ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags19h17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY107857.1| Zea mays PCO113823 mRNA sequence 260 4e-66
2gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome... 107 3e-20
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 107 3e-20
5dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 105 1e-19
7emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003... 105 1e-19
8ref|NM_121980.2| Arabidopsis thaliana unknown protein AT5G19750 ... 50 0.007
9gb|BT001037.1| Arabidopsis thaliana At5g19750/T29J13_170 mRNA, c... 50 0.007
10gb|AY058149.1| Arabidopsis thaliana AT5g19750/T29J13_170 mRNA, c... 50 0.007
11gb|AY088454.1| Arabidopsis thaliana clone 6789 mRNA, complete se... 50 0.007
12gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome 44 0.42
13emb|CT025599.16| Mouse DNA sequence from clone RP24-254G12 on ch... 44 0.42
14gb|AC154678.2| Mus musculus BAC clone RP24-302G10 from chromosom... 42 1.7
15ref|XM_414355.1| PREDICTED: Gallus gallus similar to anion excha... 40 6.6
16gb|AC134847.3| Mus musculus BAC clone RP24-171M1 from chromosome... 40 6.6
17gb|AC149486.1| Populus trichocarpa clone Pop1-8L22, complete seq... 40 6.6
18gb|AC149543.1| Populus trichocarpa clone Pop1-47M20, complete se... 40 6.6
19gb|AC122905.3| Mus musculus BAC clone RP23-47A1 from 10, complet... 40 6.6
20gb|AE014075.1| Escherichia coli CFT073, complete genome 40 6.6
21emb|AJ719425.1| Gallus gallus mRNA for hypothetical protein, clo... 40 6.6
22ref|NM_001006350.1| Gallus gallus Der1-like domain family, membe... 40 6.6
23emb|BX248581.17| Zebrafish DNA sequence from clone CH211-208O6 i... 40 6.6
24gb|AC078906.6| Homo sapiens, clone RP11-142A23, complete sequence 40 6.6
25tpg|BK001240.1| TPA: TPA_exp: Homo sapiens growth arrest-specifi... 40 6.6
26emb|BX930511.2| Gallus gallus finished cDNA, clone ChEST619h11 40 6.6
27emb|AL929225.6| Zebrafish DNA sequence from clone CH211-250A24, ... 40 6.6
28gb|AC124235.11| Mus musculus chromosome 13, clone RP23-273G24, c... 40 6.6
29emb|BX072579.14| Human DNA sequence from clone RP11-199F6 on chr... 40 6.6 
>gb|AY107857.1| Zea mays PCO113823 mRNA sequence
          Length = 677

 Score =  260 bits (131), Expect = 4e-66
 Identities = 221/251 (88%)
 Strand = Plus / Plus

                                                                       
Query: 204 gtggggccaacgttgcatttctggtacttgtatttgagtaaattagtgacaatcagcggg 263
           ||||||||||| || ||| ||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 18  gtggggccaactttacatgtctggtacttgtatttgagcaaattagtgacaatcagtggg 77

                                                                       
Query: 264 acatccggtgtcatttctcgcctgttacttgaccagttcatcttctctcccgttttcatt 323
            |||| |||| |||| |||||||  ||||||| |||||||| ||||||||| ||||||||
Sbjct: 78  gcatcaggtgccattgctcgccttatacttgatcagttcattttctctcccattttcatt 137

                                                                       
Query: 324 ggtgtcttcatgagcttactcgtaaccttggagggaaagccatcacttgtagtgccaaag 383
           || ||||| ||||||||||| || ||||||||||||||||| || ||||| |||||||||
Sbjct: 138 ggcgtctttatgagcttactagtcaccttggagggaaagccctctcttgtggtgccaaag 197

                                                                       
Query: 384 cttaagcaggagtggttctcttcattgatcgcgaattggcaattgtggataccgttccag 443
           ||||||||||| ||||| || ||| || | |||||||||||||| |||||||| || |||
Sbjct: 198 cttaagcaggaatggttatcatcagtgttggcgaattggcaattatggataccatttcag 257

