ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags19h08 |
|---|---|
| Clone Library Name | barley_pub |
>KRA52_HUMAN (Q701N4) Keratin-associated protein 5-2 (Keratin-associated protein| 5.2) (Ultrahigh sulfur keratin-associated protein 5.2) (Keratin-associated protein 5-8) (Keratin-associated protein 5.8) Length = 177 Score = 34.3 bits (77), Expect = 0.16 Identities = 15/54 (27%), Positives = 21/54 (38%) Frame = +3 Query: 9 GPSGSCGAHRRSIPSCAELDNNT*RCHVGVTACCMPASQEHGVRPADCRLPCCQ 170 G GSCG + SC C ++CC P G + C+ CC+ Sbjct: 86 GGCGSCGGSKGGCGSCGGSKGGCGSCGCSQSSCCKPCCCSSGCGSSCCQSSCCK 139
>KRA54_HUMAN (Q6L8H1) Keratin-associated protein 5-4 (Keratin-associated protein| 5.4) (Ultrahigh sulfur keratin-associated protein 5.4) Length = 288 Score = 33.5 bits (75), Expect = 0.27 Identities = 15/54 (27%), Positives = 20/54 (37%) Frame = +3 Query: 9 GPSGSCGAHRRSIPSCAELDNNT*RCHVGVTACCMPASQEHGVRPADCRLPCCQ 170 G GSCG + SC C +CC P G + C+ CC+ Sbjct: 169 GGCGSCGGSKGGCGSCGGSKGGCGSCGCSQCSCCKPCCCSSGCGSSCCQSSCCK 222 Score = 28.9 bits (63), Expect = 6.7 Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Frame = +3 Query: 9 GPSGSCGAHRRSI--PSCAELDNNT*RCHVGVTACCMPASQEHGVRPADCRLPCCQ 170 G GSCG + S P C + C ++CC P G + C+ CC+ Sbjct: 189 GGCGSCGCSQCSCCKPCCCSSGCGSSCCQ---SSCCKPCCSSSGCGSSCCQSSCCK 241
>KRA56_HUMAN (Q6L8G9) Keratin-associated protein 5-6 (Keratin-associated protein| 5.6) (Ultrahigh sulfur keratin-associated protein 5.6) Length = 129 Score = 32.7 bits (73), Expect = 0.46 Identities = 15/54 (27%), Positives = 20/54 (37%) Frame = +3 Query: 9 GPSGSCGAHRRSIPSCAELDNNT*RCHVGVTACCMPASQEHGVRPADCRLPCCQ 170 G GSCG + SC C +CC P G + C+ CC+ Sbjct: 58 GCCGSCGGSKGGCGSCGGSKGGCGSCGCSQCSCCKPCYCSSGCGSSCCQSSCCK 111
>KR511_HUMAN (Q6L8G4) Keratin-associated protein 5-11 (Keratin-associated| protein 5.11) (Ultrahigh sulfur keratin-associated protein 5.11) Length = 156 Score = 31.6 bits (70), Expect = 1.0 Identities = 16/61 (26%), Positives = 20/61 (32%), Gaps = 10/61 (16%) Frame = +3 Query: 18 GSCGAHRRSIPSCAELDNNT*RCHVGVTACCMPASQEHGV----------RPADCRLPCC 167 GSCG + SC C + CC P G +P C+ CC Sbjct: 58 GSCGGSKGGCGSCGSSKGGCGSCGCSQSNCCKPCCSSSGCGSFCCQSSCSKPCCCQSSCC 117 Query: 168 Q 170 Q Sbjct: 118 Q 118
>FP2_MYTGA (Q25464) Adhesive plaque matrix protein 2 precursor (Foot protein| 2) (MGFP2) (MGFP-2) Length = 473 Score = 31.6 bits (70), Expect = 1.0 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%) Frame = +3 Query: 300 CY*DRPQGI*VRC-GGYEPPLHRRNICHVRQDEWPCEGAWTCSADRAG 440 C+ D G RC GY P + N C PC TCSAD+ G Sbjct: 170 CFPDGKTGYKCRCVDGYSGPTCQENACKPN----PCSNGGTCSADKFG 213
>YGLN_LACDE (P45624) Hypothetical 33.9 kDa protein in glnA 5'region (ORF306)| Length = 306 Score = 31.2 bits (69), Expect = 1.3 Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 8/98 (8%) Frame = +1 Query: 172 GLANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAIEIDRKVYEFVAGDMS 351 G+A +G YI VGK E V + A GI KE G + + +EF G Sbjct: 124 GIAQTGGYI--------VGKEELVENAAIRLTAPGIGKEEGATLTNM----HEFYEGFFL 171 Query: 352 HPCTDE--------IYAMLDKMNGLVKEHGHVPQTELV 441 P T A+L+KM V H P+T+L+ Sbjct: 172 APHTTGEAIKGMIFSAALLEKMGCEVTPKWHEPRTDLI 209
