ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags19g01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_483547.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2097 Score = 747 bits (377), Expect = 0.0 Identities = 606/681 (88%), Gaps = 1/681 (0%) Strand = Plus / Plus Query: 31 gatgacctctcaccaga-gaactcggtgcaaagatcaaggaatatggcattgttgcccct 89 |||||||| ||| |||| ||||| || |||||||| ||||||||||| |||||||||||| Sbjct: 634 gatgacctttcagcagatgaacttggcgcaaagattaaggaatatgggattgttgcccct 693 Query: 90 gatacaaagaacccactctctgctccctatccattcaatcttatgttccagacatcaatt 149 ||||| |||||||| ||||||| |||||| || ||||||||||||||||||||||| || Sbjct: 694 gatactaagaacccgctctctgatccctacccgttcaatcttatgttccagacatccatc 753 Query: 150 ggcccaacaggtcttagcgtgggctatatgaggccagagactgcacagggtatttttgtc 209 ||||| || ||||||| || || |||||||| ||||| || |||||||||||||||||| Sbjct: 754 ggccctaccggtcttaatgttgggtatatgagaccagaaacagcacagggtatttttgtc 813 Query: 210 aacttcaaggacttgtactactacaatggccaaaaacttccctttgcagcagctcaaatt 269 |||||||||||||||||||| ||||| || ||||| || || || |||||||||||||| Sbjct: 814 aacttcaaggacttgtactattacaacgggcaaaagctccctttcgcagcagctcaaatc 873 Query: 270 ggtcaagcattccgtaacgagatctctccgcgtcaaggtcttctacgagtgcgtgaattc 329 || |||||||||||||| ||||| ||||| || |||||||||||||| |||||||||||| Sbjct: 874 gggcaagcattccgtaatgagatttctccacgacaaggtcttctacgtgtgcgtgaattc 933 Query: 330 acattggccgagattgagcactttgtagatcctgaggataagtcacatcccaagtttgtt 389 ||||| |||||||||||||||||||| |||||||||||||| || || || || |||||| Sbjct: 934 acattagccgagattgagcactttgtggatcctgaggataaatctcacccaaaatttgtt 993 Query: 390 gatgttgctgatttggagtttttgatgtttccgagagagctgcaactctcaggggagtcg 449 |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 994 gatgttgctgatttggagtttttgatgtttccaagagagctgcaactttcaggggagtca 1053 Query: 450 gccaagttaacgaagcttgcggaagcagtttcgaagggaactgttaataatgagacactt 509 ||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct: 1054 gccaagttagtgaagcttggggaagcagtttcaaagggaactgttaataatgagacactt 1113 Query: 510 ggttactttattggaagggtctatcttttcctgacacgtttgggaattgataagtgccga 569 |||||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||| Sbjct: 1114 ggttacttcattgggagggtctatcttttcctaacacgtttgggtattgataaaaaccgg 1173 Query: 570 ttgcgcttcagacagcatctacctaatgagatggctcattatgccgctgactgctgggat 629 | |||||||| ||||||||||||||||||||||| |||||||| |||||||| |||||| Sbjct: 1174 ctacgcttcaggcagcatctacctaatgagatggcccattatgctgctgactgttgggat 1233 Query: 630 gcggagattgagtgttcttatggatggatagagtgtgtgggcattgcagatagatctgca 689 || ||||||||||| ||||| ||||||||||| |||||||||||||| || |||||||| Sbjct: 1234 gcagagattgagtgctcttacggatggatagaatgtgtgggcattgctgacagatctgcg 1293 Query: 690 tatgatttaaaagctcattct 710 |||||||| |||||||||| Sbjct: 1294 tatgatttgcgagctcattct 1314
>dbj|AK119836.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-178-B03, full insert sequence Length = 2495 Score = 747 bits (377), Expect = 0.0 Identities = 606/681 (88%), Gaps = 1/681 (0%) Strand = Plus / Plus Query: 31 gatgacctctcaccaga-gaactcggtgcaaagatcaaggaatatggcattgttgcccct 89 |||||||| ||| |||| ||||| || |||||||| ||||||||||| |||||||||||| Sbjct: 719 gatgacctttcagcagatgaacttggcgcaaagattaaggaatatgggattgttgcccct 778 Query: 90 gatacaaagaacccactctctgctccctatccattcaatcttatgttccagacatcaatt 149 ||||| |||||||| ||||||| |||||| || ||||||||||||||||||||||| || Sbjct: 779 gatactaagaacccgctctctgatccctacccgttcaatcttatgttccagacatccatc 838 Query: 150 ggcccaacaggtcttagcgtgggctatatgaggccagagactgcacagggtatttttgtc 209 ||||| || ||||||| || || |||||||| ||||| || |||||||||||||||||| Sbjct: 839 ggccctaccggtcttaatgttgggtatatgagaccagaaacagcacagggtatttttgtc 898 Query: 210 aacttcaaggacttgtactactacaatggccaaaaacttccctttgcagcagctcaaatt 269 |||||||||||||||||||| ||||| || ||||| || || || |||||||||||||| Sbjct: 899 aacttcaaggacttgtactattacaacgggcaaaagctccctttcgcagcagctcaaatc 958 Query: 270 ggtcaagcattccgtaacgagatctctccgcgtcaaggtcttctacgagtgcgtgaattc 329 || |||||||||||||| ||||| ||||| || |||||||||||||| |||||||||||| Sbjct: 959 gggcaagcattccgtaatgagatttctccacgacaaggtcttctacgtgtgcgtgaattc 1018 Query: 330 acattggccgagattgagcactttgtagatcctgaggataagtcacatcccaagtttgtt 389 ||||| |||||||||||||||||||| |||||||||||||| || || || || |||||| Sbjct: 1019 acattagccgagattgagcactttgtggatcctgaggataaatctcacccaaaatttgtt 1078 Query: 390 gatgttgctgatttggagtttttgatgtttccgagagagctgcaactctcaggggagtcg 449 |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 1079 gatgttgctgatttggagtttttgatgtttccaagagagctgcaactttcaggggagtca 1138 Query: 450 gccaagttaacgaagcttgcggaagcagtttcgaagggaactgttaataatgagacactt 509 ||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct: 1139 gccaagttagtgaagcttggggaagcagtttcaaagggaactgttaataatgagacactt 1198 Query: 510 ggttactttattggaagggtctatcttttcctgacacgtttgggaattgataagtgccga 569 |||||||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||| Sbjct: 1199 ggttacttcattgggagggtctatcttttcctaacacgtttgggtattgataaaaaccgg 1258 Query: 570 ttgcgcttcagacagcatctacctaatgagatggctcattatgccgctgactgctgggat 629 | |||||||| ||||||||||||||||||||||| |||||||| |||||||| |||||| Sbjct: 1259 ctacgcttcaggcagcatctacctaatgagatggcccattatgctgctgactgttgggat 1318 Query: 630 gcggagattgagtgttcttatggatggatagagtgtgtgggcattgcagatagatctgca 689 || ||||||||||| ||||| ||||||||||| |||||||||||||| || |||||||| Sbjct: 1319 gcagagattgagtgctcttacggatggatagaatgtgtgggcattgctgacagatctgcg 1378 Query: 690 tatgatttaaaagctcattct 710 |||||||| |||||||||| Sbjct: 1379 tatgatttgcgagctcattct 1399
>gb|BT018382.1| Zea mays clone EL01N0308D02.d mRNA sequence Length = 1655 Score = 504 bits (254), Expect = e-139 Identities = 425/482 (88%) Strand = Plus / Plus Query: 225 tactactacaatggccaaaaacttccctttgcagcagctcaaattggtcaagcattccgt 284 ||||| |||||||||||||| || || |||||||| ||||||||||| ||||| || | Sbjct: 1 tactattacaatggccaaaagctcccttttgcagctgctcaaattgggcaagcttttaga 60 Query: 285 aacgagatctctccgcgtcaaggtcttctacgagtgcgtgaattcacattggccgagatt 344 |||||||| || || ||||| ||||| ||||| ||||||||||||||||| |||||| Sbjct: 61 tttgagatctcgccacgacaaggacttctccgagtccgtgaattcacattggcagagatt 120 Query: 345 gagcactttgtagatcctgaggataagtcacatcccaagtttgttgatgttgctgatttg 404 ||||| ||||| || || ||||| || |||||||| || ||||||||||||||||||||| Sbjct: 121 gagcattttgtggacccagaggacaaatcacatccaaaatttgttgatgttgctgatttg 180 Query: 405 gagtttttgatgtttccgagagagctgcaactctcaggggagtcggccaagttaacgaag 464 ||||| |||||||||| ||||||||||||||||| |||||||| |||||| ||| |||| Sbjct: 181 gagttcctgatgtttccaagagagctgcaactctctggggagtcagccaagctaatgaag 240 Query: 465 cttgcggaagcagtttcgaagggaactgttaataatgagacacttggttactttattgga 524 |||| |||||||||||| |||||||||||||||||||| ||||||||||| |||||| Sbjct: 241 cttggggaagcagtttcaaagggaactgttaataatgattttcttggttacttcattgga 300 Query: 525 agggtctatcttttcctgacacgtttgggaattgataagtgccgattgcgcttcagacag 584 ||||||||||||||||||||| | ||||||||||||||| |||| ||||||||||| ||| Sbjct: 301 agggtctatcttttcctgacaagcttgggaattgataagggccggttgcgcttcaggcag 360 Query: 585 catctacctaatgagatggctcattatgccgctgactgctgggatgcggagattgagtgt 644 ||||||||||||||||||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 361 catctacctaatgagatggctcattatgctgctgactgttgggatgctgagatagagtgc 420 Query: 645 tcttatggatggatagagtgtgtgggcattgcagatagatctgcatatgatttaaaagct 704 || ||||| ||||||||||||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 421 tcgtatgggtggatagagtgtgtgggtattgctgatagatctgcatatgatttgaaagct 480 Query: 705 ca 706 || Sbjct: 481 ca 482
>gb|AY107118.1| Zea mays PCO066365 mRNA sequence Length = 1383 Score = 420 bits (212), Expect = e-114 Identities = 329/368 (89%) Strand = Plus / Plus Query: 339 gagattgagcactttgtagatcctgaggataagtcacatcccaagtttgttgatgttgct 398 ||||||||||| ||||| || || ||||| || |||||||| || ||||||||||||||| Sbjct: 9 gagattgagcattttgtggacccagaggacaaatcacatccaaaatttgttgatgttgct 68 Query: 399 gatttggagtttttgatgtttccgagagagctgcaactctcaggggagtcggccaagtta 458 ||||||||||| |||||||||| |||||||| ||||||||||||||||||||||| || Sbjct: 69 gatttggagttcctgatgtttccaagagagctacaactctcaggggagtcggccaaacta 128 Query: 459 acgaagcttgcggaagcagtttcgaagggaactgttaataatgagacacttggttacttt 518 |||||| | |||||||||| | ||||||||||||||||| ||||||||||||||||| Sbjct: 129 ttgaagctcggggaagcagttgcaaagggaactgttaataacgagacacttggttacttc 188 Query: 519 attggaagggtctatcttttcctgacacgtttgggaattgataagtgccgattgcgcttc 578 ||||||||||||||||||||||||||| | ||||||||||||||| | || ||||||||| Sbjct: 189 attggaagggtctatcttttcctgacatgcttgggaattgataagggtcggttgcgcttc 248 Query: 579 agacagcatctacctaatgagatggctcattatgccgctgactgctgggatgcggagatt 638 || |||||| ||||||||||||||||||||||||| ||||| || |||||||| ||||| Sbjct: 249 aggcagcatttacctaatgagatggctcattatgctgctgattgttgggatgctgagata 308 Query: 639 gagtgttcttatggatggatagagtgtgtgggcattgcagatagatctgcatatgattta 698 ||||| |||||||| ||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 309 gagtgctcttatgggtggatagagtgtgtgggtattgctgatagatctgcatatgatttg 368 Query: 699 aaagctca 706 |||||||| Sbjct: 369 aaagctca 376
