ||||| || ||||||||||||||||||||||| || Sbjct: 1810352 gcccgacgtgttcgtgttcgggacgaactcgctgtgcgcgttcgcgctcaacctggcggt 1810411 Query: 221 cttcttgctcgtgggcaagacgtccgcgctcaccatgaacgtggccggcgtcgtcaagga 280 ||| |||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 1810412 gttcctgctggtggggaagacgtcggcgctgaccatgaacgtggccggcgtcgtcaagga 1810471 Query: 281 ctggctgctcatcgccttctcctggtccgtgatccgggacacggtgaccccgatcaacct 340 ||||||||||||||||||||||||| | |||||| |||||| || || ||| ||||||| Sbjct: 1810472 ctggctgctcatcgccttctcctggacagtgatcaaggacaccgtcacgccggtcaacct 1810531 Query: 341 cttcggctacgggatcgccttcctgggcgtgggctactacaaccacgtcaagctgcaggc 400 | ||||||| || || |||||||| ||||| | |||||||||||| | ||||||||||| Sbjct: 1810532 cgtcggctatggcattgccttcctcggcgtcgcctactacaaccatgccaagctgcaggg 1810591 Query: 401 gctcaaggccaaggaggc 418 ||||||||||| |||||| Sbjct: 1810592 gctcaaggccagggaggc 1810609 Score = 113 bits (57), Expect = 6e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 7 ggctcgtcctcatccagatcctcctcacatccaaggggatctcgctcaaccccatcacct 66 ||||||| ||||||||||| || ||||| |||||||| || ||||| ||||||||||||| Sbjct: 1810192 ggctcgtgctcatccagatactgctcacctccaagggcatgtcgctgaaccccatcacct 1810251 Query: 67 cgctctactacgtcgcgccctgctgcctcggcttcctcttcctgccctgggtcttcgtcg 126 ||||||||||| ||||||| |||||||||| ||| | ||||| ||| |||||||| Sbjct: 1810252 cgctctactacatcgcgccgtgctgcctcgtgttcttgacgctgccatggtacttcgtcg 1810311 Query: 127 agctgcccaggctgcgcgccg 147 ||||||| |||||||||||| Sbjct: 1810312 agctgccgcggctgcgcgccg 1810332
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 250 bits (126), Expect = 4e-63 Identities = 225/258 (87%) Strand = Plus / Plus Query: 161 gcccgacttcttcgtcttcggcaccaactccctctgcgcgttcgcgctcaacctggccgt 220 ||||||| | ||||| ||||| || ||||| || ||||||||||||||||||||||| || Sbjct: 1751678 gcccgacgtgttcgtgttcgggacgaactcgctgtgcgcgttcgcgctcaacctggcggt 1751737 Query: 221 cttcttgctcgtgggcaagacgtccgcgctcaccatgaacgtggccggcgtcgtcaagga 280 ||| |||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 1751738 gttcctgctggtggggaagacgtcggcgctgaccatgaacgtggccggcgtcgtcaagga 1751797 Query: 281 ctggctgctcatcgccttctcctggtccgtgatccgggacacggtgaccccgatcaacct 340 ||||||||||||||||||||||||| | |||||| |||||| || || ||| ||||||| Sbjct: 1751798 ctggctgctcatcgccttctcctggacagtgatcaaggacaccgtcacgccggtcaacct 1751857 Query: 341 cttcggctacgggatcgccttcctgggcgtgggctactacaaccacgtcaagctgcaggc 400 | ||||||| || || |||||||| ||||| | |||||||||||| | ||||||||||| Sbjct: 1751858 cgtcggctatggcattgccttcctcggcgtcgcctactacaaccatgccaagctgcaggg 1751917 Query: 401 gctcaaggccaaggaggc 418 ||||||||||| |||||| Sbjct: 1751918 gctcaaggccagggaggc 1751935 Score = 113 bits (57), Expect = 6e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 7 ggctcgtcctcatccagatcctcctcacatccaaggggatctcgctcaaccccatcacct 66 ||||||| ||||||||||| || ||||| |||||||| || ||||| ||||||||||||| Sbjct: 1751518 ggctcgtgctcatccagatactgctcacctccaagggcatgtcgctgaaccccatcacct 1751577 Query: 67 cgctctactacgtcgcgccctgctgcctcggcttcctcttcctgccctgggtcttcgtcg 126 ||||||||||| ||||||| |||||||||| ||| | ||||| ||| |||||||| Sbjct: 1751578 cgctctactacatcgcgccgtgctgcctcgtgttcttgacgctgccgtggtacttcgtcg 1751637 Query: 127 agctgcccaggctgcgcgccg 147 ||||||| |||||||||||| Sbjct: 1751638 agctgccgcggctgcgcgccg 1751658
