ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags19g06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009352.1| Triticum aestivum clone wlm96.pk0016.h12:fis, ful... 258 4e-66
2ref|XM_507318.1| PREDICTED Oryza sativa (japonica cultivar-group... 161 8e-37
3ref|XM_483619.1| Oryza sativa (japonica cultivar-group), mRNA 161 8e-37
4dbj|AK101517.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 8e-37
5dbj|AK063995.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 8e-37
6gb|BT016754.1| Zea mays clone Contig587 mRNA sequence 107 1e-20
7gb|AY105831.1| Zea mays PCO126824 mRNA sequence 107 1e-20
8ref|XM_483620.1| Oryza sativa (japonica cultivar-group), mRNA 94 2e-16
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 94 2e-16
10dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic D... 94 2e-16
11dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic D... 94 2e-16
12dbj|AK108562.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 2e-16
13dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 54 1e-04
14gb|AY244811.1| Malus x domestica NAD-dependent sorbitol dehydrog... 46 0.032
15ref|NM_203196.1| Arabidopsis thaliana oxidoreductase/ zinc ion b... 42 0.49
16ref|NM_124576.3| Arabidopsis thaliana oxidoreductase/ zinc ion b... 42 0.49
17gb|AY133848.1| Arabidopsis thaliana clone U10156 putative sorbit... 42 0.49
18gb|AF370161.1| Arabidopsis thaliana putative sorbitol dehydrogen... 42 0.49
19emb|BX832676.1|CNS09ZU0 Arabidopsis thaliana Full-length cDNA Co... 42 0.49
20emb|BX830141.1|CNS09ZZV Arabidopsis thaliana Full-length cDNA Co... 42 0.49
21emb|BX831761.1|CNS09ZM7 Arabidopsis thaliana Full-length cDNA Co... 42 0.49
22dbj|AK176901.1| Arabidopsis thaliana mRNA for sorbitol dehydroge... 42 0.49
23dbj|AB015478.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 0.49
24gb|AY707458.1| Malus x domestica NAD-dependent sorbital dehydrog... 40 2.0
25gb|AF323506.1| Malus x domestica sorbitol dehydrogenase (SDH3) m... 40 2.0
26dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 2.0
27ref|XM_524849.1| PREDICTED: Pan troglodytes similar to membrane ... 38 7.7
28gb|AY244814.1| Malus x domestica NAD-dependent sorbitol dehydrog... 38 7.7
29gb|AY244813.1| Malus x domestica NAD-dependent sorbitol dehydrog... 38 7.7
30gb|AY244809.1| Malus x domestica NAD-dependent sorbitol dehydrog... 38 7.7
31gb|AY280680.1| Epalpus signifer CAD (r) gene, partial cds 38 7.7
32gb|BC101028.1| Homo sapiens membrane metallo-endopeptidase-like ... 38 7.7
33gb|BC101027.2| Homo sapiens membrane metallo-endopeptidase-like ... 38 7.7
34gb|BC101030.1| Homo sapiens membrane metallo-endopeptidase-like ... 38 7.7
35gb|BC101029.2| Homo sapiens membrane metallo-endopeptidase-like ... 38 7.7
36emb|AL139246.20| Human DNA sequence from clone RP3-395M20 on chr... 38 7.7
37emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome;... 38 7.7
38dbj|AK093058.1| Homo sapiens cDNA FLJ35739 fis, clone TESTI20038... 38 7.7
39ref|NM_033467.2| Homo sapiens membrane metallo-endopeptidase-lik... 38 7.7
40gb|AF336981.1|AF336981 Homo sapiens neprilysin-like metallopepti... 38 7.7
41dbj|AB178014.1| Ralstonia solanacearum lrpF gene for leucine-ric... 38 7.7 
>gb|BT009352.1| Triticum aestivum clone wlm96.pk0016.h12:fis, full insert mRNA
           sequence
          Length = 933

 Score =  258 bits (130), Expect = 4e-66
 Identities = 148/156 (94%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgctgggtccttatgatgtgcgagtccggatgaaggcggngggcatctgcngcagcgacg 60
           ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 93  cgctgggtccttatgatgtgcgagtccggatgaaggcggtgggcatctgcggcagcgacg 152

