ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags19f07 |
|---|---|
| Clone Library Name | barley_pub |
>DBP9_SCHPO (O60080) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)| Length = 595 Score = 155 bits (391), Expect = 1e-37 Identities = 85/229 (37%), Positives = 128/229 (55%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQVYN L C+ ++ + V + SD + L P+I++ TP+ ++ G Sbjct: 99 ELAQQVYNVLEKLTAFCSKHIRFINVATNSSDTVQRPLLLDLPDIVIATPSRCVVHVASG 158 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 ++ + L +++DEADL+LS+ +D+K L +PR QS LMSAT S +I L K Sbjct: 159 VLP----LDKLKFLVIDEADLMLSFGYNEDMKTLSRSLPRGTQSFLMSATLSKNIASLQK 214 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 L+ NPF+L + KD + Q+ + CS +D +LIFVN Sbjct: 215 LVCRNPFILAV------KDKEASGKLTQYVVKCSEQDKFLLAYILLKLRLIKGKILIFVN 268 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 I+ +RL+LFLE+F ++S VLN+ELP NSRLHI+E +N L+ +IAT Sbjct: 269 EINRCYRLKLFLEQFGLKSLVLNSELPVNSRLHILEQYNKGLYQIIIAT 317
>DBP9_EMENI (Q5AZA6) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)| Length = 610 Score = 147 bits (372), Expect = 2e-35 Identities = 86/228 (37%), Positives = 130/228 (57%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL +QV ++ C ++ V +T +SD K L+ P+I+V+TPA V A + Sbjct: 113 ELAEQVQKVITTFAAFCGKDVRSVNLTQKVSDAVQKAMLADYPDIVVSTPARVIANLGTS 172 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 + E+L+ +++DEADL+LSY EDD+ AL IPR Q+ LMSAT + ++D L Sbjct: 173 ALS----LENLTHLVIDEADLVLSYGYEDDINALSKAIPRGVQTFLMSATLTAEVDTLKG 228 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 L +P +L L + KDD V QF + C+ + V+IFV Sbjct: 229 LFCRSPVILKLED----KDDH-GAGVSQFVVKCAEDEKFLLTYVIFKLQLIKGKVIIFVG 283 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIA 687 ID ++RL+LFLE+F I+S +LN+ELP NSR+H++E FN ++D +IA Sbjct: 284 DIDRSYRLKLFLEQFGIKSCILNSELPVNSRIHVVEEFNKGVYDIIIA 331
>DDX56_MOUSE (Q9D0R4) Probable ATP-dependent RNA helicase DDX56 (EC 3.6.1.-)| (DEAD box protein 56) (ATP-dependent 61 kDa nucleolar RNA helicase) Length = 546 Score = 145 bits (367), Expect = 9e-35 Identities = 84/230 (36%), Positives = 130/230 (56%), Gaps = 1/230 (0%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL +Q L C +++ V+A+ + L P+++V TP+ V + + + Sbjct: 93 ELARQAQAMIQQLAAYCARDVRVANVSAAEDSASQRAVLMEKPDVVVGTPSRVLSHLQQN 152 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 ++ +++SL ++++DEADLL S+ ED+LK+L+ H+PR Q+ LMSAT + D+ L + Sbjct: 153 TLK---LRDSLELLVVDEADLLFSFGFEDELKSLLCHLPRIYQAFLMSATFNEDVQTLKE 209 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISC-SAKDXXXXXXXXXXXXXXXXXVLIFV 540 L+LHNP L L E P +QQF + C + +D L+FV Sbjct: 210 LVLHNPVTLKLQE----SQLPGPDQLQQFQVVCETEEDKFLLLYALLKLSLIRGKALLFV 265 Query: 541 NSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 N+++ +RLRLFLE+F+I S VLN ELP SR HII FN L+D +IAT Sbjct: 266 NTLERGYRLRLFLEQFSIPSCVLNGELPLRSRCHIISQFNQGLYDCVIAT 315
>DBP9_ASPOR (Q2UFL0) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)| Length = 605 Score = 144 bits (362), Expect = 3e-34 Identities = 82/228 (35%), Positives = 129/228 (56%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL +QV N ++ C ++ V +T +SD + L+ P+++V+TPA V + Sbjct: 112 ELAEQVQNVVTTFAAFCGKDVRSVNLTQKVSDAVQRTMLADYPDLVVSTPARVVTNLGSS 171 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 + E+L+ +++DEADL+LSY E+D+ AL IPR Q+ LMSAT + ++D L Sbjct: 172 ALS----LENLTHLVIDEADLVLSYGYEEDINALAKAIPRGVQTFLMSATLTDEVDTLKG 227 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 L +P L L + KDD V QF + C+ + V+IFV+ Sbjct: 228 LFCRSPVTLKLED----KDDQ-GAGVSQFVVRCAEDEKFLLTYVIFKLQLIKGKVIIFVD 282 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIA 687 +D +R++LFLE+F I+S VLN+ELP NSR+H+++ FN ++D LIA Sbjct: 283 DVDRCYRVKLFLEQFGIKSCVLNSELPINSRIHVVQEFNKGVYDILIA 330
>DBP9_USTMA (Q4P7M1) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)| Length = 686 Score = 144 bits (362), Expect = 3e-34 Identities = 86/231 (37%), Positives = 128/231 (55%), Gaps = 2/231 (0%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL +QV+ S ++E +++V V S+K +L LS P++++ TP+ + Sbjct: 148 ELAEQVFRHLSVVIEYVRDDIRLVNVAREASEKVQRLLLSEKPDVVIATPSKALNYLQNA 207 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVP--HIPRSCQSILMSATSSPDIDKL 357 + S ESL+ +DEADL+LSY + D+K+L+ +P QS LMSAT + D+ KL Sbjct: 208 SLDLKSGMESLA---IDEADLILSYGHDADVKSLLGANFLPSHFQSFLMSATMTSDVSKL 264 Query: 358 TKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIF 537 LLL NP VL L H + N+ QF+ + +D ++F Sbjct: 265 KGLLLRNPVVLKLN---HDDEAASGSNLVQFYTKTTEEDKFLLAYVILKLKLIRGKAILF 321 Query: 538 VNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 VN ++ +RL+LFLEKF +R+ VLNAELP NSR I+E FN FDY++AT Sbjct: 322 VNELERGYRLKLFLEKFGLRACVLNAELPINSRYSIVEEFNKGKFDYIVAT 372
>DDX56_HUMAN (Q9NY93) Probable ATP-dependent RNA helicase DDX56 (EC 3.6.1.-)| (DEAD box protein 56) (ATP-dependent 61 kDa nucleolar RNA helicase) (DEAD-box protein 21) Length = 547 Score = 141 bits (355), Expect = 2e-33 Identities = 80/230 (34%), Positives = 131/230 (56%), Gaps = 1/230 (0%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL +Q + L C +++ V+A+ + L P+++V TP+ + + + + Sbjct: 93 ELARQAQSMIQQLATYCARDVRVANVSAAEDSVSQRAVLMEKPDVVVGTPSRILSHLQQD 152 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 ++ +++SL ++++DEADLL S+ E++LK+L+ H+PR Q+ LMSAT + D+ L + Sbjct: 153 SLK---LRDSLELLVVDEADLLFSFGFEEELKSLLCHLPRIYQAFLMSATFNEDVQALKE 209 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISC-SAKDXXXXXXXXXXXXXXXXXVLIFV 540 L+LHNP L L E P +QQF + C + +D L+FV Sbjct: 210 LILHNPVTLKLQE----SQLPGPDQLQQFQVVCETEEDKFLLLYALLKLSLIRGKSLLFV 265 Query: 541 NSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 N+++ ++RLRLFLE+F+I + VLN ELP SR HII FN +D +IAT Sbjct: 266 NTLERSYRLRLFLEQFSIPTCVLNGELPLRSRCHIISQFNQGFYDCVIAT 315
>DBP9_ASPFU (Q4X0C2) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)| Length = 649 Score = 139 bits (350), Expect = 8e-33 Identities = 80/228 (35%), Positives = 128/228 (56%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL +QV + C ++ V +T +SD + L+ P+++V+TPA V A + Sbjct: 142 ELAEQVQSVIIKFSAFCGKDVRSVNLTQKVSDAVQRTMLADYPDLIVSTPARVIANLGTS 201 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 + E+L+ +++DEADL+LSY ++D+ AL IPR Q+ LMSAT + ++D L Sbjct: 202 ALS----LENLTHLVIDEADLVLSYGYDEDINALAKAIPRGVQTFLMSATLTSEVDTLKG 257 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 L +P +L L + K+D + QF + C+ + V+IFV Sbjct: 258 LFCRSPVILKLED----KEDE-GAGISQFVVRCAEDEKFLLTYVIFKLQLIKGKVIIFVG 312 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIA 687 ID +RL+LFLE+F I+S VLN+ELP NSR+H+++ FN ++D +IA Sbjct: 313 DIDRCYRLKLFLEQFGIKSCVLNSELPINSRIHVVQEFNKGVYDIIIA 360
>DBP9_DEBHA (Q6BLM5) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)| Length = 586 Score = 134 bits (336), Expect = 3e-31 Identities = 75/231 (32%), Positives = 127/231 (54%), Gaps = 2/231 (0%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QV LL C SK++++ +++++SD+ I L P I+V+TPA + + K Sbjct: 104 ELSNQVSQFLEKLLIFCNSKIRLINISSNLSDQVINSLLINKPEIIVSTPAKLIQILEKN 163 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP--RSCQSILMSATSSPDIDKL 357 + ++ + +DE DL+LSY +DL+ L ++P ++ Q+ LMSAT + D++ + Sbjct: 164 VNSNLINLSTVKNLTIDEVDLVLSYGYLEDLQKLESYLPIKKNLQTFLMSATINDDLNDI 223 Query: 358 TKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIF 537 P +L L + +D N+ Q++ + D L+F Sbjct: 224 KSKFCSRPAILKLND-----EDSNQNNLVQYYAKTTEFDKFLLTYVIFKLNLIKGKTLVF 278 Query: 538 VNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 VN+ID +RL+LFLE+F +R +LN+ELP NSRL+I+E +N +++ LIAT Sbjct: 279 VNNIDRGYRLKLFLEQFGVRCCILNSELPINSRLNIVEQYNKNVYNLLIAT 329
>DBP9_CANAL (Q5A4P9) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)| Length = 574 Score = 133 bits (334), Expect = 6e-31 Identities = 81/233 (34%), Positives = 126/233 (54%), Gaps = 4/233 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QV+ LL T+K+ ++ +++S SD+ + L P I+++TPA + + K Sbjct: 96 ELSNQVFQFVEKLLTFSTNKINVLNLSSSYSDQVLNSLLVNKPEIIISTPAKLIQILEKN 155 Query: 184 I--VQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP--RSCQSILMSATSSPDID 351 + S++K + +DE DL+LS+ DDLK L ++P ++ Q+ LMSAT + D+D Sbjct: 156 EKNIDLSTVKN----LTIDEVDLVLSFGYLDDLKKLESYLPVKKNLQTFLMSATVNDDLD 211 Query: 352 KLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVL 531 L + P +L L E D N+ Q++ + D + Sbjct: 212 DLKQRYCTKPAILKLNE-----DSANQNNLVQYYAKTTEFDKFLLAYVIFKLNLIKGKTI 266 Query: 532 IFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 FVN+ID +RL+LFLE+F IR +LN+ELP NSRLHI+E FN ++ LIAT Sbjct: 267 AFVNNIDRGYRLKLFLEQFGIRCCILNSELPINSRLHIVEEFNKNVYHLLIAT 319
>DBP9_NEUCR (Q7S6F3) ATP-dependent RNA helicase dbp-9 (EC 3.6.1.-)| Length = 676 Score = 129 bits (325), Expect = 6e-30 Identities = 78/231 (33%), Positives = 127/231 (54%), Gaps = 2/231 (0%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QV+ + CT ++ ++T ++SD ++ L+ P+++V+TPA I G Sbjct: 179 ELADQVHKAIDAFSAFCTKDIQSAKLTDNVSDAVLRSLLANAPDVIVSTPARAWHNIESG 238 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRS-CQSILMSATS-SPDIDKL 357 + + L ++LDEADL+LSY ++D++ + +P+ Q+ +MSAT S ++D L Sbjct: 239 ALSVAK----LQYLVLDEADLVLSYGYDEDMENIARSLPKGGVQTTMMSATLVSDELDTL 294 Query: 358 TKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIF 537 NP +L L E +D+ + QF++ C D L+F Sbjct: 295 KGFFCRNPTMLDLKEEFSNEDE----KLTQFYVKCGEDDKWLISYLIFKLQLIKGPCLVF 350 Query: 538 VNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 V ID A+RL+LF E+F+IRS VLN+ELP N+R+ IIE FN ++D +IA+ Sbjct: 351 VADIDRAYRLKLFFEQFSIRSCVLNSELPINTRIKIIEEFNRGIYDIIIAS 401
>DBP9_GIBZE (Q4IJ56) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)| Length = 615 Score = 129 bits (324), Expect = 8e-30 Identities = 73/228 (32%), Positives = 118/228 (51%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QV C + ++T +S K + LS P+I+++TP+ ++ Sbjct: 124 ELADQVSKAIEQFASFCAKDISTAKLTDKVSSKVQRALLSNSPDIVISTPSTAWQNVNSS 183 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 + + L+ +ILDEADL+LSY +DL+ L +P+ Q ++MSAT S ++D L Sbjct: 184 ALS----IDKLTHLILDEADLVLSYGYSEDLENLSRSVPKGVQVMMMSATLSDEVDTLKG 239 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 + +P +L L E + + + QF C + +IFV+ Sbjct: 240 IFRRDPTLLDLKE-----KEAEGEGITQFVAKCGEDEKFLLAYVIFKLKLIKGKCIIFVS 294 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIA 687 ID +RL+LF E+F IRS +LN+ELP NSR+H++E FN ++D +IA Sbjct: 295 DIDRCYRLKLFFEQFGIRSCILNSELPLNSRVHVVEEFNRHVYDIIIA 342
>DBP9_YEAST (Q06218) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-) (DEAD box| protein 9) Length = 594 Score = 129 bits (323), Expect = 1e-29 Identities = 77/234 (32%), Positives = 124/234 (52%), Gaps = 5/234 (2%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQVYN L+ C+ ++ + +++ MSD + L P I+V TP + + Sbjct: 105 ELAQQVYNVLEKLVLYCSKDIRTLNISSDMSDSVLSTLLMDQPEIIVGTPGKLLDLLQTK 164 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP--RSCQSILMSATSSPDIDKL 357 I S L +++DE DL+L++ +DDL + ++P ++ Q+ LMSAT + DI L Sbjct: 165 I--NSISLNELKFLVVDEVDLVLTFGYQDDLNKIGEYLPLKKNLQTFLMSATLNDDIQAL 222 Query: 358 TKLLLHNPFVLTLTEVGHAKDDVVPKN---VQQFWISCSAKDXXXXXXXXXXXXXXXXXV 528 + +P +L D+ + KN + Q+++ S D Sbjct: 223 KQKFCRSPAILKFN------DEEINKNQNKLLQYYVKVSEFDKFLLCYVIFKLNLIKGKT 276 Query: 529 LIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 LIFVN+ID +RL+L +E+F I+S +LN+ELP NSR HI++ FN ++ LIAT Sbjct: 277 LIFVNNIDRGYRLKLVMEQFGIKSCILNSELPVNSRQHIVDQFNKNVYQLLIAT 330