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 250 bits (126), Expect = 4e-63 Identities = 225/258 (87%) Strand = Plus / Minus Query: 161 gcccgacttcttcgtcttcggcaccaactccctctgcgcgttcgcgctcaacctggccgt 220 ||||||| | ||||| ||||| || ||||| || ||||||||||||||||||||||| || Sbjct: 88782 gcccgacgtgttcgtgttcgggacgaactcgctgtgcgcgttcgcgctcaacctggcggt 88723 Query: 221 cttcttgctcgtgggcaagacgtccgcgctcaccatgaacgtggccggcgtcgtcaagga 280 ||| |||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 88722 gttcctgctggtggggaagacgtcggcgctgaccatgaacgtggccggcgtcgtcaagga 88663 Query: 281 ctggctgctcatcgccttctcctggtccgtgatccgggacacggtgaccccgatcaacct 340 ||||||||||||||||||||||||| | |||||| |||||| || || ||| ||||||| Sbjct: 88662 ctggctgctcatcgccttctcctggacagtgatcaaggacaccgtcacgccggtcaacct 88603 Query: 341 cttcggctacgggatcgccttcctgggcgtgggctactacaaccacgtcaagctgcaggc 400 | ||||||| || || |||||||| ||||| | |||||||||||| | ||||||||||| Sbjct: 88602 cgtcggctatggcattgccttcctcggcgtcgcctactacaaccatgccaagctgcaggg 88543 Query: 401 gctcaaggccaaggaggc 418 ||||||||||| |||||| Sbjct: 88542 gctcaaggccagggaggc 88525 Score = 113 bits (57), Expect = 6e-22 Identities = 120/141 (85%) Strand = Plus / Minus Query: 7 ggctcgtcctcatccagatcctcctcacatccaaggggatctcgctcaaccccatcacct 66 ||||||| ||||||||||| || ||||| |||||||| || ||||| ||||||||||||| Sbjct: 88942 ggctcgtgctcatccagatactgctcacctccaagggcatgtcgctgaaccccatcacct 88883 Query: 67 cgctctactacgtcgcgccctgctgcctcggcttcctcttcctgccctgggtcttcgtcg 126 ||||||||||| ||||||| |||||||||| ||| | ||||| ||| |||||||| Sbjct: 88882 cgctctactacatcgcgccgtgctgcctcgtgttcttgacgctgccgtggtacttcgtcg 88823 Query: 127 agctgcccaggctgcgcgccg 147 ||||||| |||||||||||| Sbjct: 88822 agctgccgcggctgcgcgccg 88802
>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104307 Score = 250 bits (126), Expect = 4e-63 Identities = 225/258 (87%) Strand = Plus / Minus Query: 161 gcccgacttcttcgtcttcggcaccaactccctctgcgcgttcgcgctcaacctggccgt 220 ||||||| | ||||| ||||| || ||||| || ||||||||||||||||||||||| || Sbjct: 15220 gcccgacgtgttcgtgttcgggacgaactcgctgtgcgcgttcgcgctcaacctggcggt 15161 Query: 221 cttcttgctcgtgggcaagacgtccgcgctcaccatgaacgtggccggcgtcgtcaagga 280 ||| |||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 15160 gttcctgctggtggggaagacgtcggcgctgaccatgaacgtggccggcgtcgtcaagga 15101 Query: 281 ctggctgctcatcgccttctcctggtccgtgatccgggacacggtgaccccgatcaacct 340 ||||||||||||||||||||||||| | |||||| |||||| || || ||| ||||||| Sbjct: 15100 ctggctgctcatcgccttctcctggacagtgatcaaggacaccgtcacgccggtcaacct 15041 Query: 341 cttcggctacgggatcgccttcctgggcgtgggctactacaaccacgtcaagctgcaggc 400 | ||||||| || || |||||||| ||||| | |||||||||||| | ||||||||||| Sbjct: 15040 cgtcggctatggcattgccttcctcggcgtcgcctactacaaccatgccaagctgcaggg 14981 Query: 401 gctcaaggccaaggaggc 418 ||||||||||| |||||| Sbjct: 14980 gctcaaggccagggaggc 14963 Score = 113 bits (57), Expect = 6e-22 Identities = 120/141 (85%) Strand = Plus / Minus Query: 7 ggctcgtcctcatccagatcctcctcacatccaaggggatctcgctcaaccccatcacct 66 ||||||| ||||||||||| || ||||| |||||||| || ||||| ||||||||||||| Sbjct: 15380 ggctcgtgctcatccagatactgctcacctccaagggcatgtcgctgaaccccatcacct 15321 Query: 67 cgctctactacgtcgcgccctgctgcctcggcttcctcttcctgccctgggtcttcgtcg 126 ||||||||||| ||||||| |||||||||| ||| | ||||| ||| |||||||| Sbjct: 15320 cgctctactacatcgcgccgtgctgcctcgtgttcttgacgctgccgtggtacttcgtcg 15261 Query: 127 agctgcccaggctgcgcgccg 147 ||||||| |||||||||||| Sbjct: 15260 agctgccgcggctgcgcgccg 15240