>dbj|AK068997.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169I18, full insert sequence Length = 1328 Score = 383 bits (193), Expect = e-103 Identities = 286/317 (90%) Strand = Plus / Plus Query: 394 ttgctgatttggagtttttgatgtttccgagagagctgcaactctcaggggagtcggcca 453 |||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||| Sbjct: 1 ttgctgatttggagtttttgatgtttccaagagagctgcaactttcaggggagtcagcca 60 Query: 454 agttaacgaagcttgcggaagcagtttcgaagggaactgttaataatgagacacttggtt 513 ||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 61 agttagtgaagcttggggaagcagtttcaaagggaactgttaataatgagacacttggtt 120 Query: 514 actttattggaagggtctatcttttcctgacacgtttgggaattgataagtgccgattgc 573 |||| ||||| ||||||||||||||||| ||||||||||| |||||||| ||| | | Sbjct: 121 acttcattgggagggtctatcttttcctaacacgtttgggtattgataaaaaccggctac 180 Query: 574 gcttcagacagcatctacctaatgagatggctcattatgccgctgactgctgggatgcgg 633 ||||||| ||||||||||||||||||||||| |||||||| |||||||| |||||||| | Sbjct: 181 gcttcaggcagcatctacctaatgagatggcccattatgctgctgactgttgggatgcag 240 Query: 634 agattgagtgttcttatggatggatagagtgtgtgggcattgcagatagatctgcatatg 693 |||||||||| ||||| ||||||||||| |||||||||||||| || |||||||| |||| Sbjct: 241 agattgagtgctcttacggatggatagaatgtgtgggcattgctgacagatctgcgtatg 300 Query: 694 atttaaaagctcattct 710 |||| |||||||||| Sbjct: 301 atttgcgagctcattct 317
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 260 bits (131), Expect = 6e-66 Identities = 203/227 (89%) Strand = Plus / Plus Query: 484 agggaactgttaataatgagacacttggttactttattggaagggtctatcttttcctga 543 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 26895316 agggaactgttaataatgagacacttggttacttcattgggagggtctatcttttcctaa 26895375 Query: 544 cacgtttgggaattgataagtgccgattgcgcttcagacagcatctacctaatgagatgg 603 |||||||||| |||||||| ||| | |||||||| |||||||||||||||||||||| Sbjct: 26895376 cacgtttgggtattgataaaaaccggctacgcttcaggcagcatctacctaatgagatgg 26895435 Query: 604 ctcattatgccgctgactgctgggatgcggagattgagtgttcttatggatggatagagt 663 | |||||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||| | Sbjct: 26895436 cccattatgctgctgactgttgggatgcagagattgagtgctcttacggatggatagaat 26895495 Query: 664 gtgtgggcattgcagatagatctgcatatgatttaaaagctcattct 710 ||||||||||||| || |||||||| |||||||| |||||||||| Sbjct: 26895496 gtgtgggcattgctgacagatctgcgtatgatttgcgagctcattct 26895542 Score = 250 bits (126), Expect = 5e-63 Identities = 180/198 (90%) Strand = Plus / Plus Query: 289 agatctctccgcgtcaaggtcttctacgagtgcgtgaattcacattggccgagattgagc 348 |||| ||||| || |||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 26894996 agatttctccacgacaaggtcttctacgtgtgcgtgaattcacattagccgagattgagc 26895055 Query: 349 actttgtagatcctgaggataagtcacatcccaagtttgttgatgttgctgatttggagt 408 ||||||| |||||||||||||| || || || || ||||||||||||||||||||||||| Sbjct: 26895056 actttgtggatcctgaggataaatctcacccaaaatttgttgatgttgctgatttggagt 26895115 Query: 409 ttttgatgtttccgagagagctgcaactctcaggggagtcggccaagttaacgaagcttg 468 ||||||||||||| |||||||||||||| ||||||||||| ||||||||| |||||||| Sbjct: 26895116 ttttgatgtttccaagagagctgcaactttcaggggagtcagccaagttagtgaagcttg 26895175 Query: 469 cggaagcagtttcgaagg 486 |||||||||||| |||| Sbjct: 26895176 gggaagcagtttcaaagg 26895193 Score = 135 bits (68), Expect = 2e-28 Identities = 120/136 (88%), Gaps = 1/136 (0%) Strand = Plus / Plus Query: 31 gatgacctctcaccaga-gaactcggtgcaaagatcaaggaatatggcattgttgcccct 89 |||||||| ||| |||| ||||| || |||||||| ||||||||||| |||||||||||| Sbjct: 26894445 gatgacctttcagcagatgaacttggcgcaaagattaaggaatatgggattgttgcccct 26894504 Query: 90 gatacaaagaacccactctctgctccctatccattcaatcttatgttccagacatcaatt 149 ||||| |||||||| ||||||| |||||| || ||||||||||||||||||||||| || Sbjct: 26894505 gatactaagaacccgctctctgatccctacccgttcaatcttatgttccagacatccatc 26894564 Query: 150 ggcccaacaggtctta 165 ||||| || ||||||| Sbjct: 26894565 ggccctaccggtctta 26894580 Score = 129 bits (65), Expect = 1e-26 Identities = 101/113 (89%) Strand = Plus / Plus Query: 174 tatatgaggccagagactgcacagggtatttttgtcaacttcaaggacttgtactactac 233 |||||||| ||||| || |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 26894698 tatatgagaccagaaacagcacagggtatttttgtcaacttcaaggacttgtactattac 26894757 Query: 234 aatggccaaaaacttccctttgcagcagctcaaattggtcaagcattccgtaa 286 || || ||||| || || || |||||||||||||| || |||||||||||||| Sbjct: 26894758 aacgggcaaaagctccctttcgcagcagctcaaatcgggcaagcattccgtaa 26894810
>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665C04 Length = 177054 Score = 260 bits (131), Expect = 6e-66 Identities = 203/227 (89%) Strand = Plus / Plus Query: 484 agggaactgttaataatgagacacttggttactttattggaagggtctatcttttcctga 543 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 158106 agggaactgttaataatgagacacttggttacttcattgggagggtctatcttttcctaa 158165 Query: 544 cacgtttgggaattgataagtgccgattgcgcttcagacagcatctacctaatgagatgg 603 |||||||||| |||||||| ||| | |||||||| |||||||||||||||||||||| Sbjct: 158166 cacgtttgggtattgataaaaaccggctacgcttcaggcagcatctacctaatgagatgg 158225 Query: 604 ctcattatgccgctgactgctgggatgcggagattgagtgttcttatggatggatagagt 663 | |||||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||| | Sbjct: 158226 cccattatgctgctgactgttgggatgcagagattgagtgctcttacggatggatagaat 158285 Query: 664 gtgtgggcattgcagatagatctgcatatgatttaaaagctcattct 710 ||||||||||||| || |||||||| |||||||| |||||||||| Sbjct: 158286 gtgtgggcattgctgacagatctgcgtatgatttgcgagctcattct 158332 Score = 250 bits (126), Expect = 5e-63 Identities = 180/198 (90%) Strand = Plus / Plus Query: 289 agatctctccgcgtcaaggtcttctacgagtgcgtgaattcacattggccgagattgagc 348 |||| ||||| || |||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 157786 agatttctccacgacaaggtcttctacgtgtgcgtgaattcacattagccgagattgagc 157845 Query: 349 actttgtagatcctgaggataagtcacatcccaagtttgttgatgttgctgatttggagt 408 ||||||| |||||||||||||| || || || || ||||||||||||||||||||||||| Sbjct: 157846 actttgtggatcctgaggataaatctcacccaaaatttgttgatgttgctgatttggagt 157905 Query: 409 ttttgatgtttccgagagagctgcaactctcaggggagtcggccaagttaacgaagcttg 468 ||||||||||||| |||||||||||||| ||||||||||| ||||||||| |||||||| Sbjct: 157906 ttttgatgtttccaagagagctgcaactttcaggggagtcagccaagttagtgaagcttg 157965 Query: 469 cggaagcagtttcgaagg 486 |||||||||||| |||| Sbjct: 157966 gggaagcagtttcaaagg 157983 Score = 135 bits (68), Expect = 2e-28 Identities = 120/136 (88%), Gaps = 1/136 (0%) Strand = Plus / Plus Query: 31 gatgacctctcaccaga-gaactcggtgcaaagatcaaggaatatggcattgttgcccct 89 |||||||| ||| |||| ||||| || |||||||| ||||||||||| |||||||||||| Sbjct: 157235 gatgacctttcagcagatgaacttggcgcaaagattaaggaatatgggattgttgcccct 157294 Query: 90 gatacaaagaacccactctctgctccctatccattcaatcttatgttccagacatcaatt 149 ||||| |||||||| ||||||| |||||| || ||||||||||||||||||||||| || Sbjct: 157295 gatactaagaacccgctctctgatccctacccgttcaatcttatgttccagacatccatc 157354 Query: 150 ggcccaacaggtctta 165 ||||| || ||||||| Sbjct: 157355 ggccctaccggtctta 157370 Score = 129 bits (65), Expect = 1e-26 Identities = 101/113 (89%) Strand = Plus / Plus Query: 174 tatatgaggccagagactgcacagggtatttttgtcaacttcaaggacttgtactactac 233 |||||||| ||||| || |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 157488 tatatgagaccagaaacagcacagggtatttttgtcaacttcaaggacttgtactattac 157547 Query: 234 aatggccaaaaacttccctttgcagcagctcaaattggtcaagcattccgtaa 286 || || ||||| || || || |||||||||||||| || |||||||||||||| Sbjct: 157548 aacgggcaaaagctccctttcgcagcagctcaaatcgggcaagcattccgtaa 157600
>ref|NM_102728.2| Arabidopsis thaliana ATP binding / glycine-tRNA ligase/ tRNA ligase AT1G29880 mRNA, complete cds Length = 2394 Score = 161 bits (81), Expect = 4e-36 Identities = 168/197 (85%) Strand = Plus / Plus Query: 189 actgcacagggtatttttgtcaacttcaaggacttgtactactacaatggccaaaaactt 248 ||||| || ||||||||||||||||| |||||||||||||| |||||||| | |||||| Sbjct: 909 actgctcaaggtatttttgtcaactttaaggacttgtactattacaatgggaagaaactt 968 Query: 249 ccctttgcagcagctcaaattggtcaagcattccgtaacgagatctctccgcgtcaaggt 308 || ||||| || ||||||||||||||||| || | || ||||| ||||| || ||||| Sbjct: 969 ccttttgccgcggctcaaattggtcaagcctttagaaatgagatatctcctcgacaaggg 1028 Query: 309 cttctacgagtgcgtgaattcacattggccgagattgagcactttgtagatcctgaggat 368 ||||| |||| ||||||||||| |||| |||||||||||||| || ||||||||| || Sbjct: 1029 cttcttagagttcgtgaattcacgctggcagagattgagcacttcgttgatcctgagaat 1088 Query: 369 aagtcacatcccaagtt 385 ||||||||||| ||||| Sbjct: 1089 aagtcacatcctaagtt 1105 Score = 60.0 bits (30), Expect = 1e-05 Identities = 96/118 (81%) Strand = Plus / Plus Query: 571 tgcgcttcagacagcatctacctaatgagatggctcattatgccgctgactgctgggatg 630 |||||||| | ||||||||| | ||||| ||||| || ||||| || || || ||||||| Sbjct: 1291 tgcgcttccgtcagcatctagcaaatgaaatggcccactatgcagcagattgttgggatg 1350 Query: 631 cggagattgagtgttcttatggatggatagagtgtgtgggcattgcagatagatctgc 688 | || ||||| |||| ||||| ||||| || ||||| || ||||||||||| ||||| Sbjct: 1351 ctgaaattgaaagttcatatgggtggattgaatgtgttgggattgcagataggtctgc 1408