>DBP9_ASHGO (Q74ZC1) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)| Length = 595 Score = 126 bits (316), Expect = 7e-29 Identities = 74/234 (31%), Positives = 131/234 (55%), Gaps = 5/234 (2%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQV L+ C+ ++++ ++A++ D + L+ P I+++TP+ + + Sbjct: 104 ELAQQVRVVLEKLVLYCSKDIRLLNISANVDDSVLGPLLAENPEIIISTPSQLVKILEGK 163 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP--RSCQSILMSATSSPDIDKL 357 +Q S+++ L +++DE DL+L++ ++DL + ++P ++ Q+ LMSAT + +I +L Sbjct: 164 HLQTISLRD-LRFLVIDEVDLILTFGYQEDLLKISQYLPLKKNLQAFLMSATLNEEIQEL 222 Query: 358 TKLLLHNPFVLTLTEVGHAKDDVVPKN---VQQFWISCSAKDXXXXXXXXXXXXXXXXXV 528 +P +L L DD + KN + Q+++ S D Sbjct: 223 KTKFCRSPAILKLN------DDEINKNKNKLLQYYVKVSEFDKFLLCYVIFKLSLIKGKT 276 Query: 529 LIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 +IFVN+ID +RL+L LE+F IRS +LN+ELP NSR HI++ FN ++ LIAT Sbjct: 277 IIFVNTIDRGYRLKLVLEQFGIRSCILNSELPLNSRQHIVDEFNKNVYQLLIAT 330
>DBP9_KLULA (Q6CUI6) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)| Length = 594 Score = 122 bits (306), Expect = 1e-27 Identities = 77/232 (33%), Positives = 125/232 (53%), Gaps = 3/232 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTA-SMSDKDIKLALSGPPNILVTTPACVAACISK 180 EL QQV L+ C+ ++K + +++ ++S +K L+ P IL+ TPA + + Sbjct: 102 ELAQQVLEVVEKLIVFCSQEIKCLNLSSGNVSGNLLKSLLTENPEILIATPAKLVDLLD- 160 Query: 181 GIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP--RSCQSILMSATSSPDIDK 354 Q +I + L +++DE DL+L++ ++DL + +P +S Q+ LMSAT + DI Sbjct: 161 --AQDVNI-DRLKFLVIDEVDLVLTFGYQEDLTKISERLPLRKSLQTFLMSATLNDDIQH 217 Query: 355 LTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLI 534 L + +P +L L + KD + Q+++ D LI Sbjct: 218 LKQQFCRSPAILKLNDDEVNKDQT---KLIQYYVKVGEFDKFLLCYVIFKLGLIKGKTLI 274 Query: 535 FVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 FVN+ID +RL+L LE+F I+S +LN+ELP NSR HI+E FN ++ LIAT Sbjct: 275 FVNNIDRGYRLKLVLEQFGIKSCILNSELPANSRQHIVEEFNKNVYQLLIAT 326
>DBP9_CANGA (Q6FUA6) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)| Length = 595 Score = 122 bits (305), Expect = 1e-27 Identities = 72/231 (31%), Positives = 119/231 (51%), Gaps = 2/231 (0%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQV L+ C+ +K++ + A +S + LS P I+V TP+ + + + Sbjct: 102 ELTQQVTAVLEKLIHYCSKDIKVLNLAADLSTSVLNTLLSENPEIIVGTPSKILNILERN 161 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP--RSCQSILMSATSSPDIDKL 357 + L +++DE DL+L++ +DDL + ++P ++ Q+ LMSAT S DI L Sbjct: 162 TDTVGI--DDLKFLVIDEVDLVLTFGYQDDLDKIAEYLPLKKNLQTFLMSATLSDDIQSL 219 Query: 358 TKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIF 537 + +P ++ + KD + Q+++ D L+F Sbjct: 220 KQKYCRSPAIIKFNDDEINKDKT---KLVQYYVRVGEFDKFLFCYVIFKLGLIKGKTLVF 276 Query: 538 VNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 VN+ID +RL+L LE+F I+S +LN ELP NSR HI++ FN ++ LIAT Sbjct: 277 VNNIDRGYRLKLVLEQFGIKSCILNNELPANSRQHIVDQFNKNVYHLLIAT 327
>DBP9_YARLI (Q6BZR4) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)| Length = 544 Score = 119 bits (299), Expect = 7e-27 Identities = 75/229 (32%), Positives = 121/229 (52%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 ELC+QV + L + C LK + VT + D I L P+I+V TP+ + + Sbjct: 93 ELCEQVSKVITKLTQFCPH-LKSLNVTQQLGDDVISSLLEEKPSIIVGTPSRLLKYAKEM 151 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 + +++DEADLLLSY ++DL L +P++ + +MSAT + + D + + Sbjct: 152 DCS------KVGYLVIDEADLLLSYGYKEDLIELSEMLPKTKHTFIMSATLNKESDLMKQ 205 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 + + V A+++ + + Q+++ CS +D ++FVN Sbjct: 206 QFCRS--TVASVAVTAAEEE---RKLLQYYVKCSERDKFLLAYVMFKLQLVKGKTIVFVN 260 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 ID +RLRLFLE+F I++ VLN+ELP SRLHI+E FN +F+ LI T Sbjct: 261 EIDRCYRLRLFLEQFGIKACVLNSELPIASRLHIVEQFNKGVFNLLICT 309
>DBP9_CRYNE (Q5K7L2) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)| Length = 627 Score = 115 bits (289), Expect = 1e-25 Identities = 76/235 (32%), Positives = 127/235 (54%), Gaps = 6/235 (2%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QV + ++ + C ++ V V A + ++ L+ P+I+++TP + + Sbjct: 110 ELALQVSSFTKNVTKYCDGLVQCVDVAAGGASIQ-RVLLNDKPDIVISTPTKLLS----- 163 Query: 184 IVQGSSIKES-LSMMILDEADLLLSYRCEDDLKALVPH----IPR-SCQSILMSATSSPD 345 ++Q S+ S LS + +DEADLLLSY +DDL ++ IP+ Q LMSAT S D Sbjct: 164 LLQSKSLSLSQLSFLAIDEADLLLSYGFKDDLTRIMDPTSGWIPKLGVQGCLMSATLSDD 223 Query: 346 IDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXX 525 ++ + L+L NP +LTL+E A + Q + S +D Sbjct: 224 VEGIKGLVLRNPAILTLSEPASASS-----LLSQHYTHTSERDKFLLIYVLLKLKLIRGK 278 Query: 526 VLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 +IFVN ++ +R++LFLE+F ++ V+N+ELP SR H++E FN ++D ++AT Sbjct: 279 SIIFVNDVERGYRVKLFLEQFGVKCCVVNSELPLASRYHVVEEFNRGVYDVVVAT 333
>DRS1_ASPOR (Q2UQI6) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 820 Score = 71.2 bits (173), Expect = 3e-12 Identities = 54/229 (23%), Positives = 104/229 (45%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q YN A+ L + + Q+ S ++ + L P++++ TP I Sbjct: 384 ELAVQCYNVATKLATY--TDITFCQLVGGFSLREQENILKKRPDVIIATPG---RFIDHM 438 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 S ++L +++LDEAD +L D+L ++ IP+S Q++L SAT + +DKL + Sbjct: 439 RNSASFTVDTLEILVLDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDSVDKLIR 498 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 + L+ P L + + +++ + V+ + +D V++F Sbjct: 499 VGLNRPVRLMVDSKKNTSMNLIQEFVR---LRPGREDKRLGYLLHLCKEVYTGRVIVFFR 555 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 A R+R+ +++A L+ + Q R+ +E F +L+AT Sbjct: 556 QKKEAHRVRIAFGLLGLKAAELHGSMSQEQRIRSVENFREGKVSFLLAT 604
>DRS1_CRYNE (Q5KIK3) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 808 Score = 71.2 bits (173), Expect = 3e-12 Identities = 49/187 (26%), Positives = 87/187 (46%) Frame = +1 Query: 130 PNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSC 309 P+IL+ TP + ++ S +L ++++DEAD +L D+L+ ++ PRS Sbjct: 348 PDILIATPGRLIDHLTN---TPSFTLSALDVLVIDEADRMLEAGFTDELEEIIKACPRSR 404 Query: 310 QSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXX 489 Q++L SAT + +D+L KL L P + + + + + Q ++ + D Sbjct: 405 QTMLFSATMTDSVDELVKLSLDKPIRVFVDPKRN-----TARGLTQEFVRIRSDDSRSPS 459 Query: 490 XXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARL 669 +IF S A ++R+ F +++A L+ L Q RL + F A Sbjct: 460 LLALCKRTIREKCIIFFRSKALAHQMRIVFGLFGLKAAELHGNLTQEQRLQALNDFKAGT 519 Query: 670 FDYLIAT 690 DYL+AT Sbjct: 520 VDYLLAT 526
>DRS1_ASPFU (Q4WRV2) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 830 Score = 67.8 bits (164), Expect = 3e-11 Identities = 54/229 (23%), Positives = 103/229 (44%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q YN A+ L + + Q+ S ++ + L P++++ TP I Sbjct: 392 ELAVQCYNVATKLAT--HTDITFCQLVGGFSLREQENILKKRPDVIIATPG---RFIDHM 446 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 S ++L +++LDEAD +L D+L ++ IP+S Q++L SAT + +DKL + Sbjct: 447 RNSPSFTVDTLEILVLDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDSVDKLIR 506 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 + L+ P L + + ++ + V+ + +D V++F Sbjct: 507 VGLNRPVRLMVDSKKNTSMNLTQEFVR---LRPGREDKRLGYLLYLCNEIYTGRVIVFFR 563 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 A R+R+ +++A L+ + Q R+ +E F +L+AT Sbjct: 564 QKREAHRVRIVFGLLGLKAAELHGSMSQEQRIKSVENFREGKVAFLLAT 612
>DDX27_MOUSE (Q921N6) Probable ATP-dependent RNA helicase DDX27 (EC 3.6.1.-)| (DEAD box protein 27) Length = 760 Score = 63.9 bits (154), Expect = 4e-10 Identities = 55/230 (23%), Positives = 97/230 (42%), Gaps = 1/230 (0%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QV++ L + C+ + + K + AL P+IL+ TP + + Sbjct: 266 ELGIQVHSVTKQLAQFCS--ITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNC 323 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 S S+ ++ILDEAD +L E+ +K ++ Q++L SAT + ++ L Sbjct: 324 ---PSFHLSSIEVLILDEADKMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLAS 380 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQF-WISCSAKDXXXXXXXXXXXXXXXXXVLIFV 540 + L NP + + ++ DV P Q+F I + + V++F Sbjct: 381 VSLKNPVRIFV----NSNTDVAPFLRQEFIRIRPNREGDREAIVAALLMRTFTDHVMLFT 436 Query: 541 NSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 + A R+ + L ++ L+ L Q RL + F D L+AT Sbjct: 437 QTKKQAHRMHILLGLLGLQVGELHGNLSQTQRLEALRRFKDEQIDILVAT 486
>DDX47_HUMAN (Q9H0S4) Probable ATP-dependent RNA helicase DDX47 (EC 3.6.1.-)| (DEAD box protein 47) Length = 455 Score = 63.9 bits (154), Expect = 4e-10 Identities = 49/193 (25%), Positives = 93/193 (48%) Frame = +1 Query: 112 LALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVP 291 LAL+ P+I++ TP + + +G +++ +L +++DEAD +L+ E ++ ++ Sbjct: 137 LALAKKPHIIIATPGRLIDHLEN--TKGFNLR-ALKYLVMDEADRILNMDFETEVDKILK 193 Query: 292 HIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAK 471 IPR ++ L SAT + + KL + L NP ++ +K V K +QQ++I +K Sbjct: 194 VIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVS----SKYQTVEK-LQQYYIFIPSK 248 Query: 472 DXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIE 651 +IF ++ +N R L L + L+ ++ Q+ RL + Sbjct: 249 -FKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLN 307 Query: 652 AFNARLFDYLIAT 690 F A+ L+AT Sbjct: 308 KFKAKARSILLAT 320
>IF4A_CANAL (P87206) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 397 Score = 63.5 bits (153), Expect = 6e-10 Identities = 55/201 (27%), Positives = 95/201 (47%) Frame = +1 Query: 88 SMSDKDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCE 267 SMSD DI+ SG I+V TP V I + + +K M ILDEAD +LS + Sbjct: 130 SMSD-DIEAFRSGV-QIVVGTPGRVLDMIERRYFKTDKVK----MFILDEADEMLSSGFK 183 Query: 268 DDLKALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQ 447 + + + +P + Q +L+SAT D+ ++T ++NP + + KD++ + ++Q Sbjct: 184 EQIYNIFRLLPETTQIVLLSATMPQDVLEVTTKFMNNPVRILV-----KKDELTLEGIKQ 238 Query: 448 FWISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQ 627 F+I+ +D +IF N+ L L + + ++A+LPQ Sbjct: 239 FYINVELEDYKFDCLCDLYDSISVTQAVIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQ 298 Query: 628 NSRLHIIEAFNARLFDYLIAT 690 R I++ F + LI+T Sbjct: 299 AERDTIMKEFRSGSSRILIST 319
>DDX27_HUMAN (Q96GQ7) Probable ATP-dependent RNA helicase DDX27 (EC 3.6.1.-)| (DEAD box protein 27) Length = 796 Score = 63.5 bits (153), Expect = 6e-10 Identities = 55/230 (23%), Positives = 96/230 (41%), Gaps = 1/230 (0%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QV++ L + C + + K + AL P+IL+ TP + + Sbjct: 300 ELGIQVHSVTRQLAQFCN--ITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNC 357 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 S S+ ++ILDEAD +L E+ +K ++ Q++L SAT + ++ L Sbjct: 358 ---PSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLAS 414 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQF-WISCSAKDXXXXXXXXXXXXXXXXXVLIFV 540 + L NP + + ++ DV P Q+F I + + V++F Sbjct: 415 VSLKNPVRIFV----NSNTDVAPFLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFT 470 Query: 541 NSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 + A R+ + L ++ L+ L Q RL + F D L+AT Sbjct: 471 QTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDILVAT 520