                                                                       
Query: 61  tgcattacctgaagganatgcgcattgcccatttcgnggtgaaagagccgatggtgatcg 120
           |||||||||| ||||| ||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 153 tgcattacctcaaggagatgcgcattgcgcatttcgtggtgaaagagccgatggtgatcg 212

                                               
Query: 121 ggcacgagtgcgctggcatcatcnangaggtgggcg 156
           ||||||||||||||||||||||| | ||||||||||
Sbjct: 213 ggcacgagtgcgctggcatcatcgaggaggtgggcg 248
to top
>ref|XM_507318.1| PREDICTED Oryza sativa (japonica cultivar-group), P0623F08.37 mRNA
          Length = 1556

 Score =  161 bits (81), Expect = 8e-37
 Identities = 113/125 (90%)
 Strand = Plus / Plus

                                                                       
Query: 9   ccttatgatgtgcgagtccggatgaaggcggngggcatctgcngcagcgacgtgcattac 68
           ||||||||||| || |||||||||||||| | |||||||||| ||||||||||||| |||
Sbjct: 200 ccttatgatgtccgtgtccggatgaaggcagtgggcatctgcggcagcgacgtgcactac 259

                                                                       
Query: 69  ctgaagganatgcgcattgcccatttcgnggtgaaagagccgatggtgatcgggcacgag 128
           || | ||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||
Sbjct: 260 ctcagggagatgcgcattgcgcatttcgtggtgaaggagccgatggtgatcgggcacgag 319

                
Query: 129 tgcgc 133
           |||||
Sbjct: 320 tgcgc 324
to top
>ref|XM_483619.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1353

 Score =  161 bits (81), Expect = 8e-37
 Identities = 113/125 (90%)
 Strand = Plus / Plus

                                                                       
Query: 9   ccttatgatgtgcgagtccggatgaaggcggngggcatctgcngcagcgacgtgcattac 68
           ||||||||||| || |||||||||||||| | |||||||||| ||||||||||||| |||
Sbjct: 232 ccttatgatgtccgtgtccggatgaaggcagtgggcatctgcggcagcgacgtgcactac 291

                                                                       
Query: 69  ctgaagganatgcgcattgcccatttcgnggtgaaagagccgatggtgatcgggcacgag 128
           || | ||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||
Sbjct: 292 ctcagggagatgcgcattgcgcatttcgtggtgaaggagccgatggtgatcgggcacgag 351

                
Query: 129 tgcgc 133
           |||||
Sbjct: 352 tgcgc 356
to top
>dbj|AK101517.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046H09, full
           insert sequence
          Length = 1353

 Score =  161 bits (81), Expect = 8e-37
 Identities = 113/125 (90%)
 Strand = Plus / Plus

                                                                       
Query: 9   ccttatgatgtgcgagtccggatgaaggcggngggcatctgcngcagcgacgtgcattac 68
           ||||||||||| || |||||||||||||| | |||||||||| ||||||||||||| |||
Sbjct: 232 ccttatgatgtccgtgtccggatgaaggcagtgggcatctgcggcagcgacgtgcactac 291

                                                                       
Query: 69  ctgaagganatgcgcattgcccatttcgnggtgaaagagccgatggtgatcgggcacgag 128
           || | ||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||
Sbjct: 292 ctcagggagatgcgcattgcgcatttcgtggtgaaggagccgatggtgatcgggcacgag 351

                
Query: 129 tgcgc 133
           |||||
Sbjct: 352 tgcgc 356
to top
>dbj|AK063995.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-E11, full
           insert sequence
          Length = 1556

 Score =  161 bits (81), Expect = 8e-37
 Identities = 113/125 (90%)
 Strand = Plus / Plus

                                                                       
Query: 9   ccttatgatgtgcgagtccggatgaaggcggngggcatctgcngcagcgacgtgcattac 68
           ||||||||||| || |||||||||||||| | |||||||||| ||||||||||||| |||
Sbjct: 200 ccttatgatgtccgtgtccggatgaaggcagtgggcatctgcggcagcgacgtgcactac 259