>BGAL_LACSK (Q48846) Beta-galactosidase large subunit (EC 3.2.1.23) (Lactase)| Length = 625 Score = 30.4 bits (67), Expect = 2.3 Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 6/134 (4%) Frame = +1 Query: 28 GLIEEAFHLVQSLTITPDAVMWVSLLAACRLHKNMALGQRIADFL-VANGLANSGMYILL 204 G+ +H TIT + W + R H N D L NG +G+Y++ Sbjct: 349 GVNRHEWHPETGRTITAEDEAW-DIACMQRNHINAVRTSHYPDRLSFYNGCDQAGIYMMA 407 Query: 205 SNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAIEIDRKVYEFVAGDMS---HPCTDEIY 375 + G W+++ V G E + ++ R +E +S +E Y Sbjct: 408 ETNLESHGSWQKMGAVEPSWNVPGSYDEWEAATLDRARTNFETFKNHVSILFWSLGNESY 467 Query: 376 A--MLDKMNGLVKE 411 A +L+KMN K+ Sbjct: 468 AGSVLEKMNAYYKQ 481
>MATK_ZAMFL (Q8MEX4) Maturase K (Intron maturase)| Length = 514 Score = 30.4 bits (67), Expect = 2.3 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 6/83 (7%) Frame = +1 Query: 79 DAVMWVSLLAACRLHKNMALGQRIADFLVANGLANSGMYILLSNIYA------AVGKWEE 240 DA SL H+N+ + + ++ N+ + + L N YA V W+ Sbjct: 170 DAPFLHSLRFVLHEHRNLIISSNLDQLILIASKENTRLSLFLWNSYAYECESLLVPLWKR 229 Query: 241 VARVRSMMKASGIQKEPGCSAIE 309 + RS+ S +++ P C IE Sbjct: 230 FSHSRSLPYESFVERTPFCRKIE 252
>TAL_BUCBP (Q89AY3) Transaldolase (EC 2.2.1.2)| Length = 316 Score = 30.0 bits (66), Expect = 3.0 Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Frame = +1 Query: 82 AVMWVSLLAACRLHK-----NMALGQRIADFLVANGLANSGMYILLSNIYAAVGKWEEVA 246 A W S+ AA L K N+ L + F A A +G+++ I VG+ + Sbjct: 133 AATWESVSAAKELKKENIQSNLTL---LFSFAQAKICAEAGVFL----ISPFVGRIYDWY 185 Query: 247 RVRSMMKASGIQKEPGCSAIEIDRKVYEF 333 + +S++K++ I +PG +A+ RK+Y++ Sbjct: 186 KSKSLIKSAMIDDDPGVNAV---RKIYQY 211
>YNC3_YEAST (P53971) RING finger protein YNL023C| Length = 965 Score = 30.0 bits (66), Expect = 3.0 Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 8/74 (10%) Frame = +3 Query: 21 SCGAHR-------RSIPSCAELDNNT*RCHVGVTACCMPASQEHGVRPADCRLPCCQWV- 176 SCG H+ P C E D+N C G T +PA G + C PC + V Sbjct: 467 SCGIHKCQRKCHPGKCPPCLESDSNDLVCPCGNTV--VPAPVRCGTKLPTCNHPCIKVVR 524 Query: 177 SQLRDVYPPFQHLC 218 + + P H C Sbjct: 525 GESTCGHKPMPHTC 538
>KRA92_HUMAN (Q9BYQ4) Keratin-associated protein 9-2 (Keratin-associated protein| 9.2) (Ultrahigh sulfur keratin-associated protein 9.2) Length = 174 Score = 29.3 bits (64), Expect = 5.1 Identities = 10/24 (41%), Positives = 12/24 (50%) Frame = +3 Query: 99 TACCMPASQEHGVRPADCRLPCCQ 170 T CC P +P+ C PCCQ Sbjct: 64 TTCCQPTCVTSCCQPSCCSTPCCQ 87
>KRA57_HUMAN (Q6L8G8) Keratin-associated protein 5-7 (Keratin-associated protein| 5.7) (Ultrahigh sulfur keratin-associated protein 5.7) (Keratin-associated protein 5-3) (Keratin-associated protein 5.3) Length = 165 Score = 29.3 bits (64), Expect = 5.1 Identities = 14/54 (25%), Positives = 19/54 (35%) Frame = +3 Query: 9 GPSGSCGAHRRSIPSCAELDNNT*RCHVGVTACCMPASQEHGVRPADCRLPCCQ 170 G GSCG + SC C +C P G + C+ CC+ Sbjct: 65 GGCGSCGGSKGGCGSCGGSKGGCGSCGCSQCSCYKPCCCSSGCGSSCCQSSCCK 118