>gb|AY109803.1| Zea mays CL59926_1 mRNA sequence Length = 592 Score = 115 bits (58), Expect = 1e-22 Identities = 164/201 (81%) Strand = Plus / Minus Query: 275 caaggactggctgctcatcgccttctcctggtccgtgatccgggacacggtgaccccgat 334 |||||| |||||| | || || ||||| ||||| |||||||||||||| || |||||||| Sbjct: 592 caaggattggctgttgattgcattctcgtggtctgtgatccgggacaccgtcaccccgat 533 Query: 335 caacctcttcggctacgggatcgccttcctgggcgtgggctactacaaccacgtcaagct 394 ||||| ||||| || |||||||| || |||| ||||||||| || |||||||| Sbjct: 532 taacctgttcggatatgggatcgcgnnnnnaggggtggcctactacaatcatgtcaagct 473 Query: 395 gcaggcgctcaaggccaaggaggcgcagaagaaggtggcgcaggcggacgaggaggccgg 454 ||||||||||||||| |||||||| |||||||| | || ||||| || ||||||| || Sbjct: 472 gcaggcgctcaaggctaaggaggcccagaagaaagccgcacaggctgatgaggaggttgg 413 Query: 455 ctcgctgctgcaggagcgcga 475 ||||| ||||||||||||| Sbjct: 412 gtcgctcttgcaggagcgcga 392
>gb|AY279313.1| Malus x domestica phosphate/phosphoenolpyruvate translocator protein-like mRNA, partial sequence Length = 518 Score = 107 bits (54), Expect = 3e-20 Identities = 189/234 (80%) Strand = Plus / Plus Query: 216 gccgtcttcttgctcgtgggcaagacgtccgcgctcaccatgaacgtggccggcgtcgtc 275 ||||| |||||||| || || ||||| || ||||| || ||||| || ||||| || || Sbjct: 87 gccgtgttcttgcttgtcggaaagacctcggcgctgacgatgaatgttgccggagtggtg 146 Query: 276 aaggactggctgctcatcgccttctcctggtccgtgatccgggacacggtgaccccgatc 335 || || ||||| || |||||||| || |||||||| ||| |||||| |||||||||||| Sbjct: 147 aaagattggctcctgatcgccttttcgtggtccgttatcaaggacaccgtgaccccgatc 206 Query: 336 aacctcttcggctacgggatcgccttcctgggcgtgggctactacaaccacgtcaagctg 395 || || ||||||||||| |||| || |||| || | ||||||||||||| || || Sbjct: 207 aatctgttcggctacggcctcgcgtttttgggggttgcctactacaaccactctaaattg 266 Query: 396 caggcgctcaaggccaaggaggcgcagaagaaggtggcgcaggcggacgaggag 449 ||||| || ||||||||||| ||||||||||||| |||||| | ||||||||| Sbjct: 267 caggctctgaaggccaaggatgcgcagaagaaggccgcgcagcccgacgaggag 320
>dbj|AK060262.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-A04, full insert sequence Length = 876 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 435 caggcggacgaggaggccggctcgctgctgcaggagcgcgactctcacggcgagcgca 492 ||||| |||||||||||||||||||||||||||||||| ||||| |||||||| |||| Sbjct: 574 caggccgacgaggaggccggctcgctgctgcaggagcgtgactcgcacggcgaacgca 631
>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12, complete sequence Length = 179644 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 15 ctcatccagatcctcctcacatccaaggggatctcgctcaaccccatcacctcgct 70 |||||||| || || ||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 83673 ctcatccatatactgctcacctccaagggcatgtcgctgaaccccatcacctcgct 83618
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 15 ctcatccagatcctcctcacatccaaggggatctcgctcaaccccatcacctcgct 70 |||||||| || || ||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 29946921 ctcatccatatactgctcacctccaagggcatgtcgctgaaccccatcacctcgct 29946866
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 54.0 bits (27), Expect = 4e-04 Identities = 76/91 (83%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 7 ggctcgtcctcatccagatcctcctcacatccaaggggatctcgctcaacccc-atcacc 65 ||||||| ||||||||||| || |||| ||||| || | ||||| |||||| |||||| Sbjct: 10616741 ggctcgtgctcatccagatactggtcacctccaatggcaagtcgctgaacccccatcacc 10616800 Query: 66 tcgctctactacgtcgcgccctgctgcctcg 96 ||||||||||| ||||||| ||||| |||| Sbjct: 10616801 tcgctctactatatcgcgccgtgctgtctcg 10616831
>gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G21, from chromosome 3, complete sequence Length = 187621 Score = 54.0 bits (27), Expect = 4e-04 Identities = 76/91 (83%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 7 ggctcgtcctcatccagatcctcctcacatccaaggggatctcgctcaacccc-atcacc 65 ||||||| ||||||||||| || |||| ||||| || | ||||| |||||| |||||| Sbjct: 33655 ggctcgtgctcatccagatactggtcacctccaatggcaagtcgctgaacccccatcacc 33714 Query: 66 tcgctctactacgtcgcgccctgctgcctcg 96 ||||||||||| ||||||| ||||| |||| Sbjct: 33715 tcgctctactatatcgcgccgtgctgtctcg 33745
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 54.0 bits (27), Expect = 4e-04 Identities = 75/90 (83%), Gaps = 2/90 (2%) Strand = Plus / Minus Query: 7 ggctcgtcctcatccagatcctcctcacatccaaggggatctcgctcaaccccatcacct 66 ||||||| ||||||||||| || |||| |||||||| || || | ||||||||||||| Sbjct: 26659577 ggctcgtgctcatccagatactgatcacctccaagggcatgtcagtgaaccccatcacct 26659518 Query: 67 cgctctactacgtcgcgccctgctgcctcg 96 |||||| || ||||||| |||||||||| Sbjct: 26659517 cgctct--cacatcgcgccgtgctgcctcg 26659490
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 54.0 bits (27), Expect = 4e-04 Identities = 76/91 (83%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 7 ggctcgtcctcatccagatcctcctcacatccaaggggatctcgctcaacccc-atcacc 65 ||||||| ||||||||||| || |||| ||||| || | ||||| |||||| |||||| Sbjct: 10614842 ggctcgtgctcatccagatactggtcacctccaatggcaagtcgctgaacccccatcacc 10614901 Query: 66 tcgctctactacgtcgcgccctgctgcctcg 96 ||||||||||| ||||||| ||||| |||| Sbjct: 10614902 tcgctctactatatcgcgccgtgctgtctcg 10614932
>dbj|AP005760.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1047G05 Length = 145431 Score = 54.0 bits (27), Expect = 4e-04 Identities = 75/90 (83%), Gaps = 2/90 (2%) Strand = Plus / Minus Query: 7 ggctcgtcctcatccagatcctcctcacatccaaggggatctcgctcaaccccatcacct 66 ||||||| ||||||||||| || |||| |||||||| || || | ||||||||||||| Sbjct: 17040 ggctcgtgctcatccagatactgatcacctccaagggcatgtcagtgaaccccatcacct 16981 Query: 67 cgctctactacgtcgcgccctgctgcctcg 96 |||||| || ||||||| |||||||||| Sbjct: 16980 cgctct--cacatcgcgccgtgctgcctcg 16953
>dbj|AP004803.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0677B10 Length = 134423 Score = 54.0 bits (27), Expect = 4e-04 Identities = 75/90 (83%), Gaps = 2/90 (2%) Strand = Plus / Minus Query: 7 ggctcgtcctcatccagatcctcctcacatccaaggggatctcgctcaaccccatcacct 66 ||||||| ||||||||||| || |||| |||||||| || || | ||||||||||||| Sbjct: 76007 ggctcgtgctcatccagatactgatcacctccaagggcatgtcagtgaaccccatcacct 75948 Query: 67 cgctctactacgtcgcgccctgctgcctcg 96 |||||| || ||||||| |||||||||| Sbjct: 75947 cgctct--cacatcgcgccgtgctgcctcg 75920
>dbj|AK110242.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-G05, full insert sequence Length = 2733 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 405 aaggccaaggaggcgcagaagaaggtggc 433 |||||||||||||||||||| |||||||| Sbjct: 424 aaggccaaggaggcgcagaacaaggtggc 452
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 402 ctcaaggccaaggaggcgcaga 423 |||||||||||||||||||||| Sbjct: 476511 ctcaaggccaaggaggcgcaga 476490