>gb|AY050895.1| Arabidopsis thaliana putative glycyl tRNA synthetase (At1g29880) mRNA, complete cds Length = 2383 Score = 161 bits (81), Expect = 4e-36 Identities = 168/197 (85%) Strand = Plus / Plus Query: 189 actgcacagggtatttttgtcaacttcaaggacttgtactactacaatggccaaaaactt 248 ||||| || ||||||||||||||||| |||||||||||||| |||||||| | |||||| Sbjct: 908 actgctcaaggtatttttgtcaactttaaggacttgtactattacaatgggaagaaactt 967 Query: 249 ccctttgcagcagctcaaattggtcaagcattccgtaacgagatctctccgcgtcaaggt 308 || ||||| || ||||||||||||||||| || | || ||||| ||||| || ||||| Sbjct: 968 ccttttgccgcggctcaaattggtcaagcctttagaaatgagatatctcctcgacaaggg 1027 Query: 309 cttctacgagtgcgtgaattcacattggccgagattgagcactttgtagatcctgaggat 368 ||||| |||| ||||||||||| |||| |||||||||||||| || ||||||||| || Sbjct: 1028 cttcttagagttcgtgaattcacgctggcagagattgagcacttcgttgatcctgagaat 1087 Query: 369 aagtcacatcccaagtt 385 ||||||||||| ||||| Sbjct: 1088 aagtcacatcctaagtt 1104 Score = 60.0 bits (30), Expect = 1e-05 Identities = 96/118 (81%) Strand = Plus / Plus Query: 571 tgcgcttcagacagcatctacctaatgagatggctcattatgccgctgactgctgggatg 630 |||||||| | ||||||||| | ||||| ||||| || ||||| || || || ||||||| Sbjct: 1290 tgcgcttccgtcagcatctagcaaatgaaatggcccactatgcagcagattgttgggatg 1349 Query: 631 cggagattgagtgttcttatggatggatagagtgtgtgggcattgcagatagatctgc 688 | || ||||| |||| ||||| ||||| || ||||| || ||||||||||| ||||| Sbjct: 1350 ctgaaattgaaagttcatatgggtggattgaatgtgttgggattgcagataggtctgc 1407
>emb|AJ002062.1|ATGTRNAS Arabidopsis thaliana mRNA for glycyl-tRNA synthetase Length = 2190 Score = 161 bits (81), Expect = 4e-36 Identities = 168/197 (85%) Strand = Plus / Plus Query: 189 actgcacagggtatttttgtcaacttcaaggacttgtactactacaatggccaaaaactt 248 ||||| || ||||||||||||||||| |||||||||||||| |||||||| | |||||| Sbjct: 889 actgctcaaggtatttttgtcaactttaaggacttgtactattacaatgggaagaaactt 948 Query: 249 ccctttgcagcagctcaaattggtcaagcattccgtaacgagatctctccgcgtcaaggt 308 || ||||| || ||||||||||||||||| || | || ||||| ||||| || ||||| Sbjct: 949 ccttttgccgcggctcaaattggtcaagcctttagaaatgagatatctcctcgacaaggg 1008 Query: 309 cttctacgagtgcgtgaattcacattggccgagattgagcactttgtagatcctgaggat 368 ||||| |||| ||||||||||| |||| |||||||||||||| || ||||||||| || Sbjct: 1009 cttcttagagttcgtgaattcacgctggcagagattgagcacttcgttgatcctgagaat 1068 Query: 369 aagtcacatcccaagtt 385 ||||||||||| ||||| Sbjct: 1069 aagtcacatcctaagtt 1085 Score = 60.0 bits (30), Expect = 1e-05 Identities = 96/118 (81%) Strand = Plus / Plus Query: 571 tgcgcttcagacagcatctacctaatgagatggctcattatgccgctgactgctgggatg 630 |||||||| | ||||||||| | ||||| ||||| || ||||| || || || ||||||| Sbjct: 1271 tgcgcttccgtcagcatctagcaaatgaaatggcccactatgcagcagattgttgggatg 1330 Query: 631 cggagattgagtgttcttatggatggatagagtgtgtgggcattgcagatagatctgc 688 | || ||||| |||| ||||| ||||| || ||||| || ||||||||||| ||||| Sbjct: 1331 ctgaaattgaaagttcatatgggtggattgaatgtgttgggattgcagataggtctgc 1388
>emb|BX815479.1|CNS0AATJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS65ZA08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2327 Score = 161 bits (81), Expect = 4e-36 Identities = 168/197 (85%) Strand = Plus / Plus Query: 189 actgcacagggtatttttgtcaacttcaaggacttgtactactacaatggccaaaaactt 248 ||||| || ||||||||||||||||| |||||||||||||| |||||||| | |||||| Sbjct: 903 actgctcaaggtatttttgtcaactttaaggacttgtactattacaatgggaagaaactt 962 Query: 249 ccctttgcagcagctcaaattggtcaagcattccgtaacgagatctctccgcgtcaaggt 308 || ||||| || ||||||||||||||||| || | || ||||| ||||| || ||||| Sbjct: 963 ccttttgccgcggctcaaattggtcaagcctttagaaatgagatatctcctcgacaaggg 1022 Query: 309 cttctacgagtgcgtgaattcacattggccgagattgagcactttgtagatcctgaggat 368 ||||| |||| ||||||||||| |||| |||||||||||||| || ||||||||| || Sbjct: 1023 cttcttagagttcgtgaattcacgctggcagagattgagcacttcgttgatcctgagaat 1082 Query: 369 aagtcacatcccaagtt 385 ||||||||||| ||||| Sbjct: 1083 aagtcacatcctaagtt 1099 Score = 60.0 bits (30), Expect = 1e-05 Identities = 96/118 (81%) Strand = Plus / Plus Query: 571 tgcgcttcagacagcatctacctaatgagatggctcattatgccgctgactgctgggatg 630 |||||||| | ||||||||| | ||||| ||||| || ||||| || || || ||||||| Sbjct: 1285 tgcgcttccgtcagcatctagcaaatgaaatggcccactatgcagcagattgttgggatg 1344 Query: 631 cggagattgagtgttcttatggatggatagagtgtgtgggcattgcagatagatctgc 688 | || ||||| |||| ||||| ||||| || ||||| || ||||||||||| ||||| Sbjct: 1345 ctgaaattgaaagttcatatgggtggattgaatgtgttgggattgcagataggtctgc 1402
>gb|AY086930.1| Arabidopsis thaliana clone 29666 mRNA, complete sequence Length = 2357 Score = 161 bits (81), Expect = 4e-36 Identities = 168/197 (85%) Strand = Plus / Plus Query: 189 actgcacagggtatttttgtcaacttcaaggacttgtactactacaatggccaaaaactt 248 ||||| || ||||||||||||||||| |||||||||||||| |||||||| | |||||| Sbjct: 903 actgctcaaggtatttttgtcaactttaaggacttgtactattacaatgggaagaaactt 962 Query: 249 ccctttgcagcagctcaaattggtcaagcattccgtaacgagatctctccgcgtcaaggt 308 || ||||| || ||||||||||||||||| || | || ||||| ||||| || ||||| Sbjct: 963 ccttttgccgcggctcaaattggtcaagcctttagaaatgagatatctcctcgacaaggg 1022 Query: 309 cttctacgagtgcgtgaattcacattggccgagattgagcactttgtagatcctgaggat 368 ||||| |||| ||||||||||| |||| |||||||||||||| || ||||||||| || Sbjct: 1023 cttcttagagttcgtgaattcacgctggcagagattgagcacttcgttgatcctgagaat 1082 Query: 369 aagtcacatcccaagtt 385 ||||||||||| ||||| Sbjct: 1083 aagtcacatcctaagtt 1099 Score = 60.0 bits (30), Expect = 1e-05 Identities = 96/118 (81%) Strand = Plus / Plus Query: 571 tgcgcttcagacagcatctacctaatgagatggctcattatgccgctgactgctgggatg 630 |||||||| | ||||||||| | ||||| ||||| || ||||| || || || ||||||| Sbjct: 1285 tgcgcttccgtcagcatctagcaaatgaaatggcccactatgcagcagattgttgggatg 1344 Query: 631 cggagattgagtgttcttatggatggatagagtgtgtgggcattgcagatagatctgc 688 | || ||||| |||| ||||| ||||| || ||||| || ||||||||||| ||||| Sbjct: 1345 ctgaaattgaaagttcatatgggtggattgaatgtgttgggattgcagataggtctgc 1402
>ref|XM_472342.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2022 Score = 139 bits (70), Expect = 1e-29 Identities = 208/254 (81%) Strand = Plus / Plus Query: 174 tatatgaggccagagactgcacagggtatttttgtcaacttcaaggacttgtactactac 233 ||||||||||||||||| ||||| ||||| ||||| |||||||| |||||||| |||||| Sbjct: 688 tatatgaggccagagacagcacaaggtatctttgtaaacttcaaagacttgtattactac 747 Query: 234 aatggccaaaaacttccctttgcagcagctcaaattggtcaagcattccgtaacgagatc 293 || ||| | || || |||||||| ||||| || |||||||| || ||| | || ||||| Sbjct: 748 aacggcaacaagctaccctttgctgcagcacagattggtcaggccttcagaaatgagata 807 Query: 294 tctccgcgtcaaggtcttctacgagtgcgtgaattcacattggccgagattgagcacttt 353 ||||| || ||||| ||||| |||| || ||||| || || || ||||||||||||||| Sbjct: 808 tctcctcgccaaggacttctgagagtccgagaatttactttagcggagattgagcacttt 867 Query: 354 gtagatcctgaggataagtcacatcccaagtttgttgatgttgctgatttggagtttttg 413 || || || ||||| || || || || |||||| ||||||| ||||| |||| ||||| Sbjct: 868 gtggacccagaggacaaatcccacccaaagtttcgtgatgtttctgatctggaatttttt 927 Query: 414 atgtttccgagaga 427 |||||||| ||||| Sbjct: 928 atgtttccaagaga 941 Score = 127 bits (64), Expect = 5e-26 Identities = 175/212 (82%) Strand = Plus / Plus Query: 484 agggaactgttaataatgagacacttggttactttattggaagggtctatcttttcctga 543 |||| |||||||| |||||||| ||||| ||||||||||||||||||||||| ||| ||| Sbjct: 998 aggggactgttaacaatgagacccttggctactttattggaagggtctatctcttcttga 1057 Query: 544 cacgtttgggaattgataagtgccgattgcgcttcagacagcatctacctaatgagatgg 603 | | | |||||||| || || | || ||| ||||||| || || ||||| |||| Sbjct: 1058 cgcagcttggaattgacaaagatcgtctacggttccgacagcacctgccaaatgaaatgg 1117 Query: 604 ctcattatgccgctgactgctgggatgcggagattgagtgttcttatggatggatagagt 663 |||||||||| ||||| ||||||||||| |||||||| || |||| ||| ||||| |||| Sbjct: 1118 ctcattatgctgctgattgctgggatgcagagattgaatgctcttttgggtggattgagt 1177 Query: 664 gtgtgggcattgcagatagatctgcatatgat 695 |||| || ||||| ||||| |||||||||||| Sbjct: 1178 gtgttgggattgctgataggtctgcatatgat 1209 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Plus Query: 54 ggtgcaaagatcaaggaatatggcattgttgcccctgatacaaagaaccc 103 ||||| ||||||||||| |||||||||||||| || || || |||||||| Sbjct: 568 ggtgctaagatcaaggagtatggcattgttgctccagacaccaagaaccc 617