>DDX47_MOUSE (Q9CWX9) Probable ATP-dependent RNA helicase DDX47 (EC 3.6.1.-)| (DEAD box protein 47) Length = 455 Score = 62.8 bits (151), Expect = 1e-09 Identities = 48/193 (24%), Positives = 93/193 (48%) Frame = +1 Query: 112 LALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVP 291 LAL+ P+I++ TP + + +G +++ +L +++DEAD +L+ E ++ ++ Sbjct: 137 LALAKKPHIVIATPGRLIDHLEN--TKGFNLR-ALKYLVMDEADRILNMDFETEVDKILK 193 Query: 292 HIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAK 471 IPR ++ L SAT + + KL + L NP ++ +K V K +QQ+++ +K Sbjct: 194 VIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVS----SKYQTVEK-LQQYYLFIPSK 248 Query: 472 DXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIE 651 +IF ++ +N R L L + L+ ++ Q+ RL + Sbjct: 249 -FKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLN 307 Query: 652 AFNARLFDYLIAT 690 F A+ L+AT Sbjct: 308 KFKAKARSILLAT 320
>DRS1_GIBZE (Q4I830) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 796 Score = 62.4 bits (150), Expect = 1e-09 Identities = 54/230 (23%), Positives = 103/230 (44%), Gaps = 1/230 (0%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q + A+ L K + S+ ++++L L P++++ TP I Sbjct: 338 ELAIQCHAVATKLAAFTDIKFTLAVGGLSLKAQELELKLR--PDVIIATPG---RFIDHM 392 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 S +++ +++LDEAD +L D+L ++ +P+S Q++L SAT + +D+L + Sbjct: 393 RNSASFSVDTVEILVLDEADRMLEDGFADELNEILTTLPKSRQTMLFSATMTSSVDRLIQ 452 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQF-WISCSAKDXXXXXXXXXXXXXXXXXVLIFV 540 + L+ P + + +++ V VQ+F + +D V+IF Sbjct: 453 IGLNRPARVMV----NSQKKTVTTLVQEFVRLRPGREDKRMGYLAHVCKNLYKERVIIFF 508 Query: 541 NSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 +A R R+ + A L+ + Q R+ +E F YL+AT Sbjct: 509 RQKKDAHRARIIFGLLGLSCAELHGSMNQTQRISSVEDFRDGKVAYLLAT 558
>RHLB_PSEPK (Q88NB7) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 398 Score = 62.0 bits (149), Expect = 2e-09 Identities = 56/232 (24%), Positives = 104/232 (44%), Gaps = 3/232 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMS-DKDIKLALSGPPNILVTTPACVAACISK 180 EL Q+ +A++L + + L ++ M DK +K + +ILV TP + + Sbjct: 95 ELVVQIAKDAAALTKY--TGLNVMSFVGGMDFDKQLKALEARHCDILVATPGRLLDFNQR 152 Query: 181 GIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSC--QSILMSATSSPDIDK 354 G V + + +M+LDEAD +L ++ ++ P Q++L SAT + D+ Sbjct: 153 GEVH----LDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTDDVMN 208 Query: 355 LTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLI 534 L K NP ++ + ++V + V+Q + + D V++ Sbjct: 209 LAKQWTTNPAIVEIEP-----ENVASETVEQHVYAVAGSDKYKLLYNLVTQNKWER-VMV 262 Query: 535 FVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 F N D R+ L + I +A L+ ++PQ+ R+ +E+F L+AT Sbjct: 263 FANRKDEVRRIEEKLVRDGINAAQLSGDVPQHKRIRTLESFREGRITVLVAT 314
>IF4A_DEBHA (Q6BRN4) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 397 Score = 61.6 bits (148), Expect = 2e-09 Identities = 54/201 (26%), Positives = 93/201 (46%) Frame = +1 Query: 88 SMSDKDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCE 267 SM D DI+ SG I+V TP V I + + +K M ILDEAD +LS + Sbjct: 130 SMKD-DIEAFKSGV-QIVVGTPGRVFDMIERRFFKTDKVK----MFILDEADEMLSSGFK 183 Query: 268 DDLKALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQ 447 + + + +P + Q +L+SAT D+ ++T ++NP + + KD++ + ++Q Sbjct: 184 EQIYNIFRLLPETTQVVLLSATMPQDVLEVTTKFMNNPVRILV-----KKDELTLEGIKQ 238 Query: 448 FWISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQ 627 F+I+ +D +IF N+ L L+ + ++A+LPQ Sbjct: 239 FYINVEQEDYKFDCLCDLYDSISVTQAVIFCNTRSKVEFLTTKLKGENFTVSAIHADLPQ 298 Query: 628 NSRLHIIEAFNARLFDYLIAT 690 R I+ F + LI+T Sbjct: 299 ADRDTIMNEFRSGSSRILIST 319
>RRP3_YARLI (Q6CH58) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 480 Score = 61.6 bits (148), Expect = 2e-09 Identities = 51/209 (24%), Positives = 92/209 (44%) Frame = +1 Query: 64 LKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEAD 243 L+ V M+ +ALS P+++V TP + + +G S++ +L +++DEAD Sbjct: 161 LRTAVVVGGMNMMTQAVALSKKPHVIVATPGRLVDHLEN--TKGFSLR-TLKFLVMDEAD 217 Query: 244 LLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDD 423 LL L ++ IPR + L SAT + ++KL + L +P + ++ D Sbjct: 218 RLLDMEFGPSLDKILKVIPRQRNTYLFSATMTSKVEKLQRASLVDPVRVAVSTKYQTAD- 276 Query: 424 VVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSA 603 N+ Q+ + C K ++IF + + R+ L L + Sbjct: 277 ----NLLQYMVFCPFK-HKDTHLVYLVSENAGNSMIIFARTKSDTQRISLLLRNLGYGAI 331 Query: 604 VLNAELPQNSRLHIIEAFNARLFDYLIAT 690 L+ +L Q +RL + F + + LIAT Sbjct: 332 PLHGDLSQTARLGALNKFKSGSRNILIAT 360
>RHLE_ECOLI (P25888) Putative ATP-dependent RNA helicase rhlE (EC 3.6.1.-)| Length = 454 Score = 61.2 bits (147), Expect = 3e-09 Identities = 50/193 (25%), Positives = 81/193 (41%) Frame = +1 Query: 112 LALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVP 291 + L G ++LV TP + + V+ + + +++LDEAD +L D++ ++ Sbjct: 120 MKLRGGVDVLVATPGRLLDLEHQNAVK----LDQVEILVLDEADRMLDMGFIHDIRRVLT 175 Query: 292 HIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAK 471 +P Q++L SAT S DI L + LLHNP + + A D V + K Sbjct: 176 KLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQH------VHFVDK 229 Query: 472 DXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIE 651 VL+F + A L L K IRSA ++ Q +R + Sbjct: 230 KRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALA 289 Query: 652 AFNARLFDYLIAT 690 F + L+AT Sbjct: 290 DFKSGDIRVLVAT 302
>RHLB_PSESM (Q887N8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 397 Score = 60.8 bits (146), Expect = 4e-09 Identities = 56/232 (24%), Positives = 102/232 (43%), Gaps = 3/232 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMS-DKDIKLALSGPPNILVTTPACVAACISK 180 EL Q+ +A+ L + + L ++ M DK +K + +ILV TP + + Sbjct: 94 ELVVQIAKDAADLTKY--TNLNVMTFVGGMDFDKQLKQLEARHCDILVATPGRLLDFNQR 151 Query: 181 GIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSC--QSILMSATSSPDIDK 354 G V + + +M+LDEAD +L ++ ++ P Q++L SAT + D+ Sbjct: 152 GEVH----LDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPHKGERQTLLFSATFTEDVMN 207 Query: 355 LTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLI 534 L K +P ++ + + A D NV+Q + + D V++ Sbjct: 208 LAKQWTTDPSIVEIESLNVASD-----NVEQHIYAVAGADKYKLLYNLVTDNGWER-VMV 261 Query: 535 FVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 F N D R+ L + + +A L+ ++PQ+ R+ +E F L+AT Sbjct: 262 FANRKDEVRRIEERLVRDGVNAAQLSGDVPQHKRIKTLEGFREGKIRVLVAT 313
>PRP28_KLULA (Q6CT49) Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 539 Score = 60.8 bits (146), Expect = 4e-09 Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 2/231 (0%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQ+ +E S+ +L IV + S ++I L +ILV TP + C+ Sbjct: 225 ELAQQIQHEGQSITKLWKRPCNIVSIVGGHSLEEISANLRDGCDILVATPGRLLDCLDSH 284 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP--RSCQSILMSATSSPDIDKL 357 ++ + ++ ++LDEAD ++ + ED L ++ + Q+++ +AT SP I+K+ Sbjct: 285 LL----FLKQVNTLVLDEADKMIDFGFEDQLTTILAKTETISNRQTMMFTATFSPTIEKV 340 Query: 358 TKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIF 537 L P +T+ ++ PK ++Q ++ ++IF Sbjct: 341 ANGYLKKPSYVTV-----GGEESKPK-IKQIVRYVPDEEEKLKILVKDFLPNYKAPIIIF 394 Query: 538 VNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 +N A L L + R+ L+ Q R H + D LIAT Sbjct: 395 INYKRTADWLFDKLREARFRATTLHGSKSQEQREHSLSLLRNGKVDILIAT 445
>RRP3_SCHPO (Q9P6N8) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 465 Score = 60.8 bits (146), Expect = 4e-09 Identities = 49/209 (23%), Positives = 94/209 (44%) Frame = +1 Query: 64 LKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEAD 243 ++ V + M +ALS P++LV TP + + +G S+K +L +I+DEAD Sbjct: 143 VRSVVIVGGMDMVTQAVALSKKPHVLVCTPGRLMDHLEN--TKGFSLK-NLKYLIMDEAD 199 Query: 244 LLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDD 423 LL + ++ IP +++L SAT + ++KL + LH P + ++ D Sbjct: 200 RLLDMDFGPIIDKILKIIPHERRTLLFSATMTSKVEKLQRASLHQPVRVAVSSKFSTVDT 259 Query: 424 VVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSA 603 ++ + + KD ++IF ++++ RL + L + Sbjct: 260 LIQR---YLFFPFKHKD---TYLVYLVNELAGNSIIIFARTVNDTQRLAILLRTLGFSAI 313 Query: 604 VLNAELPQNSRLHIIEAFNARLFDYLIAT 690 L+ +L Q++RL + F + L+AT Sbjct: 314 PLHGQLSQSNRLGALNKFKSGARSTLVAT 342
>IF4A_CAEEL (P27639) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 402 Score = 60.1 bits (144), Expect = 6e-09 Identities = 54/229 (23%), Positives = 99/229 (43%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQ+ S+L E + I+ S +D + L +++V TP V I++ Sbjct: 108 ELAQQIQKVMSALGEYLN--VNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRN 165 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 + S IK M +LDEAD +LS +D + + +P+ Q +L+SAT ++ +T Sbjct: 166 ALDTSRIK----MFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTN 221 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 + NP + + KD++ + ++QF+I+ + +IF N Sbjct: 222 RFMRNPIRILV-----KKDELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCN 276 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 + L + + + L+ ++ Q R I+ F + LI T Sbjct: 277 TRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITT 325
>DEAD_BUCAP (Q8K9H6) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 601 Score = 59.7 bits (143), Expect = 8e-09 Identities = 49/192 (25%), Positives = 84/192 (43%) Frame = +1 Query: 115 ALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPH 294 AL P I+V TP + + +G + S+ L ++LDEAD +L +D++ ++ Sbjct: 121 ALRQGPQIVVGTPGRLLDHLKRGTLNLSN----LYALVLDEADEMLRMGFIEDVETIMSQ 176 Query: 295 IPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKD 474 IP+ Q+ L SAT I +++K + NP + + + D+ Q +W+ K Sbjct: 177 IPKEHQTALFSATMPEAIRRISKRFMKNPQEIKIQSNITTRPDI----KQSYWMVYGRK- 231 Query: 475 XXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEA 654 +IFV + + + LE+ SA LN ++ Q R +E Sbjct: 232 --TDALIRFLEVEDFSATIIFVKTKNATLEVSEALERNGYNSAALNGDMNQALREQTLER 289 Query: 655 FNARLFDYLIAT 690 + D LIAT Sbjct: 290 LKSGRLDILIAT 301
>DRS1_CANAL (Q5ACK7) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 613 Score = 59.7 bits (143), Expect = 8e-09 Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 1/230 (0%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QVY E L + L I ++ + + L P+I++ TP + I Sbjct: 210 ELALQVY-EFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTRPDIVIATPGRLIDHIRNS 268 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPR-SCQSILMSATSSPDIDKLT 360 S + + ++++DEAD +L +D+L ++ IP+ Q++L SAT + I L Sbjct: 269 ---PSFSVQDIQVLVIDEADRMLEEGFQDELTEILSLIPKHKRQTLLFSATMNTRIQDLI 325 Query: 361 KLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFV 540 +L L P + + V K +QQF + +D V++FV Sbjct: 326 QLSLQKPVRIMIDP----PKSVASKLLQQF-VRIRKRDQLKPALLYQLLKGVSSRVVVFV 380 Query: 541 NSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 + A RLR+ L ++ + L+ L Q RL ++ F + LI T Sbjct: 381 ARKETAHRLRIVLGLLGLKVSELHGALTQEQRLQNVKNFKSLEVPVLICT 430