>ref|XM_476901.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2248 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ctgctgcctcggcttcctctt 106 ||||||||||||||||||||| Sbjct: 1719 ctgctgcctcggcttcctctt 1699
>gb|BC018142.1| Homo sapiens caspase recruitment domain family, member 14, mRNA (cDNA clone MGC:9539 IMAGE:3847282), complete cds Length = 2621 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 89 ctgcctcggcttcctcttcctgccc 113 |||||||||||||||| |||||||| Sbjct: 2459 ctgcctcggcttcctcctcctgccc 2483
>gb|AY358172.1| Homo sapiens clone DNA203528 GPR113 (UNQ9196) mRNA, complete cds Length = 3493 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 ccctgctgcctcggcttcctcttcc 108 |||||||||||| |||||||||||| Sbjct: 847 ccctgctgcctcagcttcctcttcc 871
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 388 tcaagctgcaggcgctcaaggccaaggaggcgc 420 |||||| |||| |||||||||||||||| |||| Sbjct: 348171 tcaagcagcagacgctcaaggccaaggaagcgc 348203
>ref|XM_967210.1| PREDICTED: Tribolium castaneum similar to CG5965-PA (LOC661020), mRNA Length = 4077 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 gtcaaggactggctgctcatc 293 ||||||||||||||||||||| Sbjct: 621 gtcaaggactggctgctcatc 601
>gb|BC043211.1| Homo sapiens cDNA clone IMAGE:5295143, containing frame-shift errors Length = 4032 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 ccctgctgcctcggcttcctcttcc 108 |||||||||||| |||||||||||| Sbjct: 247 ccctgctgcctcagcttcctcttcc 271
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ctgctgcctcggcttcctctt 106 ||||||||||||||||||||| Sbjct: 4527424 ctgctgcctcggcttcctctt 4527404
>gb|AC010896.15| Homo sapiens BAC clone RP11-499P9 from 2, complete sequence Length = 188780 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 ccctgctgcctcggcttcctcttcc 108 |||||||||||| |||||||||||| Sbjct: 87312 ccctgctgcctcagcttcctcttcc 87288
>gb|AC123764.18| Homo sapiens chromosome 17, clone CTC-784N20, complete sequence Length = 144000 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 89 ctgcctcggcttcctcttcctgccc 113 |||||||||||||||| |||||||| Sbjct: 33872 ctgcctcggcttcctcctcctgccc 33896
>gb|AC127515.9| Homo sapiens chromosome 17, clone RP13-63C9, complete sequence Length = 88190 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 89 ctgcctcggcttcctcttcctgccc 113 |||||||||||||||| |||||||| Sbjct: 81948 ctgcctcggcttcctcctcctgccc 81924
>gb|AC087741.18| Homo sapiens chromosome 17, clone RP11-334C17, complete sequence Length = 182016 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 89 ctgcctcggcttcctcttcctgccc 113 |||||||||||||||| |||||||| Sbjct: 7690 ctgcctcggcttcctcctcctgccc 7666
>dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1046_F10 Length = 118472 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ctgctgcctcggcttcctctt 106 ||||||||||||||||||||| Sbjct: 106143 ctgctgcctcggcttcctctt 106123
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 gcgccgtcggcatgttcgagc 162 ||||||||||||||||||||| Sbjct: 6463968 gcgccgtcggcatgttcgagc 6463948
>dbj|AK102066.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082F01, full insert sequence Length = 2248 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ctgctgcctcggcttcctctt 106 ||||||||||||||||||||| Sbjct: 1719 ctgctgcctcggcttcctctt 1699
>dbj|AK099980.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129E14, full insert sequence Length = 4559 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ctgctgcctcggcttcctctt 106 ||||||||||||||||||||| Sbjct: 1411 ctgctgcctcggcttcctctt 1391