                                                                       
Query: 69  ctgaagganatgcgcattgcccatttcgnggtgaaagagccgatggtgatcgggcacgag 128
           || | ||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||
Sbjct: 260 ctcagggagatgcgcattgcgcatttcgtggtgaaggagccgatggtgatcgggcacgag 319

                
Query: 129 tgcgc 133
           |||||
Sbjct: 320 tgcgc 324
to top
>gb|BT016754.1| Zea mays clone Contig587 mRNA sequence
          Length = 1458

 Score =  107 bits (54), Expect = 1e-20
 Identities = 123/148 (83%)
 Strand = Plus / Plus

                                                                       
Query: 9   ccttatgatgtgcgagtccggatgaaggcggngggcatctgcngcagcgacgtgcattac 68
           ||||||||||| || || || |||||||| | ||| || ||| ||||||| ||||| |||
Sbjct: 217 ccttatgatgtccgcgtgcgcatgaaggcagtggggatttgcggcagcgatgtgcactac 276

                                                                       
Query: 69  ctgaagganatgcgcattgcccatttcgnggtgaaagagccgatggtgatcgggcacgag 128
           || | ||| |||||||| || || |||| |||||| ||||||||||||||||||||||||
Sbjct: 277 ctaagggagatgcgcatcgcgcacttcgtggtgaaggagccgatggtgatcgggcacgag 336

                                       
Query: 129 tgcgctggcatcatcnangaggtgggcg 156
           ||||| ||| |  || | ||||||||||
Sbjct: 337 tgcgcgggcgtggtcgaggaggtgggcg 364
to top
>gb|AY105831.1| Zea mays PCO126824 mRNA sequence
          Length = 1463

 Score =  107 bits (54), Expect = 1e-20
 Identities = 123/148 (83%)
 Strand = Plus / Plus

                                                                       
Query: 9   ccttatgatgtgcgagtccggatgaaggcggngggcatctgcngcagcgacgtgcattac 68
           ||||||||||| || || || |||||||| | ||| || ||| ||||||| ||||| |||
Sbjct: 298 ccttatgatgtccgcgtgcgcatgaaggcagtggggatttgcggcagcgatgtgcactac 357

                                                                       
Query: 69  ctgaagganatgcgcattgcccatttcgnggtgaaagagccgatggtgatcgggcacgag 128
           || | ||| |||||||| || || |||| |||||| ||||||||||||||||||||||||
Sbjct: 358 ctcagggagatgcgcatcgcgcacttcgtggtgaaggagccgatggtgatcgggcacgag 417

                                       
Query: 129 tgcgctggcatcatcnangaggtgggcg 156
           ||||| ||| |  || | ||||||||||
Sbjct: 418 tgcgcgggcgtggtcgaggaggtgggcg 445
to top
>ref|XM_483620.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1131

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 57/61 (93%)
 Strand = Plus / Minus

                                                                        
Query: 73   agganatgcgcattgcccatttcgnggtgaaagagccgatggtgatcgggcacgagtgcg 132
            |||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 1083 aggagatgcgcattgcgcatttcgtggtgaaggagccgatggtgatcgggcacgagtgcg 1024

             
Query: 133  c 133
            |
Sbjct: 1023 c 1023
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 57/61 (93%)
 Strand = Plus / Plus

                                                                            
Query: 73       agganatgcgcattgcccatttcgnggtgaaagagccgatggtgatcgggcacgagtgcg 132
                |||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 27309852 aggagatgcgcattgcgcatttcgtggtgaaggagccgatggtgatcgggcacgagtgcg 27309911

                 
Query: 133      c 133
                |
Sbjct: 27309912 c 27309912



 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                            
Query: 9        ccttatgatgtgcgagtccggatgaaggcggngggcatctgcngcagcgacgtgcattac 68
                ||||||||||| || |||||||||||||| | |||||||||| ||||||||||||| |||
Sbjct: 27309713 ccttatgatgtccgtgtccggatgaaggcagtgggcatctgcggcagcgacgtgcactac 27309772

                  
Query: 69       ct 70
                ||
Sbjct: 27309773 ct 27309774
to top
>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0623F08
          Length = 154540

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 57/61 (93%)
 Strand = Plus / Plus