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 127 bits (64), Expect = 5e-26 Identities = 175/212 (82%) Strand = Plus / Plus Query: 484 agggaactgttaataatgagacacttggttactttattggaagggtctatcttttcctga 543 |||| |||||||| |||||||| ||||| ||||||||||||||||||||||| ||| ||| Sbjct: 19687910 aggggactgttaacaatgagacccttggctactttattggaagggtctatctcttcttga 19687969 Query: 544 cacgtttgggaattgataagtgccgattgcgcttcagacagcatctacctaatgagatgg 603 | | | |||||||| || || | || ||| ||||||| || || ||||| |||| Sbjct: 19687970 cgcagcttggaattgacaaagatcgtctacggttccgacagcacctgccaaatgaaatgg 19688029 Query: 604 ctcattatgccgctgactgctgggatgcggagattgagtgttcttatggatggatagagt 663 |||||||||| ||||| ||||||||||| |||||||| || |||| ||| ||||| |||| Sbjct: 19688030 ctcattatgctgctgattgctgggatgcagagattgaatgctcttttgggtggattgagt 19688089 Query: 664 gtgtgggcattgcagatagatctgcatatgat 695 |||| || ||||| ||||| |||||||||||| Sbjct: 19688090 gtgttgggattgctgataggtctgcatatgat 19688121 Score = 89.7 bits (45), Expect = 1e-14 Identities = 87/101 (86%) Strand = Plus / Plus Query: 174 tatatgaggccagagactgcacagggtatttttgtcaacttcaaggacttgtactactac 233 ||||||||||||||||| ||||| ||||| ||||| |||||||| |||||||| |||||| Sbjct: 19687283 tatatgaggccagagacagcacaaggtatctttgtaaacttcaaagacttgtattactac 19687342 Query: 234 aatggccaaaaacttccctttgcagcagctcaaattggtca 274 || ||| | || || |||||||| ||||| || |||||||| Sbjct: 19687343 aacggcaacaagctaccctttgctgcagcacagattggtca 19687383 Score = 61.9 bits (31), Expect = 3e-06 Identities = 112/139 (80%) Strand = Plus / Plus Query: 289 agatctctccgcgtcaaggtcttctacgagtgcgtgaattcacattggccgagattgagc 348 |||| ||||| || ||||| ||||| |||| || ||||| || || || |||||||||| Sbjct: 19687604 agatatctcctcgccaaggacttctgagagtccgagaatttactttagcggagattgagc 19687663 Query: 349 actttgtagatcctgaggataagtcacatcccaagtttgttgatgttgctgatttggagt 408 ||||||| || || ||||| || || || || |||||| ||||||| ||||| |||| | Sbjct: 19687664 actttgtggacccagaggacaaatcccacccaaagtttcgtgatgtttctgatctggaat 19687723 Query: 409 ttttgatgtttccgagaga 427 |||| |||||||| ||||| Sbjct: 19687724 tttttatgtttccaagaga 19687742 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Plus Query: 54 ggtgcaaagatcaaggaatatggcattgttgcccctgatacaaagaaccc 103 ||||| ||||||||||| |||||||||||||| || || || |||||||| Sbjct: 19687087 ggtgctaagatcaaggagtatggcattgttgctccagacaccaagaaccc 19687136
>dbj|AK059027.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B11, full insert sequence Length = 651 Score = 127 bits (64), Expect = 5e-26 Identities = 175/212 (82%) Strand = Plus / Plus Query: 484 agggaactgttaataatgagacacttggttactttattggaagggtctatcttttcctga 543 |||| |||||||| |||||||| ||||| ||||||||||||||||||||||| ||| ||| Sbjct: 171 aggggactgttaacaatgagacccttggctactttattggaagggtctatctcttcttga 230 Query: 544 cacgtttgggaattgataagtgccgattgcgcttcagacagcatctacctaatgagatgg 603 | | | |||||||| || || | || ||| ||||||| || || ||||| |||| Sbjct: 231 cgcagcttggaattgacaaagatcgtctacggttccgacagcacctgccaaatgaaatgg 290 Query: 604 ctcattatgccgctgactgctgggatgcggagattgagtgttcttatggatggatagagt 663 |||||||||| ||||| ||||||||||| |||||||| || |||| ||| ||||| |||| Sbjct: 291 ctcattatgctgctgattgctgggatgcagagattgaatgctcttttgggtggattgagt 350 Query: 664 gtgtgggcattgcagatagatctgcatatgat 695 |||| || ||||| ||||| |||||||||||| Sbjct: 351 gtgttgggattgctgataggtctgcatatgat 382 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 339 gagattgagcactttgtagatcctgaggataagtcacatcccaagtttgttgatgttgct 398 ||||||||||||||||| || || ||||| || || || || |||||| ||||||| || Sbjct: 26 gagattgagcactttgtggacccagaggacaaatcccacccaaagtttcgtgatgtttct 85 Query: 399 gatttggagtttttgatgtttccgagaga 427 ||| |||| ||||| |||||||| ||||| Sbjct: 86 gatctggaattttttatgtttccaagaga 114
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 127 bits (64), Expect = 5e-26 Identities = 175/212 (82%) Strand = Plus / Plus Query: 484 agggaactgttaataatgagacacttggttactttattggaagggtctatcttttcctga 543 |||| |||||||| |||||||| ||||| ||||||||||||||||||||||| ||| ||| Sbjct: 138636 aggggactgttaacaatgagacccttggctactttattggaagggtctatctcttcttga 138695 Query: 544 cacgtttgggaattgataagtgccgattgcgcttcagacagcatctacctaatgagatgg 603 | | | |||||||| || || | || ||| ||||||| || || ||||| |||| Sbjct: 138696 cgcagcttggaattgacaaagatcgtctacggttccgacagcacctgccaaatgaaatgg 138755 Query: 604 ctcattatgccgctgactgctgggatgcggagattgagtgttcttatggatggatagagt 663 |||||||||| ||||| ||||||||||| |||||||| || |||| ||| ||||| |||| Sbjct: 138756 ctcattatgctgctgattgctgggatgcagagattgaatgctcttttgggtggattgagt 138815 Query: 664 gtgtgggcattgcagatagatctgcatatgat 695 |||| || ||||| ||||| |||||||||||| Sbjct: 138816 gtgttgggattgctgataggtctgcatatgat 138847 Score = 89.7 bits (45), Expect = 1e-14 Identities = 87/101 (86%) Strand = Plus / Plus Query: 174 tatatgaggccagagactgcacagggtatttttgtcaacttcaaggacttgtactactac 233 ||||||||||||||||| ||||| ||||| ||||| |||||||| |||||||| |||||| Sbjct: 138009 tatatgaggccagagacagcacaaggtatctttgtaaacttcaaagacttgtattactac 138068 Query: 234 aatggccaaaaacttccctttgcagcagctcaaattggtca 274 || ||| | || || |||||||| ||||| || |||||||| Sbjct: 138069 aacggcaacaagctaccctttgctgcagcacagattggtca 138109 Score = 61.9 bits (31), Expect = 3e-06 Identities = 112/139 (80%) Strand = Plus / Plus Query: 289 agatctctccgcgtcaaggtcttctacgagtgcgtgaattcacattggccgagattgagc 348 |||| ||||| || ||||| ||||| |||| || ||||| || || || |||||||||| Sbjct: 138330 agatatctcctcgccaaggacttctgagagtccgagaatttactttagcggagattgagc 138389 Query: 349 actttgtagatcctgaggataagtcacatcccaagtttgttgatgttgctgatttggagt 408 ||||||| || || ||||| || || || || |||||| ||||||| ||||| |||| | Sbjct: 138390 actttgtggacccagaggacaaatcccacccaaagtttcgtgatgtttctgatctggaat 138449 Query: 409 ttttgatgtttccgagaga 427 |||| |||||||| ||||| Sbjct: 138450 tttttatgtttccaagaga 138468 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Plus Query: 54 ggtgcaaagatcaaggaatatggcattgttgcccctgatacaaagaaccc 103 ||||| ||||||||||| |||||||||||||| || || || |||||||| Sbjct: 137813 ggtgctaagatcaaggagtatggcattgttgctccagacaccaagaaccc 137862
>gb|AC008030.4|AC008030 Arabidopsis thaliana chromosome I BAC F1N18 genomic sequence, complete sequence Length = 101075 Score = 97.6 bits (49), Expect = 5e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 189 actgcacagggtatttttgtcaacttcaaggacttgtactactacaatggccaaaaactt 248 ||||| || ||||||||||||||||| |||||||||||||| |||||||| | |||||| Sbjct: 33424 actgctcaaggtatttttgtcaactttaaggacttgtactattacaatgggaagaaactt 33483 Query: 249 ccctttgcagcagctcaaattggtcaagc 277 || ||||| || ||||||||||||||||| Sbjct: 33484 ccttttgccgcggctcaaattggtcaagc 33512 Score = 81.8 bits (41), Expect = 3e-12 Identities = 83/97 (85%) Strand = Plus / Plus Query: 289 agatctctccgcgtcaaggtcttctacgagtgcgtgaattcacattggccgagattgagc 348 |||| ||||| || ||||| ||||| |||| ||||||||||| |||| |||||||||| Sbjct: 33632 agatatctcctcgacaagggcttcttagagttcgtgaattcacgctggcagagattgagc 33691 Query: 349 actttgtagatcctgaggataagtcacatcccaagtt 385 |||| || ||||||||| ||||||||||||| ||||| Sbjct: 33692 acttcgttgatcctgagaataagtcacatcctaagtt 33728 Score = 60.0 bits (30), Expect = 1e-05 Identities = 96/118 (81%) Strand = Plus / Plus Query: 571 tgcgcttcagacagcatctacctaatgagatggctcattatgccgctgactgctgggatg 630 |||||||| | ||||||||| | ||||| ||||| || ||||| || || || ||||||| Sbjct: 34018 tgcgcttccgtcagcatctagcaaatgaaatggcccactatgcagcagattgttgggatg 34077 Query: 631 cggagattgagtgttcttatggatggatagagtgtgtgggcattgcagatagatctgc 688 | || ||||| |||| ||||| ||||| || ||||| || ||||||||||| ||||| Sbjct: 34078 ctgaaattgaaagttcatatgggtggattgaatgtgttgggattgcagataggtctgc 34135 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 624 tgggatgcggagattgagtgttcttatggatggatagagtgtgtgggcattgcagataga 683 |||||||| || ||||||||||| ||||| ||||| || ||||| || ||||||||||| Sbjct: 37684 tgggatgctgaaattgagtgttcatatggttggattgaatgtgttggaattgcagatagg 37743 Query: 684 tctg 687 |||| Sbjct: 37744 tctg 37747 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Plus Query: 321 cgtgaattcacattggccgagattgagcactttgtagatcctgaggataagtcacat 377 ||||||||||| |||| || |||||||||||||| | |||||| ||||||||||| Sbjct: 37291 cgtgaattcactctggcagaaattgagcactttgttcaccctgagcataagtcacat 37347
>gb|AY105462.1| Zea mays PCO098051 mRNA sequence Length = 1406 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgcggagattgagtgttcttatgga 653 ||||| |||||||||||||| ||||| || |||||||| |||||||| || || ||||| Sbjct: 257 aatgaaatggctcattatgctgctgattgttgggatgcagagattgaatgctcctatggt 316 Query: 654 tggatagagtgtgtgggcattgcagatagatctgcatatga 694 ||||| |||||||| || ||||| ||||| ||||| ||||| Sbjct: 317 tggattgagtgtgttggaattgctgataggtctgcctatga 357 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 484 agggaactgttaataatgagacacttggttactttattggaagggtctatcttttcctga 543 |||||||||| || |||||||| ||||| ||||| |||||||||||||| |||||| ||| Sbjct: 147 agggaactgtgaacaatgagacccttggctacttcattggaagggtctaccttttcttga 206 Query: 544 cac 546 ||| Sbjct: 207 cac 209 Score = 63.9 bits (32), Expect = 7e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 345 gagcactttgtagatcctgaggataagtcacatcccaagtttgttgatgttgctgatttg 404 ||||||||||| || || ||||| || || ||||| ||||||| ||||||| ||||| | Sbjct: 8 gagcactttgtggacccagaggacaaatcccatccaaagtttggtgatgtttctgatcta 67 Query: 405 gagtttttgatgtttccgagagag 428 ||||| | |||||||||||||||| Sbjct: 68 gagttctggatgtttccgagagag 91