                      
Query: 444 tttttgaattt 454
           |||||||||||
Sbjct: 258 tttttgaattt 268
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>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0035B18, complete sequence
          Length = 123425

 Score =  107 bits (54), Expect = 3e-20
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                         
Query: 128   ccagcttgtaattgataaagtgccagagctagacctgaagagaacatttgtgttcacgct 187
             |||||||| |||||||||||||||| |||||||  |||||||||| ||||| |||||  |
Sbjct: 51550 ccagcttgcaattgataaagtgccaaagctagatttgaagagaacgtttgtattcacatt 51491

                                                       
Query: 188   attggggcttgtcctggtggggccaacgttgcatttctggta 229
              ||||| |||||||||||||||||||| |||||| |||||||
Sbjct: 51490 tttgggacttgtcctggtggggccaacattgcatgtctggta 51449



 Score =  105 bits (53), Expect = 1e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                         
Query: 297   cagttcatcttctctcccgttttcattggtgtcttcatgagcttactcgtaaccttggag 356
             |||||||| ||||||||| |||||||||| || || ||||| |||||||| |||||||||
Sbjct: 51165 cagttcattttctctcccattttcattggagtgtttatgagtttactcgtcaccttggag 51106

                                                  
Query: 357   ggaaagccatcacttgtagtgccaaagcttaagcagg 393
             |||||||| || |||||||| |||||||| |||||||
Sbjct: 51105 ggaaagccttctcttgtagttccaaagctcaagcagg 51069



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                         
Query: 390   caggagtggttctcttcattgatcgcgaattggcaattgtggataccgttccagtttttg 449
             ||||||||||| || ||| |||| ||||||||||||||||||||||| || ||||| |||
Sbjct: 50859 caggagtggttatcatcagtgattgcgaattggcaattgtggataccctttcagttcttg 50800

                                 
Query: 450   aatttctattttgtcccaca 469
             ||||| || |||||||||||
Sbjct: 50799 aatttttactttgtcccaca 50780



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                         
Query: 226   ggtacttgtatttgagtaaattagtgacaatcagcgggacatccggtgtcatttctcgcc 285
             |||||||||| ||||||||||||||||| ||||  ||  |||| ||||  ||| ||||||
Sbjct: 51364 ggtacttgtacttgagtaaattagtgacgatcaatggtgcatcaggtgcaattgctcgcc 51305

                       
Query: 286   tgttacttga 295
             | ||||||||
Sbjct: 51304 tcttacttga 51295



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                         
Query: 43    ggtaccttctgtctcttgacaagcatccggtggcgaccaaggctgtcacttctgctgtgc 102
             ||||||| ||| ||||||| ||||||||  |  | || |||||||| || ||||| || |
Sbjct: 52311 ggtacctgctggctcttgataagcatcccatcaccactaaggctgttacctctgccgtcc 52252

                                          
Query: 103   tgaccctggccggggacctcatctgccag 131
             | |||||| |||| |||||||||||||||
Sbjct: 52251 taaccctgaccggagacctcatctgccag 52223
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  107 bits (54), Expect = 3e-20
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                           
Query: 128     ccagcttgtaattgataaagtgccagagctagacctgaagagaacatttgtgttcacgct 187
               |||||||| |||||||||||||||| |||||||  |||||||||| ||||| |||||  |
Sbjct: 1432755 ccagcttgcaattgataaagtgccaaagctagatttgaagagaacgtttgtattcacatt 1432696

                                                         
Query: 188     attggggcttgtcctggtggggccaacgttgcatttctggta 229
                ||||| |||||||||||||||||||| |||||| |||||||
Sbjct: 1432695 tttgggacttgtcctggtggggccaacattgcatgtctggta 1432654