>KRA55_HUMAN (Q701N2) Keratin-associated protein 5-5 (Keratin-associated protein| 5.5) (Ultrahigh sulfur keratin-associated protein 5.5) (Keratin-associated protein 5-11) (Keratin-associated protein 5.11) Length = 221 Score = 29.3 bits (64), Expect = 5.1 Identities = 14/54 (25%), Positives = 19/54 (35%) Frame = +3 Query: 9 GPSGSCGAHRRSIPSCAELDNNT*RCHVGVTACCMPASQEHGVRPADCRLPCCQ 170 G GSCG + SC +CC P G + C+ CC+ Sbjct: 121 GGCGSCGGSKGGCGSCGGSKGGCGSYGCSQCSCCKPCCCSSGCGSSCCQSSCCK 174
>GLADA_MICEC (Q70KD4) Putative L-glutamine:3-amino-2,3-dideoxy-scyllo-inosose| aminotransferase (EC 2.6.1.-) (Putative L-glutamine:amino-DOI aminotransferase) (Putative gentamicin aminotransferase II) Length = 418 Score = 29.3 bits (64), Expect = 5.1 Identities = 9/28 (32%), Positives = 16/28 (57%) Frame = +3 Query: 318 QGI*VRCGGYEPPLHRRNICHVRQDEWP 401 +G+ + PP+HR + H+ D+WP Sbjct: 327 EGVEFEGNTFYPPMHRDELFHITADDWP 354
>KRA58_HUMAN (O75690) Keratin-associated protein 5-8 (Keratin-associated protein| 5.8) (Ultrahigh sulfur keratin-associated protein 5.8) (Keratin, ultra high-sulfur matrix protein B) (UHS keratin B) (UHS KerB) Length = 187 Score = 29.3 bits (64), Expect = 5.1 Identities = 14/54 (25%), Positives = 19/54 (35%) Frame = +3 Query: 9 GPSGSCGAHRRSIPSCAELDNNT*RCHVGVTACCMPASQEHGVRPADCRLPCCQ 170 G GSCG + SC C +C P G + C+ CC+ Sbjct: 58 GGRGSCGGSKGDCGSCGGSKGGCGSCGCSQCSCYKPCCCSSGCGSSCCQSSCCK 111
>KR410_HUMAN (Q9BYQ7) Keratin-associated protein 4-10 (Keratin-associated| protein 4.10) (Ultrahigh sulfur keratin-associated protein 4.10) Length = 127 Score = 28.9 bits (63), Expect = 6.7 Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Frame = +3 Query: 21 SCGAHRRSIPSCAELDNNT*RCHVGVTACCMP-ASQEHGVRPADCRLPCC 167 SCG P C + T R GV++CC P Q R CR CC Sbjct: 77 SCGVSSCCRPLCCQ---TTCRPSCGVSSCCRPLCCQTTCCRTTCCRPSCC 123
>PURA_FUSNU (O68581) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 425 Score = 28.9 bits (63), Expect = 6.7 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +1 Query: 271 SGIQKEPGCSAIEIDRKVYEFVAGD 345 SG+ K C+A EID KVY++V D Sbjct: 334 SGLGKLKICTAYEIDGKVYDYVPAD 358
>KRA59_HUMAN (P26371) Keratin-associated protein 5-9 (Keratin-associated protein| 5.9) (Ultrahigh sulfur keratin-associated protein 5.9) (Keratin, cuticle, ultrahigh sulfur 1) (Keratin, ultra high-sulfur matrix protein A) (UHS keratin A) (UHS KerA) Length = 169 Score = 28.9 bits (63), Expect = 6.7 Identities = 17/68 (25%), Positives = 23/68 (33%) Frame = +3 Query: 21 SCGAHRRSIPSCAELDNNT*RCHVGVTACCMPASQEHGVRPADCRLPCCQWVSQLRDVYP 200 SCG +R SC C +CC P G + C+ CC+ Sbjct: 56 SCG--KRGCGSCGGSKGGCGSCGCSQCSCCKPCCCSSGCGSSCCQCSCCK---------- 103 Query: 201 PFQHLCXC 224 P+ C C Sbjct: 104 PYCSQCSC 111
