ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags19i18 |
|---|---|
| Clone Library Name | barley_pub |
>RIB1_MOUSE (Q91YQ5) Dolichyl-diphosphooligosaccharide--protein| glycosyltransferase 67 kDa subunit precursor (EC 2.4.1.119) (Ribophorin I) (RPN-I) Length = 608 Score = 138 bits (348), Expect = 6e-33 Identities = 68/156 (43%), Positives = 98/156 (62%), Gaps = 5/156 (3%) Frame = +2 Query: 14 NNNPFAVAKELIREIEISHWGNVQITEHYNIVHGGARLKGEFSRLDYQSRPYARGVSSFR 193 NN+PF + R IE+SHWGN+ + E+ ++ H GA LKG FSR DYQ +P + G+SS R Sbjct: 221 NNSPFLTITSMTRVIEVSHWGNIAVEENVDLKHTGAVLKGPFSRYDYQRQPDS-GISSIR 279 Query: 194 HLIARLPPRAHSIYYRDEIGNISTSHLWSDSKKTQLEIEPRFPLFGGWQTTFTIGYGLPL 373 LP A +YYRDEIGN+STSHL ++EI PRFPLFGGW+T + +GY LP Sbjct: 280 SFKTILPAAAQDVYYRDEIGNVSTSHLLILDDSVEMEIRPRFPLFGGWKTHYIVGYNLPS 339 Query: 374 EDFVFSSDGR-----RFLNITFGSPMEEILIEKLIV 466 +++++ + RF++ F + + L K+I+ Sbjct: 340 YEYLYNLGDQYALKMRFVDHVFDEQVIDSLTVKIIL 375
>RIB1_HUMAN (P04843) Dolichyl-diphosphooligosaccharide--protein| glycosyltransferase 67 kDa subunit precursor (EC 2.4.1.119) (Ribophorin I) (RPN-I) Length = 607 Score = 138 bits (348), Expect = 6e-33 Identities = 68/156 (43%), Positives = 98/156 (62%), Gaps = 5/156 (3%) Frame = +2 Query: 14 NNNPFAVAKELIREIEISHWGNVQITEHYNIVHGGARLKGEFSRLDYQSRPYARGVSSFR 193 NN+PF + R IE+SHWGN+ + E+ ++ H GA LKG FSR DYQ +P + G+SS R Sbjct: 220 NNSPFLTITSMTRVIEVSHWGNIAVEENVDLKHTGAVLKGPFSRYDYQRQPDS-GISSIR 278 Query: 194 HLIARLPPRAHSIYYRDEIGNISTSHLWSDSKKTQLEIEPRFPLFGGWQTTFTIGYGLPL 373 LP A +YYRDEIGN+STSHL ++EI PRFPLFGGW+T + +GY LP Sbjct: 279 SFKTILPAAAQDVYYRDEIGNVSTSHLLILDDSVEMEIRPRFPLFGGWKTHYIVGYNLPS 338 Query: 374 EDFVFSSDGR-----RFLNITFGSPMEEILIEKLIV 466 +++++ + RF++ F + + L K+I+ Sbjct: 339 YEYLYNLGDQYALKMRFVDHVFDEQVIDSLTVKIIL 374
>RIB1_RAT (P07153) Dolichyl-diphosphooligosaccharide--protein| glycosyltransferase 67 kDa subunit precursor (EC 2.4.1.119) (Ribophorin I) (RPN-I) Length = 605 Score = 135 bits (339), Expect = 7e-32 Identities = 67/156 (42%), Positives = 97/156 (62%), Gaps = 5/156 (3%) Frame = +2 Query: 14 NNNPFAVAKELIREIEISHWGNVQITEHYNIVHGGARLKGEFSRLDYQSRPYARGVSSFR 193 NN+PF + R IE+SHWGN+ + E+ ++ H GA LKG FSR DYQ +P + G+SS R Sbjct: 218 NNSPFLTITSMTRVIEVSHWGNIAVEENVDLKHTGAVLKGPFSRYDYQRQPDS-GISSIR 276 Query: 194 HLIARLPPRAHSIYYRDEIGNISTSHLWSDSKKTQLEIEPRFPLFGGWQTTFTIGYGLPL 373 LP A +YYRDEIGN+STSHL ++EI PRF LFGGW+T + +GY LP Sbjct: 277 SFKTILPAAAQDVYYRDEIGNVSTSHLLILDDSVEMEIRPRFGLFGGWKTHYIVGYNLPS 336 Query: 374 EDFVFSSDGR-----RFLNITFGSPMEEILIEKLIV 466 +++++ + RF++ F + + L K+I+ Sbjct: 337 YEYLYNLGDQYALKMRFVDHVFDEQVIDSLTVKIIL 372
