>SC61A_YEAST (P32915) Protein transport protein SEC61 alpha subunit|
          Length = 480

 Score = 31.2 bits (69), Expect = 0.99
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +1

Query: 160 LPSNSYLDLGGPYGKFVPFIIAGEGGFGEHKQLNWTNLFLL 282
           + SN  LDL  P+  F+P +IA E     +++L WT + LL
Sbjct: 1   MSSNRVLDLFKPFESFLPEVIAPERKVPYNQKLIWTGVSLL 41

>PMT7_YEAST (Q06644) Dolichyl-phosphate-mannose--protein mannosyltransferase 7|
           (EC 2.4.1.109)
          Length = 662

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 178 LDLGGPYGKFVPFIIAGEGGFGEHKQLNWTNLFLL 282
           L L GPY K++P+ I  + G G  K L++   FL+
Sbjct: 4   LRLQGPYRKYIPYNIFQQCGIGHLKTLDYIFAFLI 38

>PRTR_PSEAE (Q06553) HTH-type transcriptional regulator prtR (Pyocin repressor|
           protein)
          Length = 256

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 109 YRLPQAGVRTSNFERRELPSNSY 177
           YRLP  G+R  +F R E P   Y
Sbjct: 202 YRLPGGGIRLRSFNREEYPDEEY 224

>AAT_THEAQ (O33822) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)|
           (ASPAT)
          Length = 383

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
 Frame = -3

Query: 357 FNIF-LYFDLIDHLIMIAAYVTA--KLVQ*KQVCPVELLMLPKAPFTSDYERHKFSIRPT 187
           FN+F    D  D +I++A Y  +  ++V+     PVE+  LP+  F  D ER + +I P 
Sbjct: 105 FNLFQAILDPGDEVIVLAPYWVSYPEMVRFAGGVPVEVPTLPEEGFVPDPERVRRAITP- 163

Query: 186 QIKVAV*WKLPTLEIGSPNS 127
                   +   L + SPN+
Sbjct: 164 --------RTKALVVNSPNN 175


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,355,170
Number of Sequences: 219361
Number of extensions: 997470
Number of successful extensions: 1985
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1985
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)