>emb|BX824296.1|CNS0A6ST Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH37ZD08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1468 Score = 79.8 bits (40), Expect = 1e-11 Identities = 134/164 (81%), Gaps = 1/164 (0%) Strand = Plus / Plus Query: 216 aaggacttgtactactacaatggccaaaaacttccctttgcagcagctcaaattggtcaa 275 ||||||||||| ||||||||||| ||| |||||||||| || ||||||||||||||| Sbjct: 559 aaggacttgtattactacaatgggaggaaatttccctttgctgctgctcaaattggtcaa 618 Query: 276 gcattccgtaacgagatctctccgcgtcaaggtcttctacgagtgcgtgaattcacattg 335 | || | || ||||| |||| |||||||| ||||| |||| |||||||||| || Sbjct: 619 ccttta-gaaatgagatatctcatcgtcaagggcttcttagagtttgtgaattcacgctg 677 Query: 336 gccgagattgagcactttgtagatcctgaggataagtcacatcc 379 || || |||||||| ||||| ||||||| | ||||||||||||| Sbjct: 678 gcagaaattgagcattttgttgatcctgggaataagtcacatcc 721
>gb|AF466646.1| Zea mays putative transposase (Z195D10.1) gene, partial cds; glycyl-tRNA synthetase (Z195D10.2), ornithine carbamoyltransferase (Z195D10.3), putative gag protein (Z195D10.5), putative SET-domain transcriptional regulator (Z195D10.7), putative oxysterol-binding protein (Z195D10.8), putative polyprotein (Z195D10.9), putative oxysterol-binding protein (Z195D10.10), putative gag-pol polyprotein (Z195D10.11), putative phosphatidylinositol-4-phosphate-5-kinase (Z195D10.12), hypothetical protein (Z195D10.15), putative gag-pol polyprotein (Z195D10.16), putative polyprotein (Z195D10.17), putative retrotransposon protein (Z195D10.18), and prpol (Z195D10.19) genes, complete cds; and putative teosinte branched2 (Z195D10.20) gene, partial cds Length = 141939 Score = 61.9 bits (31), Expect = 3e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 300 cgtcaaggtcttctacgagtgcgtgaattcacattggccgagattgagcactttgtagat 359 |||||||||||||| |||||| |||||||||||||| ||||||| ||| || || || Sbjct: 5766 cgtcaaggtcttctccgagtgagtgaattcacattgatagagattgggcatttcgtggac 5825 Query: 360 cctgaggataagtcacatcccaagtttgttgatgt 394 | ||||| || |||||||| || ||||||||||| Sbjct: 5826 ctagaggacaaatcacatccaaaatttgttgatgt 5860
>ref|NM_001031510.1| Gallus gallus glycyl-tRNA synthetase (GARS), mRNA Length = 2402 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||||||||||||| ||||||||||||||| Sbjct: 1273 aatgagatggctcattatgcctgtgactgctgggatgc 1310
>ref|XM_387134.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG06958.1) partial mRNA Length = 1992 Score = 60.0 bits (30), Expect = 1e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 281 ccgtaacgagatctctccgcgtcaaggtcttctacgagtgcgtgaattcacattggccga 340 |||||||||||||||||| ||| |||||||| ||||| ||||| ||| |||| || Sbjct: 753 ccgtaacgagatctctcctcgtgccggtcttctgcgagtccgtgagttcctcatggctga 812 Query: 341 gattgagcactttgtagatcctgagg 366 ||| ||||||||||| |||||||||| Sbjct: 813 gatcgagcactttgtcgatcctgagg 838
>emb|AJ721070.1| Gallus gallus mRNA for hypothetical protein, clone 34b10 Length = 2402 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||||||||||||| ||||||||||||||| Sbjct: 1273 aatgagatggctcattatgcctgtgactgctgggatgc 1310
>emb|CR524115.1| Gallus gallus finished cDNA, clone ChEST335a23 Length = 2202 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||||||||||||| ||||||||||||||| Sbjct: 1200 aatgagatggctcattatgcctgtgactgctgggatgc 1237
>gb|AC092081.3| Gallus gallus clone WAG-77D19, complete sequence Length = 144092 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||||||||||||| ||||||||||||||| Sbjct: 14352 aatgagatggctcattatgcctgtgactgctgggatgc 14389
>gb|AC092403.4| Gallus gallus clone WAG-100N11, complete sequence Length = 144369 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||||||||||||| ||||||||||||||| Sbjct: 123223 aatgagatggctcattatgcctgtgactgctgggatgc 123260
>dbj|AB190350.1| Mangifera indica DNA, microsatellite locus MIAC-11 Length = 221 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 303 caaggtcttctacgagtgcgtgaattcacattggccgagattgagcactttgtagatcct 362 ||||||||| | |||| |||||||| ||| | || ||||||||||||||||| |||||| Sbjct: 102 caaggtcttttgagagttcgtgaatttacactagcagagattgagcactttgttgatcct 43 Query: 363 gagga 367 ||||| Sbjct: 42 gagga 38
>ref|NM_102727.2| Arabidopsis thaliana ATP binding / glycine-tRNA ligase/ tRNA ligase AT1G29870 mRNA, complete cds Length = 1392 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 624 tgggatgcggagattgagtgttcttatggatggatagagtgtgtgggcattgcagataga 683 |||||||| || ||||||||||| ||||| ||||| || ||||| || ||||||||||| Sbjct: 1156 tgggatgctgaaattgagtgttcatatggttggattgaatgtgttggaattgcagatagg 1215 Query: 684 tctg 687 |||| Sbjct: 1216 tctg 1219 Score = 52.0 bits (26), Expect = 0.003 Identities = 74/90 (82%) Strand = Plus / Plus Query: 288 gagatctctccgcgtcaaggtcttctacgagtgcgtgaattcacattggccgagattgag 347 ||||| ||||| |||||||| ||||| || ||||||||||| |||| || |||||| Sbjct: 817 gagatatctccacgtcaagggcttcttagaactcgtgaattcactctggcagaaattgag 876 Query: 348 cactttgtagatcctgaggataagtcacat 377 |||||||| | |||||| ||||||||||| Sbjct: 877 cactttgttcaccctgagcataagtcacat 906
>ref|NM_114343.1| Arabidopsis thaliana ATP binding / tRNA ligase AT3G44740 mRNA, complete cds Length = 831 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 300 cgtcaaggtcttctacgagtgcgtgaattcacattggccgagattgagcactttgtagat 359 |||||||| ||||| |||| |||||||||| |||| || |||||||| ||||| ||| Sbjct: 331 cgtcaagggcttcttagagtttgtgaattcacgctggcagaaattgagcattttgttgat 390 Query: 360 cctgaggataagtcacatcc 379 |||| | ||||||||||||| Sbjct: 391 cctgggaataagtcacatcc 410 Score = 52.0 bits (26), Expect = 0.003 Identities = 50/58 (86%) Strand = Plus / Plus Query: 218 ggacttgtactactacaatggccaaaaacttccctttgcagcagctcaaattggtcaa 275 ||||||||| ||||||||||| ||| |||||||||| || ||||||||||||||| Sbjct: 231 ggacttgtattactacaatgggaggaaatttccctttgctgctgctcaaattggtcaa 288
>gb|AC002534.1| Arabidopsis thaliana BAC T32N15 from chromosome III near 54 cM, complete sequence Length = 101371 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 300 cgtcaaggtcttctacgagtgcgtgaattcacattggccgagattgagcactttgtagat 359 |||||||| ||||| |||| |||||||||| |||| || |||||||| ||||| ||| Sbjct: 63356 cgtcaagggcttcttagagtttgtgaattcacgctggcagaaattgagcattttgttgat 63415 Query: 360 cctgaggataagtcacatcc 379 |||| | ||||||||||||| Sbjct: 63416 cctgggaataagtcacatcc 63435 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 216 aaggacttgtactactacaatggccaaaaacttccctttgcagcagctcaaattggtcaa 275 ||||||||||| ||||||||||| ||| |||||||||| || ||||||||||||||| Sbjct: 63152 aaggacttgtattactacaatgggaggaaatttccctttgctgctgctcaaattggtcaa 63211
>dbj|AK061199.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-A04, full insert sequence Length = 1055 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 628 atgcggagattgagtgttcttatggatggatagagtgtgtgggcattgcagatagatctg 687 |||| |||||||| || |||| ||| ||||| |||||||| || ||||| ||||| |||| Sbjct: 1 atgcagagattgaatgctcttttgggtggattgagtgtgttgggattgctgataggtctg 60 Query: 688 catatgat 695 |||||||| Sbjct: 61 catatgat 68
>ref|XM_519025.1| PREDICTED: Pan troglodytes glycyl-tRNA synthetase (LOC463329), mRNA Length = 2175 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 324 gaattcacattggccgagattgagcactttgtagatcc 361 ||||||||| |||| || |||||||||||||||||||| Sbjct: 1231 gaattcacaatggcagaaattgagcactttgtagatcc 1268
>ref|NM_002047.1| Homo sapiens glycyl-tRNA synthetase (GARS), mRNA Length = 2742 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 324 gaattcacattggccgagattgagcactttgtagatcc 361 ||||||||| |||| || |||||||||||||||||||| Sbjct: 1389 gaattcacaatggcagaaattgagcactttgtagatcc 1426 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||| ||||||||| |||||| |||||||| Sbjct: 1659 aatgagatggcccattatgcctgtgactgttgggatgc 1696
>ref|XM_754216.1| Ustilago maydis 521 hypothetical protein (UM03162.1) partial mRNA Length = 2046 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Plus Query: 318 gtgcgtgaattcacattggccgagattgagcactttgtagatcctgagga 367 |||||||||||||| ||||||| || ||||||||||| ||||| ||||| Sbjct: 871 gtgcgtgaattcaccatggccgaaatcgagcactttgtcgatccagagga 920
>gb|BC007755.2| Homo sapiens glycyl-tRNA synthetase, mRNA (cDNA clone MGC:13304 IMAGE:4109682), complete cds Length = 2281 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 324 gaattcacattggccgagattgagcactttgtagatcc 361 ||||||||| |||| || |||||||||||||||||||| Sbjct: 1038 gaattcacaatggcagaaattgagcactttgtagatcc 1075 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||| ||||||||| |||||| |||||||| Sbjct: 1308 aatgagatggcccattatgcctgtgactgttgggatgc 1345
>gb|BC007722.2| Homo sapiens glycyl-tRNA synthetase, mRNA (cDNA clone MGC:12625 IMAGE:4299853), complete cds Length = 2318 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 324 gaattcacattggccgagattgagcactttgtagatcc 361 ||||||||| |||| || |||||||||||||||||||| Sbjct: 1080 gaattcacaatggcagaaattgagcactttgtagatcc 1117 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||| ||||||||| |||||| |||||||| Sbjct: 1350 aatgagatggcccattatgcctgtgactgttgggatgc 1387
>gb|BC000065.1| Homo sapiens glycyl-tRNA synthetase, mRNA (cDNA clone MGC:2643 IMAGE:3507766), complete cds Length = 2311 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 324 gaattcacattggccgagattgagcactttgtagatcc 361 ||||||||| |||| || |||||||||||||||||||| Sbjct: 1069 gaattcacaatggcagaaattgagcactttgtagatcc 1106 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||| ||||||||| |||||| |||||||| Sbjct: 1339 aatgagatggcccattatgcctgtgactgttgggatgc 1376