>OSTA_SCHPO (Q10176) Putative dolichyl-diphosphooligosaccharide--protein| glycosyltransferase alpha subunit precursor (EC 2.4.1.119) (Oligosaccharyl transferase alpha subunit) Length = 450 Score = 82.8 bits (203), Expect = 4e-16 Identities = 39/129 (30%), Positives = 72/129 (55%), Gaps = 1/129 (0%) Frame = +2 Query: 80 VQITEHYNIVHGGARLKGEFSRLDYQSRPYARGVSS-FRHLIARLPPRAHSIYYRDEIGN 256 ++++E + A+LK F R + + VS+ ++ LP + +YY DE+GN Sbjct: 231 LEVSERVVFENHAAKLKSNFDRAKWYMGNFYNPVSTAINRVVYSLPRNSKDVYYTDEVGN 290 Query: 257 ISTSHLWSDSKKTQLEIEPRFPLFGGWQTTFTIGYGLPLEDFVFSSDGRRFLNITFGSPM 436 I+TSH+ + +T +E+ PR+P+FGGW F + + +P E+F S + R +L+I Sbjct: 291 ITTSHMRVEPHQTWIELNPRYPVFGGWNYLFQLDWKMPYEEFRSSKNRREYLDIPLAWSP 350 Query: 437 EEILIEKLI 463 +++ EK + Sbjct: 351 GDMIYEKAV 359
>OSTA_YEAST (P41543) Dolichyl-diphosphooligosaccharide--protein| glycosyltransferase alpha subunit precursor (EC 2.4.1.119) (Oligosaccharyl transferase alpha subunit) (Oligosaccharyl transferase 64 kDa subunit) Length = 476 Score = 77.0 bits (188), Expect = 2e-14 Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 4/133 (3%) Frame = +2 Query: 14 NNNPFAVAKELIREIEISHWGN-VQITEHYNIVHGGARLKGEFSRLDYQSRPYARGVSSF 190 +N P L R+I +SHW + +Q E+Y + + A+L FSRL+ + + + Sbjct: 226 HNAPLNQVVNLRRDIWLSHWASTIQFEEYYELTNKAAKLSKGFSRLELMKQIQTQNMRQT 285 Query: 191 RHLIAR---LPPRAHSIYYRDEIGNISTSHLWSDSKKTQLEIEPRFPLFGGWQTTFTIGY 361 + LP A Y+ D +G +STSH +++ I PRFP+FGGW FT+G+ Sbjct: 286 HFVTVLDMLLPEGATDHYFTDLVGLVSTSH----AERDHFFIRPRFPIFGGWNYNFTVGW 341 Query: 362 GLPLEDFVFSSDG 400 L DF+ S G Sbjct: 342 TNKLSDFLHVSSG 354
>OST1_CHICK (P80896) Dolichyl-diphosphooligosaccharide--protein| glycosyltransferase 65-I kDa subunit (EC 2.4.1.119) (Oligosaccharyl transferase 65-I kDa subunit) (Fragments) Length = 28 Score = 31.6 bits (70), Expect = 1.0 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +2 Query: 302 EIEPRFPLFGGWQTTFTI 355 EI PRFPL GGW+T + + Sbjct: 11 EIRPRFPLVGGWKTHYXV 28
>MURD_VIBVY (Q7MNV3) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 442 Score = 30.0 bits (66), Expect = 3.1 Identities = 25/70 (35%), Positives = 34/70 (48%) Frame = +3 Query: 150 TTSLDLTQEGFHHLGISLLDCLQGPTLFITEMKLVIFQHHTYGVILRRPNWKLNRGFPCL 329 TTSL L F +L +D QG + + KL IFQH +GV+ R + +P Sbjct: 170 TTSLHLVAAAFLNLSEDHMDRYQGMDDY-RQAKLRIFQHAKHGVVNRDD----RQTYPET 224 Query: 330 VVGKQPLPLV 359 G+Q L LV Sbjct: 225 SHGQQSLALV 234