>KRA93_HUMAN (Q9BYQ3) Keratin-associated protein 9-3 (Keratin-associated protein| 9.3) (Ultrahigh sulfur keratin-associated protein 9.3) Length = 159 Score = 28.9 bits (63), Expect = 6.7 Identities = 10/24 (41%), Positives = 12/24 (50%) Frame = +3 Query: 99 TACCMPASQEHGVRPADCRLPCCQ 170 T CC P +P+ C PCCQ Sbjct: 59 TTCCQPICVTSCCQPSCCSTPCCQ 82
>YPC2_ECOLI (P18128) Hypothetical 26.4 kDa protein (ORF 245)| Length = 245 Score = 28.9 bits (63), Expect = 6.7 Identities = 11/18 (61%), Positives = 12/18 (66%) Frame = -3 Query: 367 RRCRGGSYPPQRTHIPCG 314 RRCR G PP R +PCG Sbjct: 133 RRCRVGIRPPCRASVPCG 150
>KR510_HUMAN (Q6L8G5) Keratin-associated protein 5-10 (Keratin-associated| protein 5.10) (Ultrahigh sulfur keratin-associated protein 5.10) Length = 202 Score = 28.9 bits (63), Expect = 6.7 Identities = 16/56 (28%), Positives = 18/56 (32%), Gaps = 3/56 (5%) Frame = +3 Query: 9 GPSGSCGAHRRSIPSCAELDNNT*RCHVGVTACCMPASQEHGVR---PADCRLPCC 167 G GSCG + SC C CC P G + C PCC Sbjct: 112 GGCGSCGGSKGGCGSCGGSKGGCGSCGCSQCNCCKPCCCSSGCGSCCQSSCCNPCC 167
>POR_AVESA (P15904) Protochlorophyllide reductase (EC 1.3.1.33) (PCR)| (NADPH-protochlorophyllide oxidoreductase) (POR) (Fragment) Length = 313 Score = 28.5 bits (62), Expect = 8.7 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = +1 Query: 178 ANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPG 294 A+SG+ + + A GKW V R +KAS K G Sbjct: 7 ASSGLGLAAAKALAETGKWHVVMACRDFLKASKAAKAAG 45
>DHSD_MOUSE (Q9CXV1) Succinate dehydrogenase [ubiquinone] cytochrome b small| subunit, mitochondrial precursor (CybS) (Succinate-ubiquinone reductase membrane anchor subunit) (QPs3) (CII-4) (Succinate dehydrogenase complex subunit D) (Succinate-ubiquinone Length = 159 Score = 28.5 bits (62), Expect = 8.7 Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 3/61 (4%) Frame = +1 Query: 52 LVQSLTITPDAVMWVSLLAACRLHKNMALGQRIADFLVANGL---ANSGMYILLSNIYAA 222 L+ + + P +V+ SL AA LH + LGQ + D++ + L A +G+ L + +A Sbjct: 79 LIPAGYLNPCSVVDYSLAAALTLHSHWGLGQVVTDYVHGDTLPKAARAGLLALSALTFAG 138 Query: 223 V 225 + Sbjct: 139 L 139
>PROA_BORPE (Q7VWZ0) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 419 Score = 28.5 bits (62), Expect = 8.7 Identities = 15/38 (39%), Positives = 23/38 (60%) Frame = +1 Query: 118 LHKNMALGQRIADFLVANGLANSGMYILLSNIYAAVGK 231 LH N+ALG+ + L A GL + + ++ + AAVGK Sbjct: 155 LHSNVALGRIVQAGLQAAGLPTAAVQVIDTTDRAAVGK 192
>PROA_BORPA (Q7W9M7) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 419 Score = 28.5 bits (62), Expect = 8.7 Identities = 15/38 (39%), Positives = 23/38 (60%) Frame = +1 Query: 118 LHKNMALGQRIADFLVANGLANSGMYILLSNIYAAVGK 231 LH N+ALG+ + L A GL + + ++ + AAVGK Sbjct: 155 LHSNVALGRIVQAGLQAAGLPTAAVQVIDTTDRAAVGK 192
