ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags19f19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT018666.1| Zea mays clone EL01N0510C04.d mRNA sequence Length = 1646 Score = 420 bits (212), Expect = e-114 Identities = 381/438 (86%) Strand = Plus / Plus Query: 35 ggggtctacaccattgtcattgggagtcacatctcgacgatctatcattatggatttgca 94 ||||||||||||||||||||||| ||||||||||| | ||||| || || || || ||| Sbjct: 799 ggggtctacaccattgtcattggcagtcacatctcagccatctaccactacggcttcgca 858 Query: 95 aaccttatgatgcgcaggtatgttgatgctaccaaggaattcaacaaaattctgctttat 154 |||||||||||||||||||||||||| || || ||||||||||| ||||| || ||| Sbjct: 859 aaccttatgatgcgcaggtatgttgaggccactcgtgaattcaacaagattcttctgtat 918 Query: 155 attataaagtataagcagtaccatcagaaatcccctcagtacgaccagattctgaagaaa 214 || | ||||| ||||||||||| ||||| ||||||||||| || ||||| ||||||||| Sbjct: 919 atcctcaagtacaagcagtaccaccagaattcccctcagtatgatcagatactgaagaaa 978 Query: 215 aatgagcagatgtatgcgctgctggcaatttgcctatctctgtgtccgcaaaacaaactc 274 ||||||||||||||||| || ||||||||||||||||| |||| || || ||||| ||| Sbjct: 979 aatgagcagatgtatgcattgttggcaatttgcctatctttgtgcccacagaacaagctc 1038 Query: 275 atagatgaaaatgttagcacccagctgaaagaaaagtacaatgacaaaatgacaaanatg 334 || ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||| Sbjct: 1039 attgatgaaaatgttagcacccagctgaaagaaaagtataatgacaaaatgacgaagatg 1098 Query: 335 cagaggtttgatgatgaagcatatgctgcctatgatgagctattttcgtacgcctgcccc 394 ||||||| ||||||||||||||||||||| |||||||||||||| ||||| || |||||| Sbjct: 1099 cagaggtatgatgatgaagcatatgctgcttatgatgagctattctcgtatgcttgcccc 1158 Query: 395 aagtttattactccatcacctccagttctggaccagccacttacaaattataaccaggac 454 ||||| ||||| || || ||||| ||||||||||||| || ||||| ||||||||||| Sbjct: 1159 aagttcattacaccgtcgcctccnattctggaccagccgctaacaaactataaccaggat 1218 Query: 455 gcctatcggcttcagttg 472 || || || ||||||||| Sbjct: 1219 gcataccgtcttcagttg 1236
>gb|AY104376.1| Zea mays PCO082841 mRNA sequence Length = 1869 Score = 418 bits (211), Expect = e-114 Identities = 381/438 (86%) Strand = Plus / Plus Query: 35 ggggtctacaccattgtcattgggagtcacatctcgacgatctatcattatggatttgca 94 |||||||||||||||||||||||||| |||||||| | ||||| || || || || ||| Sbjct: 889 ggggtctacaccattgtcattgggagccacatctcagccatctaccactacggcttcgca 948 Query: 95 aaccttatgatgcgcaggtatgttgatgctaccaaggaattcaacaaaattctgctttat 154 |||||||||||||||||||||||||| || || ||||||||||| ||||| || ||| Sbjct: 949 aaccttatgatgcgcaggtatgttgaggccactcgtgaattcaacaagattcttctgtat 1008 Query: 155 attataaagtataagcagtaccatcagaaatcccctcagtacgaccagattctgaagaaa 214 || | ||||| ||||||||||| ||||| ||||||||||| || ||||| ||||||||| Sbjct: 1009 atcctcaagtacaagcagtaccaccagaattcccctcagtatgatcagatactgaagaaa 1068 Query: 215 aatgagcagatgtatgcgctgctggcaatttgcctatctctgtgtccgcaaaacaaactc 274 ||||||||||||||||| || ||||||||||||||||| |||| || || ||||| ||| Sbjct: 1069 aatgagcagatgtatgcattgttggcaatttgcctatctttgtgcccacagaacaagctc 1128 Query: 275 atagatgaaaatgttagcacccagctgaaagaaaagtacaatgacaaaatgacaaanatg 334 || ||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||| Sbjct: 1129 attgatgaaaatgttagcacccagctgaaagaaaagtataatgacaagatgacaaagatg 1188 Query: 335 cagaggtttgatgatgaagcatatgctgcctatgatgagctattttcgtacgcctgcccc 394 ||||||| ||||||||||||||| ||||| |||||||||||||| ||||| || |||||| Sbjct: 1189 cagaggtatgatgatgaagcatacgctgcttatgatgagctattctcgtatgcttgcccc 1248 Query: 395 aagtttattactccatcacctccagttctggaccagccacttacaaattataaccaggac 454 ||||| ||||| || || |||||| ||||||||||||| || ||||| ||||||||||| Sbjct: 1249 aagttcattacaccgtcgcctccaattctggaccagccgctaacaaactataaccaggat 1308 Query: 455 gcctatcggcttcagttg 472 || || || ||||||||| Sbjct: 1309 gcataccgtcttcagttg 1326
>ref|NM_188595.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1698 Score = 392 bits (198), Expect = e-106 Identities = 389/452 (86%), Gaps = 1/452 (0%) Strand = Plus / Plus Query: 3 aagtgcttggcaccgattaaccttaacn-gcagggggtctacaccattgtcattgggagt 61 |||||||||||||| || |||||||| ||||||||||||||||||||| ||||||||| Sbjct: 757 aagtgcttggcaccaatcgaccttaaccagcagggggtctacaccattgtgattgggagt 816 Query: 62 cacatctcgacgatctatcattatggatttgcaaaccttatgatgcgcaggtatgttgat 121 |||||||| | ||||| || ||||| |||||||| |||||||||||||| |||| ||| Sbjct: 817 cacatctctgctatctaccactatggctttgcaaatcttatgatgcgcagatatgctgaa 876 Query: 122 gctaccaaggaattcaacaaaattctgctttatattataaagtataagcagtaccatcag 181 || | |||||||||||||| |||| || ||| | || |||||||||||||||||| Sbjct: 877 gccatacgtgaattcaacaaaatcttgctgtacattctgaaatataagcagtaccatcag 936 Query: 182 aaatcccctcagtacgaccagattctgaagaaaaatgagcagatgtatgcgctgctggca 241 || ||||| ||||| |||||||| ||||||||||||| ||||||||||| | ||||| Sbjct: 937 aagtccccgcagtatgaccagatcttgaagaaaaatgaacagatgtatgccttcttggca 996 Query: 242 atttgcctatctctgtgtccgcaaaacaaactcatagatgaaaatgttagcacccagctg 301 ||||||| || | || ||||| |||| ||||| ||||| |||||||||||||||||| Sbjct: 997 gtttgcctttccttatgcccgcagcacaacctcattgatgagaatgttagcacccagctg 1056 Query: 302 aaagaaaagtacaatgacaaaatgacaaanatgcagaggtttgatgatgaagcatatgct 361 ||||||||||| ||||||||||||||||| ||||||||||||||||| ||| | |||||| Sbjct: 1057 aaagaaaagtataatgacaaaatgacaaagatgcagaggtttgatgaggaaacctatgct 1116 Query: 362 gcctatgatgagctattttcgtacgcctgccccaagtttattactccatcacctccagtt 421 || |||||||| || ||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 1117 gcgtatgatgaactgttttcatacgcatgccccaagtttattactccatcacctccagcc 1176 Query: 422 ctggaccagccacttacaaattataaccagga 453 ||||| |||||||||||||||||||||||||| Sbjct: 1177 ctggatcagccacttacaaattataaccagga 1208
>dbj|AK070838.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073J07, full insert sequence Length = 1877 Score = 392 bits (198), Expect = e-106 Identities = 389/452 (86%), Gaps = 1/452 (0%) Strand = Plus / Plus Query: 3 aagtgcttggcaccgattaaccttaacn-gcagggggtctacaccattgtcattgggagt 61 |||||||||||||| || |||||||| ||||||||||||||||||||| ||||||||| Sbjct: 788 aagtgcttggcaccaatcgaccttaaccagcagggggtctacaccattgtgattgggagt 847 Query: 62 cacatctcgacgatctatcattatggatttgcaaaccttatgatgcgcaggtatgttgat 121 |||||||| | ||||| || ||||| |||||||| |||||||||||||| |||| ||| Sbjct: 848 cacatctctgctatctaccactatggctttgcaaatcttatgatgcgcagatatgctgaa 907 Query: 122 gctaccaaggaattcaacaaaattctgctttatattataaagtataagcagtaccatcag 181 || | |||||||||||||| |||| || ||| | || |||||||||||||||||| Sbjct: 908 gccatacgtgaattcaacaaaatcttgctgtacattctgaaatataagcagtaccatcag 967 Query: 182 aaatcccctcagtacgaccagattctgaagaaaaatgagcagatgtatgcgctgctggca 241 || ||||| ||||| |||||||| ||||||||||||| ||||||||||| | ||||| Sbjct: 968 aagtccccgcagtatgaccagatcttgaagaaaaatgaacagatgtatgccttcttggca 1027 Query: 242 atttgcctatctctgtgtccgcaaaacaaactcatagatgaaaatgttagcacccagctg 301 ||||||| || | || ||||| |||| ||||| ||||| |||||||||||||||||| Sbjct: 1028 gtttgcctttccttatgcccgcagcacaacctcattgatgagaatgttagcacccagctg 1087 Query: 302 aaagaaaagtacaatgacaaaatgacaaanatgcagaggtttgatgatgaagcatatgct 361 ||||||||||| ||||||||||||||||| ||||||||||||||||| ||| | |||||| Sbjct: 1088 aaagaaaagtataatgacaaaatgacaaagatgcagaggtttgatgaggaaacctatgct 1147 Query: 362 gcctatgatgagctattttcgtacgcctgccccaagtttattactccatcacctccagtt 421 || |||||||| || ||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 1148 gcgtatgatgaactgttttcatacgcatgccccaagtttattactccatcacctccagcc 1207 Query: 422 ctggaccagccacttacaaattataaccagga 453 ||||| |||||||||||||||||||||||||| Sbjct: 1208 ctggatcagccacttacaaattataaccagga 1239