>RRP3_NEUCR (Q7RY59) ATP-dependent rRNA helicase rrp-3 (EC 3.6.1.-)| Length = 515 Score = 59.3 bits (142), Expect = 1e-08 Identities = 53/229 (23%), Positives = 102/229 (44%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q+ +L L + L+ + M +AL P+++V TP + + K Sbjct: 169 ELAAQIAQAFEALGSLIS--LRCALILGGMDMVTQAIALGKKPHVIVATPGRLLDHLEK- 225 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 +G S++ S+ +++DEAD LL L+ ++ +PR ++ L SAT S ++ L + Sbjct: 226 -TKGFSLR-SMQYLVMDEADRLLDMDFGPILEKILKFLPRERRTFLFSATMSSKVESLQR 283 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 L +P ++++ +A + N +I KD ++IF Sbjct: 284 ASLRDPLKVSVSSNKYATVSTLKSN--YVFIPHMHKD---TYLVYLCNEFAGQTIIIFTR 338 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 ++ R+ + L + + L+ L Q++RL + F A + L+AT Sbjct: 339 TVLETQRIAILLRTLGMGAIPLHGGLSQSARLGALNKFRAGSREILVAT 387
>RRP3_ASPOR (Q2UNB7) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 472 Score = 58.9 bits (141), Expect = 1e-08 Identities = 52/193 (26%), Positives = 87/193 (45%) Frame = +1 Query: 112 LALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVP 291 +AL P+I+V TP + + +G S++ +L +++DEAD LL L ++ Sbjct: 165 IALGKKPHIIVATPGRLLDHLEN--TKGFSLR-NLKYLVMDEADRLLDMDFGPILDKILK 221 Query: 292 HIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAK 471 +PR ++ L SAT S ++ L + L NP + V +K V +QQ +I K Sbjct: 222 VLPRERRTYLFSATMSSKVESLQRASLQNPLRVA---VSSSKFQTV-STLQQSYIFIPHK 277 Query: 472 DXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIE 651 +IF ++ RL FL + L+ +L Q++RL + Sbjct: 278 -HKDLYLVYLLNEFVGQSCIIFCRTVHETQRLSFFLRLLGFGAIPLHGQLSQSARLGALG 336 Query: 652 AFNARLFDYLIAT 690 F +R D L+AT Sbjct: 337 KFRSRSRDILVAT 349
>DEAD_BUCAI (P57453) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 601 Score = 58.9 bits (141), Expect = 1e-08 Identities = 49/192 (25%), Positives = 83/192 (43%) Frame = +1 Query: 115 ALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPH 294 AL P I+V TP + + +G + S+ L ++LDEAD +L +D++ ++ Sbjct: 121 ALRQGPQIVVGTPGRLLDHLKRGTLNLSN----LHGLVLDEADEMLRMGFIEDVETIMAQ 176 Query: 295 IPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKD 474 IP+ Q+ L SAT I +++K + NP + + + D+ Q +W+ K Sbjct: 177 IPKEHQTALFSATMPEAIRRISKRFMRNPKEIKIQSNITTRPDI----KQSYWMVYGRK- 231 Query: 475 XXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEA 654 +IFV + + + LE+ SA LN ++ Q R +E Sbjct: 232 --TDALIRFLEAEDFSATIIFVRTKNATLEVSEALERNGYNSAALNGDMNQALREQTLER 289 Query: 655 FNARLFDYLIAT 690 D LIAT Sbjct: 290 LKNGRLDILIAT 301
>DDX49_HUMAN (Q9Y6V7) Probable ATP-dependent RNA helicase DDX49 (EC 3.6.1.-)| (DEAD box protein 49) Length = 483 Score = 58.5 bits (140), Expect = 2e-08 Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 9/202 (4%) Frame = +1 Query: 112 LALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCED---DLKA 282 L LS P++++ TP +A + SIK+ + +++DEAD LL C D DL+A Sbjct: 115 LELSRKPHVVIATPGRLADHLRSS--NTFSIKK-IRFLVMDEADRLLEQGCTDFTVDLEA 171 Query: 283 LVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFV------LTLTEVGHAKDDVVPKNVQ 444 ++ +P Q++L SAT + + +L L + PF ++ E + +VP+ V+ Sbjct: 172 ILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVK 231 Query: 445 QFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELP 624 ++ ++IF N+ L + L KF+ + L++ + Sbjct: 232 DAYL--------VHLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMK 283 Query: 625 QNSRLHIIEAFNARLFDYLIAT 690 Q R + F + ++ LIAT Sbjct: 284 QKERFAALAKFKSSIYRILIAT 305
>RRP3_GIBZE (Q4IFI0) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 486 Score = 58.2 bits (139), Expect = 2e-08 Identities = 54/229 (23%), Positives = 101/229 (44%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q+ +L L + + ++ M + I AL P+I+V TP + + K Sbjct: 139 ELATQIGQAFEALGSLISLRCAVIVGGLDMVPQAI--ALGKKPHIVVATPGRLVDHLEK- 195 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 +G S++ +L +I+DEAD LL + ++ +PR ++ L SAT S I+ L + Sbjct: 196 -TKGFSLR-TLKYLIMDEADRLLDMDFGPSIDKILKFVPRERRTYLFSATISSKIESLQR 253 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 L +P ++++ + + +N +I KD ++F Sbjct: 254 ASLRDPVKVSISSNKYQTVSTLLQN--YLFIPHPQKD---VHLIYLINEHAGQSTIVFTR 308 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 ++ R+ + L + L+ +L Q+SRL + F + D L+AT Sbjct: 309 TVWETQRVSILLRTLGFGAIPLHGQLSQSSRLGALNKFRSGTRDILVAT 357
>DBP4_NEUCR (Q7RZ35) ATP-dependent RNA helicase dbp-4 (EC 3.6.1.-)| Length = 823 Score = 57.8 bits (138), Expect = 3e-08 Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 5/194 (2%) Frame = +1 Query: 124 GPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPR 303 G NILV TP + + + G + ++L M++LDEAD ++ + + ALV H+P+ Sbjct: 177 GRMNILVCTPGRMLQHLDQ--TAGFDV-DNLQMLVLDEADRIMDMGFQQAVDALVEHLPK 233 Query: 304 SCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXX 483 S Q++L SAT S + L +L L +P +++ E A P +QQ +I + Sbjct: 234 SRQTLLFSATQSKRVSDLARLSLKDPEYVSVHE---AAASATPVGLQQHYIVTPLPE-KL 289 Query: 484 XXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKF-----AIRSAVLNAELPQNSRLHII 648 +++F++S ++R E F I L+ Q +RL I Sbjct: 290 DTLWGFLRTNLKSKIIVFMSS---GKQVRFVYESFKRMQPGIPLLHLHGRQKQIARLEIT 346 Query: 649 EAFNARLFDYLIAT 690 F + + L AT Sbjct: 347 NRFTSAKYSCLFAT 360
>IF4A_CRYNE (Q5KN60) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 401 Score = 57.8 bits (138), Expect = 3e-08 Identities = 44/191 (23%), Positives = 89/191 (46%) Frame = +1 Query: 118 LSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHI 297 L+ P+I+V TP V I++G ++ E++ M LDEAD +LS ++ + + + Sbjct: 143 LNEGPHIVVGTPGRVFDMINRGALK----TEAVMMFCLDEADEMLSTGFKESIYEIFQLL 198 Query: 298 PRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDX 477 P Q +L+SAT +P++ +TK + +P + + KD++ + ++QF+I+ ++ Sbjct: 199 PGETQVVLLSATMAPEVLDVTKKFMRDPIRILV-----KKDELTLEGIRQFYINVEKEEW 253 Query: 478 XXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAF 657 +IF ++ L L + ++ ++ Q R I++ F Sbjct: 254 KLETLCDLYETVTITQAVIFCSTRRKVDWLTQQLHDRQFTVSAMHGDMKQEEREVIMKEF 313 Query: 658 NARLFDYLIAT 690 + LI T Sbjct: 314 RSGSSRVLITT 324
>IF4A_NEUCR (Q7RV88) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 425 Score = 57.8 bits (138), Expect = 3e-08 Identities = 48/199 (24%), Positives = 89/199 (44%) Frame = +1 Query: 94 SDKDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDD 273 S +D AL P ++V TP V I + ++ S+K M +LDEAD +LS + Sbjct: 159 SVRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTDSMK----MFVLDEADEMLSRGFTEQ 214 Query: 274 LKALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFW 453 + + +P+S Q +L+SAT D+ ++T + P + + KD++ + ++QF+ Sbjct: 215 IYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMREPVRILV-----KKDELTLEGIKQFY 269 Query: 454 ISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNS 633 I+ ++ +IF N+ L L + ++ ++ Q Sbjct: 270 IAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQ 329 Query: 634 RLHIIEAFNARLFDYLIAT 690 R I++ F + LIAT Sbjct: 330 RDLIMKEFRSGSSRVLIAT 348
>DD19B_HUMAN (Q9UMR2) ATP-dependent RNA helicase DDX19B (EC 3.6.1.-) (DEAD box| protein 19B) (DEAD box RNA helicase DEAD5) Length = 479 Score = 57.4 bits (137), Expect = 4e-08 Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 2/187 (1%) Frame = +1 Query: 136 ILVTTPACVAACISK-GIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPH-IPRSC 309 I++ TP V SK + IK + +LDEAD++++ + D + +PR+C Sbjct: 213 IVIGTPGTVLDWCSKLKFIDPKKIK----VFVLDEADVMIATQGHQDQSIRIQRMLPRNC 268 Query: 310 QSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXX 489 Q +L SAT + K + ++ +P V+ L D ++Q+++ CS++D Sbjct: 269 QMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLD-----TIKQYYVLCSSRDEKFQA 323 Query: 490 XXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARL 669 +IF ++ A L L K + A+L+ E+ R +IE F Sbjct: 324 LCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGK 383 Query: 670 FDYLIAT 690 L+ T Sbjct: 384 EKVLVTT 390
>RRP3_ASPFU (Q4WJE9) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 472 Score = 57.4 bits (137), Expect = 4e-08 Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 1/230 (0%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q+ SL T ++ + M +AL P+I+V TP + + Sbjct: 131 ELAFQISKSFESLGS--TINVRCAVIVGGMDMVSQSIALGKKPHIIVATPGRLLDHLEN- 187 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 +G S++ +L +++DEAD LL L ++ +PR ++ L SAT S ++ L + Sbjct: 188 -TKGFSLR-TLKYLVMDEADRLLDMDFGPLLDKILKVLPRERRTFLFSATMSSKVESLQR 245 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQF-WISCSAKDXXXXXXXXXXXXXXXXXVLIFV 540 L NP ++ V K V +Q + ++ KD +IF Sbjct: 246 ASLSNPLRVS---VSSNKYQTVSTLLQSYLFLPHKHKD---IYLVYLLNEFVGQSTIIFT 299 Query: 541 NSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 ++ R+ L + L+ +L Q++RL + F +R D L+AT Sbjct: 300 RTVHETQRISFLLRSLGFGAIPLHGQLSQSARLGALGKFRSRSRDILVAT 349
>DD19A_HUMAN (Q9NUU7) ATP-dependent RNA helicase DDX19A (EC 3.6.1.-) (DEAD box| protein 19A) (DDX19-like protein) Length = 478 Score = 57.4 bits (137), Expect = 4e-08 Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 2/187 (1%) Frame = +1 Query: 136 ILVTTPACVAACISK-GIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPH-IPRSC 309 I++ TP V SK + IK + +LDEAD++++ + D + +PR+C Sbjct: 212 IVIGTPGTVLDWCSKLKFIDPKKIK----VFVLDEADVMIATQGHQDQSIRIQRMLPRNC 267 Query: 310 QSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXX 489 Q +L SAT + K + ++ +P V+ L D ++Q+++ CS++D Sbjct: 268 QMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLD-----TIKQYYVLCSSRDEKFQA 322 Query: 490 XXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARL 669 +IF ++ A L L K + A+L+ E+ R +IE F Sbjct: 323 LCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGK 382 Query: 670 FDYLIAT 690 L+ T Sbjct: 383 EKVLVTT 389
>PRP28_CANGA (Q6FM43) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 582 Score = 57.4 bits (137), Expect = 4e-08 Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 7/236 (2%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSK--LKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACIS 177 EL QQ+ E + LL +K L V + S DI L +IL+ TP + + Sbjct: 264 ELAQQISQEINRLLSAWENKKNLNAVSIVGGHSMSDISHTLRNGCDILIATPGRLLDVLD 323 Query: 178 KGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP----RSCQSILMSATSSPD 345 +V + + ++LDEAD ++ ED +K+++ H+ + Q++L +AT S Sbjct: 324 NHLV----VLNKIQSLVLDEADRMIDLGFEDQMKSILSHLMADELAARQTMLFTATLSSS 379 Query: 346 IDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXX 525 ++ + K L NP ++ VG D P Q + + D Sbjct: 380 VESIAKGYLKNPLHVS---VGSRWDSDKPLITQV--VRHTGDDDKKLSFLKDDLIKNGLP 434 Query: 526 VLIFVNSIDNAFRLRLFL-EKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 +IF+N + A L L L ++F I L+ Q+ R I+ + + LIAT Sbjct: 435 AIIFINYKETADWLTLRLSDRFNI--VTLHGSKSQSQRESAIQKLKSGTANVLIAT 488
>DBPA_BACSU (P42305) ATP-dependent RNA helicase dbpA (EC 3.6.1.-)| Length = 479 Score = 57.0 bits (136), Expect = 5e-08 Identities = 51/229 (22%), Positives = 99/229 (43%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QV + +++ ++K V S K L +I+V TP V I KG Sbjct: 81 ELAVQVKEDITNIGRF--KRIKATAVFGKSSFDKQKAELKQKSHIVVGTPGRVLDHIEKG 138 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 + + LS +++DEAD +L+ + ++A++ H+P ++L SAT DI+KL++ Sbjct: 139 TLP----LDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPTERTTMLFSATLPQDIEKLSR 194 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 + NP + + G + +N++ I ++ +IF Sbjct: 195 QYMQNPEHIEVKAAG-----LTTRNIEHAVIQV-REENKFSLLKDVLMTENPDSCIIFCR 248 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 + ++ +L L+ ++ + Q R ++ F + YL+AT Sbjct: 249 TKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRGEYRYLVAT 297