                                                                          
Query: 73     agganatgcgcattgcccatttcgnggtgaaagagccgatggtgatcgggcacgagtgcg 132
              |||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 133055 aggagatgcgcattgcgcatttcgtggtgaaggagccgatggtgatcgggcacgagtgcg 133114

               
Query: 133    c 133
              |
Sbjct: 133115 c 133115



 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                          
Query: 9      ccttatgatgtgcgagtccggatgaaggcggngggcatctgcngcagcgacgtgcattac 68
              ||||||||||| || |||||||||||||| | |||||||||| ||||||||||||| |||
Sbjct: 132916 ccttatgatgtccgtgtccggatgaaggcagtgggcatctgcggcagcgacgtgcactac 132975

                
Query: 69     ct 70
              ||
Sbjct: 132976 ct 132977
to top
>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1323_A06
          Length = 95665

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 57/61 (93%)
 Strand = Plus / Plus

                                                                         
Query: 73    agganatgcgcattgcccatttcgnggtgaaagagccgatggtgatcgggcacgagtgcg 132
             |||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 11379 aggagatgcgcattgcgcatttcgtggtgaaggagccgatggtgatcgggcacgagtgcg 11438

              
Query: 133   c 133
             |
Sbjct: 11439 c 11439



 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                         
Query: 9     ccttatgatgtgcgagtccggatgaaggcggngggcatctgcngcagcgacgtgcattac 68
             ||||||||||| || |||||||||||||| | |||||||||| ||||||||||||| |||
Sbjct: 11240 ccttatgatgtccgtgtccggatgaaggcagtgggcatctgcggcagcgacgtgcactac 11299

               
Query: 69    ct 70
             ||
Sbjct: 11300 ct 11301
to top
>dbj|AK108562.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-B12, full
            insert sequence
          Length = 1131

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 57/61 (93%)
 Strand = Plus / Minus

                                                                        
Query: 73   agganatgcgcattgcccatttcgnggtgaaagagccgatggtgatcgggcacgagtgcg 132
            |||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 1083 aggagatgcgcattgcgcatttcgtggtgaaggagccgatggtgatcgggcacgagtgcg 1024

             
Query: 133  c 133
            |
Sbjct: 1023 c 1023
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                            
Query: 107     gccgatggtgatcgggcacgagtgcgctggcatcatcnangaggt 151
               |||||||||| ||||||||||| |||| ||||||||| | |||||
Sbjct: 1326354 gccgatggtgctcgggcacgagggcgcgggcatcatcgaggaggt 1326398
to top
>gb|AY244811.1| Malus x domestica NAD-dependent sorbitol dehydrogenase 5 gene,
           partial cds
          Length = 997

 Score = 46.1 bits (23), Expect = 0.032
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 102 aaagagccgatggtgatcgggcacgagtgcgctgg 136
           |||||||||||||||||||| || ||||| |||||
Sbjct: 267 aaagagccgatggtgatcggacatgagtgtgctgg 301
to top
>ref|NM_203196.1| Arabidopsis thaliana oxidoreductase/ zinc ion binding AT5G51970
           transcript variant AT5G51970.2 mRNA, complete cds
          Length = 1357

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 98  ggtgaaagagccgatggtgat 118
           |||||||||||||||||||||
Sbjct: 353 ggtgaaagagccgatggtgat 373
to top
>ref|NM_124576.3| Arabidopsis thaliana oxidoreductase/ zinc ion binding AT5G51970
           transcript variant AT5G51970.1 mRNA, complete cds
          Length = 1589

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 98  ggtgaaagagccgatggtgat 118
           |||||||||||||||||||||
Sbjct: 585 ggtgaaagagccgatggtgat 605
to top
>gb|AY133848.1| Arabidopsis thaliana clone U10156 putative sorbitol dehydrogenase
           (At5g51970) mRNA, complete cds
          Length = 1126

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 98  ggtgaaagagccgatggtgat 118
           |||||||||||||||||||||
Sbjct: 210 ggtgaaagagccgatggtgat 230
to top
>gb|AF370161.1| Arabidopsis thaliana putative sorbitol dehydrogenase (At5g51970)
           mRNA, complete cds
          Length = 1269

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 98  ggtgaaagagccgatggtgat 118
           |||||||||||||||||||||
Sbjct: 262 ggtgaaagagccgatggtgat 282
to top
>emb|BX832676.1|CNS09ZU0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH8ZA06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1344