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 315 bits (159), Expect = 7e-83 Identities = 281/322 (87%) Strand = Plus / Minus Query: 131 gaattcaacaaaattctgctttatattataaagtataagcagtaccatcagaaatcccct 190 |||||||||||||| |||| || ||| | || |||||||||||||||||||| ||||| Sbjct: 7126446 gaattcaacaaaatcttgctgtacattctgaaatataagcagtaccatcagaagtccccg 7126387 Query: 191 cagtacgaccagattctgaagaaaaatgagcagatgtatgcgctgctggcaatttgccta 250 ||||| |||||||| ||||||||||||| ||||||||||| | ||||| ||||||| Sbjct: 7126386 cagtatgaccagatcttgaagaaaaatgaacagatgtatgccttcttggcagtttgcctt 7126327 Query: 251 tctctgtgtccgcaaaacaaactcatagatgaaaatgttagcacccagctgaaagaaaag 310 || | || ||||| |||| ||||| ||||| ||||||||||||||||||||||||||| Sbjct: 7126326 tccttatgcccgcagcacaacctcattgatgagaatgttagcacccagctgaaagaaaag 7126267 Query: 311 tacaatgacaaaatgacaaanatgcagaggtttgatgatgaagcatatgctgcctatgat 370 || ||||||||||||||||| ||||||||||||||||| ||| | |||||||| |||||| Sbjct: 7126266 tataatgacaaaatgacaaagatgcagaggtttgatgaggaaacctatgctgcgtatgat 7126207 Query: 371 gagctattttcgtacgcctgccccaagtttattactccatcacctccagttctggaccag 430 || || ||||| ||||| ||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 7126206 gaactgttttcatacgcatgccccaagtttattactccatcacctccagccctggatcag 7126147 Query: 431 ccacttacaaattataaccagg 452 |||||||||||||||||||||| Sbjct: 7126146 ccacttacaaattataaccagg 7126125 Score = 115 bits (58), Expect = 1e-22 Identities = 100/113 (88%), Gaps = 1/113 (0%) Strand = Plus / Minus Query: 3 aagtgcttggcaccgattaaccttaacn-gcagggggtctacaccattgtcattgggagt 61 |||||||||||||| || |||||||| ||||||||||||||||||||| ||||||||| Sbjct: 7126868 aagtgcttggcaccaatcgaccttaaccagcagggggtctacaccattgtgattgggagt 7126809 Query: 62 cacatctcgacgatctatcattatggatttgcaaaccttatgatgcgcaggta 114 |||||||| | ||||| || ||||| |||||||| ||||||||||||||||| Sbjct: 7126808 cacatctctgctatctaccactatggctttgcaaatcttatgatgcgcaggta 7126756
>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485D09 Length = 150594 Score = 315 bits (159), Expect = 7e-83 Identities = 281/322 (87%) Strand = Plus / Minus Query: 131 gaattcaacaaaattctgctttatattataaagtataagcagtaccatcagaaatcccct 190 |||||||||||||| |||| || ||| | || |||||||||||||||||||| ||||| Sbjct: 21094 gaattcaacaaaatcttgctgtacattctgaaatataagcagtaccatcagaagtccccg 21035 Query: 191 cagtacgaccagattctgaagaaaaatgagcagatgtatgcgctgctggcaatttgccta 250 ||||| |||||||| ||||||||||||| ||||||||||| | ||||| ||||||| Sbjct: 21034 cagtatgaccagatcttgaagaaaaatgaacagatgtatgccttcttggcagtttgcctt 20975 Query: 251 tctctgtgtccgcaaaacaaactcatagatgaaaatgttagcacccagctgaaagaaaag 310 || | || ||||| |||| ||||| ||||| ||||||||||||||||||||||||||| Sbjct: 20974 tccttatgcccgcagcacaacctcattgatgagaatgttagcacccagctgaaagaaaag 20915 Query: 311 tacaatgacaaaatgacaaanatgcagaggtttgatgatgaagcatatgctgcctatgat 370 || ||||||||||||||||| ||||||||||||||||| ||| | |||||||| |||||| Sbjct: 20914 tataatgacaaaatgacaaagatgcagaggtttgatgaggaaacctatgctgcgtatgat 20855 Query: 371 gagctattttcgtacgcctgccccaagtttattactccatcacctccagttctggaccag 430 || || ||||| ||||| ||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 20854 gaactgttttcatacgcatgccccaagtttattactccatcacctccagccctggatcag 20795 Query: 431 ccacttacaaattataaccagg 452 |||||||||||||||||||||| Sbjct: 20794 ccacttacaaattataaccagg 20773 Score = 115 bits (58), Expect = 1e-22 Identities = 100/113 (88%), Gaps = 1/113 (0%) Strand = Plus / Minus Query: 3 aagtgcttggcaccgattaaccttaacn-gcagggggtctacaccattgtcattgggagt 61 |||||||||||||| || |||||||| ||||||||||||||||||||| ||||||||| Sbjct: 21516 aagtgcttggcaccaatcgaccttaaccagcagggggtctacaccattgtgattgggagt 21457 Query: 62 cacatctcgacgatctatcattatggatttgcaaaccttatgatgcgcaggta 114 |||||||| | ||||| || ||||| |||||||| ||||||||||||||||| Sbjct: 21456 cacatctctgctatctaccactatggctttgcaaatcttatgatgcgcaggta 21404
>dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0452F10 Length = 145120 Score = 315 bits (159), Expect = 7e-83 Identities = 281/322 (87%) Strand = Plus / Minus Query: 131 gaattcaacaaaattctgctttatattataaagtataagcagtaccatcagaaatcccct 190 |||||||||||||| |||| || ||| | || |||||||||||||||||||| ||||| Sbjct: 114026 gaattcaacaaaatcttgctgtacattctgaaatataagcagtaccatcagaagtccccg 113967 Query: 191 cagtacgaccagattctgaagaaaaatgagcagatgtatgcgctgctggcaatttgccta 250 ||||| |||||||| ||||||||||||| ||||||||||| | ||||| ||||||| Sbjct: 113966 cagtatgaccagatcttgaagaaaaatgaacagatgtatgccttcttggcagtttgcctt 113907 Query: 251 tctctgtgtccgcaaaacaaactcatagatgaaaatgttagcacccagctgaaagaaaag 310 || | || ||||| |||| ||||| ||||| ||||||||||||||||||||||||||| Sbjct: 113906 tccttatgcccgcagcacaacctcattgatgagaatgttagcacccagctgaaagaaaag 113847 Query: 311 tacaatgacaaaatgacaaanatgcagaggtttgatgatgaagcatatgctgcctatgat 370 || ||||||||||||||||| ||||||||||||||||| ||| | |||||||| |||||| Sbjct: 113846 tataatgacaaaatgacaaagatgcagaggtttgatgaggaaacctatgctgcgtatgat 113787 Query: 371 gagctattttcgtacgcctgccccaagtttattactccatcacctccagttctggaccag 430 || || ||||| ||||| ||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 113786 gaactgttttcatacgcatgccccaagtttattactccatcacctccagccctggatcag 113727 Query: 431 ccacttacaaattataaccagg 452 |||||||||||||||||||||| Sbjct: 113726 ccacttacaaattataaccagg 113705 Score = 115 bits (58), Expect = 1e-22 Identities = 100/113 (88%), Gaps = 1/113 (0%) Strand = Plus / Minus Query: 3 aagtgcttggcaccgattaaccttaacn-gcagggggtctacaccattgtcattgggagt 61 |||||||||||||| || |||||||| ||||||||||||||||||||| ||||||||| Sbjct: 114448 aagtgcttggcaccaatcgaccttaaccagcagggggtctacaccattgtgattgggagt 114389 Query: 62 cacatctcgacgatctatcattatggatttgcaaaccttatgatgcgcaggta 114 |||||||| | ||||| || ||||| |||||||| ||||||||||||||||| Sbjct: 114388 cacatctctgctatctaccactatggctttgcaaatcttatgatgcgcaggta 114336
>dbj|AK104688.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-F08, full insert sequence Length = 1242 Score = 218 bits (110), Expect = 1e-53 Identities = 322/393 (81%) Strand = Plus / Plus Query: 31 gcagggggtctacaccattgtcattgggagtcacatctcgacgatctatcattatggatt 90 |||||| |||||||||| ||| ||||| || ||||| || || || ||||| ||||| || Sbjct: 245 gcagggtgtctacaccactgtgattggaagccacatttccactatttatcactatgggtt 304 Query: 91 tgcaaaccttatgatgcgcaggtatgttgatgctaccaaggaattcaacaaaattctgct 150 ||| | ||| ||||||||||||||| |||||| || |||||||||||||||||| | Sbjct: 305 tgccagcctcatgatgcgcaggtatattgatggtatacgtgaattcaacaaaattctgtt 364 Query: 151 ttatattataaagtataagcagtaccatcagaaatcccctcagtacgaccagattctgaa 210 ||||| | |||| |||||| ||||| ||||| ||||| ||||| |||||| | || || Sbjct: 365 gtatatcctgaagtgtaagcaataccaccagaattccccccagtatgaccagctacttaa 424 Query: 211 gaaaaatgagcagatgtatgcgctgctggcaatttgcctatctctgtgtccgcaaaacaa 270 ||| ||||||||||||||||| || |||| || ||||| || ||||||| || |||| Sbjct: 425 gaagaatgagcagatgtatgcactattggcgatctgcctctcattgtgtccacaggacaa 484 Query: 271 actcatagatgaaaatgttagcacccagctgaaagaaaagtacaatgacaaaatgacaaa 330 |||||||||||||| ||| |||| |||||||| |||||||| |||||||||||||| Sbjct: 485 gctcatagatgaaaacgttggcactcagctgaaggaaaagtatggggacaaaatgacaaa 544 Query: 331 natgcagaggtttgatgatgaagcatatgctgcctatgatgagctattttcgtacgcctg 390 ||||| |||| ||||||||| ||||||||| |||||||| || ||||| || ||||| Sbjct: 545 gatgcataggtatgatgatgaggcatatgctatttatgatgaactcttttcctatgcctg 604 Query: 391 ccccaagtttattactccatcacctccagttct 423 ||||||||| |||||| | || ||||||||||| Sbjct: 605 ccccaagttcattactgcgtcgcctccagttct 637