 Score =  105 bits (53), Expect = 1e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                           
Query: 297     cagttcatcttctctcccgttttcattggtgtcttcatgagcttactcgtaaccttggag 356
               |||||||| ||||||||| |||||||||| || || ||||| |||||||| |||||||||
Sbjct: 1432370 cagttcattttctctcccattttcattggagtgtttatgagtttactcgtcaccttggag 1432311

                                                    
Query: 357     ggaaagccatcacttgtagtgccaaagcttaagcagg 393
               |||||||| || |||||||| |||||||| |||||||
Sbjct: 1432310 ggaaagccttctcttgtagttccaaagctcaagcagg 1432274



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                           
Query: 390     caggagtggttctcttcattgatcgcgaattggcaattgtggataccgttccagtttttg 449
               ||||||||||| || ||| |||| ||||||||||||||||||||||| || ||||| |||
Sbjct: 1432064 caggagtggttatcatcagtgattgcgaattggcaattgtggataccctttcagttcttg 1432005

                                   
Query: 450     aatttctattttgtcccaca 469
               ||||| || |||||||||||
Sbjct: 1432004 aatttttactttgtcccaca 1431985



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                           
Query: 226     ggtacttgtatttgagtaaattagtgacaatcagcgggacatccggtgtcatttctcgcc 285
               |||||||||| ||||||||||||||||| ||||  ||  |||| ||||  ||| ||||||
Sbjct: 1432569 ggtacttgtacttgagtaaattagtgacgatcaatggtgcatcaggtgcaattgctcgcc 1432510

                         
Query: 286     tgttacttga 295
               | ||||||||
Sbjct: 1432509 tcttacttga 1432500



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                           
Query: 43      ggtaccttctgtctcttgacaagcatccggtggcgaccaaggctgtcacttctgctgtgc 102
               ||||||| ||| ||||||| ||||||||  |  | || |||||||| || ||||| || |
Sbjct: 1433516 ggtacctgctggctcttgataagcatcccatcaccactaaggctgttacctctgccgtcc 1433457

                                            
Query: 103     tgaccctggccggggacctcatctgccag 131
               | |||||| |||| |||||||||||||||
Sbjct: 1433456 taaccctgaccggagacctcatctgccag 1433428
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  107 bits (54), Expect = 3e-20
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                           
Query: 128     ccagcttgtaattgataaagtgccagagctagacctgaagagaacatttgtgttcacgct 187
               |||||||| |||||||||||||||| |||||||  |||||||||| ||||| |||||  |
Sbjct: 1430476 ccagcttgcaattgataaagtgccaaagctagatttgaagagaacgtttgtattcacatt 1430417

                                                         
Query: 188     attggggcttgtcctggtggggccaacgttgcatttctggta 229
                ||||| |||||||||||||||||||| |||||| |||||||
Sbjct: 1430416 tttgggacttgtcctggtggggccaacattgcatgtctggta 1430375



 Score =  105 bits (53), Expect = 1e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                           
Query: 297     cagttcatcttctctcccgttttcattggtgtcttcatgagcttactcgtaaccttggag 356
               |||||||| ||||||||| |||||||||| || || ||||| |||||||| |||||||||
Sbjct: 1430091 cagttcattttctctcccattttcattggagtgtttatgagtttactcgtcaccttggag 1430032

                                                    
Query: 357     ggaaagccatcacttgtagtgccaaagcttaagcagg 393
               |||||||| || |||||||| |||||||| |||||||
Sbjct: 1430031 ggaaagccttctcttgtagttccaaagctcaagcagg 1429995



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                           
Query: 390     caggagtggttctcttcattgatcgcgaattggcaattgtggataccgttccagtttttg 449
               ||||||||||| || ||| |||| ||||||||||||||||||||||| || ||||| |||
Sbjct: 1429785 caggagtggttatcatcagtgattgcgaattggcaattgtggataccctttcagttcttg 1429726

                                   
Query: 450     aatttctattttgtcccaca 469
               ||||| || |||||||||||
Sbjct: 1429725 aatttttactttgtcccaca 1429706