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 98  ggtgaaagagccgatggtgat 118
           |||||||||||||||||||||
Sbjct: 353 ggtgaaagagccgatggtgat 373
to top
>emb|BX830141.1|CNS09ZZV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB61ZH10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1556

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 98  ggtgaaagagccgatggtgat 118
           |||||||||||||||||||||
Sbjct: 585 ggtgaaagagccgatggtgat 605
to top
>emb|BX831761.1|CNS09ZM7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH28ZE03 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1304

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 98  ggtgaaagagccgatggtgat 118
           |||||||||||||||||||||
Sbjct: 353 ggtgaaagagccgatggtgat 373
to top
>dbj|AK176901.1| Arabidopsis thaliana mRNA for sorbitol dehydrogenase-like protein,
           complete cds, clone: RAFL25-46-D10
          Length = 1737

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 98  ggtgaaagagccgatggtgat 118
           |||||||||||||||||||||
Sbjct: 725 ggtgaaagagccgatggtgat 745
to top
>dbj|AB015478.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSG15
          Length = 81347

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 98    ggtgaaagagccgatggtgat 118
             |||||||||||||||||||||
Sbjct: 13710 ggtgaaagagccgatggtgat 13730
to top
>gb|AY707458.1| Malus x domestica NAD-dependent sorbital dehydrogenase 8 mRNA,
           partial cds
          Length = 377

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 105 gagccgatggtgatcgggcacgagtgcgctgg 136
           ||||||||||||||||| || ||||| |||||
Sbjct: 1   gagccgatggtgatcggacatgagtgtgctgg 32
to top
>gb|AF323506.1| Malus x domestica sorbitol dehydrogenase (SDH3) mRNA, complete cds
          Length = 1521

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 102 aaagagccgatggtgatcgg 121
           ||||||||||||||||||||
Sbjct: 361 aaagagccgatggtgatcgg 380
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 105     gagccgatggtgatcgggcacgag 128
               |||||||||||| |||||||||||
Sbjct: 7927623 gagccgatggtgctcgggcacgag 7927600
to top
>ref|XM_524849.1| PREDICTED: Pan troglodytes similar to membrane
            metallo-endopeptidase-like 2; zinc metallopeptidase
            (LOC469465), mRNA
          Length = 9609

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 110  gatggtgatcgggcacgag 128
            |||||||||||||||||||
Sbjct: 8565 gatggtgatcgggcacgag 8583
to top
>gb|AY244814.1| Malus x domestica NAD-dependent sorbitol dehydrogenase 6 gene,
           partial cds
          Length = 1163

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 31/35 (88%)
 Strand = Plus / Plus

                                              
Query: 102 aaagagccgatggtgatcgggcacgagtgcgctgg 136
           ||||| |||||||||||||| || ||||| |||||
Sbjct: 245 aaagaaccgatggtgatcggacatgagtgtgctgg 279
to top
>gb|AY244813.1| Malus x domestica NAD-dependent sorbitol dehydrogenase 7 gene,
           partial cds
          Length = 1085

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 31/35 (88%)
 Strand = Plus / Plus

                                              
Query: 102 aaagagccgatggtgatcgggcacgagtgcgctgg 136
           ||||| |||||||||||||| || ||||| |||||
Sbjct: 245 aaagaaccgatggtgatcggacatgagtgtgctgg 279
to top
>gb|AY244809.1| Malus x domestica NAD-dependent sorbitol dehydrogenase 3 gene,
           partial cds
          Length = 1098

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 34/39 (87%)
 Strand = Plus / Plus

                                                  
Query: 98  ggtgaaagagccgatggtgatcgggcacgagtgcgctgg 136
           ||||||||| || ||||||||||| || ||||| |||||
Sbjct: 254 ggtgaaagaaccaatggtgatcggacatgagtgtgctgg 292
to top
>gb|AY280680.1| Epalpus signifer CAD (r) gene, partial cds
          Length = 4009

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 98  ggtgaaagagccgatggtg 116
           |||||||||||||||||||
Sbjct: 357 ggtgaaagagccgatggtg 375
to top
>gb|BC101028.1| Homo sapiens membrane metallo-endopeptidase-like 1, mRNA (cDNA clone
            MGC:119455 IMAGE:40007699), complete cds
          Length = 1943