>dbj|AK068760.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160I02, full insert sequence Length = 1948 Score = 218 bits (110), Expect = 1e-53 Identities = 322/393 (81%) Strand = Plus / Plus Query: 31 gcagggggtctacaccattgtcattgggagtcacatctcgacgatctatcattatggatt 90 |||||| |||||||||| ||| ||||| || ||||| || || || ||||| ||||| || Sbjct: 813 gcagggtgtctacaccactgtgattggaagccacatttccactatttatcactatgggtt 872 Query: 91 tgcaaaccttatgatgcgcaggtatgttgatgctaccaaggaattcaacaaaattctgct 150 ||| | ||| ||||||||||||||| |||||| || |||||||||||||||||| | Sbjct: 873 tgccagcctcatgatgcgcaggtatattgatggtatacgtgaattcaacaaaattctgtt 932 Query: 151 ttatattataaagtataagcagtaccatcagaaatcccctcagtacgaccagattctgaa 210 ||||| | |||| |||||| ||||| ||||| ||||| ||||| |||||| | || || Sbjct: 933 gtatatcctgaagtgtaagcaataccaccagaattccccccagtatgaccagctacttaa 992 Query: 211 gaaaaatgagcagatgtatgcgctgctggcaatttgcctatctctgtgtccgcaaaacaa 270 ||| ||||||||||||||||| || |||| || ||||| || ||||||| || |||| Sbjct: 993 gaagaatgagcagatgtatgcactattggcgatctgcctctcattgtgtccacaggacaa 1052 Query: 271 actcatagatgaaaatgttagcacccagctgaaagaaaagtacaatgacaaaatgacaaa 330 |||||||||||||| ||| |||| |||||||| |||||||| |||||||||||||| Sbjct: 1053 gctcatagatgaaaacgttggcactcagctgaaggaaaagtatggggacaaaatgacaaa 1112 Query: 331 natgcagaggtttgatgatgaagcatatgctgcctatgatgagctattttcgtacgcctg 390 ||||| |||| ||||||||| ||||||||| |||||||| || ||||| || ||||| Sbjct: 1113 gatgcataggtatgatgatgaggcatatgctatttatgatgaactcttttcctatgcctg 1172 Query: 391 ccccaagtttattactccatcacctccagttct 423 ||||||||| |||||| | || ||||||||||| Sbjct: 1173 ccccaagttcattactgcgtcgcctccagttct 1205
>dbj|AK067567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108C14, full insert sequence Length = 1950 Score = 218 bits (110), Expect = 1e-53 Identities = 322/393 (81%) Strand = Plus / Plus Query: 31 gcagggggtctacaccattgtcattgggagtcacatctcgacgatctatcattatggatt 90 |||||| |||||||||| ||| ||||| || ||||| || || || ||||| ||||| || Sbjct: 858 gcagggtgtctacaccactgtgattggaagccacatttccactatttatcactatgggtt 917 Query: 91 tgcaaaccttatgatgcgcaggtatgttgatgctaccaaggaattcaacaaaattctgct 150 ||| | ||| ||||||||||||||| |||||| || |||||||||||||||||| | Sbjct: 918 tgccagcctcatgatgcgcaggtatattgatggtatacgtgaattcaacaaaattctgtt 977 Query: 151 ttatattataaagtataagcagtaccatcagaaatcccctcagtacgaccagattctgaa 210 ||||| | |||| |||||| ||||| ||||| ||||| ||||| |||||| | || || Sbjct: 978 gtatatcctgaagtgtaagcaataccaccagaattccccccagtatgaccagctacttaa 1037 Query: 211 gaaaaatgagcagatgtatgcgctgctggcaatttgcctatctctgtgtccgcaaaacaa 270 ||| ||||||||||||||||| || |||| || ||||| || ||||||| || |||| Sbjct: 1038 gaagaatgagcagatgtatgcactattggcgatctgcctctcattgtgtccacaggacaa 1097 Query: 271 actcatagatgaaaatgttagcacccagctgaaagaaaagtacaatgacaaaatgacaaa 330 |||||||||||||| ||| |||| |||||||| |||||||| |||||||||||||| Sbjct: 1098 gctcatagatgaaaacgttggcactcagctgaaggaaaagtatggggacaaaatgacaaa 1157 Query: 331 natgcagaggtttgatgatgaagcatatgctgcctatgatgagctattttcgtacgcctg 390 ||||| |||| ||||||||| ||||||||| |||||||| || ||||| || ||||| Sbjct: 1158 gatgcataggtatgatgatgaggcatatgctatttatgatgaactcttttcctatgcctg 1217 Query: 391 ccccaagtttattactccatcacctccagttct 423 ||||||||| |||||| | || ||||||||||| Sbjct: 1218 ccccaagttcattactgcgtcgcctccagttct 1250
>gb|AC104275.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_C10, complete sequence Length = 138209 Score = 186 bits (94), Expect = 4e-44 Identities = 243/293 (82%) Strand = Plus / Minus Query: 131 gaattcaacaaaattctgctttatattataaagtataagcagtaccatcagaaatcccct 190 |||||||||||||||||| | ||||| | |||| |||||| ||||| ||||| ||||| Sbjct: 101240 gaattcaacaaaattctgttgtatatcctgaagtgtaagcaataccaccagaattccccc 101181 Query: 191 cagtacgaccagattctgaagaaaaatgagcagatgtatgcgctgctggcaatttgccta 250 ||||| |||||| | || ||||| ||||||||||||||||| || |||| || ||||| Sbjct: 101180 cagtatgaccagctacttaagaagaatgagcagatgtatgcactattggcgatctgcctc 101121 Query: 251 tctctgtgtccgcaaaacaaactcatagatgaaaatgttagcacccagctgaaagaaaag 310 || ||||||| || |||| |||||||||||||| ||| |||| |||||||| |||||| Sbjct: 101120 tcattgtgtccacaggacaagctcatagatgaaaacgttggcactcagctgaaggaaaag 101061 Query: 311 tacaatgacaaaatgacaaanatgcagaggtttgatgatgaagcatatgctgcctatgat 370 || |||||||||||||| ||||| |||| ||||||||| ||||||||| |||||| Sbjct: 101060 tatggggacaaaatgacaaagatgcataggtatgatgatgaggcatatgctatttatgat 101001 Query: 371 gagctattttcgtacgcctgccccaagtttattactccatcacctccagttct 423 || || ||||| || |||||||||||||| |||||| | || ||||||||||| Sbjct: 101000 gaactcttttcctatgcctgccccaagttcattactgcgtcgcctccagttct 100948 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 31 gcagggggtctacaccattgtcattgggagtcacatctcgacgatctatcattatggatt 90 |||||| |||||||||| ||| ||||| || ||||| || || || ||||| ||||| || Sbjct: 102892 gcagggtgtctacaccactgtgattggaagccacatttccactatttatcactatgggtt 102833 Query: 91 tgcaaaccttatgatgcgcaggtatg 116 ||| | ||| |||||||||||||||| Sbjct: 102832 tgccagcctcatgatgcgcaggtatg 102807
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 186 bits (94), Expect = 4e-44 Identities = 243/293 (82%) Strand = Plus / Minus Query: 131 gaattcaacaaaattctgctttatattataaagtataagcagtaccatcagaaatcccct 190 |||||||||||||||||| | ||||| | |||| |||||| ||||| ||||| ||||| Sbjct: 7664845 gaattcaacaaaattctgttgtatatcctgaagtgtaagcaataccaccagaattccccc 7664786 Query: 191 cagtacgaccagattctgaagaaaaatgagcagatgtatgcgctgctggcaatttgccta 250 ||||| |||||| | || ||||| ||||||||||||||||| || |||| || ||||| Sbjct: 7664785 cagtatgaccagctacttaagaagaatgagcagatgtatgcactattggcgatctgcctc 7664726 Query: 251 tctctgtgtccgcaaaacaaactcatagatgaaaatgttagcacccagctgaaagaaaag 310 || ||||||| || |||| |||||||||||||| ||| |||| |||||||| |||||| Sbjct: 7664725 tcattgtgtccacaggacaagctcatagatgaaaacgttggcactcagctgaaggaaaag 7664666 Query: 311 tacaatgacaaaatgacaaanatgcagaggtttgatgatgaagcatatgctgcctatgat 370 || |||||||||||||| ||||| |||| ||||||||| ||||||||| |||||| Sbjct: 7664665 tatggggacaaaatgacaaagatgcataggtatgatgatgaggcatatgctatttatgat 7664606 Query: 371 gagctattttcgtacgcctgccccaagtttattactccatcacctccagttct 423 || || ||||| || |||||||||||||| |||||| | || ||||||||||| Sbjct: 7664605 gaactcttttcctatgcctgccccaagttcattactgcgtcgcctccagttct 7664553 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 31 gcagggggtctacaccattgtcattgggagtcacatctcgacgatctatcattatggatt 90 |||||| |||||||||| ||| ||||| || ||||| || || || ||||| ||||| || Sbjct: 7666497 gcagggtgtctacaccactgtgattggaagccacatttccactatttatcactatgggtt 7666438 Query: 91 tgcaaaccttatgatgcgcaggtatg 116 ||| | ||| |||||||||||||||| Sbjct: 7666437 tgccagcctcatgatgcgcaggtatg 7666412