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                           
Query: 226     ggtacttgtatttgagtaaattagtgacaatcagcgggacatccggtgtcatttctcgcc 285
               |||||||||| ||||||||||||||||| ||||  ||  |||| ||||  ||| ||||||
Sbjct: 1430290 ggtacttgtacttgagtaaattagtgacgatcaatggtgcatcaggtgcaattgctcgcc 1430231

                         
Query: 286     tgttacttga 295
               | ||||||||
Sbjct: 1430230 tcttacttga 1430221



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                           
Query: 43      ggtaccttctgtctcttgacaagcatccggtggcgaccaaggctgtcacttctgctgtgc 102
               ||||||| ||| ||||||| ||||||||  |  | || |||||||| || ||||| || |
Sbjct: 1431237 ggtacctgctggctcttgataagcatcccatcaccactaaggctgttacctctgccgtcc 1431178

                                            
Query: 103     tgaccctggccggggacctcatctgccag 131
               | |||||| |||| |||||||||||||||
Sbjct: 1431177 taaccctgaccggagacctcatctgccag 1431149
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  105 bits (53), Expect = 1e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                           
Query: 297     cagttcatcttctctcccgttttcattggtgtcttcatgagcttactcgtaaccttggag 356
               |||||||| ||||||||| |||||||||| || || ||||| |||||||| |||||||||
Sbjct: 1336862 cagttcattttctctcccattttcattggagtgtttatgagtttactcgtcaccttggag 1336803

                                                    
Query: 357     ggaaagccatcacttgtagtgccaaagcttaagcagg 393
               |||||||| || |||||||| |||||||| |||||||
Sbjct: 1336802 ggaaagccttctcttgtagttccaaagctcaagcagg 1336766



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                           
Query: 128     ccagcttgtaattgataaagtgccagagctagacctgaagagaacatttgtgttcacgct 187
               |||||| | |||||||||||||||| |||||||  |||||||||| ||||| |||||  |
Sbjct: 1337251 ccagctcgcaattgataaagtgccaaagctagatttgaagagaacgtttgtattcacatt 1337192

                                                         
Query: 188     attggggcttgtcctggtggggccaacgttgcatttctggta 229
                ||||| || ||||||||||||||||| |||||| |||||||
Sbjct: 1337191 tttgggactcgtcctggtggggccaacattgcatgtctggta 1337150



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                           
Query: 390     caggagtggttctcttcattgatcgcgaattggcaattgtggataccgttccagtttttg 449
               ||||||||||| || ||| |||| || |||||||||||||||||||| || ||||| |||
Sbjct: 1336673 caggagtggttatcatcagtgattgcaaattggcaattgtggataccttttcagttcttg 1336614

                                   
Query: 450     aatttctattttgtcccaca 469
               ||||| || |||||||||||
Sbjct: 1336613 aatttttactttgtcccaca 1336594



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                           
Query: 43      ggtaccttctgtctcttgacaagcatccggtggcgaccaaggctgtcacttctgctgtgc 102
               ||||||| ||| ||||||| ||||||||  |  | || |||||||| || ||||| || |
Sbjct: 1338005 ggtacctgctggctcttgataagcatcccatcaccactaaggctgttacctctgccgtcc 1337946

                                            
Query: 103     tgaccctggccggggacctcatctgccag 131
               | |||||| |||| |||||||||||||||
Sbjct: 1337945 taaccctgaccggagacctcatctgccag 1337917



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 226     ggtacttgtatttgagtaaattagtga 252
               |||||||||| ||||||||||||||||
Sbjct: 1337058 ggtacttgtacttgagtaaattagtga 1337032
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  105 bits (53), Expect = 1e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                           
Query: 297     cagttcatcttctctcccgttttcattggtgtcttcatgagcttactcgtaaccttggag 356
               |||||||| ||||||||| |||||||||| || || ||||| |||||||| |||||||||
Sbjct: 1336862 cagttcattttctctcccattttcattggagtgtttatgagtttactcgtcaccttggag 1336803