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 110  gatggtgatcgggcacgag 128
            |||||||||||||||||||
Sbjct: 1363 gatggtgatcgggcacgag 1381
to top
>gb|BC101027.2| Homo sapiens membrane metallo-endopeptidase-like 1, mRNA (cDNA clone
            MGC:119454 IMAGE:40007698), complete cds
          Length = 2414

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 110  gatggtgatcgggcacgag 128
            |||||||||||||||||||
Sbjct: 1834 gatggtgatcgggcacgag 1852
to top
>gb|BC101030.1| Homo sapiens membrane metallo-endopeptidase-like 1, mRNA (cDNA clone
            MGC:119457 IMAGE:40007706), complete cds
          Length = 2414

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 110  gatggtgatcgggcacgag 128
            |||||||||||||||||||
Sbjct: 1834 gatggtgatcgggcacgag 1852
to top
>gb|BC101029.2| Homo sapiens membrane metallo-endopeptidase-like 1, mRNA (cDNA clone
            MGC:119456 IMAGE:40007702), complete cds
          Length = 2443

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 110  gatggtgatcgggcacgag 128
            |||||||||||||||||||
Sbjct: 1863 gatggtgatcgggcacgag 1881
to top
>emb|AL139246.20| Human DNA sequence from clone RP3-395M20 on chromosome 1p36.11-36.33
              Contains two genes for novel proteins (KIAA0450, FLJ00417,
              FLJ00414, FLJ00222, MGC26818, FLJ32465, DKFZp547M123,
              FLJ37582, ), five novel genes (FLJ11705, FLJ46690), the
              PANK4 gene for pantothenate kinase 4, the gene for a novel
              protein (ortholog of rodent hairy and enhancer of split 5
              (Drosophila) (Hes5)), the TNFRSF14 gene for tumor necrosis
              factor receptor superfamily member 14 (herpesvirus entry
              mediator), the 3' end of the MMEL2 gene for membrane
              metallo-endopeptidase-like 2 and three CpG islands,
              complete sequence
          Length = 154736

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 110    gatggtgatcgggcacgag 128
              |||||||||||||||||||
Sbjct: 147047 gatggtgatcgggcacgag 147029
to top
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7
          Length = 348071

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 98    ggtgaaagagccgatggtgatcg 120
             ||||||||||| |||||||||||
Sbjct: 67053 ggtgaaagagctgatggtgatcg 67075
to top
>dbj|AK093058.1| Homo sapiens cDNA FLJ35739 fis, clone TESTI2003824, moderately
            similar to Mus musculus neprilysin-like metallopeptidase
            1 (Nl1) mRNA
          Length = 2850

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 110  gatggtgatcgggcacgag 128
            |||||||||||||||||||
Sbjct: 1986 gatggtgatcgggcacgag 2004
to top
>ref|NM_033467.2| Homo sapiens membrane metallo-endopeptidase-like 1 (MMEL1), mRNA
          Length = 2850

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 110  gatggtgatcgggcacgag 128
            |||||||||||||||||||
Sbjct: 1986 gatggtgatcgggcacgag 2004
to top
>gb|AF336981.1|AF336981 Homo sapiens neprilysin-like metallopeptidase 2 mRNA, complete cds
          Length = 2784

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 110  gatggtgatcgggcacgag 128
            |||||||||||||||||||
Sbjct: 1861 gatggtgatcgggcacgag 1879
to top
>dbj|AB178014.1| Ralstonia solanacearum lrpF gene for leucine-rich repeat protein,
           complete cds
          Length = 3540

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                 
Query: 42  ggcatctgcngcagcgacgtgc 63
           ||||||||| ||||||||||||
Sbjct: 163 ggcatctgccgcagcgacgtgc 142


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 464,071
Number of Sequences: 3902068
Number of extensions: 464071
Number of successful extensions: 23309
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 23177
Number of HSP's gapped (non-prelim): 132
length of query: 160
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 138
effective length of database: 17,147,199,772
effective search space: 2366313568536
effective search space used: 2366313568536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
to top