>emb|BX649345.16| Zebrafish DNA sequence from clone DKEY-161F11 in linkage group 11, complete sequence Length = 138432 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 26 cctcctcacatccaaggggatctcg 50 ||||| ||||||||||||||||||| Sbjct: 109872 cctccgcacatccaaggggatctcg 109896
>ref|NM_153835.1| Homo sapiens G protein-coupled receptor 113 (GPR113), mRNA Length = 3240 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 ccctgctgcctcggcttcctcttcc 108 |||||||||||| |||||||||||| Sbjct: 441 ccctgctgcctcagcttcctcttcc 465
>gb|AY140955.1| Homo sapiens G-protein coupled receptor GPR113 (GPR113) mRNA, complete cds Length = 3240 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 ccctgctgcctcggcttcctcttcc 108 |||||||||||| |||||||||||| Sbjct: 441 ccctgctgcctcagcttcctcttcc 465
>dbj|AB065959.1| Homo sapiens gene for seven transmembrane helix receptor, complete cds, isolate:CBRC7TM_522 Length = 7873 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 ccctgctgcctcggcttcctcttcc 108 |||||||||||| |||||||||||| Sbjct: 484 ccctgctgcctcagcttcctcttcc 508
>emb|AL833696.1|HSM805009 Homo sapiens mRNA; cDNA DKFZp667D139 (from clone DKFZp667D139) Length = 4412 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 89 ctgcctcggcttcctcttcctgccc 113 |||||||||||||||| |||||||| Sbjct: 2587 ctgcctcggcttcctcctcctgccc 2563
>gb|AC105976.13| Mus musculus chromosome 5, clone RP24-315H14, complete sequence Length = 188130 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 427 aggtggcgcaggcggacgaggagg 450 |||||||| ||||||||||||||| Sbjct: 169562 aggtggcggaggcggacgaggagg 169585
>ref|NM_031737.1| Rattus norvegicus NK6 transcription factor related, locus 1 (Drosophila) (Nkx6-1), mRNA Length = 3211 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 aggtggcgcaggcggacgaggagg 450 |||||||| ||||||||||||||| Sbjct: 1191 aggtggcggaggcggacgaggagg 1168
>ref|XM_417477.1| PREDICTED: Gallus gallus similar to cadherin 22 precursor; ortholog of rat PB-cadherin (LOC419305), mRNA Length = 5340 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 gaaggtggcgcaggcggacgagga 448 |||||||| ||||||||||||||| Sbjct: 5112 gaaggtggagcaggcggacgagga 5135
>gb|AC150555.1| Drosophila melanogaster clone BACR26G12, complete sequence Length = 164461 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 gcaggcggacgaggaggccg 453 |||||||||||||||||||| Sbjct: 93594 gcaggcggacgaggaggccg 93575
>ref|NM_144955.1| Mus musculus NK6 transcription factor related, locus 1 (Drosophila) (Nkx6-1), mRNA Length = 1815 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 aggtggcgcaggcggacgaggagg 450 |||||||| ||||||||||||||| Sbjct: 880 aggtggcggaggcggacgaggagg 857
>gb|AC140841.2| Mus musculus BAC clone RP24-470M20 from chromosome 9, complete sequence Length = 163348 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cctgctgcctcggcttcctc 104 |||||||||||||||||||| Sbjct: 76779 cctgctgcctcggcttcctc 76798
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 ggccgtcttcttgctcgtgg 234 |||||||||||||||||||| Sbjct: 114785 ggccgtcttcttgctcgtgg 114804
>gb|AC121983.3| Mus musculus BAC clone RP24-292F8 from chromosome 5, complete sequence Length = 161350 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 427 aggtggcgcaggcggacgaggagg 450 |||||||| ||||||||||||||| Sbjct: 36161 aggtggcggaggcggacgaggagg 36184