>DBP8_ASPOR (Q2UKX3) ATP-dependent RNA helicase dbp8 (EC 3.6.1.-)| Length = 443 Score = 57.0 bits (136), Expect = 5e-08 Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 9/238 (3%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q+Y + ++ +K + +T + LALS P++++ TP +A I+ Sbjct: 92 ELALQIYEQIKAIS--APQSMKPLLITGGTDMRSQALALSQRPHVVIATPGRLADHINTS 149 Query: 184 IVQGSSIKESLSMMILDEADLLLSYR-------CEDDLKALVPHIPRSCQSILMSATSSP 342 + + M++LDEAD LL+ E L AL P R Q++L +AT +P Sbjct: 150 GEDTVCGLKRVRMVVLDEADRLLAPGPGSMLPDVETCLSALPPSSER--QTLLFTATLTP 207 Query: 343 DIDKLTKL-LLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXX 519 ++ L + N + +TE+ + +P ++Q ++ Sbjct: 208 EVRALKSMPRAENKPPVFVTEISTENNGAIPPTLKQTYLKVPMTHREAFLHVLLSTERNS 267 Query: 520 XX-VLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 +IF N A L L + + R L++ LPQ+ R + F A L+AT Sbjct: 268 TKPAIIFCNHTKTADLLERMLRRLSHRVTSLHSLLPQSERNSNLARFRASAARILVAT 325
>RHLB_PSEAE (Q9HXE5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 397 Score = 57.0 bits (136), Expect = 5e-08 Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 3/232 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMS-DKDIKLALSGPPNILVTTPACVAACISK 180 EL Q+ +A++L + + L ++ M DK +K + +ILV TP + + Sbjct: 95 ELVVQIAKDAAALTKY--TGLNVMTFVGGMDFDKQLKQLEARFCDILVATPGRLLDFNQR 152 Query: 181 GIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSC--QSILMSATSSPDIDK 354 G V + + +M+LDEAD +L ++ ++ P Q++L SAT + D+ Sbjct: 153 GEVH----LDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPHKGERQTLLFSATFTDDVMN 208 Query: 355 LTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLI 534 L K +P ++ + A D V+Q + + D V++ Sbjct: 209 LAKQWTVDPAIVEIEPENVASD-----TVEQHVYAVAGSDKYKLLYNLVAQNNWER-VMV 262 Query: 535 FVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 F N D R+ L K I +A ++ ++PQ+ R+ +E F L+AT Sbjct: 263 FANRKDEVRRIEERLTKDGISAAQMSGDVPQHKRIRTLEGFREGKIRVLVAT 314
>RRP3_USTMA (Q4P3U9) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 551 Score = 57.0 bits (136), Expect = 5e-08 Identities = 53/229 (23%), Positives = 96/229 (41%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q+ + +L T ++ + M +ALS P+++V TP + + Sbjct: 183 ELAYQISQQVEALGS--TIGVRSATIVGGMDMMSQSIALSKRPHVIVATPGRLQDHLEN- 239 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 +G S++ L +++DEAD LL + L+ IPR +++L SAT + + KL + Sbjct: 240 -TKGFSLR-GLQYLVMDEADRLLDMDFGPIIDKLLQSIPRERRTMLFSATMTTKVAKLQR 297 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 L NP EV V ++ + KD +++F Sbjct: 298 ASLKNP---VRVEVDTKYTTVSTLKQHYMFMPFAHKD---TYLVHLANEQAGHSIIVFTR 351 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 ++ ++ RL + L + L+ +L Q +RL + F L+AT Sbjct: 352 TVHDSQRLSILLRLLGFPAIPLHGQLSQQARLGALNKFKTGGRSILVAT 400
>DEAD_KLEPN (P33906) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 642 Score = 57.0 bits (136), Expect = 5e-08 Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 1/197 (0%) Frame = +1 Query: 103 DIKL-ALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLK 279 D++L AL P I+V TP + + +G + S LS ++LDEAD +L +D++ Sbjct: 115 DVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSK----LSGLVLDEADEMLRMGFIEDVE 170 Query: 280 ALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWIS 459 ++ IP Q+ L SAT I ++T+ + P + + + D+ Q +W + Sbjct: 171 TIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDI----SQSYWTA 226 Query: 460 CSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRL 639 + +IFV + + + LE+ SA LN ++ Q R Sbjct: 227 YGMR--KNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALRE 284 Query: 640 HIIEAFNARLFDYLIAT 690 +E D LIAT Sbjct: 285 QALERLKDGRLDILIAT 301
>RRP3_EMENI (Q5B5E7) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 465 Score = 57.0 bits (136), Expect = 5e-08 Identities = 48/193 (24%), Positives = 87/193 (45%) Frame = +1 Query: 112 LALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVP 291 +AL P+I+V TP + + +G S++ +L + +DEAD LL + L ++ Sbjct: 159 IALGKKPHIIVATPGRLLDHLEN--TKGFSLR-NLKYLAIDEADRLLDMDFGESLDKIIR 215 Query: 292 HIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAK 471 +PR+ + L SAT S ++ L + L NP ++++ +K V +Q +I C Sbjct: 216 ILPRTRHTYLFSATMSTKVESLQRASLSNPVRVSVS----SKYQTV-STLQSSYI-CIPH 269 Query: 472 DXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIE 651 +IF ++ R+ L + L+ +L Q++RL + Sbjct: 270 KHKNLYLVYLLNEFAGQSAIIFTTTVHETQRVAFMLRALGFGAIPLHGQLSQSARLGALG 329 Query: 652 AFNARLFDYLIAT 690 F +R D L+AT Sbjct: 330 KFRSRSRDILVAT 342
>DEAD_BUCBP (Q89AF9) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 602 Score = 56.6 bits (135), Expect = 7e-08 Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 1/197 (0%) Frame = +1 Query: 103 DIKL-ALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLK 279 D++L +L P I+V TP + + + + S+ L ++LDEAD +L +D++ Sbjct: 116 DLQLKSLRKGPQIIVGTPGRLLDHLKRRTLSLSN----LHSLVLDEADEMLRMGFIEDVE 171 Query: 280 ALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWIS 459 ++ IP Q+ L SAT I ++++ + NP + + + D+ Q +W+ Sbjct: 172 TIMTEIPDRHQTALFSATMPEAIRRISRRFMKNPKEIRIQSNITTRPDI----QQSYWMV 227 Query: 460 CSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRL 639 K +IFV + + + LE++ SA LN ++ Q+ R Sbjct: 228 YGKK---TDALIRFLEAEDFSATIIFVRTKNATLEVSEVLERYGYNSAALNGDMNQSLRE 284 Query: 640 HIIEAFNARLFDYLIAT 690 +E D LIAT Sbjct: 285 QTLEKLKDGRLDILIAT 301
>DEAD_SHIFL (P0A9P8) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 56.6 bits (135), Expect = 7e-08 Identities = 58/240 (24%), Positives = 98/240 (40%), Gaps = 19/240 (7%) Frame = +1 Query: 28 EASSLLELCTSKLKIVQVTASMSD------------------KDIKL-ALSGPPNILVTT 150 +A +L L ++ VQV +M+D D++L AL P I+V T Sbjct: 72 KAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGT 131 Query: 151 PACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSA 330 P + + +G + S LS ++LDEAD +L +D++ ++ IP Q+ L SA Sbjct: 132 PGRLLDHLKRGTLDLSK----LSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALFSA 187 Query: 331 TSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXX 510 T I ++T+ + P + + + D+ Q +W + Sbjct: 188 TMPEAIRRITRRFMKEPQEVRIQSSVTTRPDI----SQSYWTVWGMR--KNEALVRFLEA 241 Query: 511 XXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 +IFV + + + LE+ SA LN ++ Q R +E D LIAT Sbjct: 242 EDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIAT 301
>DEAD_ECOLI (P0A9P6) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 56.6 bits (135), Expect = 7e-08 Identities = 58/240 (24%), Positives = 98/240 (40%), Gaps = 19/240 (7%) Frame = +1 Query: 28 EASSLLELCTSKLKIVQVTASMSD------------------KDIKL-ALSGPPNILVTT 150 +A +L L ++ VQV +M+D D++L AL P I+V T Sbjct: 72 KAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGT 131 Query: 151 PACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSA 330 P + + +G + S LS ++LDEAD +L +D++ ++ IP Q+ L SA Sbjct: 132 PGRLLDHLKRGTLDLSK----LSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALFSA 187 Query: 331 TSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXX 510 T I ++T+ + P + + + D+ Q +W + Sbjct: 188 TMPEAIRRITRRFMKEPQEVRIQSSVTTRPDI----SQSYWTVWGMR--KNEALVRFLEA 241 Query: 511 XXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 +IFV + + + LE+ SA LN ++ Q R +E D LIAT Sbjct: 242 EDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIAT 301
>DEAD_ECOL6 (P0A9P7) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 56.6 bits (135), Expect = 7e-08 Identities = 58/240 (24%), Positives = 98/240 (40%), Gaps = 19/240 (7%) Frame = +1 Query: 28 EASSLLELCTSKLKIVQVTASMSD------------------KDIKL-ALSGPPNILVTT 150 +A +L L ++ VQV +M+D D++L AL P I+V T Sbjct: 72 KAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGT 131 Query: 151 PACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSA 330 P + + +G + S LS ++LDEAD +L +D++ ++ IP Q+ L SA Sbjct: 132 PGRLLDHLKRGTLDLSK----LSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALFSA 187 Query: 331 TSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXX 510 T I ++T+ + P + + + D+ Q +W + Sbjct: 188 TMPEAIRRITRRFMKEPQEVRIQSSVTTRPDI----SQSYWTVWGMR--KNEALVRFLEA 241 Query: 511 XXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 +IFV + + + LE+ SA LN ++ Q R +E D LIAT Sbjct: 242 EDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIAT 301
>DEAD_ECO57 (Q8XA87) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 56.6 bits (135), Expect = 7e-08 Identities = 58/240 (24%), Positives = 98/240 (40%), Gaps = 19/240 (7%) Frame = +1 Query: 28 EASSLLELCTSKLKIVQVTASMSD------------------KDIKL-ALSGPPNILVTT 150 +A +L L ++ VQV +M+D D++L AL P I+V T Sbjct: 72 KAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGT 131 Query: 151 PACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSA 330 P + + +G + S LS ++LDEAD +L +D++ ++ IP Q+ L SA Sbjct: 132 PGRLLDHLKRGTLDLSK----LSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALFSA 187 Query: 331 TSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXX 510 T I ++T+ + P + + + D+ Q +W + Sbjct: 188 TMPEAIRRITRRFMKEPQEVRIQSSVTTRPDI----SQSYWTVWGMR--KNEALVRFLEA 241 Query: 511 XXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 +IFV + + + LE+ SA LN ++ Q R +E D LIAT Sbjct: 242 EDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIAT 301
>IF4A_CANGA (Q6FQQ6) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 396 Score = 56.2 bits (134), Expect = 9e-08 Identities = 48/187 (25%), Positives = 87/187 (46%), Gaps = 2/187 (1%) Frame = +1 Query: 136 ILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQS 315 I+V TP V I + + +IK M ILDEAD +LS ++ + + +P + Q Sbjct: 143 IVVGTPGRVFDNIQRRKFKVDNIK----MFILDEADEMLSTGFKEQIYQIFTMLPPTTQV 198 Query: 316 ILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXX 495 +L+SAT D+ ++T + NP + + KD++ + ++QF+++ + Sbjct: 199 VLLSATMPRDVLEVTAKFMQNPVRILV-----KKDELTLEGIKQFYVNVEEEQFKYDCLT 253 Query: 496 XXXXXXXXXXVLIFVNSIDNAFRL--RLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARL 669 +IF N+ L RL + F + S + ++LPQ R I++ F + Sbjct: 254 DLYDSISVTQAVIFCNTRRKVEELTQRLTADNFTVSS--IYSDLPQQERDTIMKEFRSGS 311 Query: 670 FDYLIAT 690 LI+T Sbjct: 312 SRILIST 318
>PRP28_SCHPO (Q9Y7T7) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 662 Score = 56.2 bits (134), Expect = 9e-08 Identities = 56/248 (22%), Positives = 94/248 (37%), Gaps = 19/248 (7%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQ+ E + E + V V + ++ +S +I+V TP + C+ + Sbjct: 336 ELAQQIQVEGNKFAE--PLGFRCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLERR 393 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRS------------------- 306 + + + +++DEAD +L EDD+ ++ +P S Sbjct: 394 LF----VLSQCTYVVMDEADRMLDMGFEDDVNKILSSLPSSNASEKDGSILATANSSSSR 449 Query: 307 CQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXX 486 Q+I+ SAT P + L K L P +LT+ +G A D V Q+ + Sbjct: 450 RQTIMFSATLPPRVANLAKSYLIEPVMLTIGNIGQAVDRV----EQRVEMISDDSKKWRR 505 Query: 487 XXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNAR 666 ++IFVN N + L + L+ Q R IE + Sbjct: 506 VEEILESNRFSPPIIIFVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNK 565 Query: 667 LFDYLIAT 690 D L+AT Sbjct: 566 TADILVAT 573