>dbj|AK061285.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-G09, full insert sequence Length = 1159 Score = 115 bits (58), Expect = 1e-22 Identities = 100/113 (88%), Gaps = 1/113 (0%) Strand = Plus / Plus Query: 3 aagtgcttggcaccgattaaccttaacn-gcagggggtctacaccattgtcattgggagt 61 |||||||||||||| || |||||||| ||||||||||||||||||||| ||||||||| Sbjct: 796 aagtgcttggcaccaatcgaccttaaccagcagggggtctacaccattgtgattgggagt 855 Query: 62 cacatctcgacgatctatcattatggatttgcaaaccttatgatgcgcaggta 114 |||||||| | ||||| || ||||| |||||||| ||||||||||||||||| Sbjct: 856 cacatctctgctatctaccactatggctttgcaaatcttatgatgcgcaggta 908
>ref|NM_147917.2| Arabidopsis thaliana unknown protein AT5G25754 mRNA, complete cds Length = 1869 Score = 63.9 bits (32), Expect = 4e-07 Identities = 149/188 (79%) Strand = Plus / Plus Query: 41 tacaccattgtcattgggagtcacatctcgacgatctatcattatggatttgcaaacctt 100 ||||||| ||||||||| | || ||| | || ||||| || ||||||||||| | |||| Sbjct: 817 tacaccagtgtcattggttgccatatcgctactatctaccactatggatttgccaccctt 876 Query: 101 atgatgcgcaggtatgttgatgctaccaaggaattcaacaaaattctgctttatattata 160 ||| |||| |||||||| |||||| || |||||||| ||||| || || ||| | Sbjct: 877 atgttgcggaggtatgtcgatgctgttcgtgagttcaacaagattctcctctacattttc 936 Query: 161 aagtataagcagtaccatcagaaatcccctcagtacgaccagattctgaagaaaaatgag 220 ||| ||||||||||||||| || || ||||||||||| || | || ||||| |||||| Sbjct: 937 aagactaagcagtaccatcaaaagtcacctcagtacgagcaattactcaagaagaatgag 996 Query: 221 cagatgta 228 |||||||| Sbjct: 997 cagatgta 1004 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 365 tatgatgagctattttcgtacgcctgccccaagtttat 402 ||||||||||| || || ||||| |||||||||||||| Sbjct: 1141 tatgatgagctcttctcttacgcatgccccaagtttat 1178
>ref|NM_147918.2| Arabidopsis thaliana unknown protein AT5G25757 mRNA, complete cds Length = 1812 Score = 63.9 bits (32), Expect = 4e-07 Identities = 149/188 (79%) Strand = Plus / Plus Query: 41 tacaccattgtcattgggagtcacatctcgacgatctatcattatggatttgcaaacctt 100 ||||||| ||||||||| | || ||| | || ||||| || ||||||||||| | |||| Sbjct: 772 tacaccagtgtcattggttgccatatcgctactatctaccactatggatttgccaccctt 831 Query: 101 atgatgcgcaggtatgttgatgctaccaaggaattcaacaaaattctgctttatattata 160 ||| |||| |||||||| |||||| || |||||||| ||||| || || ||| | Sbjct: 832 atgttgcggaggtatgtcgatgctgttcgtgagttcaacaagattctcctctacattttc 891 Query: 161 aagtataagcagtaccatcagaaatcccctcagtacgaccagattctgaagaaaaatgag 220 ||| ||||||||||||||| || || ||||||||||| || | || ||||| |||||| Sbjct: 892 aagactaagcagtaccatcaaaagtcacctcagtacgagcaattactcaagaagaatgag 951 Query: 221 cagatgta 228 |||||||| Sbjct: 952 cagatgta 959 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 365 tatgatgagctattttcgtacgcctgccccaagtttat 402 ||||||||||| || || ||||| |||||||||||||| Sbjct: 1096 tatgatgagctcttctcttacgcatgccccaagtttat 1133
>gb|BT000769.1| Arabidopsis thaliana clone RAFL09-16-C23 (R09389) unknown protein (At5g25754) mRNA, complete cds Length = 1886 Score = 63.9 bits (32), Expect = 4e-07 Identities = 149/188 (79%) Strand = Plus / Plus Query: 41 tacaccattgtcattgggagtcacatctcgacgatctatcattatggatttgcaaacctt 100 ||||||| ||||||||| | || ||| | || ||||| || ||||||||||| | |||| Sbjct: 817 tacaccagtgtcattggttgccatatcgctactatctaccactatggatttgccaccctt 876 Query: 101 atgatgcgcaggtatgttgatgctaccaaggaattcaacaaaattctgctttatattata 160 ||| |||| |||||||| |||||| || |||||||| ||||| || || ||| | Sbjct: 877 atgttgcggaggtatgtcgatgctgttcgtgagttcaacaagattctcctctacattttc 936 Query: 161 aagtataagcagtaccatcagaaatcccctcagtacgaccagattctgaagaaaaatgag 220 ||| ||||||||||||||| || || ||||||||||| || | || ||||| |||||| Sbjct: 937 aagactaagcagtaccatcaaaagtcacctcagtacgagcaattactcaagaagaatgag 996 Query: 221 cagatgta 228 |||||||| Sbjct: 997 cagatgta 1004 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 365 tatgatgagctattttcgtacgcctgccccaagtttat 402 ||||||||||| || || ||||| |||||||||||||| Sbjct: 1141 tatgatgagctcttctcttacgcatgccccaagtttat 1178
>dbj|AK221761.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL21-60-I04 Length = 1816 Score = 63.9 bits (32), Expect = 4e-07 Identities = 149/188 (79%) Strand = Plus / Plus Query: 41 tacaccattgtcattgggagtcacatctcgacgatctatcattatggatttgcaaacctt 100 ||||||| ||||||||| | || ||| | || ||||| || ||||||||||| | |||| Sbjct: 885 tacaccagtgtcattggttgccatatcgctactatctaccactatggatttgccaccctt 944 Query: 101 atgatgcgcaggtatgttgatgctaccaaggaattcaacaaaattctgctttatattata 160 ||| |||| ||||||| |||||| || |||||||| ||||| || |||||| | Sbjct: 945 atgttgcgggggtatgtcgatgctgttcgtgagttcaacaagattctcctctatattttc 1004 Query: 161 aagtataagcagtaccatcagaaatcccctcagtacgaccagattctgaagaaaaatgag 220 ||| ||||||||||||||| || || ||||||||||| || | || ||||| |||||| Sbjct: 1005 aagactaagcagtaccatcaaaagtcacctcagtacgagcaattactcaagaagaatgag 1064 Query: 221 cagatgta 228 |||||||| Sbjct: 1065 cagatgta 1072 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 365 tatgatgagctattttcgtacgcctgccccaagtttat 402 ||||||||||| || || ||||| |||||||||||||| Sbjct: 1209 tatgatgagctcttctcttacgcatgccccaagtttat 1246
>gb|AC084432.3| Genomic sequence for Arabidopsis thaliana, clone T5I5, from chromosome V, complete sequence Length = 18198 Score = 63.9 bits (32), Expect = 4e-07 Identities = 149/188 (79%) Strand = Plus / Minus Query: 41 tacaccattgtcattgggagtcacatctcgacgatctatcattatggatttgcaaacctt 100 ||||||| ||||||||| | || ||| | || ||||| || ||||||||||| | |||| Sbjct: 15665 tacaccagtgtcattggttgccatatcgctactatctaccactatggatttgccaccctt 15606 Query: 101 atgatgcgcaggtatgttgatgctaccaaggaattcaacaaaattctgctttatattata 160 ||| |||| |||||||| |||||| || |||||||| ||||| || || ||| | Sbjct: 15605 atgttgcggaggtatgtcgatgctgttcgtgagttcaacaagattctcctctacattttc 15546 Query: 161 aagtataagcagtaccatcagaaatcccctcagtacgaccagattctgaagaaaaatgag 220 ||| ||||||||||||||| || || ||||||||||| || | || ||||| |||||| Sbjct: 15545 aagactaagcagtaccatcaaaagtcacctcagtacgagcaattactcaagaagaatgag 15486 Query: 221 cagatgta 228 |||||||| Sbjct: 15485 cagatgta 15478 Score = 63.9 bits (32), Expect = 4e-07 Identities = 149/188 (79%) Strand = Plus / Plus Query: 41 tacaccattgtcattgggagtcacatctcgacgatctatcattatggatttgcaaacctt 100 ||||||| ||||||||| | || ||| | || ||||| || ||||||||||| | |||| Sbjct: 3573 tacaccagtgtcattggttgccatatcgctactatctaccactatggatttgccaccctt 3632 Query: 101 atgatgcgcaggtatgttgatgctaccaaggaattcaacaaaattctgctttatattata 160 ||| |||| |||||||| |||||| || |||||||| ||||| || || ||| | Sbjct: 3633 atgttgcggaggtatgtcgatgctgttcgtgagttcaacaagattctcctctacattttc 3692 Query: 161 aagtataagcagtaccatcagaaatcccctcagtacgaccagattctgaagaaaaatgag 220 ||| ||||||||||||||| || || ||||||||||| || | || ||||| |||||| Sbjct: 3693 aagactaagcagtaccatcaaaagtcacctcagtacgagcaattactcaagaagaatgag 3752 Query: 221 cagatgta 228 |||||||| Sbjct: 3753 cagatgta 3760 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Minus Query: 365 tatgatgagctattttcgtacgcctgccccaagtttat 402 ||||||||||| || || ||||| |||||||||||||| Sbjct: 15341 tatgatgagctcttctcttacgcatgccccaagtttat 15304 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 365 tatgatgagctattttcgtacgcctgccccaagtttat 402 ||||||||||| || || ||||| |||||||||||||| Sbjct: 3897 tatgatgagctcttctcttacgcatgccccaagtttat 3934
>gb|AF109359.1| Homo sapiens MSTP005 mRNA, complete cds Length = 1912 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1105 aatgagcagatgcatgcgctgctggc 1130