>gb|AC139601.8| Medicago truncatula clone mth2-8h11, complete sequence Length = 126204 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ccgacttcttcgtcttcggc 182 |||||||||||||||||||| Sbjct: 12531 ccgacttcttcgtcttcggc 12512
>gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete sequence Length = 452156 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 gcaggcgctcaaggccaagg 414 |||||||||||||||||||| Sbjct: 140744 gcaggcgctcaaggccaagg 140763
>emb|AL445674.12| Human DNA sequence from clone RP11-477L5 on chromosome 9, complete sequence Length = 91940 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 caaggccaaggaggcgcaga 423 |||||||||||||||||||| Sbjct: 63862 caaggccaaggaggcgcaga 63881
>emb|Z23068.1|BHV12US Bovine herpesvirus type 1 subtype 2 short unique region DNA Length = 10066 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 ggccgtcttcttgctcgtgg 234 |||||||||||||||||||| Sbjct: 731 ggccgtcttcttgctcgtgg 750
>ref|NM_164855.1| Drosophila melanogaster numb CG3779-RB, transcript variant B (numb), mRNA Length = 3082 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gcaggcggacgaggaggccg 453 |||||||||||||||||||| Sbjct: 603 gcaggcggacgaggaggccg 622
>ref|NM_078799.2| Drosophila melanogaster numb CG3779-RA, transcript variant A (numb), mRNA Length = 3479 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gcaggcggacgaggaggccg 453 |||||||||||||||||||| Sbjct: 1000 gcaggcggacgaggaggccg 1019
>gb|AY051728.1| Drosophila melanogaster LD25907 full length cDNA Length = 2354 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gcaggcggacgaggaggccg 453 |||||||||||||||||||| Sbjct: 23 gcaggcggacgaggaggccg 42
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gcccaggctgcgcgccgtcg 150 |||||||||||||||||||| Sbjct: 1286481 gcccaggctgcgcgccgtcg 1286462
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 caccaggctcgtcctcatcc 21 |||||||||||||||||||| Sbjct: 381563 caccaggctcgtcctcatcc 381582
>gb|AC159643.2| Mus musculus BAC clone RP23-384H10 from chromosome 12, complete sequence Length = 200939 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 89 ctgcctcggcttcctcttcctgccctgggtct 120 ||||||| || || |||||||||||||||||| Sbjct: 88184 ctgcctctgcctcttcttcctgccctgggtct 88215
>gb|AF357883.1|AF357883 Mus musculus homeodomain transcription factor (Nkx6-1) mRNA, complete cds Length = 1815 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 aggtggcgcaggcggacgaggagg 450 |||||||| ||||||||||||||| Sbjct: 880 aggtggcggaggcggacgaggagg 857
>gb|AC007299.18|AC007299 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR07D23, complete sequence Length = 176610 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gcaggcggacgaggaggccg 453 |||||||||||||||||||| Sbjct: 83023 gcaggcggacgaggaggccg 83042
>gb|AF291666.1|AF291666 Mus musculus homeodomain-containing transcription factor Nkx6.1 gene, partial cds Length = 4738 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 aggtggcgcaggcggacgaggagg 450 |||||||| ||||||||||||||| Sbjct: 4359 aggtggcggaggcggacgaggagg 4336
>gb|AE004953.1| Pseudomonas aeruginosa PAO1, section 514 of 529 of the complete genome Length = 10959 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 agctgcaggcgctcaaggcc 410 |||||||||||||||||||| Sbjct: 7704 agctgcaggcgctcaaggcc 7685