>VE2_HPV53 (P36797) Regulatory protein E2| Length = 384 Score = 29.3 bits (64), Expect = 5.2 Identities = 14/51 (27%), Positives = 25/51 (49%) Frame = +1 Query: 310 TEVSLVWWLANNLYHWLWFTS*RLCFQF*WKEISQYNIWFSDGGDSHRKAY 462 TE ++ W ++ +W+T + CF+ K+ +WF DG +R Y Sbjct: 85 TEYNMEEWTLRDVCESMWYTEPKQCFK---KQGQHIEVWF-DGSKDNRAEY 131
>NQRB_YERPE (Q8ZBZ1) Na(+)-translocating NADH-quinone reductase subunit B (EC| 1.6.5.-) (Na(+)-translocating NQR subunit B) (Na(+)-NQR subunit B) (NQR complex subunit B) (NQR-1 subunit B) Length = 413 Score = 29.3 bits (64), Expect = 5.2 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 2/65 (3%) Frame = +2 Query: 227 SIYYRDEI--GNISTSHLWSDSKKTQLEIEPRFPLFGGWQTTFTIGYGLPLEDFVFSSDG 400 SI + EI G TS L+S L + P PL WQ I +G+ + +F G Sbjct: 148 SIVRKHEINEGFFVTSILFS------LIVPPTLPL---WQAALGISFGVVIGKEIFGGTG 198 Query: 401 RRFLN 415 R FLN Sbjct: 199 RNFLN 203
>NQRB_PSEAE (Q9HZK7) Na(+)-translocating NADH-quinone reductase subunit B (EC| 1.6.5.-) (Na(+)-translocating NQR subunit B) (Na(+)-NQR subunit B) (NQR complex subunit B) (NQR-1 subunit B) Length = 403 Score = 28.9 bits (63), Expect = 6.8 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = +2 Query: 299 LEIEPRFPLFGGWQTTFTIGYGLPLEDFVFSSDGRRFLN 415 L + P PL WQ I +G+ L VF G+ FLN Sbjct: 162 LTLPPSVPL---WQVALGISFGVVLGKEVFGGTGKNFLN 197
>YELL_DROPS (Q9BI18) Protein yellow precursor| Length = 560 Score = 28.9 bits (63), Expect = 6.8 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 15/122 (12%) Frame = +2 Query: 8 LXNNNPFAVAKELIRE---IEISHWGNVQITEHYNIVHGGARLKGE-----FSRLD---- 151 L ++ FAV+ ++R+ IE S+ V + E H +R+ + F+ +D Sbjct: 279 LASHRQFAVSTRILRDETRIEDSYHDFVALDERGPNAHTTSRVMSDDGVELFNLIDQNAV 338 Query: 152 ---YQSRPYARGVSSFRHLIARLPPRAHSIYYRDEIGNISTSHLWSDSKKTQLEIEPRFP 322 + S PY+ P+ H I RD++G + + + D K + R P Sbjct: 339 GCWHSSMPYS--------------PQFHGIVDRDDVGLVFPADVKIDENKNVWVLSDRMP 384 Query: 323 LF 328 +F Sbjct: 385 VF 386
>PRTT_SERMA (P29805) Extracellular serine protease precursor (EC 3.4.21.-)| Length = 1045 Score = 28.9 bits (63), Expect = 6.8 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 4/35 (11%) Frame = +3 Query: 150 TTSLDLTQEGFHHL----GISLLDCLQGPTLFITE 242 TT+ DL + G HL ++L D + GP +FIT+ Sbjct: 371 TTATDLGEVGIDHLFGWGRVNLRDAINGPKMFITQ 405