>PROA_BORBR (Q7WH30) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 419 Score = 28.5 bits (62), Expect = 8.7 Identities = 15/38 (39%), Positives = 23/38 (60%) Frame = +1 Query: 118 LHKNMALGQRIADFLVANGLANSGMYILLSNIYAAVGK 231 LH N+ALG+ + L A GL + + ++ + AAVGK Sbjct: 155 LHSNVALGRIVQAGLQAAGLPTAAVQVIDTTDRAAVGK 192
>PORA_WHEAT (Q41578) Protochlorophyllide reductase A, chloroplast precursor (EC| 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) Length = 388 Score = 28.5 bits (62), Expect = 8.7 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = +1 Query: 178 ANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPG 294 A+SG+ + + A GKW V R +KAS K G Sbjct: 82 ASSGLGLAAAKALAETGKWHVVMACRDFLKASKAAKAAG 120
>PORA_HORVU (P13653) Protochlorophyllide reductase A, chloroplast precursor (EC| 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) Length = 388 Score = 28.5 bits (62), Expect = 8.7 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = +1 Query: 178 ANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPG 294 A+SG+ + + A GKW V R +KAS K G Sbjct: 82 ASSGLGLAAAKALAETGKWHVVMACRDFLKASKAAKAAG 120
>XYLB_BACOV (P49943) Xylosidase/arabinosidase [Includes: Beta-xylosidase (EC| 3.2.1.37) (1,4-beta-D-xylan xylohydrolase) (Xylan 1,4-beta-xylosidase); Alpha-N-arabinofuranosidase (EC 3.2.1.55) (Arabinosidase)] Length = 325 Score = 28.5 bits (62), Expect = 8.7 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +1 Query: 370 IYAMLDKMNGLVKEHGHVPQTE 435 +Y+M D MNG +K+HG V TE Sbjct: 54 VYSMDDVMNGEIKDHGVVLSTE 75
>RF1_ORYSA (Q76C99) Rf1 protein, mitochondrial precursor (PPR protein)| (Fertility restorer) (Restorer for CMS) Length = 791 Score = 28.5 bits (62), Expect = 8.7 Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 1/82 (1%) Frame = +1 Query: 46 FHLVQSLTITPDAVMWVSLLAACRLHKNMALGQRIADFLVANGLANSGM-YILLSNIYAA 222 +H + I PD V + S++AA + M + + +V NG+ M Y + + Y + Sbjct: 219 YHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 278 Query: 223 VGKWEEVARVRSMMKASGIQKE 288 G+ +E M++ G++ + Sbjct: 279 SGQPKEAIGFLKKMRSDGVEPD 300
>DHSD_BOVIN (Q95123) Succinate dehydrogenase [ubiquinone] cytochrome b small| subunit, mitochondrial precursor (CybS) (Succinate-ubiquinone reductase membrane anchor subunit) (QPs3) (CII-4) (Succinate dehydrogenase complex subunit D) Length = 158 Score = 28.5 bits (62), Expect = 8.7 Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Frame = +1 Query: 52 LVQSLTITPDAVMWVSLLAACRLHKNMALGQRIADFLVANGL---ANSGMYILLSNIYAA 222 L+ + + P + M SL A LH + +GQ + D++ + + A +G+ +L + +A Sbjct: 78 LIPAAYLNPCSAMDYSLAATLTLHSHWGIGQVVTDYVHGDAVQKAAKTGLLVLSAFTFAG 137 Query: 223 V 225 + Sbjct: 138 L 138 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,635,050 Number of Sequences: 219361 Number of extensions: 1523496 Number of successful extensions: 4075 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 3918 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4068 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2968155324 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