>gb|BC007510.2| Homo sapiens eukaryotic translation initiation factor 3, subunit 6 interacting protein, mRNA (cDNA clone MGC:4223 IMAGE:2959747), complete cds Length = 1896 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1106 aatgagcagatgcatgcgctgctggc 1131
>gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete sequence Length = 132981 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 89 tttgcaaaccttatgatgcgcaggta 114 |||||||| ||||||||||||||||| Sbjct: 95784 tttgcaaatcttatgatgcgcaggta 95759
>gb|BC029265.1| Homo sapiens eukaryotic translation initiation factor 3, subunit 6 interacting protein, mRNA (cDNA clone MGC:34917 IMAGE:5110941), complete cds Length = 1905 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1108 aatgagcagatgcatgcgctgctggc 1133
>gb|BC001101.2| Homo sapiens eukaryotic translation initiation factor 3, subunit 6 interacting protein, mRNA (cDNA clone MGC:735 IMAGE:3507964), complete cds Length = 1918 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1106 aatgagcagatgcatgcgctgctggc 1131
>gb|AC163608.2| Mus musculus chromosome 1, clone RP24-185M14, complete sequence Length = 161555 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 140 aaaattctgctttatattataaagta 165 |||||||||||||| ||||||||||| Sbjct: 116478 aaaattctgctttacattataaagta 116453
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 89 tttgcaaaccttatgatgcgcaggta 114 |||||||| ||||||||||||||||| Sbjct: 18190799 tttgcaaatcttatgatgcgcaggta 18190774
>gb|BC001814.1| Homo sapiens eukaryotic translation initiation factor 3, subunit 6 interacting protein, mRNA (cDNA clone IMAGE:2960916), **** WARNING: chimeric clone **** Length = 2354 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1555 aatgagcagatgcatgcgctgctggc 1580
>gb|AC101994.3| Mus musculus chromosome 1, clone RP24-406F14, complete sequence Length = 164170 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 140 aaaattctgctttatattataaagta 165 |||||||||||||| ||||||||||| Sbjct: 153493 aaaattctgctttacattataaagta 153468
>ref|NM_016091.2| Homo sapiens eukaryotic translation initiation factor 3, subunit 6 interacting protein (EIF3S6IP), mRNA Length = 1970 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1177 aatgagcagatgcatgcgctgctggc 1202
>emb|AL022311.5|HS1014D13 Human DNA sequence from clone RP5-1014D13 on chromosome 22q13.1-13.2, complete sequence Length = 71263 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 6127 aatgagcagatgcatgcgctgctggc 6152
>emb|CR615648.1| full-length cDNA clone CS0DG003YC03 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1846 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1105 aatgagcagatgcatgcgctgctggc 1130
>emb|CR626782.1| full-length cDNA clone CS0DI049YM18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1862 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1090 aatgagcagatgcatgcgctgctggc 1115
>emb|CR621358.1| full-length cDNA clone CS0DF012YO11 of Fetal brain of Homo sapiens (human) Length = 1890 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1120 aatgagcagatgcatgcgctgctggc 1145
>emb|CR619933.1| full-length cDNA clone CS0DI013YM24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1859 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1119 aatgagcagatgcatgcgctgctggc 1144
>emb|CR619704.1| full-length cDNA clone CS0DI066YB23 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1889 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1119 aatgagcagatgcatgcgctgctggc 1144
>emb|CR618554.1| full-length cDNA clone CS0DI032YH04 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1853 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1113 aatgagcagatgcatgcgctgctggc 1138
>emb|CR617210.1| full-length cDNA clone CS0DI084YH12 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1708 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1119 aatgagcagatgcatgcgctgctggc 1144
>emb|CR614773.1| full-length cDNA clone CS0DI069YD14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1216 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 498 aatgagcagatgcatgcgctgctggc 523
>emb|CR613765.1| full-length cDNA clone CS0DK004YG14 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1859 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1118 aatgagcagatgcatgcgctgctggc 1143
>emb|CR613610.1| full-length cDNA clone CL0BB002ZD01 of Neuroblastoma of Homo sapiens (human) Length = 1489 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 716 aatgagcagatgcatgcgctgctggc 741
>emb|CR612723.1| full-length cDNA clone CS0DI019YO24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1854 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1120 aatgagcagatgcatgcgctgctggc 1145
>emb|CR609964.1| full-length cDNA clone CS0DI001YF10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1862 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1120 aatgagcagatgcatgcgctgctggc 1145
>dbj|AK093540.1| Homo sapiens cDNA FLJ36221 fis, clone THYMU2000950 Length = 2283 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1512 aatgagcagatgcatgcgctgctggc 1537
>emb|CR608959.1| full-length cDNA clone CS0DG001YD22 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1877 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1107 aatgagcagatgcatgcgctgctggc 1132
>emb|CR607712.1| full-length cDNA clone CL0BB002ZF12 of Neuroblastoma of Homo sapiens (human) Length = 1874 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1119 aatgagcagatgcatgcgctgctggc 1144
>emb|CR607282.1| full-length cDNA clone CS0DI012YH04 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1890 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1120 aatgagcagatgcatgcgctgctggc 1145
>emb|CR606800.1| full-length cDNA clone CL0BB005ZA11 of Neuroblastoma of Homo sapiens (human) Length = 1885 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1113 aatgagcagatgcatgcgctgctggc 1138
>emb|CR606748.1| full-length cDNA clone CS0DH005YP12 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1882 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1113 aatgagcagatgcatgcgctgctggc 1138
>emb|CR604937.1| full-length cDNA clone CS0DF038YH09 of Fetal brain of Homo sapiens (human) Length = 1868 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1120 aatgagcagatgcatgcgctgctggc 1145
>emb|CR603334.1| full-length cDNA clone CS0DF007YN05 of Fetal brain of Homo sapiens (human) Length = 1863 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1120 aatgagcagatgcatgcgctgctggc 1145
>emb|CR603239.1| full-length cDNA clone CS0DI033YP09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1838 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1120 aatgagcagatgcatgcgctgctggc 1145
>emb|CR602615.1| full-length cDNA clone CS0DI015YF19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1835 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1113 aatgagcagatgcatgcgctgctggc 1138
>emb|CR602486.1| full-length cDNA clone CS0DH007YE09 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1862 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1093 aatgagcagatgcatgcgctgctggc 1118