>YELL_DROSU (O02437) Protein yellow precursor| Length = 568 Score = 28.5 bits (62), Expect = 8.9 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 15/122 (12%) Frame = +2 Query: 8 LXNNNPFAVAKELIRE---IEISHWGNVQITEHYNIVHGGARLKGE-----FSRLD---- 151 L ++ FAV+ ++R+ E S+ V + E H +R+ + F+ +D Sbjct: 277 LASHRQFAVSTRILRDETRTEDSYHDFVALDERGPNAHTTSRVMSDDGVELFNLIDQNAV 336 Query: 152 ---YQSRPYARGVSSFRHLIARLPPRAHSIYYRDEIGNISTSHLWSDSKKTQLEIEPRFP 322 + S PY+ P++H I RD++G + + + D K + R P Sbjct: 337 GCWHSSMPYS--------------PQSHGIVDRDDVGLVFPADIKIDENKNVWVLSDRMP 382 Query: 323 LF 328 +F Sbjct: 383 VF 384
>MURD_VIBVU (Q8DEK8) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC| 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid-adding enzyme) Length = 442 Score = 28.5 bits (62), Expect = 8.9 Identities = 24/70 (34%), Positives = 34/70 (48%) Frame = +3 Query: 150 TTSLDLTQEGFHHLGISLLDCLQGPTLFITEMKLVIFQHHTYGVILRRPNWKLNRGFPCL 329 T+SL L F +L +D QG + + KL IFQH +GV+ R + +P Sbjct: 170 TSSLHLVAAAFLNLSEDHMDRYQGMDDY-RQAKLRIFQHAKHGVVNRDD----RQTYPET 224 Query: 330 VVGKQPLPLV 359 G+Q L LV Sbjct: 225 SHGQQSLALV 234
>NQRB_VIBCH (Q9KPS2) Na(+)-translocating NADH-quinone reductase subunit B (EC| 1.6.5.-) (Na(+)-translocating NQR subunit B) (Na(+)-NQR subunit B) (NQR complex subunit B) (NQR-1 subunit B) Length = 415 Score = 28.5 bits (62), Expect = 8.9 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = +2 Query: 299 LEIEPRFPLFGGWQTTFTIGYGLPLEDFVFSSDGRRFLN 415 L + P PL WQ I +G+ + VF GR FLN Sbjct: 168 LIVPPTLPL---WQAALGITFGVVVAKEVFGGTGRNFLN 203
>GPAA1_MOUSE (Q9WTK3) Glycosylphosphatidylinositol anchor attachment 1 protein| (GPI anchor attachment protein 1) (GAA1 protein homolog) (mGAA1) Length = 620 Score = 28.5 bits (62), Expect = 8.9 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = +3 Query: 204 LDCLQGPTLFITEMKLVIFQHHTYGVILRRPNWKLNRGFPCLVVGKQP 347 L +G LF+T + + +H+TYG +L FP L +G P Sbjct: 571 LSLAEGWQLFLTALAQGVLEHYTYGALL----------FPILALGLYP 608 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,976,926 Number of Sequences: 219361 Number of extensions: 1513348 Number of successful extensions: 3352 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 3288 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3347 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
