>GML_HUMAN (Q99445) Glycosyl-phosphatidylinositol-anchored molecule-like|
           protein precursor
          Length = 158

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = -3

Query: 494 YYNCTKNCTLQHNASHYKYHEGRIPFT*MSLRWSCTSSDSVC 369
           Y NCT NCT  + A       G+I F   S  W C  +  VC
Sbjct: 70  YKNCTNNCTFVYAAEQPPEAPGKI-FKTNSFYWVCCCNSMVC 110

>SYNE2_HUMAN (Q8WXH0) Nesprin-2 (Nuclear envelope spectrin repeat protein 2)|
            (Syne-2) (Synaptic nuclear envelope protein 2) (Nucleus
            and actin connecting element protein) (NUANCE protein)
          Length = 6885

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
 Frame = +1

Query: 199  STLDLFTRELEFRREMVAAFKSLVKERWESIHAAPVIVLPYEGD-DNSNKALPAKASRQT 375
            +++DL T  L    E +  +K  V    ESI +   I++PY  D  N  ++L     +Q 
Sbjct: 3242 TSIDLRTNVLNDAYENLTRYKEAVTRAVESITSLEAIIIPYRVDVGNPEESLEMPLRKQE 3301

Query: 376  ESEDVQDQRSDI 411
            E E       D+
Sbjct: 3302 ELESTVAHIQDL 3313

>CST11_RAT (Q8K5A3) Cystatin-11 precursor|
          Length = 139

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = -1

Query: 499 HLTTTVQKTVHYNTTPHTTNIMKGGFHSHRCHYVGLARLPILSAWKLLR 353
           H+T  +Q+T    T  +  N+ +G  H     Y  +  +P L  +K+L+
Sbjct: 84  HITVEMQRTTCLKTEKNLCNVQEGELHKQIQCYFSVYVIPWLEVFKMLK 132

>FENR_CHLRE (P53991) Ferredoxin--NADP reductase, chloroplast precursor (EC|
           1.18.1.2) (FNR)
          Length = 354

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -1

Query: 337 CYRRPRMAARSQGQRVSTPIAXXXXXXXXXXFLSGILAPS*IDQG 203
           C RR R+A R  G+R+  P+A           +S    P+ +++G
Sbjct: 15  CSRRLRVATRVAGRRMCRPVAATKASTAVTTDMSKRTVPTKLEEG 59


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,572,094
Number of Sequences: 219361
Number of extensions: 1214541
Number of successful extensions: 3311
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3311
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3638905326
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)