>emb|CR598540.1| full-length cDNA clone CS0DI043YC09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1518 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 799 aatgagcagatgcatgcgctgctggc 824
>emb|CR597768.1| full-length cDNA clone CS0DF035YF18 of Fetal brain of Homo sapiens (human) Length = 1886 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1120 aatgagcagatgcatgcgctgctggc 1145
>emb|CR597571.1| full-length cDNA clone CS0DL009YD22 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1845 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1107 aatgagcagatgcatgcgctgctggc 1132
>emb|CR596649.1| full-length cDNA clone CS0DI062YI01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1861 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1120 aatgagcagatgcatgcgctgctggc 1145
>dbj|AK056129.1| Homo sapiens cDNA FLJ31567 fis, clone NT2RI2001540, weakly similar to Alcohol dehydrogenase/ribitol dehydrogenase Length = 2441 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1672 aatgagcagatgcatgcgctgctggc 1697
>emb|CR596392.1| full-length cDNA clone CS0DI021YJ23 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1857 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1107 aatgagcagatgcatgcgctgctggc 1132
>emb|CR596123.1| full-length cDNA clone CS0DI009YM21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1847 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1107 aatgagcagatgcatgcgctgctggc 1132
>emb|CR595838.1| full-length cDNA clone CS0DI019YA14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1862 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1120 aatgagcagatgcatgcgctgctggc 1145
>emb|CR595777.1| full-length cDNA clone CS0CAP006YB02 of Thymus of Homo sapiens (human) Length = 1337 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 585 aatgagcagatgcatgcgctgctggc 610
>emb|CR594953.1| full-length cDNA clone CS0DA012YJ19 of Neuroblastoma of Homo sapiens (human) Length = 1856 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1107 aatgagcagatgcatgcgctgctggc 1132
>emb|CR594887.1| full-length cDNA clone CS0DI008YI01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1797 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1062 aatgagcagatgcatgcgctgctggc 1087
>emb|CR594883.1| full-length cDNA clone CS0DE014YP13 of Placenta of Homo sapiens (human) Length = 1889 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1119 aatgagcagatgcatgcgctgctggc 1144
>dbj|AK027429.1| Homo sapiens cDNA FLJ14523 fis, clone NT2RM1000905, highly similar to Homo sapiens HSPC021 mRNA Length = 1529 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 758 aatgagcagatgcatgcgctgctggc 783
>emb|CR593580.1| full-length cDNA clone CS0DI014YJ07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1849 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1113 aatgagcagatgcatgcgctgctggc 1138
>emb|CR593536.1| full-length cDNA clone CS0DI023YJ22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1803 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1062 aatgagcagatgcatgcgctgctggc 1087
>emb|CR593242.1| full-length cDNA clone CS0DG003YG16 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1828 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1107 aatgagcagatgcatgcgctgctggc 1132
>emb|CR591951.1| full-length cDNA clone CS0DE011YB04 of Placenta of Homo sapiens (human) Length = 1863 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1113 aatgagcagatgcatgcgctgctggc 1138
>emb|CR590077.1| full-length cDNA clone CL0BA006ZF04 of Placenta of Homo sapiens (human) Length = 1294 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 522 aatgagcagatgcatgcgctgctggc 547
>gb|AF083243.1|HSPC025 Homo sapiens HSPC025 mRNA, complete cds Length = 1901 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1123 aatgagcagatgcatgcgctgctggc 1148
>gb|AF077207.1|AF077207 Homo sapiens HSPC021 mRNA, complete cds Length = 1897 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1104 aatgagcagatgcatgcgctgctggc 1129
>emb|BX649257.8| Zebrafish DNA sequence from clone CH211-197L9 in linkage group 23, complete sequence Length = 182686 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 142 aattctgctttatattataaag 163 |||||||||||||||||||||| Sbjct: 162285 aattctgctttatattataaag 162306
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 89 tttgcaaaccttatgatgcgcaggta 114 |||||||| ||||||||||||||||| Sbjct: 18184340 tttgcaaatcttatgatgcgcaggta 18184315
>dbj|AK222529.1| Homo sapiens mRNA for eukaryotic translation initiation factor 3 subunit 6 interacting protein variant, clone: adSE01547 Length = 1909 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1121 aatgagcagatgcatgcgctgctggc 1146
>dbj|AK222496.1| Homo sapiens mRNA for eukaryotic translation initiation factor 3 subunit 6 interacting protein variant, clone: adSE00183 Length = 1925 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1123 aatgagcagatgcatgcgctgctggc 1148
>dbj|AK098713.1| Homo sapiens cDNA FLJ25847 fis, clone TST08852 Length = 1368 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 595 aatgagcagatgcatgcgctgctggc 620
>dbj|AK098457.1| Homo sapiens cDNA FLJ25591 fis, clone JTH12226 Length = 1459 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 688 aatgagcagatgcatgcgctgctggc 713
>dbj|AK129648.1| Homo sapiens cDNA FLJ26137 fis, clone TMS04609 Length = 1892 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1123 aatgagcagatgcatgcgctgctggc 1148
>emb|CR456436.1| Homo sapiens dJ1014D13.1 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.dJ1014D13.1) Length = 1933 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 215 aatgagcagatgtatgcgctgctggc 240 |||||||||||| ||||||||||||| Sbjct: 1229 aatgagcagatgcatgcgctgctggc 1254
>gb|AC146204.3| Pan troglodytes BAC clone RP43-25M3 from 7, complete sequence Length = 188265 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 ccagattctgaagaaaaatga 219 ||||||||||||||||||||| Sbjct: 45557 ccagattctgaagaaaaatga 45537
>gb|AC146272.3| Pan troglodytes BAC clone RP43-29H6 from 7, complete sequence Length = 149408 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 422 ctggaccagccacttacaaat 442 ||||||||||||||||||||| Sbjct: 115647 ctggaccagccacttacaaat 115667
>gb|AC116470.12| Mus musculus chromosome 16, clone RP23-383N18, complete sequence Length = 194593 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 agaaaaatgagcagatgtatg 230 ||||||||||||||||||||| Sbjct: 29615 agaaaaatgagcagatgtatg 29635
>gb|AC121975.3| Mus musculus BAC clone RP24-286J21 from chromosome 8, complete sequence Length = 174928 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 aatttgcctatctctgtgtcc 261 ||||||||||||||||||||| Sbjct: 75853 aatttgcctatctctgtgtcc 75833
>gb|AC122233.4| Mus musculus BAC clone RP23-137D14 from 16, complete sequence Length = 203964 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 agaaaaatgagcagatgtatg 230 ||||||||||||||||||||| Sbjct: 16032 agaaaaatgagcagatgtatg 16012
>gb|AC104089.4| Homo sapiens BAC clone RP11-758A8 from 7, complete sequence Length = 8854 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 ccagattctgaagaaaaatga 219 ||||||||||||||||||||| Sbjct: 1468 ccagattctgaagaaaaatga 1488