>IF4A_YEAST (P10081) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation initiation factor 1/2) (Stimulator factor I 37 kDa component) (p37) Length = 394 Score = 56.2 bits (134), Expect = 9e-08 Identities = 45/185 (24%), Positives = 83/185 (44%) Frame = +1 Query: 136 ILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQS 315 I+V TP V I + + IK M ILDEAD +LS ++ + + +P + Q Sbjct: 141 IVVGTPGRVFDNIQRRRFRTDKIK----MFILDEADEMLSSGFKEQIYQIFTLLPPTTQV 196 Query: 316 ILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXX 495 +L+SAT D+ ++T + NP + + KD++ + ++QF+++ ++ Sbjct: 197 VLLSATMPNDVLEVTTKFMRNPVRILV-----KKDELTLEGIKQFYVNVEEEEYKYECLT 251 Query: 496 XXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFD 675 +IF N+ L L + + ++LPQ R I++ F + Sbjct: 252 DLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSR 311 Query: 676 YLIAT 690 LI+T Sbjct: 312 ILIST 316
>SPB4_ASPFU (Q4WYJ7) ATP-dependent rRNA helicase spb4 (EC 3.6.1.-)| Length = 640 Score = 56.2 bits (134), Expect = 9e-08 Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 27/179 (15%) Frame = +1 Query: 4 ELCQQVYNEASSLL---------------------ELCTSKLKIVQVT----ASMSDKDI 108 EL Q+YN SSLL + +S LK+V ++ +D+ Sbjct: 98 ELASQIYNVLSSLLAFHPPSAAAINPSEDDDAPRPKFPSSTLKVVPQLLLGGSTTPAEDL 157 Query: 109 KLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALV 288 L PN+LV+TP + +S V + S M++LDEAD LL ++ L+ ++ Sbjct: 158 STFLKRSPNVLVSTPGRLLELLSSPHVHCP--QSSFEMLVLDEADRLLDLGFKETLQNIL 215 Query: 289 PHIPRSCQSILMSATSSPDIDKLTKLLLHNPF-VLTLTEVGHAKDDV-VPKNVQQFWIS 459 +P+ ++ L SA+ S +D++ ++ L NP V+ + G DD P ++Q +++ Sbjct: 216 RRLPKQRRTGLFSASVSEAVDQIVRVGLRNPVKVMVKVKGGSGVDDKRTPASLQMTYLT 274
>IF4A_ASPFU (Q4WX43) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 406 Score = 55.8 bits (133), Expect = 1e-07 Identities = 47/197 (23%), Positives = 91/197 (46%) Frame = +1 Query: 100 KDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLK 279 +D+K AL P ++V TP V I + +++ ++K M ILDEAD +LS + + Sbjct: 135 EDMK-ALQEGPQVVVGTPGRVQDMIQRRVLRTDNLK----MFILDEADEMLSRGFTEQIY 189 Query: 280 ALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWIS 459 + +P+S Q +L+SAT D+ ++T + +P + + K ++ + ++QF+I+ Sbjct: 190 DIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILV-----KKQELTLEGIKQFYIA 244 Query: 460 CSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRL 639 ++ +IF N+ L L + ++ ++ Q R Sbjct: 245 VEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRD 304 Query: 640 HIIEAFNARLFDYLIAT 690 I++ F + LIAT Sbjct: 305 VIMKEFRSGSSRVLIAT 321
>YN21_CAEEL (P34580) Putative ATP-dependent RNA helicase T26G10.1 in chromosome| III (EC 3.6.1.-) Length = 489 Score = 55.8 bits (133), Expect = 1e-07 Identities = 43/193 (22%), Positives = 91/193 (47%) Frame = +1 Query: 112 LALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVP 291 +AL+ P+I+V TP + + +G ++K +L +I+DEAD +L+ E +L ++ Sbjct: 157 MALARRPHIIVATPGRLVDHLEN--TKGFNLK-ALKFLIMDEADRILNMDFEVELDKILK 213 Query: 292 HIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAK 471 IPR ++ L SAT + + KL + L +P ++++ D N++Q +I K Sbjct: 214 VIPRERRTYLFSATMTKKVSKLERASLRDPARVSVSSRYKTVD-----NLKQHYIFVPNK 268 Query: 472 DXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIE 651 ++F + ++ + L + +++ L+ ++ Q RL + Sbjct: 269 -YKETYLVYLLNEHAGNSAIVFCATCATTMQIAVMLRQLGMQAVPLHGQMSQEKRLGSLN 327 Query: 652 AFNARLFDYLIAT 690 F ++ + L+ T Sbjct: 328 KFKSKAREILVCT 340
>IF4A_YARLI (Q6CDV4) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 395 Score = 55.8 bits (133), Expect = 1e-07 Identities = 47/197 (23%), Positives = 89/197 (45%) Frame = +1 Query: 100 KDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLK 279 +DI++ G +++V TP + I + I++ IK M ILDEAD +LS +D + Sbjct: 132 EDIRVIQEGV-HVIVGTPGRIHDMIERRILKTDLIK----MFILDEADEMLSREFKDPIY 186 Query: 280 ALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWIS 459 + +P + Q++L+SAT ++ +T + +P + + KD++ + ++QF+I Sbjct: 187 DIFTTLPETTQTVLLSATMPAEVLDITGKFMRDPVRILV-----KKDELTLEGIKQFYID 241 Query: 460 CSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRL 639 + +IF N+ L L + + ++ E Q+ R Sbjct: 242 VEQESYKFEVLCDLYETINVSQAVIFCNTRRKVDYLTQALTEADFTVSSMHGETEQSQRD 301 Query: 640 HIIEAFNARLFDYLIAT 690 I++AF LI T Sbjct: 302 VIMKAFRTGSSRILITT 318
>IF4A_KLULA (Q6CXT4) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 396 Score = 55.5 bits (132), Expect = 2e-07 Identities = 46/192 (23%), Positives = 86/192 (44%) Frame = +1 Query: 115 ALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPH 294 AL G I+V TP V I + I + +IK M ILDEAD +LS ++ + + Sbjct: 136 ALRGGAQIIVGTPGRVFDMIDRRIFKTDNIK----MFILDEADEMLSTGFKEQIYNIFTM 191 Query: 295 IPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKD 474 +P + Q +L+SAT D+ ++T + +P + + KD++ + + Q++++ + Sbjct: 192 LPPTSQVVLLSATMPGDVLEVTSKFMKDPVRILV-----KKDELTLEGIGQYYVNVEEEQ 246 Query: 475 XXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEA 654 +IF N+ L L + + + ++L Q R I++ Sbjct: 247 YKYDCLTDLYDSISVTQAVIFCNTRRKVEELTERLRENNFTVSAIYSDLQQQERDTIMKE 306 Query: 655 FNARLFDYLIAT 690 F + LI+T Sbjct: 307 FRSGSSRILIST 318
>DBP8_ASPFU (Q4WXW1) ATP-dependent RNA helicase dbp8 (EC 3.6.1.-)| Length = 526 Score = 55.5 bits (132), Expect = 2e-07 Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 9/238 (3%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q++ + ++ +K V +T + +AL+G P++++ TP +A I Sbjct: 175 ELALQIFEQIKAIS--APQSMKPVLITGGTDMRPQAIALAGRPHVVIATPGRLADHIKSS 232 Query: 184 IVQGSSIKESLSMMILDEADLLLSYR-------CEDDLKALVPHIPRSCQSILMSATSSP 342 + + M++LDEAD LL+ E L AL P R Q++L +AT +P Sbjct: 233 GEDTVCGLKRVRMVVLDEADRLLASGPGSMLPDVETCLSALPPSSER--QTLLFTATVTP 290 Query: 343 DIDKLTKLLLH-NPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXX 519 ++ L + N + +TE+ +P ++Q ++ Sbjct: 291 EVRALKNMPRSANKPPVFVTEISTENQGTIPPTLKQTYLKVPLTHREAFLHVLLSTEGNA 350 Query: 520 XX-VLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 ++F N A L L + + R L++ LPQ+ R + F A L+AT Sbjct: 351 SKPAIVFCNHTKTADLLERMLRRLSHRVTSLHSLLPQSERNANLARFRASAARILVAT 408
>DDX49_MOUSE (Q4FZF3) Probable ATP-dependent RNA helicase DDX49 (EC 3.6.1.-)| (DEAD box protein 49) Length = 480 Score = 55.5 bits (132), Expect = 2e-07 Identities = 46/202 (22%), Positives = 87/202 (43%), Gaps = 9/202 (4%) Frame = +1 Query: 112 LALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCED---DLKA 282 L LS P++++ TP +A + + + + +++DEAD LL C D DL+ Sbjct: 115 LELSRKPHVVIATPGRLADHLRSS---NTFNMKKIQFLVMDEADRLLEQGCTDFTTDLET 171 Query: 283 LVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPF------VLTLTEVGHAKDDVVPKNVQ 444 ++ +P Q++L SAT + + +L L + PF + E + +VP+ V+ Sbjct: 172 ILAAVPARRQTLLFSATLTDTLKELQGLATNEPFFWEAQATVRTVEQLDQRYLLVPEKVK 231 Query: 445 QFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELP 624 ++ ++IF N+ L + L KF + L++ + Sbjct: 232 DAYL--------VHLVQTFQDQLEDCSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMK 283 Query: 625 QNSRLHIIEAFNARLFDYLIAT 690 Q R + F + ++ LIAT Sbjct: 284 QKERFAALAKFKSSIYRILIAT 305
>DDX6_XENLA (P54824) Probable ATP-dependent RNA helicase DDX6 (EC 3.6.1.-)| (DEAD box protein 6) (ATP-dependent RNA helicase p54) (Xp54) Length = 481 Score = 55.1 bits (131), Expect = 2e-07 Identities = 46/208 (22%), Positives = 87/208 (41%) Frame = +1 Query: 67 KIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADL 246 K++ T + +D + L ++++ TP + I KG+ + I+ M++LDEAD Sbjct: 194 KVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHIQ----MIVLDEADK 249 Query: 247 LLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDV 426 LLS ++ ++ +P++ Q +L SAT + K L L P+ + L E ++ Sbjct: 250 LLSQDFMQIMEDIIMTLPKNRQILLYSATFPLSVQKFMTLHLQKPYEINLME------EL 303 Query: 427 VPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAV 606 K V Q++ + + + IF NS L + + Sbjct: 304 TLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSI-IFCNSSQRVELLAKKISQLGYSCFY 362 Query: 607 LNAELPQNSRLHIIEAFNARLFDYLIAT 690 ++A++ Q R + F L L+ T Sbjct: 363 IHAKMRQEHRNRVFHDFRNGLCRNLVCT 390
>RRP3_DEBHA (Q6BQ61) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 477 Score = 55.1 bits (131), Expect = 2e-07 Identities = 54/209 (25%), Positives = 87/209 (41%) Frame = +1 Query: 64 LKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEAD 243 L+ V + M D L P+ILV TP + + +G S+K +L +++DEAD Sbjct: 162 LRSVCIVGGMDMMDQARDLMRKPHILVATPGRIMDHLEH--TKGFSLK-NLKYLVMDEAD 218 Query: 244 LLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDD 423 LL L ++ IP + L SAT + I KL + LHNP + ++ D+ Sbjct: 219 RLLDMDFGPALDKILKIIPTQRTTYLFSATMTNKIAKLQRASLHNPVRVAVSNKYQTADN 278 Query: 424 VVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSA 603 +V +S K+ ++IF + ++ R L + Sbjct: 279 LVQ---SMMLVSDGYKN---TYLIHLLNEFLGKSIIIFTRTCAHSQRTALLARILGFSAV 332 Query: 604 VLNAELPQNSRLHIIEAFNARLFDYLIAT 690 L+ +L Q RL + F A + LIAT Sbjct: 333 PLHGQLTQAQRLGSLNKFKAGKANILIAT 361
>DEAD_HAEIN (P44586) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 613 Score = 55.1 bits (131), Expect = 2e-07 Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 1/197 (0%) Frame = +1 Query: 103 DIKL-ALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLK 279 DI+L AL ++V TP + I +G + S ++ ++LDEAD +L DD++ Sbjct: 115 DIQLRALKQGAQVVVGTPGRILDHIRRGTLNLSELR----FIVLDEADEMLRMGFIDDVE 170 Query: 280 ALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWIS 459 ++ +P + Q+ L SAT I ++TK +++P + + ++ P Q W Sbjct: 171 TVMAELPENHQTALFSATMPEPIRRITKRFMNDPQEVKI----KVNNENAPDIDQSCWYV 226 Query: 460 CSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRL 639 + +IF + + LEK RSA LN ++ Q R Sbjct: 227 HGVR--KNEALLRFLEVEDFDAAIIFARTKTGTLDITELLEKNGFRSAALNGDMTQQLRE 284 Query: 640 HIIEAFNARLFDYLIAT 690 ++ D ++AT Sbjct: 285 QTLDRLRNGSLDIVVAT 301
>DEAD_MYCTU (Q11039) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 563 Score = 54.7 bits (130), Expect = 3e-07 Identities = 50/211 (23%), Positives = 86/211 (40%) Frame = +1 Query: 58 SKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDE 237 S+L ++ + S L ++V TP + + + + S + ++LDE Sbjct: 109 SQLNVLPIYGGSSYAVQLAGLRRGAQVVVGTPGRMIDHLERATLDLSRV----DFLVLDE 164 Query: 238 ADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAK 417 AD +L+ DD++ ++ P Q L SAT P I KL+ LH+PF EV Sbjct: 165 ADEMLTMGFADDVERILSETPEYKQVALFSATMPPAIRKLSAKYLHDPF-----EVTCKA 219 Query: 418 DDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIR 597 V +N+ Q +I + K +++FV + + L Sbjct: 220 KTAVAENISQSYIQVARK---MDALTRVLEVEPFEAMIVFVRTKQATEEIAEKLRARGFS 276 Query: 598 SAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 +A ++ ++PQ R I A D L+AT Sbjct: 277 AAAISGDVPQAQRERTITALRDGDIDILVAT 307