                                                    
Query: 357     ggaaagccatcacttgtagtgccaaagcttaagcagg 393
               |||||||| || |||||||| |||||||| |||||||
Sbjct: 1336802 ggaaagccttctcttgtagttccaaagctcaagcagg 1336766



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                           
Query: 128     ccagcttgtaattgataaagtgccagagctagacctgaagagaacatttgtgttcacgct 187
               |||||| | |||||||||||||||| |||||||  |||||||||| ||||| |||||  |
Sbjct: 1337251 ccagctcgcaattgataaagtgccaaagctagatttgaagagaacgtttgtattcacatt 1337192

                                                         
Query: 188     attggggcttgtcctggtggggccaacgttgcatttctggta 229
                ||||| || ||||||||||||||||| |||||| |||||||
Sbjct: 1337191 tttgggactcgtcctggtggggccaacattgcatgtctggta 1337150



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                           
Query: 390     caggagtggttctcttcattgatcgcgaattggcaattgtggataccgttccagtttttg 449
               ||||||||||| || ||| |||| || |||||||||||||||||||| || ||||| |||
Sbjct: 1336673 caggagtggttatcatcagtgattgcaaattggcaattgtggataccttttcagttcttg 1336614

                                   
Query: 450     aatttctattttgtcccaca 469
               ||||| || |||||||||||
Sbjct: 1336613 aatttttactttgtcccaca 1336594



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                           
Query: 43      ggtaccttctgtctcttgacaagcatccggtggcgaccaaggctgtcacttctgctgtgc 102
               ||||||| ||| ||||||| ||||||||  |  | || |||||||| || ||||| || |
Sbjct: 1338005 ggtacctgctggctcttgataagcatcccatcaccactaaggctgttacctctgccgtcc 1337946

                                            
Query: 103     tgaccctggccggggacctcatctgccag 131
               | |||||| |||| |||||||||||||||
Sbjct: 1337945 taaccctgaccggagacctcatctgccag 1337917



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 226     ggtacttgtatttgagtaaattagtga 252
               |||||||||| ||||||||||||||||
Sbjct: 1337058 ggtacttgtacttgagtaaattagtga 1337032
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>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 157453

 Score =  105 bits (53), Expect = 1e-19
 Identities = 86/97 (88%)
 Strand = Plus / Plus

                                                                         
Query: 297   cagttcatcttctctcccgttttcattggtgtcttcatgagcttactcgtaaccttggag 356
             |||||||| ||||||||| |||||||||| || || ||||| |||||||| |||||||||
Sbjct: 92307 cagttcattttctctcccattttcattggagtgtttatgagtttactcgtcaccttggag 92366

                                                  
Query: 357   ggaaagccatcacttgtagtgccaaagcttaagcagg 393
             |||||||| || |||||||| |||||||| |||||||
Sbjct: 92367 ggaaagccttctcttgtagttccaaagctcaagcagg 92403



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 88/102 (86%)
 Strand = Plus / Plus

                                                                         
Query: 128   ccagcttgtaattgataaagtgccagagctagacctgaagagaacatttgtgttcacgct 187
             |||||| | |||||||||||||||| |||||||  |||||||||| ||||| |||||  |
Sbjct: 91918 ccagctcgcaattgataaagtgccaaagctagatttgaagagaacgtttgtattcacatt 91977

                                                       
Query: 188   attggggcttgtcctggtggggccaacgttgcatttctggta 229
              ||||| || ||||||||||||||||| |||||| |||||||
Sbjct: 91978 tttgggactcgtcctggtggggccaacattgcatgtctggta 92019



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                         
Query: 390   caggagtggttctcttcattgatcgcgaattggcaattgtggataccgttccagtttttg 449
             ||||||||||| || ||| |||| || |||||||||||||||||||| || ||||| |||
Sbjct: 92496 caggagtggttatcatcagtgattgcaaattggcaattgtggataccttttcagttcttg 92555