>emb|CR858629.1| Pongo pygmaeus mRNA; cDNA DKFZp459C0430 (from clone DKFZp459C0430) Length = 2494 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 324 gaattcacattggccgagattgagcactttgtagatcc 361 ||||||||| |||| || |||||||||||||||||||| Sbjct: 1122 gaattcacaatggcagaaattgagcactttgtagatcc 1159
>emb|CR610689.1| full-length cDNA clone CS0DI070YI06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2385 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 324 gaattcacattggccgagattgagcactttgtagatcc 361 ||||||||| |||| || |||||||||||||||||||| Sbjct: 1063 gaattcacaatggcagaaattgagcactttgtagatcc 1100 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||| ||||||||| |||||| |||||||| Sbjct: 1333 aatgagatggcccattatgcctgtgactgttgggatgc 1370
>dbj|AK074524.1| Homo sapiens cDNA FLJ90043 fis, clone HEMBA1002179, highly similar to Human glycyl-tRNA synthetase mRNA Length = 2476 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 324 gaattcacattggccgagattgagcactttgtagatcc 361 ||||||||| |||| || |||||||||||||||||||| Sbjct: 1123 gaattcacaatggcagaaattgagcactttgtagatcc 1160 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||| ||||||||| |||||| |||||||| Sbjct: 1393 aatgagatggcccattatgcctgtgactgttgggatgc 1430
>emb|CR594947.1| full-length cDNA clone CS0DE014YC03 of Placenta of Homo sapiens (human) Length = 1870 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 324 gaattcacattggccgagattgagcactttgtagatcc 361 ||||||||| |||| || |||||||||||||||||||| Sbjct: 518 gaattcacaatggcagaaattgagcactttgtagatcc 555 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||| ||||||||| |||||| |||||||| Sbjct: 788 aatgagatggcccattatgcctgtgactgttgggatgc 825
>gb|AC091719.3| Pan troglodytes clone RP43-26K2, complete sequence Length = 189864 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 324 gaattcacattggccgagattgagcactttgtagatcc 361 ||||||||| |||| || |||||||||||||||||||| Sbjct: 162645 gaattcacaatggcagaaattgagcactttgtagatcc 162682 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||| ||||||||| |||||| |||||||| Sbjct: 163971 aatgagatggcccattatgcctgtgactgttgggatgc 164008
>ref|XM_216152.3| PREDICTED: Rattus norvegicus glycyl-tRNA synthetase (predicted) (Gars_predicted), mRNA Length = 2496 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 324 gaattcacattggccgagattgagcactttgtagatcc 361 ||||||||| |||| ||||| ||||||||||||||||| Sbjct: 1165 gaattcacaatggcagagatcgagcactttgtagatcc 1202 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||| ||||||||| |||||||||||||| Sbjct: 1435 aatgagatggcccattatgcctgcgactgctgggatgc 1472
>ref|XM_575487.1| PREDICTED: Rattus norvegicus similar to Glycyl-tRNA synthetase (LOC500135), mRNA Length = 1398 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 324 gaattcacattggccgagattgagcactttgtagatcc 361 ||||||||| |||| ||||| ||||||||||||||||| Sbjct: 1210 gaattcacaatggcagagatcgagcactttgtagatcc 1247
>gb|AC004976.1|AC004976 Homo sapiens PAC clone RP5-1143H19 from 7p14-p15, complete sequence Length = 127425 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 324 gaattcacattggccgagattgagcactttgtagatcc 361 ||||||||| |||| || |||||||||||||||||||| Sbjct: 1648 gaattcacaatggcagaaattgagcactttgtagatcc 1685 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||| ||||||||| |||||| |||||||| Sbjct: 2973 aatgagatggcccattatgcctgtgactgttgggatgc 3010
>gb|BC110735.1| Xenopus laevis cDNA clone MGC:130901 IMAGE:7391514, complete cds Length = 2461 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||| ||||||||||||||| ||||||||||||||| Sbjct: 1326 aatgaaatggctcattatgcctgtgactgctgggatgc 1363 Score = 40.1 bits (20), Expect = 9.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 178 tgaggccagagactgcacagggtatttttgtcaacttcaa 217 ||||||||||||||||||| || || || |||||||||| Sbjct: 910 tgaggccagagactgcacaaggaatcttcctcaacttcaa 949
>dbj|D30658.1|HUMGLYCYL Homo sapiens mRNA for glycyl tRNA synthetase, complete cds Length = 2283 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 324 gaattcacattggccgagattgagcactttgtagatcc 361 ||||||||| |||| || |||||||||||||||||||| Sbjct: 1057 gaattcacaatggcagaaattgagcactttgtagatcc 1094 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||| ||||||||| |||||| |||||||| Sbjct: 1327 aatgagatggcccattatgcctgtgactgttgggatgc 1364
>gb|BC088347.1| Rattus norvegicus glycyl-tRNA synthetase, mRNA (cDNA clone IMAGE:7368341), partial cds Length = 2083 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 324 gaattcacattggccgagattgagcactttgtagatcc 361 ||||||||| |||| ||||| ||||||||||||||||| Sbjct: 729 gaattcacaatggcagagatcgagcactttgtagatcc 766 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||| ||||||||| |||||||||||||| Sbjct: 999 aatgagatggcccattatgcctgcgactgctgggatgc 1036
>gb|U09510.1|HSU09510 Human glycyl-tRNA synthetase mRNA, complete cds Length = 2462 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 324 gaattcacattggccgagattgagcactttgtagatcc 361 ||||||||| |||| || |||||||||||||||||||| Sbjct: 1235 gaattcacaatggcagaaattgagcactttgtagatcc 1272 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||| ||||||||| |||||| |||||||| Sbjct: 1505 aatgagatggcccattatgcctgtgactgttgggatgc 1542
>gb|U09587.1|HSU09587 Human glycyl-tRNA synthetase mRNA, complete cds Length = 2380 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 324 gaattcacattggccgagattgagcactttgtagatcc 361 ||||||||| |||| || |||||||||||||||||||| Sbjct: 1027 gaattcacaatggcagaaattgagcactttgtagatcc 1064 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||| ||||||||| |||||| |||||||| Sbjct: 1297 aatgagatggcccattatgcctgtgactgttgggatgc 1334
>gb|BC021747.1| Mus musculus glycyl-tRNA synthetase, mRNA (cDNA clone MGC:30342 IMAGE:4192628), complete cds Length = 2380 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Plus Query: 334 tggccgagattgagcactttgtagatcc 361 |||| ||||||||||||||||||||||| Sbjct: 1035 tggcagagattgagcactttgtagatcc 1062 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||| ||||||||| |||||||||||||| Sbjct: 1295 aatgagatggcccattatgcctgcgactgctgggatgc 1332
>ref|NM_180678.3| Mus musculus glycyl-tRNA synthetase (Gars), mRNA Length = 2390 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Plus Query: 334 tggccgagattgagcactttgtagatcc 361 |||| ||||||||||||||||||||||| Sbjct: 1054 tggcagagattgagcactttgtagatcc 1081 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||| ||||||||| |||||||||||||| Sbjct: 1314 aatgagatggcccattatgcctgcgactgctgggatgc 1351
>gb|AY810306.1| Schistosoma japonicum SJCHGC07371 protein mRNA, partial cds Length = 630 Score = 48.1 bits (24), Expect = 0.040 Identities = 45/52 (86%) Strand = Plus / Plus Query: 580 gacagcatctacctaatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||| | ||||| ||||||||||||||| ||| || |||||||| Sbjct: 371 gacagcatctatcaaatgaaatggctcattatgcctgtgattgttgggatgc 422
>ref|XM_723830.1| Plasmodium yoelii yoelii str. 17XNL glycyl-tRNA synthetase (PY01198) partial mRNA Length = 2391 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Plus Query: 674 tgcagatagatctgcatatgatttaaaa 701 ||||||||||||||| |||||||||||| Sbjct: 1545 tgcagatagatctgcttatgatttaaaa 1572
>gb|AC079243.7| Mus musculus strain C57BL6/J chromosome 6 clone RP23-64M7, complete sequence Length = 205508 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Plus Query: 334 tggccgagattgagcactttgtagatcc 361 |||| ||||||||||||||||||||||| Sbjct: 26803 tggcagagattgagcactttgtagatcc 26830 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||| ||||||||| |||||||||||||| Sbjct: 29257 aatgagatggcccattatgcctgcgactgctgggatgc 29294
>ref|XM_779073.1| PREDICTED: Strongylocentrotus purpuratus similar to Glycyl-tRNA synthetase (Glycine--tRNA ligase) (GlyRS) (LOC578936), mRNA Length = 2055 Score = 48.1 bits (24), Expect = 0.040 Identities = 36/40 (90%) Strand = Plus / Plus Query: 597 gagatggctcattatgccgctgactgctgggatgcggaga 636 |||||||||||||||||| | || ||||||||||| |||| Sbjct: 1159 gagatggctcattatgccaccgattgctgggatgctgaga 1198
>dbj|AB225301.1| Aspergillus oryzae cDNA, contig sequence: AoEST2153 Length = 1212 Score = 48.1 bits (24), Expect = 0.040 Identities = 36/40 (90%) Strand = Plus / Plus Query: 592 ctaatgagatggctcattatgccgctgactgctgggatgc 631 ||||||| |||||||| || || ||||||||||||||||| Sbjct: 78 ctaatgaaatggctcactacgctgctgactgctgggatgc 117
>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 Length = 1913118 Score = 48.1 bits (24), Expect = 0.040 Identities = 36/40 (90%) Strand = Plus / Minus Query: 592 ctaatgagatggctcattatgccgctgactgctgggatgc 631 ||||||| |||||||| || || ||||||||||||||||| Sbjct: 1799063 ctaatgaaatggctcactacgctgctgactgctgggatgc 1799024