>RRP3_CANAL (Q5ACU6) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 399 Score = 54.7 bits (130), Expect = 3e-07 Identities = 47/204 (23%), Positives = 87/204 (42%) Frame = +1 Query: 79 VTASMSDKDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSY 258 + M D L P+++V TP + + +G S+K +L +++DEAD LL Sbjct: 85 IVGGMDMMDQARDLMRKPHVIVATPGRIMDHLEH--TKGFSLK-NLKYLVMDEADRLLDM 141 Query: 259 RCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKN 438 L ++ IP + L SAT + I+KL + LHNP + ++ D++V Sbjct: 142 DFGPALDKILKVIPIKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSSKYQTADNLVQ-- 199 Query: 439 VQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAE 618 ++ K+ +++F ++ +A R L + L+ + Sbjct: 200 -SMMLVNDGYKN---TILIHLLNEFMGKSIIVFTRTVAHAQRTALLARILGFNAVPLHGQ 255 Query: 619 LPQNSRLHIIEAFNARLFDYLIAT 690 L Q+ RL + F + + L+AT Sbjct: 256 LSQSQRLGSLNKFKSNQANILVAT 279
>DDX10_HUMAN (Q13206) Probable ATP-dependent RNA helicase DDX10 (EC 3.6.1.-)| (DEAD box protein 10) Length = 875 Score = 54.7 bits (130), Expect = 3e-07 Identities = 43/187 (22%), Positives = 79/187 (42%), Gaps = 1/187 (0%) Frame = +1 Query: 133 NILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQ 312 NILV TP + + + + S L M++LDEAD +L D + A++ ++P+ Q Sbjct: 192 NILVCTPGRLLQHMDETV---SFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQ 248 Query: 313 SILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXX 492 ++L SAT + + L +L L NP + + E P ++Q +I C + Sbjct: 249 TLLFSATQTKSVKDLARLSLKNPEYVWVHEKAKYS---TPATLEQNYIVCELQQKISVLY 305 Query: 493 XXXXXXXXXXXVLIFVNSIDNAFRLRLFLE-KFAIRSAVLNAELPQNSRLHIIEAFNARL 669 ++ F + + + R+F + + L+ Q R+ + F + Sbjct: 306 SFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNEFVRKR 365 Query: 670 FDYLIAT 690 L AT Sbjct: 366 AAVLFAT 372
>DBP8_EMENI (Q5B3H7) ATP-dependent RNA helicase dbp8 (EC 3.6.1.-)| Length = 525 Score = 54.7 bits (130), Expect = 3e-07 Identities = 54/237 (22%), Positives = 101/237 (42%), Gaps = 8/237 (3%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q++ + ++ +K V +T + + L+G P+++V TP +A I+ Sbjct: 174 ELALQIFEQIKAIS--APQSMKPVLITGGTDMRSQAIELAGRPHVVVATPGRLADHINTS 231 Query: 184 IVQGSSIKESLSMMILDEADLLLS---YRCEDDLKALVPHI--PRSCQSILMSATSSPDI 348 + + + M++LDEAD LLS D++ + + P Q++L +AT +P++ Sbjct: 232 GTDTVAGLKRVRMVVLDEADRLLSPGPGSMLPDVETCLSFLPGPSQRQTLLFTATLTPEV 291 Query: 349 DKLTKLLLHNPF--VLTLTEVGHAKDDVVPKNVQQFWISCS-AKDXXXXXXXXXXXXXXX 519 L K + P + +TE+ D VP ++ ++ Sbjct: 292 RAL-KSMPQTPGKPPIFVTEISTEAKDTVPPTLRTTYVQVPLTHREAFLHVLLSTESNIT 350 Query: 520 XXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 ++F N+ +A L L R L++ LPQ+ R + F A L+AT Sbjct: 351 KSAIVFTNTTKSADLLERLLRSLGHRVTSLHSLLPQSERNSNLARFRASAARVLVAT 407
>IF4A_ASPOR (Q2UPY3) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 421 Score = 54.7 bits (130), Expect = 3e-07 Identities = 46/197 (23%), Positives = 91/197 (46%) Frame = +1 Query: 100 KDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLK 279 +D+K AL P ++V TP V I + +++ +K+ ILDEAD +LS + + Sbjct: 158 EDMK-ALGEGPEVVVGTPGRVHDMIQRRVLKTDHLKQ----FILDEADEMLSRGFTEQIY 212 Query: 280 ALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWIS 459 + +P+S Q +L+SAT D+ ++T + +P + + K ++ + ++QF+I+ Sbjct: 213 DIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILV-----KKQELTLEGIKQFYIA 267 Query: 460 CSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRL 639 ++ +IF N+ L L + ++ ++ Q+ R Sbjct: 268 VEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQSQRD 327 Query: 640 HIIEAFNARLFDYLIAT 690 I++ F + LIAT Sbjct: 328 VIMKEFRSGSSRVLIAT 344
>IF4A_DROME (Q02748) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 403 Score = 54.7 bits (130), Expect = 3e-07 Identities = 42/197 (21%), Positives = 94/197 (47%) Frame = +1 Query: 100 KDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLK 279 +D ++ SG +++V TP V I++ +++ IK + +LDEAD +LS +D ++ Sbjct: 140 EDARILESGC-HVVVGTPGRVYDMINRKVLRTQYIK----LFVLDEADEMLSRGFKDQIQ 194 Query: 280 ALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWIS 459 + +P Q IL+SAT PD+ ++++ + +P + + K+++ + ++QF+++ Sbjct: 195 DVFKMLPPDVQVILLSATMPPDVLEVSRCFMRDPVSILV-----KKEELTLEGIKQFYVN 249 Query: 460 CSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRL 639 ++ +IF N+ +L + + ++ ++ Q R Sbjct: 250 VKQENWKLGTLCDLYDTLSITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDRE 309 Query: 640 HIIEAFNARLFDYLIAT 690 I++ F + LI T Sbjct: 310 VIMKQFRSGSSRVLITT 326
>DBP3_CANAL (Q5APT8) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 564 Score = 54.3 bits (129), Expect = 3e-07 Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 6/235 (2%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCT-SKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISK 180 EL Q+Y+ +L+EL S + V V +S KD ++ N++V TP + I+ Sbjct: 234 ELALQIYD---NLIELTADSGVNCVAVYGGVS-KDDQIRKIKTANVVVATPGRLVDLIND 289 Query: 181 GIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRS-CQSILMSATSSPDIDKL 357 G + + + ++LDEAD +L E+D+K ++ + S Q+++ +AT ++ +L Sbjct: 290 GAINLGKV----NYLVLDEADRMLEKGFEEDIKTIISNTSNSERQTLMFTATWPKEVREL 345 Query: 358 TKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCS----AKDXXXXXXXXXXXXXXXXX 525 +++P +T VG + K + Q + K Sbjct: 346 ANNFMNSPVKVT---VGDRDELSANKRITQVVEVINKFDKEKKLIQLLRKYNANESSDNK 402 Query: 526 VLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 +LIF A R+ FL++ A ++ +L Q R + AF + + L+AT Sbjct: 403 ILIFALYKKEASRIENFLKRNRFSVAAIHGDLSQQQRTAALSAFKSGQSNLLLAT 457
>DRS1_ASHGO (Q75F95) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 734 Score = 54.3 bits (129), Expect = 3e-07 Identities = 46/192 (23%), Positives = 83/192 (43%) Frame = +1 Query: 115 ALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPH 294 AL P+I++ TP + I S +S+ ++++DEAD +L +D+L ++ Sbjct: 337 ALKLRPDIVIATPGRIIDHIRNS---ASFSVDSVEVLVIDEADRMLEDGFQDELNEIMSL 393 Query: 295 IPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKD 474 IP Q++L SAT + I +L L L P + + A + + + V + K Sbjct: 394 IPSKRQTLLFSATMNSRIKQLISLSLKKPVRIMIDPPKQAANKLTQEFV-RLRKREHLKP 452 Query: 475 XXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEA 654 +++FV + A RLR+ L +++ L+ L Q RL + Sbjct: 453 ALLYHLLRKLDSTGQKRIVVFVARKEVAHRLRVILGLLGMKAGELHGSLTQEQRLQSVNN 512 Query: 655 FNARLFDYLIAT 690 F + L+ T Sbjct: 513 FKSLDVPVLVCT 524
>DBP8_CANGA (Q6FQZ0) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 437 Score = 54.3 bits (129), Expect = 3e-07 Identities = 57/234 (24%), Positives = 97/234 (41%), Gaps = 5/234 (2%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q+ + ++L +++ V S D L L P+ ++ TP +A I Sbjct: 88 ELAMQIAEQFTALGSYMN--IRVALVVGGESIVDQALQLQRKPHFIIATPGRLAHHILNS 145 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP--RSCQSILMSATSSPDIDKL 357 + + ++LDEAD+LL+ +DLK V +P Q++L +AT + + L Sbjct: 146 GDDTVGGLKRVKYLVLDEADILLTETFSNDLKTCVGALPPKEKRQTLLFTATITDQVRAL 205 Query: 358 TKLLLHN-PFVLTLTEVGHAKDDVVPK--NVQQFWISCSAKDXXXXXXXXXXXXXXXXXV 528 + L EV + + +P N + + K+ + Sbjct: 206 QDAPVQKGKQPLFCYEVENVDNVAIPSTLNTEYVLVPEHVKEAYLYQLLTCESYANSTAI 265 Query: 529 LIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 IFVN A LR L+ +R A L++++PQ R + + F A LIAT Sbjct: 266 -IFVNRTTAAEVLRRTLKALDVRVASLHSQMPQQERTNSMHRFRANAARVLIAT 318
>DBP4_CANAL (Q5AF95) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 765 Score = 54.3 bits (129), Expect = 3e-07 Identities = 32/111 (28%), Positives = 64/111 (57%), Gaps = 3/111 (2%) Frame = +1 Query: 133 NILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQ 312 NILV TP ++ +++ + +S +L +++LDEAD L + + ++ H+P + Q Sbjct: 171 NILVGTPGRISQHLNEAVGMETS---NLQVLVLDEADRCLDMGFKKQIDNILGHLPTTRQ 227 Query: 313 SILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVV---PKNVQQFWI 456 ++L SAT S ++ L +L L NP ++G + D V P++++Q+++ Sbjct: 228 TLLFSATQSESVNDLARLSLTNP-----NKIGVSSDQEVSATPESLEQYYV 273
>IF4A_EMENI (Q5B948) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 421 Score = 54.3 bits (129), Expect = 3e-07 Identities = 46/197 (23%), Positives = 88/197 (44%) Frame = +1 Query: 100 KDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLK 279 +D AL P I+V TP + I + +++ +K M ILDEAD +LS + + Sbjct: 157 RDDMNALREGPQIVVGTPGRIHDMIQRRVLKTDQMK----MFILDEADEMLSRGFTEQIY 212 Query: 280 ALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWIS 459 + +P+S Q +L+SAT D+ ++T + +P + + K ++ + ++QF+I+ Sbjct: 213 DIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILV-----KKQELTLEGIKQFYIA 267 Query: 460 CSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRL 639 ++ +IF N+ L L + ++ ++ Q R Sbjct: 268 VEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRD 327 Query: 640 HIIEAFNARLFDYLIAT 690 I++ F + LIAT Sbjct: 328 VIMKEFRSGSSRVLIAT 344
>DRS1_USTMA (Q4P9P3) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 932 Score = 54.3 bits (129), Expect = 3e-07 Identities = 55/259 (21%), Positives = 101/259 (38%), Gaps = 30/259 (11%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q Y+ S+ + + + S+ ++ +L L P +++ TP + + Sbjct: 419 ELAIQCYSVGKSIAKFTDIRFCLCVGGLSVKSQEAELKLR--PEVVIATPGRLIDHVRNS 476 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSC-QSILMSATSSPDIDKLT 360 S + + ++++DEAD +L D+L +V P+ Q++L SAT + D+++L Sbjct: 477 ---ASFTLDDIEILVMDEADRMLEDGFADELNEIVKSCPKGARQTMLFSATMTDDVEQLV 533 Query: 361 KLLLHNPFVLTLTEVGHAKDDVVPKNVQQF--------------------------WISC 462 +L L P L + K K +Q+F WIS Sbjct: 534 RLSLKRPVRLFV----DPKRTTAKKLIQEFVRVRGTGTGGVAGADGLSGIQDQPATWISG 589 Query: 463 SAKDXXX---XXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNS 633 K +IFV S A +L++ + + L+ +L Q Sbjct: 590 GRKSEDAQRPALLLSLCTRTFTSQTMIFVRSKKLAHQLKIVFGLLGLSAGELHGDLSQEQ 649 Query: 634 RLHIIEAFNARLFDYLIAT 690 R+ + F D+L+AT Sbjct: 650 RIDALTDFRDGKTDFLLAT 668
>DD19A_MOUSE (Q61655) ATP-dependent RNA helicase DDX19A (EC 3.6.1.-) (DEAD box| protein 19A) (DEAD box RNA helicase DEAD5) (mDEAD5) (Eukaryotic translation initiation factor 4A-related sequence 1) Length = 478 Score = 53.9 bits (128), Expect = 5e-07 Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 2/187 (1%) Frame = +1 Query: 136 ILVTTPACVAACISK-GIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHI-PRSC 309 I++ TP V SK + IK + +LDEAD++++ + D + I PR+C Sbjct: 212 IVIGTPGTVLDWCSKLKFIDPKKIK----VFVLDEADVMIATQGHQDQSIRIQRIVPRNC 267 Query: 310 QSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXX 489 Q +L SAT + K + ++ +P ++ L +++ ++Q+++ C+ ++ Sbjct: 268 QMLLFSATFEDSVWKFAQKVVPDPNIIKL-----KREEETLDTIKQYYVLCNNREEKFQA 322 Query: 490 XXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARL 669 +IF ++ A L L K + A+L+ E+ R +IE F Sbjct: 323 LCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGK 382 Query: 670 FDYLIAT 690 L+ T Sbjct: 383 EKVLVTT 389
>DRS1_SCHPO (Q09903) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 754 Score = 53.9 bits (128), Expect = 5e-07 Identities = 51/230 (22%), Positives = 100/230 (43%), Gaps = 1/230 (0%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q ++ A+ + + + + +S K + L P+I++ TP + Sbjct: 341 ELAMQCHSVATKIASF--TDIMVCLCIGGLSLKLQEQELRKRPDIVIATPGRFIDHMRNS 398 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 QG ++ E++ +M++DEAD +L D+L ++ P+S Q++L SAT + +D L + Sbjct: 399 --QGFTV-ENIEIMVMDEADRMLEDGFADELNEIIQACPKSRQTMLFSATMTDKVDDLIR 455 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQF-WISCSAKDXXXXXXXXXXXXXXXXXVLIFV 540 L L+ P + + K Q+F + + +IF Sbjct: 456 LSLNRPVRVFVDN----KKTTAKLLTQEFVRVRPQRELLRPAMLIYLCKELFHRRTIIFF 511 Query: 541 NSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 S A ++R+ ++ + ++ L Q R+ +E F +YL+AT Sbjct: 512 RSKAFAHKMRVIFGLLSLNATEIHGSLSQEQRVRALEDFRDGKCNYLLAT 561