                                 
Query: 450   aatttctattttgtcccaca 469
             ||||| || |||||||||||
Sbjct: 92556 aatttttactttgtcccaca 92575



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 73/89 (82%)
 Strand = Plus / Plus

                                                                         
Query: 43    ggtaccttctgtctcttgacaagcatccggtggcgaccaaggctgtcacttctgctgtgc 102
             ||||||| ||| ||||||| ||||||||  |  | || |||||||| || ||||| || |
Sbjct: 91164 ggtacctgctggctcttgataagcatcccatcaccactaaggctgttacctctgccgtcc 91223

                                          
Query: 103   tgaccctggccggggacctcatctgccag 131
             | |||||| |||| |||||||||||||||
Sbjct: 91224 taaccctgaccggagacctcatctgccag 91252



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 226   ggtacttgtatttgagtaaattagtga 252
             |||||||||| ||||||||||||||||
Sbjct: 92111 ggtacttgtacttgagtaaattagtga 92137
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>ref|NM_121980.2| Arabidopsis thaliana unknown protein AT5G19750 mRNA, complete cds
          Length = 1166

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 210 ccaacgttgcatttctggtacttgtatttgagtaaattagtgaca 254
           ||||| |||||||||||||| ||||||||||| ||| | ||||||
Sbjct: 572 ccaacattgcatttctggtatttgtatttgagcaaagtggtgaca 616
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>gb|BT001037.1| Arabidopsis thaliana At5g19750/T29J13_170 mRNA, complete cds
          Length = 867

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 210 ccaacgttgcatttctggtacttgtatttgagtaaattagtgaca 254
           ||||| |||||||||||||| ||||||||||| ||| | ||||||
Sbjct: 517 ccaacattgcatttctggtatttgtatttgagcaaagtggtgaca 561
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>gb|AY058149.1| Arabidopsis thaliana AT5g19750/T29J13_170 mRNA, complete cds
          Length = 1130

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 210 ccaacgttgcatttctggtacttgtatttgagtaaattagtgaca 254
           ||||| |||||||||||||| ||||||||||| ||| | ||||||
Sbjct: 535 ccaacattgcatttctggtatttgtatttgagcaaagtggtgaca 579
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>gb|AY088454.1| Arabidopsis thaliana clone 6789 mRNA, complete sequence
          Length = 1140

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 210 ccaacgttgcatttctggtacttgtatttgagtaaattagtgaca 254
           ||||| |||||||||||||| ||||||||||| ||| | ||||||
Sbjct: 575 ccaacattgcatttctggtatttgtatttgagcaaagttgtgaca 619
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>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome
          Length = 3059876

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 372   gtagtgccaaagcttaagcagg 393
             ||||||||||||||||||||||
Sbjct: 15607 gtagtgccaaagcttaagcagg 15628
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>emb|CT025599.16| Mouse DNA sequence from clone RP24-254G12 on chromosome 14, complete
             sequence
          Length = 170436

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 445   ttttgaatttctattttgtccc 466
             ||||||||||||||||||||||
Sbjct: 64116 ttttgaatttctattttgtccc 64095
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>gb|AC154678.2| Mus musculus BAC clone RP24-302G10 from chromosome 16, complete sequence
          Length = 198982

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 370    ttgtagtgccaaagcttaagc 390
              |||||||||||||||||||||
Sbjct: 144761 ttgtagtgccaaagcttaagc 144741
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>ref|XM_414355.1| PREDICTED: Gallus gallus similar to anion exchanger SLC26A6a
            (LOC416012), mRNA
          Length = 2560

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 461  tgtcccacagaagctccagg 480
            ||||||||||||||||||||
Sbjct: 2415 tgtcccacagaagctccagg 2396
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>gb|AC134847.3| Mus musculus BAC clone RP24-171M1 from chromosome 6, complete sequence
          Length = 142649