>dbj|AK146238.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730038J10 product:glycyl-tRNA synthetase, full insert sequence Length = 2353 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Plus Query: 334 tggccgagattgagcactttgtagatcc 361 |||| ||||||||||||||||||||||| Sbjct: 1031 tggcagagattgagcactttgtagatcc 1058 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||| ||||||||| |||||||||||||| Sbjct: 1291 aatgagatggcccattatgcctgcgactgctgggatgc 1328
>dbj|AK165857.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730008B13 product:glycyl-tRNA synthetase, full insert sequence Length = 2324 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Plus Query: 334 tggccgagattgagcactttgtagatcc 361 |||| ||||||||||||||||||||||| Sbjct: 1002 tggcagagattgagcactttgtagatcc 1029 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||| ||||||||| |||||||||||||| Sbjct: 1262 aatgagatggcccattatgcctgcgactgctgggatgc 1299
>dbj|AK012758.2| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810017N01 product:glycyl-tRNA synthetase, full insert sequence Length = 2280 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Plus Query: 334 tggccgagattgagcactttgtagatcc 361 |||| ||||||||||||||||||||||| Sbjct: 1049 tggcagagattgagcactttgtagatcc 1076 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||| ||||||||| |||||||||||||| Sbjct: 1309 aatgagatggcccattatgcctgcgactgctgggatgc 1346
>dbj|AK212952.1| Mus musculus cDNA, clone:Y2G0126K15, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000003572, based on BLAT search Length = 377 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Plus Query: 334 tggccgagattgagcactttgtagatcc 361 |||| ||||||||||||||||||||||| Sbjct: 239 tggcagagattgagcactttgtagatcc 266
>dbj|AK203488.1| Mus musculus cDNA, clone:Y1G0145B06, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000003572, based on BLAT search Length = 371 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Plus Query: 334 tggccgagattgagcactttgtagatcc 361 |||| ||||||||||||||||||||||| Sbjct: 179 tggcagagattgagcactttgtagatcc 206
>dbj|AK196051.1| Mus musculus cDNA, clone:Y1G0120I11, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000003572, based on BLAT search Length = 387 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Plus Query: 334 tggccgagattgagcactttgtagatcc 361 |||| ||||||||||||||||||||||| Sbjct: 220 tggcagagattgagcactttgtagatcc 247
>dbj|AK194283.1| Mus musculus cDNA, clone:Y1G0114N07, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000003572, based on BLAT search Length = 388 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Plus Query: 334 tggccgagattgagcactttgtagatcc 361 |||| ||||||||||||||||||||||| Sbjct: 196 tggcagagattgagcactttgtagatcc 223
>dbj|AK191539.1| Mus musculus cDNA, clone:Y1G0106D10, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000003572, based on BLAT search Length = 433 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Plus Query: 334 tggccgagattgagcactttgtagatcc 361 |||| ||||||||||||||||||||||| Sbjct: 241 tggcagagattgagcactttgtagatcc 268
>dbj|AK190448.1| Mus musculus cDNA, clone:Y1G0102M13, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000003572, based on BLAT search Length = 392 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Plus Query: 334 tggccgagattgagcactttgtagatcc 361 |||| ||||||||||||||||||||||| Sbjct: 220 tggcagagattgagcactttgtagatcc 247
>dbj|AK190416.1| Mus musculus cDNA, clone:Y1G0102K24, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000003572, based on BLAT search Length = 387 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Plus Query: 334 tggccgagattgagcactttgtagatcc 361 |||| ||||||||||||||||||||||| Sbjct: 118 tggcagagattgagcactttgtagatcc 145
>ref|XM_532502.2| PREDICTED: Canis familiaris similar to Glycyl-tRNA synthetase (Glycine--tRNA ligase) (GlyRS) (LOC475268), mRNA Length = 2391 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Plus Query: 327 ttcacattggccgagattgagcactttgtagatcc 361 |||||| |||| || |||||||||||||||||||| Sbjct: 1059 ttcacaatggcagaaattgagcactttgtagatcc 1093
>gb|AF309805.1|AF309805 Pneumocystis carinii f. sp. carinii glutathione synthetase Gsh1 (gsh1) gene, partial cds; putative a-factor pheromone receptor Ste3 (ste3) gene, complete cds, alternatively spliced; and Ydr124wp-like protein, helix-loop-helix DNA binding protein, Yer049wp-like protein, protein kinase Ste20 (ste20), putative sucrose carrier Sca1 (sca1), putative Na+/H+ exchanger Nhx1 (nhx1), putative 26S protease regulatory subunit 4 (mts2), hypothetical protein, glycyl tRNA synthetase, and coiled-coil protein genes, complete cds Length = 32083 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Minus Query: 324 gaattcacattggccgagattgagcactttgtagatcct 362 ||||| ||| |||| ||||||||||||| |||||||||| Sbjct: 29579 gaatttacaatggcagagattgagcactatgtagatcct 29541
>ref|XM_614980.2| PREDICTED: Bos taurus glycyl-tran synthetase (GARS), partial mRNA Length = 1798 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||| ||||||||| |||||| |||||||| Sbjct: 568 aatgagatggcccattatgcctgtgactgttgggatgc 605 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 324 gaattcacattggccgagattgagcactttgtagatcc 361 ||||||||| |||| || |||||||| ||||||||||| Sbjct: 298 gaattcacaatggcagaaattgagcattttgtagatcc 335
>gb|AY568575.1| Bos taurus glycyl-tran synthetase (GARS) mRNA, partial cds Length = 1738 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||| ||||||||| |||||| |||||||| Sbjct: 694 aatgagatggcccattatgcctgtgactgttgggatgc 731 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 324 gaattcacattggccgagattgagcactttgtagatcc 361 ||||||||| |||| || |||||||| ||||||||||| Sbjct: 424 gaattcacaatggcagaaattgagcattttgtagatcc 461
>gb|BC021081.1| Homo sapiens cDNA clone IMAGE:3546266, **** WARNING: chimeric clone **** Length = 3822 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 594 aatgagatggctcattatgccgctgactgctgggatgc 631 ||||||||||| ||||||||| |||||| |||||||| Sbjct: 2853 aatgagatggcccattatgcctgtgactgttgggatgc 2890
>ref|XM_503947.1| Yarrowia lipolytica CLIB122, YALI0E14597g predicted mRNA Length = 1971 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 334 tggccgagattgagcactttgt 355 |||||||||||||||||||||| Sbjct: 803 tggccgagattgagcactttgt 824
>emb|BX890589.11| Zebrafish DNA sequence from clone DKEY-14I16 in linkage group 5, complete sequence Length = 204925 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 392 tgttgctgatttggagtttttg 413 |||||||||||||||||||||| Sbjct: 183724 tgttgctgatttggagtttttg 183745
>gb|AC091658.3| Papio anubis clone RP41-353N1, complete sequence Length = 113053 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 324 gaattcacattggccgagattgagcactttgtagatcc 361 ||||||||| |||| || |||||||||||||| ||||| Sbjct: 75107 gaattcacaatggcagaaattgagcactttgtcgatcc 75144
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 44.1 bits (22), Expect = 0.62 Identities = 31/34 (91%) Strand = Plus / Plus Query: 650 tggatggatagagtgtgtgggcattgcagataga 683 ||||||||| |||||||| || |||||||||||| Sbjct: 220075 tggatggattgagtgtgttgggattgcagataga 220108
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 334 tggccgagattgagcactttgt 355 |||||||||||||||||||||| Sbjct: 1743829 tggccgagattgagcactttgt 1743808
>emb|AL928681.5| Mouse DNA sequence from clone RP23-82M15 on chromosome 2, complete sequence Length = 125926 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 493 ttaataatgagacacttggtta 514 |||||||||||||||||||||| Sbjct: 74795 ttaataatgagacacttggtta 74816
>ref|XM_631864.1| Dictyostelium discoideum hypothetical protein (DDB0219299), partial mRNA Length = 630 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 382 agtttgttgatgttgctgatttggagttt 410 ||||||||||||||| | ||||||||||| Sbjct: 342 agtttgttgatgttgtttatttggagttt 314
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome Length = 2572079 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 261 gctcaaattggtcaagcattccgtaacga 289 |||||||||||| |||| ||||||||||| Sbjct: 39090 gctcaaattggtaaagctttccgtaacga 39062
>ref|XM_447085.1| Candida glabrata CBS138, CAGL0H06655g partial mRNA Length = 1275 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 tgatgttgctgatttggagtt 409 ||||||||||||||||||||| Sbjct: 123 tgatgttgctgatttggagtt 143
>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence Length = 1050361 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 tgatgttgctgatttggagtt 409 ||||||||||||||||||||| Sbjct: 662865 tgatgttgctgatttggagtt 662845
>gb|AC021518.12| Homo sapiens chromosome 8, clone RP11-313D2, complete sequence Length = 169566 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 agagagctgcaactctcaggg 443 ||||||||||||||||||||| Sbjct: 130234 agagagctgcaactctcaggg 130254
>gb|AC012535.11| Homo sapiens chromosome 8, clone RP11-115G12, complete sequence Length = 173414 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 agagagctgcaactctcaggg 443 ||||||||||||||||||||| Sbjct: 144102 agagagctgcaactctcaggg 144122