>gb|AC142352.1| Pan troglodytes BAC clone RP43-21K18 from 7, complete sequence Length = 171165 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 422 ctggaccagccacttacaaat 442 ||||||||||||||||||||| Sbjct: 138082 ctggaccagccacttacaaat 138102
>gb|AC135396.32| Medicago truncatula clone mth2-33o18, complete sequence Length = 132211 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 302 aaagaaaagtacaatgacaaaatga 326 |||||||||||||||||||| |||| Sbjct: 125663 aaagaaaagtacaatgacaacatga 125639
>emb|AL031745.8|PFMAL1P2 Plasmodium falciparum DNA from MAL1P2 Length = 384550 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 144 ttctgctttatattataaagtataa 168 |||||| |||||||||||||||||| Sbjct: 370044 ttctgccttatattataaagtataa 370068
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 aaattctgctttatattataa 161 ||||||||||||||||||||| Sbjct: 5620776 aaattctgctttatattataa 5620796
>gb|AC087069.3| Homo sapiens chromosome 7 clone RP11-7P19, complete sequence Length = 159620 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 422 ctggaccagccacttacaaat 442 ||||||||||||||||||||| Sbjct: 116314 ctggaccagccacttacaaat 116334
>gb|AF318067.1|AF318067 Physarum polycephalum GTP cyclohydrolase I gene, partial cds Length = 4583 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 128 aaggaattcaacaaaattctgctttatattata 160 |||||| || ||||||||||||||||| ||||| Sbjct: 4439 aaggaaatccacaaaattctgctttattttata 4471
>gb|AC007029.3|AC007029 Homo sapiens clone RP5-855F16, complete sequence Length = 95345 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 ccagattctgaagaaaaatga 219 ||||||||||||||||||||| Sbjct: 533 ccagattctgaagaaaaatga 513
>ref|XM_593424.2| PREDICTED: Bos taurus similar to ring finger protein 111 (LOC540353), partial mRNA Length = 3857 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 gcagaggtttgatgatgaag 353 |||||||||||||||||||| Sbjct: 1156 gcagaggtttgatgatgaag 1137
>gb|BT014102.1| Lycopersicon esculentum clone 133206R, mRNA sequence Length = 1133 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 atgttagcacccagctgaaa 304 |||||||||||||||||||| Sbjct: 240 atgttagcacccagctgaaa 259
>ref|XM_855725.1| PREDICTED: Canis familiaris similar to Eukaryotic translation initiation factor 3 subunit 6 interacting protein, transcript variant 3 (LOC607979), mRNA Length = 1896 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 aaaatgagcagatgtatgcgctgctggc 240 |||||||||||||| | ||||||||||| Sbjct: 1109 aaaatgagcagatgcacgcgctgctggc 1136
>ref|XM_855696.1| PREDICTED: Canis familiaris similar to Eukaryotic translation initiation factor 3 subunit 6 interacting protein, transcript variant 2 (LOC607979), mRNA Length = 1899 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 aaaatgagcagatgtatgcgctgctggc 240 |||||||||||||| | ||||||||||| Sbjct: 1112 aaaatgagcagatgcacgcgctgctggc 1139
>ref|XM_845042.1| PREDICTED: Canis familiaris similar to Eukaryotic translation initiation factor 3 subunit 6 interacting protein, transcript variant 1 (LOC607979), mRNA Length = 1912 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 aaaatgagcagatgtatgcgctgctggc 240 |||||||||||||| | ||||||||||| Sbjct: 1125 aaaatgagcagatgcacgcgctgctggc 1152
>ref|XM_754496.1| Ustilago maydis 521 hypothetical protein (UM03442.1) partial mRNA Length = 1716 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 atgtatgcgctgctggcaat 243 |||||||||||||||||||| Sbjct: 1612 atgtatgcgctgctggcaat 1593
>ref|XM_845330.1| PREDICTED: Canis familiaris similar to eukaryotic translation initiation factor 3 subunit 6 interacting protein, transcript variant 2 (LOC474513), mRNA Length = 2003 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 aaaatgagcagatgtatgcgctgctggc 240 |||||||||||||| | ||||||||||| Sbjct: 1221 aaaatgagcagatgcacgcgctgctggc 1248
>ref|XM_856289.1| PREDICTED: Canis familiaris similar to eukaryotic translation initiation factor 3 subunit 6 interacting protein, transcript variant 9 (LOC474513), mRNA Length = 1924 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 aaaatgagcagatgtatgcgctgctggc 240 |||||||||||||| | ||||||||||| Sbjct: 1142 aaaatgagcagatgcacgcgctgctggc 1169
>ref|XM_531741.2| PREDICTED: Canis familiaris similar to eukaryotic translation initiation factor 3 subunit 6 interacting protein, transcript variant 1 (LOC474513), mRNA Length = 1803 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 aaaatgagcagatgtatgcgctgctggc 240 |||||||||||||| | ||||||||||| Sbjct: 1021 aaaatgagcagatgcacgcgctgctggc 1048
>ref|XM_856236.1| PREDICTED: Canis familiaris similar to eukaryotic translation initiation factor 3 subunit 6 interacting protein, transcript variant 8 (LOC474513), mRNA Length = 1766 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 aaaatgagcagatgtatgcgctgctggc 240 |||||||||||||| | ||||||||||| Sbjct: 984 aaaatgagcagatgcacgcgctgctggc 1011
>ref|XM_856209.1| PREDICTED: Canis familiaris similar to eukaryotic translation initiation factor 3 subunit 6 interacting protein, transcript variant 7 (LOC474513), mRNA Length = 1801 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 aaaatgagcagatgtatgcgctgctggc 240 |||||||||||||| | ||||||||||| Sbjct: 1019 aaaatgagcagatgcacgcgctgctggc 1046
>ref|XM_856179.1| PREDICTED: Canis familiaris similar to eukaryotic translation initiation factor 3 subunit 6 interacting protein, transcript variant 6 (LOC474513), mRNA Length = 2008 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 aaaatgagcagatgtatgcgctgctggc 240 |||||||||||||| | ||||||||||| Sbjct: 1226 aaaatgagcagatgcacgcgctgctggc 1253
>ref|XM_856149.1| PREDICTED: Canis familiaris similar to eukaryotic translation initiation factor 3 subunit 6 interacting protein, transcript variant 5 (LOC474513), mRNA Length = 840 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 aaaatgagcagatgtatgcgctgctggc 240 |||||||||||||| | ||||||||||| Sbjct: 58 aaaatgagcagatgcacgcgctgctggc 85
>ref|XM_856124.1| PREDICTED: Canis familiaris similar to eukaryotic translation initiation factor 3 subunit 6 interacting protein, transcript variant 4 (LOC474513), mRNA Length = 1868 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 aaaatgagcagatgtatgcgctgctggc 240 |||||||||||||| | ||||||||||| Sbjct: 1086 aaaatgagcagatgcacgcgctgctggc 1113
>ref|XM_858768.1| PREDICTED: Canis familiaris similar to Eukaryotic translation initiation factor 3 subunit 6 interacting protein, transcript variant 2 (LOC480109), mRNA Length = 1896 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 aaaatgagcagatgtatgcgctgctggc 240 |||||||||||||| | ||||||||||| Sbjct: 1109 aaaatgagcagatgcacgcgctgctggc 1136
>ref|XM_537231.2| PREDICTED: Canis familiaris similar to Eukaryotic translation initiation factor 3 subunit 6 interacting protein, transcript variant 1 (LOC480109), mRNA Length = 1911 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 aaaatgagcagatgtatgcgctgctggc 240 |||||||||||||| | ||||||||||| Sbjct: 1124 aaaatgagcagatgcacgcgctgctggc 1151
>gb|AC099998.15| Mus musculus chromosome 17, clone RP23-27C1, complete sequence Length = 134805 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 aaggaattcaacaaaattct 147 |||||||||||||||||||| Sbjct: 106238 aaggaattcaacaaaattct 106219