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     tggtaccttctgtctcttga 61
              ||||||||||||||||||||
Sbjct: 105291 tggtaccttctgtctcttga 105310
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>gb|AC149486.1| Populus trichocarpa clone Pop1-8L22, complete sequence
          Length = 66066

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 443   gtttttgaatttctattttg 462
             ||||||||||||||||||||
Sbjct: 58729 gtttttgaatttctattttg 58748
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>gb|AC149543.1| Populus trichocarpa clone Pop1-47M20, complete sequence
          Length = 68256

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 443   gtttttgaatttctattttg 462
             ||||||||||||||||||||
Sbjct: 34412 gtttttgaatttctattttg 34431
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>gb|AC122905.3| Mus musculus BAC clone RP23-47A1 from 10, complete sequence
          Length = 152690

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 437   gttccagtttttgaatttctattt 460
             |||||||||||| |||||||||||
Sbjct: 36945 gttccagtttttaaatttctattt 36922
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>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 116     ggacctcatctgccagcttg 135
               ||||||||||||||||||||
Sbjct: 3242720 ggacctcatctgccagcttg 3242739
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>emb|AJ719425.1| Gallus gallus mRNA for hypothetical protein, clone 2c17
          Length = 3403

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 274  tcatttctcgcctgttacttgacc 297
            ||||||||||| ||||||||||||
Sbjct: 3221 tcatttctcgcttgttacttgacc 3244
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>ref|NM_001006350.1| Gallus gallus Der1-like domain family, member 1 (DERL1), mRNA
          Length = 3403

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 274  tcatttctcgcctgttacttgacc 297
            ||||||||||| ||||||||||||
Sbjct: 3221 tcatttctcgcttgttacttgacc 3244
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>emb|BX248581.17| Zebrafish DNA sequence from clone CH211-208O6 in linkage group 24,
              complete sequence
          Length = 202872

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    agctagacctgaagagaaca 173
              ||||||||||||||||||||
Sbjct: 159257 agctagacctgaagagaaca 159276
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>gb|AC078906.6| Homo sapiens, clone RP11-142A23, complete sequence
          Length = 156426

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 442   agtttttgaatttctatttt 461
             ||||||||||||||||||||
Sbjct: 69175 agtttttgaatttctatttt 69194
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>tpg|BK001240.1| TPA: TPA_exp: Homo sapiens growth arrest-specific 6 (GAS6) gene,
             complete cds
          Length = 45840

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   tgtcatttctcgcctgttac 291
             ||||||||||||||||||||
Sbjct: 19047 tgtcatttctcgcctgttac 19028
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>emb|BX930511.2| Gallus gallus finished cDNA, clone ChEST619h11
          Length = 771

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 461 tgtcccacagaagctccagg 480
           ||||||||||||||||||||
Sbjct: 608 tgtcccacagaagctccagg 589
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>emb|AL929225.6| Zebrafish DNA sequence from clone CH211-250A24, complete sequence
          Length = 151067

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    agctagacctgaagagaaca 173
              ||||||||||||||||||||
Sbjct: 139755 agctagacctgaagagaaca 139736
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>gb|AC124235.11| Mus musculus chromosome 13, clone RP23-273G24, complete sequence
          Length = 242383

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 452   tttctattttgtcccacaga 471
             ||||||||||||||||||||
Sbjct: 42169 tttctattttgtcccacaga 42188
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>emb|BX072579.14| Human DNA sequence from clone RP11-199F6 on chromosome 13 Contains the
             GAS6 gene for growth arrest-specific 6, six novel genes
             and ten CpG islands, complete sequence
          Length = 170020

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 272   tgtcatttctcgcctgttac 291
             ||||||||||||||||||||
Sbjct: 78821 tgtcatttctcgcctgttac 78840


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,286,308
Number of Sequences: 3902068
Number of extensions: 4286308
Number of successful extensions: 84993
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84818
Number of HSP's gapped (non-prelim): 175
length of query: 487
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 465
effective length of database: 17,147,199,772
effective search space: 7973447893980
effective search space used: 7973447893980
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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