>gb|AC099791.2| Homo sapiens chromosome 1 clone RP11-430G17, complete sequence Length = 239704 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 ccattcaatcttatgttccag 140 ||||||||||||||||||||| Sbjct: 107056 ccattcaatcttatgttccag 107036
>gb|AC013492.5|AC013492 Homo sapiens chromosome , clone RP11-32K4, complete sequence Length = 167174 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 agagagctgcaactctcaggg 443 ||||||||||||||||||||| Sbjct: 61602 agagagctgcaactctcaggg 61622
>gb|AC007224.5| Homo sapiens chromosome 16 clone RP11-475D10, complete sequence Length = 185327 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 423 agagagctgcaactctcaggg 443 ||||||||||||||||||||| Sbjct: 134699 agagagctgcaactctcaggg 134719
>gb|AC092959.6| Homo sapiens 3 BAC RP11-649A16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179714 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 atatgaggccagagactgcac 195 ||||||||||||||||||||| Sbjct: 105639 atatgaggccagagactgcac 105659
>emb|Z58106.1|HS29H2R H.sapiens CpG island DNA genomic Mse1 fragment, clone 29h2, reverse read cpg29h2.rt1a Length = 312 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 atatgaggccagagactgcac 195 ||||||||||||||||||||| Sbjct: 208 atatgaggccagagactgcac 188
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome Length = 2201561 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tgatgttgctgatttggagt 408 |||||||||||||||||||| Sbjct: 39405 tgatgttgctgatttggagt 39386
>gb|AC109298.19| Mus musculus chromosome 3, clone RP24-271A4, complete sequence Length = 191546 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 tttgtcaacttcaaggactt 223 |||||||||||||||||||| Sbjct: 13281 tttgtcaacttcaaggactt 13262
>ref|XM_748947.1| Aspergillus fumigatus Af293 glycyl-tRNA synthetase (Afu5g05920) partial mRNA Length = 2100 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 123 ttcaatcttatgttccagacatcaattggccc 154 ||||| || ||||||||||| ||||||||||| Sbjct: 724 ttcaacctcatgttccagacctcaattggccc 755
>gb|AC118595.6| Mus musculus chromosome 3, clone RP24-481I21, complete sequence Length = 248188 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 ctatccattcaatcttatgt 135 |||||||||||||||||||| Sbjct: 117049 ctatccattcaatcttatgt 117030
>emb|Z97192.2|HS29C18 Human DNA sequence from clone RP1-29C18 on chromosome 22, complete sequence Length = 143701 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 tacaatggccaaaaacttcc 250 |||||||||||||||||||| Sbjct: 113929 tacaatggccaaaaacttcc 113948
>emb|AL445592.15| Human DNA sequence from clone RP11-660M15 on chromosome 9 Contains part of the JMJD2C gene for jumonji domain containing 2C, complete sequence Length = 69706 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 tccctatccattcaatctta 132 |||||||||||||||||||| Sbjct: 12353 tccctatccattcaatctta 12334
>gb|AC132401.4| Mus musculus BAC clone RP23-404A8 from chromosome 3, complete sequence Length = 200657 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 tttgtcaacttcaaggactt 223 |||||||||||||||||||| Sbjct: 77825 tttgtcaacttcaaggactt 77844
>gb|AC091209.3| Drosophila melanogaster 3L BAC RP98-3G6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194979 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 taatgagacacttggttact 516 |||||||||||||||||||| Sbjct: 114410 taatgagacacttggttact 114429
>gb|AC010071.6| Drosophila melanogaster 3L BAC RP98-18G16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172540 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 taatgagacacttggttact 516 |||||||||||||||||||| Sbjct: 142135 taatgagacacttggttact 142116
>dbj|AB225939.1| Aspergillus oryzae cDNA, contig sequence: AoEST2795 Length = 944 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 ttcggcacgaggcgcgtccttgct 24 ||||||||||||| |||||||||| Sbjct: 25 ttcggcacgaggcccgtccttgct 48
>ref|NM_168605.1| Drosophila melanogaster Glycyl-tRNA synthetase CG6778-RB, transcript variant B (Aats-gly), mRNA Length = 2509 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 taatgagacacttggttact 516 |||||||||||||||||||| Sbjct: 1382 taatgagacacttggttact 1401
>ref|NM_140489.2| Drosophila melanogaster Glycyl-tRNA synthetase CG6778-RA, transcript variant A (Aats-gly), mRNA Length = 2447 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 taatgagacacttggttact 516 |||||||||||||||||||| Sbjct: 1320 taatgagacacttggttact 1339
>gb|AC069020.8| Homo sapiens chromosome 10 clone RP11-165K20, complete sequence Length = 171413 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 103 cactctctgctccctatccattca 126 ||||||||| |||||||||||||| Sbjct: 77257 cactctctgttccctatccattca 77234
>gb|AC069540.6| Homo sapiens chromosome 10 clone RP11-344L13, complete sequence Length = 201182 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 ttgctgatttggagtttttg 413 |||||||||||||||||||| Sbjct: 182882 ttgctgatttggagtttttg 182863
>gb|AY051413.1| Drosophila melanogaster GH09263 full length cDNA Length = 2462 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 taatgagacacttggttact 516 |||||||||||||||||||| Sbjct: 1320 taatgagacacttggttact 1339
>dbj|AK052066.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230041C24 product:unclassifiable, full insert sequence Length = 2404 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 ctatccattcaatcttatgt 135 |||||||||||||||||||| Sbjct: 1014 ctatccattcaatcttatgt 995
>gb|AC092232.1|AC092232 Drosophila melanogaster, chromosome 2L, region 24E-24F, BAC clone BACR28K16, complete sequence Length = 182897 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 ttgctgatttggagtttttg 413 |||||||||||||||||||| Sbjct: 78199 ttgctgatttggagtttttg 78218
>emb|BX323843.9| Zebrafish DNA sequence from clone CH211-10A23 in linkage group 19, complete sequence Length = 128245 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 607 attatgccgctgactgctgg 626 |||||||||||||||||||| Sbjct: 66968 attatgccgctgactgctgg 66987
>gb|AC027702.18| Homo sapiens chromosome 8, clone RP11-108L9, complete sequence Length = 125719 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 ttccagacatcaattggcccaaca 158 |||| ||||||||||||||||||| Sbjct: 108050 ttcccgacatcaattggcccaaca 108027
>dbj|AK203428.1| Mus musculus cDNA, clone:Y1G0144N10, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000003572, based on BLAT search Length = 377 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 334 tggccgagattgagcactttgtagatcc 361 |||| ||||||||||||||||| ||||| Sbjct: 221 tggcagagattgagcactttgtcgatcc 248
>dbj|AK195104.1| Mus musculus cDNA, clone:Y1G0117G12, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000003572, based on BLAT search Length = 393 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 334 tggccgagattgagcactttgtagatcc 361 |||| |||||||||||| |||||||||| Sbjct: 201 tggcagagattgagcaccttgtagatcc 228
>gb|AE003576.5| Drosophila melanogaster chromosome 2L, section 15 of 83 of the complete sequence Length = 289893 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 ttgctgatttggagtttttg 413 |||||||||||||||||||| Sbjct: 129468 ttgctgatttggagtttttg 129449
>gb|AE003532.3| Drosophila melanogaster chromosome 3L, section 53 of 83 of the complete sequence Length = 295875 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 taatgagacacttggttact 516 |||||||||||||||||||| Sbjct: 174963 taatgagacacttggttact 174982
>gb|AC004267.1|AC004267 Drosophila melanogaster DNA sequence (P1 DS07968 (D117)), complete sequence Length = 31557 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 ttgctgatttggagtttttg 413 |||||||||||||||||||| Sbjct: 3689 ttgctgatttggagtttttg 3670
>gb|AC158992.2| Mus musculus BAC clone RP24-396L14 from chromosome 9, complete sequence Length = 163838 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 649 atggatggatagagtgtgtg 668 |||||||||||||||||||| Sbjct: 130114 atggatggatagagtgtgtg 130133
>emb|AL845261.17| Mouse DNA sequence from clone RP23-174C9 on chromosome 2, complete sequence Length = 182370 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 691 atgatttaaaagctcattct 710 |||||||||||||||||||| Sbjct: 53824 atgatttaaaagctcattct 53805 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,946,660 Number of Sequences: 3902068 Number of extensions: 5946660 Number of successful extensions: 105063 Number of sequences better than 10.0: 116 Number of HSP's better than 10.0 without gapping: 116 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 104608 Number of HSP's gapped (non-prelim): 444 length of query: 710 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 687 effective length of database: 17,143,297,704 effective search space: 11777445522648 effective search space used: 11777445522648 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