>gb|AC142284.1| Pan troglodytes BAC clone RP43-163P11 from 7, complete sequence Length = 171686 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 tctgctttatattataaagt 164 |||||||||||||||||||| Sbjct: 75800 tctgctttatattataaagt 75819
>gb|AC138133.26| Medicago truncatula clone mth2-9o2, complete sequence Length = 149166 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 caacaaaattctgctttata 155 |||||||||||||||||||| Sbjct: 113138 caacaaaattctgctttata 113157
>emb|CR383678.10| Zebrafish DNA sequence from clone DKEY-205B5 in linkage group 5, complete sequence Length = 198392 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 tacaatgacaaaatgacaaa 330 |||||||||||||||||||| Sbjct: 86211 tacaatgacaaaatgacaaa 86192
>gb|AC126790.38| Medicago truncatula clone mth2-10d14, complete sequence Length = 127447 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 caacaaaattctgctttata 155 |||||||||||||||||||| Sbjct: 63492 caacaaaattctgctttata 63511
>gb|AC084251.13| Homo sapiens chromosome 8, clone RP11-152C15, complete sequence Length = 181400 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 attctgctttatattataaagtat 166 |||| ||||||||||||||||||| Sbjct: 145541 attcagctttatattataaagtat 145518
>gb|AC069417.19| Homo sapiens 3 BAC RP11-385K11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 107000 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 attctgctttatattataaa 162 |||||||||||||||||||| Sbjct: 16554 attctgctttatattataaa 16535
>gb|AC159646.2| Mus musculus BAC clone RP23-192K23 from chromosome 12, complete sequence Length = 194901 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 aggaattcaacaaaattctg 148 |||||||||||||||||||| Sbjct: 66448 aggaattcaacaaaattctg 66467
>emb|BX571945.15| Zebrafish DNA sequence from clone DKEY-267I17 in linkage group 5, complete sequence Length = 192769 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 tacaatgacaaaatgacaaa 330 |||||||||||||||||||| Sbjct: 163686 tacaatgacaaaatgacaaa 163667
>emb|CR859211.1| Pongo pygmaeus mRNA; cDNA DKFZp459D2038 (from clone DKFZp459D2038) Length = 2164 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 218 gagcagatgtatgcgctgctggca 241 |||||||||| ||||||||||||| Sbjct: 327 gagcagatgtctgcgctgctggca 304
>gb|AC005315.3| Arabidopsis thaliana chromosome 2 clone T9I4 map mi54, complete sequence Length = 108393 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 ttatattataaagtataagc 170 |||||||||||||||||||| Sbjct: 36627 ttatattataaagtataagc 36646
>gb|AC092661.2| Homo sapiens BAC clone RP11-510D4 from 4, complete sequence Length = 176026 Score = 40.1 bits (20), Expect = 6.4 Identities = 25/27 (92%) Strand = Plus / Minus Query: 308 aagtacaatgacaaaatgacaaanatg 334 ||||||||||| ||||||||||| ||| Sbjct: 147106 aagtacaatgaaaaaatgacaaagatg 147080
>gb|AC008876.6| Homo sapiens chromosome 5 clone CTD-2201P10, complete sequence Length = 152707 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 atggatttgcaaaccttatg 103 |||||||||||||||||||| Sbjct: 86911 atggatttgcaaaccttatg 86892
>gb|AC008568.7| Homo sapiens chromosome 5 clone CTC-546K23, complete sequence Length = 152706 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 atggatttgcaaaccttatg 103 |||||||||||||||||||| Sbjct: 65797 atggatttgcaaaccttatg 65816
>gb|AC011239.5| Homo sapiens BAC clone RP11-414D15 from 2, complete sequence Length = 189875 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gaaaagtacaatgacaaaat 324 |||||||||||||||||||| Sbjct: 154705 gaaaagtacaatgacaaaat 154724
>gb|AC092418.3| Homo sapiens chromosome 3 clone RP11-229A12, complete sequence Length = 164500 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 caaaacaaactcatagatga 282 |||||||||||||||||||| Sbjct: 31404 caaaacaaactcatagatga 31423
>gb|AF180818.1|AF180818 Dengue virus type 1 strain 16007 (PDK-13) polyprotein precursor, mRNA, complete cds Length = 10735 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 ataagcagtaccatcagaaa 184 |||||||||||||||||||| Sbjct: 6735 ataagcagtaccatcagaaa 6716
>gb|AF180817.1|AF180817 Dengue virus type 1 strain 16007 polyprotein precursor, mRNA, complete cds Length = 10735 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 ataagcagtaccatcagaaa 184 |||||||||||||||||||| Sbjct: 6735 ataagcagtaccatcagaaa 6716
>emb|CR848035.7| Zebrafish DNA sequence from clone CH211-203J1 in linkage group 12, complete sequence Length = 143674 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ttatgatgcgcaggtatgtt 118 |||||||||||||||||||| Sbjct: 89824 ttatgatgcgcaggtatgtt 89805
>gb|AC154386.2| Mus musculus BAC clone RP23-27A13 from 13, complete sequence Length = 170110 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 aaaattctgctttatattataaag 163 ||||||||||||| |||||||||| Sbjct: 112378 aaaattctgctttttattataaag 112401
>emb|CR626877.10| Zebrafish DNA sequence from clone DKEYP-114F9 in linkage group 19, complete sequence Length = 173824 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 ctgctttatattataaagta 165 |||||||||||||||||||| Sbjct: 95767 ctgctttatattataaagta 95786
>gb|AC155888.2| Medicago truncatula chromosome 7 BAC clone mth2-30a12, complete sequence Length = 104265 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 aaattctgctttatattata 160 |||||||||||||||||||| Sbjct: 50471 aaattctgctttatattata 50452
>gb|AC133079.4| Mus musculus BAC clone RP24-468O18 from 12, complete sequence Length = 176177 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 aggaattcaacaaaattctg 148 |||||||||||||||||||| Sbjct: 59186 aggaattcaacaaaattctg 59167
>emb|AL935293.11| Zebrafish DNA sequence from clone CH211-251D10 in linkage group 10, complete sequence Length = 188908 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 caaaattctgctttatattataaa 162 ||||||||||| |||||||||||| Sbjct: 8166 caaaattctgcattatattataaa 8189
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 gatgatgaagcatatgctgc 363 |||||||||||||||||||| Sbjct: 3417635 gatgatgaagcatatgctgc 3417616
>emb|CT030714.5| Mouse DNA sequence from clone RP23-223P19 on chromosome 13, complete sequence Length = 176581 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 aaaattctgctttatattataaag 163 ||||||||||||| |||||||||| Sbjct: 916 aaaattctgctttttattataaag 893
>gb|AC154662.2| Mus musculus BAC clone RP24-279F20 from chromosome 13, complete sequence Length = 170831 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 aaaattctgctttatattataaag 163 ||||||||||||| |||||||||| Sbjct: 32672 aaaattctgctttttattataaag 32695 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,827,987 Number of Sequences: 3902068 Number of extensions: 4827987 Number of successful extensions: 92406 Number of sequences better than 10.0: 136 Number of HSP's better than 10.0 without gapping: 136 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92035 Number of HSP's gapped (non-prelim): 353 length of query: 472 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 450 effective length of database: 17,147,199,772 effective search space: 7716239897400 effective search space used: 7716239897400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