>ref|XM_579527.1| PREDICTED: Rattus norvegicus NK6 transcription factor related, locus 1 (Drosophila) (Nkx6-1), mRNA Length = 3221 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 aggtggcgcaggcggacgaggagg 450 |||||||| ||||||||||||||| Sbjct: 1200 aggtggcggaggcggacgaggagg 1177
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 ggtggcgcaggcggacgagg 447 |||||||||||||||||||| Sbjct: 151535 ggtggcgcaggcggacgagg 151554
>gb|AY151193.1| Leishmania guyanensis beta-tubulin intergenic spacer region, partial sequence Length = 505 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 actccctctgcgcgttcgcg 206 |||||||||||||||||||| Sbjct: 443 actccctctgcgcgttcgcg 424
>emb|Z98199.1|BHVUS12 Bovine herpesvirus 1 genomic US region Length = 8599 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 ggccgtcttcttgctcgtgg 234 |||||||||||||||||||| Sbjct: 551 ggccgtcttcttgctcgtgg 570
>ref|NM_211560.1| Eremothecium gossypii AGL169Cp (AGL169C), mRNA Length = 759 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 caccaggctcgtcctcatcc 21 |||||||||||||||||||| Sbjct: 523 caccaggctcgtcctcatcc 504
>gb|AF004431.1|AF004431 Rattus norvegicus homeodomain protein Nkx6.1 (nkx6.1) mRNA, complete cds Length = 3211 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 aggtggcgcaggcggacgaggagg 450 |||||||| ||||||||||||||| Sbjct: 1191 aggtggcggaggcggacgaggagg 1168
>gb|AE003625.3| Drosophila melanogaster chromosome 2L, section 34 of 83 of the complete sequence Length = 271507 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gcaggcggacgaggaggccg 453 |||||||||||||||||||| Sbjct: 23218 gcaggcggacgaggaggccg 23237
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 tgcaggcgctcaaggccaag 413 |||||||||||||||||||| Sbjct: 2012108 tgcaggcgctcaaggccaag 2012089
>gb|AC004637.1|AC004637 Homo sapiens chromosome 19, cosmid F16815, complete sequence Length = 41459 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 gctcaaggccaaggaggcgc 420 |||||||||||||||||||| Sbjct: 1853 gctcaaggccaaggaggcgc 1872
>emb|CT030154.8| Mouse DNA sequence from clone RP23-387H3 on chromosome 12, complete sequence Length = 213294 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 89 ctgcctcggcttcctcttcctgccctgggtct 120 ||||||| || || |||||||||||||||||| Sbjct: 206914 ctgcctctgcctcttcttcctgccctgggtct 206883
>gb|L36951.1|TFEMADE Thiobacillus versutus membrane protein (madE) and (madD) mRNA, complete cds Length = 1171 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 ggatcgccttcctgggcgtg 371 |||||||||||||||||||| Sbjct: 597 ggatcgccttcctgggcgtg 616
>gb|M27815.1|DRONUMB D.melanogaster numb mRNA, complete cds Length = 3476 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 gcaggcggacgaggaggccg 453 |||||||||||||||||||| Sbjct: 998 gcaggcggacgaggaggccg 1017 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,859,757 Number of Sequences: 3902068 Number of extensions: 3859757 Number of successful extensions: 87870 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 87 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86678 Number of HSP's gapped (non-prelim): 1179 length of query: 492 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 470 effective length of database: 17,147,199,772 effective search space: 8059183892840 effective search space used: 8059183892840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