>DBP4_SCHPO (Q9UTP9) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 735 Score = 53.9 bits (128), Expect = 5e-07 Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 1/110 (0%) Frame = +1 Query: 133 NILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQ 312 NILV TP + I + + +S L M+ILDEAD +L L A+V +P Q Sbjct: 162 NILVCTPGRLLQHIDQAVNFDTS---GLQMLILDEADRILDMGFRTTLDAIVSSLPVHRQ 218 Query: 313 SILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKD-DVVPKNVQQFWIS 459 ++L SAT + + L +L L NP +++ H D P N+ QF+++ Sbjct: 219 TMLFSATQTKSVKDLARLSLQNPDFISV----HENDTSSTPSNLNQFYLT 264
>DRS1_KLULA (Q6CJV1) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 748 Score = 53.9 bits (128), Expect = 5e-07 Identities = 44/192 (22%), Positives = 82/192 (42%) Frame = +1 Query: 115 ALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPH 294 AL P+I++ TP + S +S+ ++++DEAD +L +++L+ ++ Sbjct: 351 ALKTRPDIVIATPGRFIDHLRNS---ASFSVDSVEILVIDEADRMLEEGFQEELQEIMSL 407 Query: 295 IPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKD 474 IP Q++L SAT + I +L L L P + + A D + + + + K Sbjct: 408 IPSKRQTLLFSATMNSKIKQLISLSLKKPVRIMIDPPKQAADKLTQEFI-RIRKRDHLKP 466 Query: 475 XXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEA 654 +++FV + A +LR+ L ++ L+ L Q RL + Sbjct: 467 ALLYQLIRKLDNTSQKRIVVFVARKETAHKLRIVLGLLGMQVGELHGSLTQEQRLQSVNN 526 Query: 655 FNARLFDYLIAT 690 F + LI T Sbjct: 527 FKSLQVPVLICT 538
>YOQ2_CAEEL (P34640) Putative ATP-dependent RNA helicase ZK512.2 in chromosome| III (EC 3.6.1.-) Length = 578 Score = 53.9 bits (128), Expect = 5e-07 Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 1/158 (0%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMS-DKDIKLALSGPPNILVTTPACVAACISK 180 ELC Q+ + E L + VT DK+IK+ + NILV TP + I Sbjct: 91 ELCSQIVSVIQPFAEKLN--LTVETVTGGQKVDKNIKMFKNKNVNILVATPGRLFQIIQH 148 Query: 181 GIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLT 360 + +L ++++DEAD + ED ++ ++ IP+ ++ L SAT + D L Sbjct: 149 EKTLIARKMRTLQLLVIDEADRFNEIQFEDHMREILSCIPKQRRTGLFSATQVKEEDDLM 208 Query: 361 KLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKD 474 L N +V ++ P ++ +++ C A + Sbjct: 209 VFGLRN---AKQVKVAQERNSAAPSTLKNYYVECRADE 243
>IF4A1_MACFA (Q4R8K5) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 53.5 bits (127), Expect = 6e-07 Identities = 41/187 (21%), Positives = 85/187 (45%) Frame = +1 Query: 130 PNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSC 309 P+I+V TP V +++ + IK M +LDEAD +LS +D + + + + Sbjct: 152 PHIIVGTPGRVFDMLNRRYLSPKYIK----MFVLDEADEMLSRGFKDQIYDIFQKLNSNT 207 Query: 310 QSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXX 489 Q +L+SAT D+ ++TK + +P + + K+++ + ++QF+I+ ++ Sbjct: 208 QVVLLSATMPSDVLEVTKKFMRDPIRILV-----KKEELTLEGIRQFYINVEREEWKLDT 262 Query: 490 XXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARL 669 +IF+N+ L + ++ ++ ++ Q R I+ F + Sbjct: 263 LCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTASAMHGDMDQKERDVIMREFRSGS 322 Query: 670 FDYLIAT 690 LI T Sbjct: 323 SRVLITT 329
>FAL1_CANGA (Q6FJG1) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 399 Score = 53.5 bits (127), Expect = 6e-07 Identities = 47/231 (20%), Positives = 104/231 (45%), Gaps = 2/231 (0%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q+ ++L + K + +M D D+K ++ TP V I + Sbjct: 102 ELAAQIGKVVTNLGDYMNVKAYAMTGGKTMKD-DLKKIQKHGCQVISGTPGRVLDMIKRR 160 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRC--EDDLKALVPHIPRSCQSILMSATSSPDIDKL 357 +++ ++ +++LDEAD LLS + + + +PR+ Q +++SAT SP+I ++ Sbjct: 161 LIETRHVQ----ILVLDEADELLSDTLGFKHQIYDIFTKLPRTSQVVVVSATMSPEILEI 216 Query: 358 TKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIF 537 TK +++P + + +D++ + ++Q++++ ++ +IF Sbjct: 217 TKKFMNDPVKILV-----KRDEITLEGIKQYYVNVEKEEWKFDTLCDIYDSLTITQCVIF 271 Query: 538 VNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 NS L L++ ++ ++ Q+ R ++ F LI+T Sbjct: 272 CNSKKKVDWLAHKLKQSNFAVISMHGDMKQDERDRVMNEFRTGQSRVLIST 322
>DBP4_GIBZE (Q4IAS1) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 793 Score = 53.5 bits (127), Expect = 6e-07 Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 5/191 (2%) Frame = +1 Query: 133 NILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQ 312 NILV TP + + +L +++LDEAD ++ + + AL+ H+PR Q Sbjct: 174 NILVCTPGRMLQHFDQ---TAGFDANNLQILVLDEADRIMDMGFQSAVDALIEHLPRERQ 230 Query: 313 SILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXX 492 +++ SAT S + L +L L +P +++ E A P N+QQ +I + Sbjct: 231 TLMFSATQSKKVSDLARLSLKDPEYVSVHE---AAVSATPTNLQQHYIVTPLTE-KLDTL 286 Query: 493 XXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKF-----AIRSAVLNAELPQNSRLHIIEAF 657 +++F++S ++R E F I L+ Q +R+ I F Sbjct: 287 YGFIKANLKSKIIVFLSS---GKQVRFVYESFRHLQPGIPLLHLHGRQKQGARMEITSRF 343 Query: 658 NARLFDYLIAT 690 A L AT Sbjct: 344 TAAKQTCLFAT 354
>SPB4_ASPOR (Q2UBZ5) ATP-dependent rRNA helicase spb4 (EC 3.6.1.-)| Length = 638 Score = 53.5 bits (127), Expect = 6e-07 Identities = 34/122 (27%), Positives = 66/122 (54%), Gaps = 2/122 (1%) Frame = +1 Query: 100 KDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLK 279 +D+ L PN+LV+TP + +S V + S M++LDEAD LL ++ L+ Sbjct: 155 EDLSKFLKQSPNLLVSTPGRLLELLSSPHVHCP--QSSFEMLVLDEADRLLDLGFKETLQ 212 Query: 280 ALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVG--HAKDDVVPKNVQQFW 453 ++ +P+ ++ L SA+ S +D++ ++ L NP + + G A+D P ++Q + Sbjct: 213 NIIRRLPKQRRTGLFSASISEAVDQIVRVGLRNPVKVMVKVKGTSGAQDKRTPASLQMTY 272 Query: 454 IS 459 ++ Sbjct: 273 LT 274
>IF4A_LEIBR (Q25225) Probable eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 403 Score = 53.5 bits (127), Expect = 6e-07 Identities = 51/231 (22%), Positives = 101/231 (43%), Gaps = 2/231 (0%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQ--VTASMSDKDIKLALSGPPNILVTTPACVAACIS 177 EL Q S + E ++ K + V + D++ +G + V TP V+ I Sbjct: 105 ELALQTAEVISRIGEFLSNSAKFCETFVGGTRVQDDLRKLQAGVV-VAVGTPGRVSDVIK 163 Query: 178 KGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKL 357 +G ++ ESL +++LDEAD +LS D + + +P+ Q L SAT ++ +L Sbjct: 164 RGALR----TESLRVLVLDEADEMLSQGFADQIYEIFRFLPKDIQVALFSATMPEEVLEL 219 Query: 358 TKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIF 537 TK + +P + + ++ + + ++QF+I+ + V IF Sbjct: 220 TKKFMRDPVRILV-----KRESLTLEGIKQFFIAVEEEHKLDTLMDLYETVSIAQSV-IF 273 Query: 538 VNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 N+ + L + + ++AE+P++ R ++ F + L+ T Sbjct: 274 ANTRRKVDWIAEKLNQSNHTVSSMHAEMPKSDRERVMNTFRSGSSRVLVTT 324
>IF4A_ASHGO (Q75BL8) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation initiation factor 1) Length = 396 Score = 53.1 bits (126), Expect = 8e-07 Identities = 46/192 (23%), Positives = 84/192 (43%) Frame = +1 Query: 115 ALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPH 294 AL I+V TP V I + + IK M ILDEAD +LS ++ + + Sbjct: 136 ALRAGAQIVVGTPGRVFDMIERRNFKTDHIK----MFILDEADEMLSSGFKEQIYKIFTM 191 Query: 295 IPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKD 474 +P + Q +L+SAT ++ +T ++ P + + KD + + +QQ++I+ +++ Sbjct: 192 LPPTTQVVLLSATMPKEVLDVTDKFMNKPVRILV-----KKDALTLEGIQQYYINVESEE 246 Query: 475 XXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEA 654 +IF N+ L L + + + ++LPQ R I++ Sbjct: 247 YKYDCLSDLYDSISVTQAVIFCNTRRKVEELTKRLTDDSFTVSAIYSDLPQAQRDTIMKE 306 Query: 655 FNARLFDYLIAT 690 F LI+T Sbjct: 307 FRTGSSRILIST 318
>DDX10_MOUSE (Q80Y44) Probable ATP-dependent RNA helicase DDX10 (EC 3.6.1.-)| (DEAD box protein 10) Length = 875 Score = 53.1 bits (126), Expect = 8e-07 Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 1/187 (0%) Frame = +1 Query: 133 NILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQ 312 NILV TP + + + I ++ +L M++LDEAD +L D + A++ ++P+ Q Sbjct: 192 NILVCTPGRLLQHMDETICFHAT---NLQMLVLDEADRILDMGFADTMNAIIENLPKKRQ 248 Query: 313 SILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXX 492 ++L SAT + + L +L L +P + + E P ++Q +I C Sbjct: 249 TLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKYS---TPATLEQNYIICELHQKISVLF 305 Query: 493 XXXXXXXXXXXVLIFVNSIDNAFRLRLFLE-KFAIRSAVLNAELPQNSRLHIIEAFNARL 669 ++ F + + + R+F + I L+ Q R+ + F + Sbjct: 306 SFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNEFVRKR 365 Query: 670 FDYLIAT 690 L AT Sbjct: 366 AAVLFAT 372
>IF4A2_PONPY (Q5R4X1) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 407 Score = 53.1 bits (126), Expect = 8e-07 Identities = 43/187 (22%), Positives = 84/187 (44%) Frame = +1 Query: 130 PNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSC 309 P+I+V TP V +++ + IK M +LDEAD +LS +D + + + S Sbjct: 153 PHIVVGTPGRVFDMLNRRYLSPKWIK----MFVLDEADEMLSRGFKDQIYEIFQKLNTSI 208 Query: 310 QSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXX 489 Q +L+SAT D+ ++TK + +P + + K+++ + ++QF+I+ ++ Sbjct: 209 QVVLLSATMPTDVLEVTKKFMRDPIRILV-----KKEELTLEGIKQFYINVEREEWKLDT 263 Query: 490 XXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARL 669 +IF+N+ L + + L+ ++ Q R I+ F + Sbjct: 264 LCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGS 323 Query: 670 FDYLIAT 690 LI T Sbjct: 324 SRVLITT 330
>IF4A2_MOUSE (P10630) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 407 Score = 53.1 bits (126), Expect = 8e-07 Identities = 43/187 (22%), Positives = 84/187 (44%) Frame = +1 Query: 130 PNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSC 309 P+I+V TP V +++ + IK M +LDEAD +LS +D + + + S Sbjct: 153 PHIVVGTPGRVFDMLNRRYLSPKWIK----MFVLDEADEMLSRGFKDQIYEIFQKLNTSI 208 Query: 310 QSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXX 489 Q +L+SAT D+ ++TK + +P + + K+++ + ++QF+I+ ++ Sbjct: 209 QVVLLSATMPTDVLEVTKKFMRDPIRILV-----KKEELTLEGIKQFYINVEREEWKLDT 263 Query: 490 XXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARL 669 +IF+N+ L + + L+ ++ Q R I+ F + Sbjct: 264 LCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGS 323 Query: 670 FDYLIAT 690 LI T Sbjct: 324 SRVLITT 330
>IF4A2_HUMAN (Q14240) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 407 Score = 53.1 bits (126), Expect = 8e-07 Identities = 43/187 (22%), Positives = 84/187 (44%) Frame = +1 Query: 130 PNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSC 309 P+I+V TP V +++ + IK M +LDEAD +LS +D + + + S Sbjct: 153 PHIVVGTPGRVFDMLNRRYLSPKWIK----MFVLDEADEMLSRGFKDQIYEIFQKLNTSI 208 Query: 310 QSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXX 489 Q +L+SAT D+ ++TK + +P + + K+++ + ++QF+I+ ++ Sbjct: 209 QVVLLSATMPTDVLEVTKKFMRDPIRILV-----KKEELTLEGIKQFYINVEREEWKLDT 263 Query: 490 XXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARL 669 +IF+N+ L + + L+ ++ Q R I+ F + Sbjct: 264 LCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGS 323 Query: 670 FDYLIAT 690 LI T Sbjct: 324 SRVLITT 330
>RHLB_IDILO (Q5QYF8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 425 Score = 53.1 bits (126), Expect = 8e-07 Identities = 55/231 (23%), Positives = 103/231 (44%), Gaps = 2/231 (0%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q+ ++A +L+E C K+ ++ + K L+ P+ILV T + + Sbjct: 94 ELAIQIAHDADALIEHCGLKMGVIYGGEGYEGQ--KEQLAAQPDILVGTTGRLIDFYKQD 151 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQ--SILMSATSSPDIDKL 357 + S+K+ + +++LDEAD + DD++ L+ +P + ++L SAT S + +L Sbjct: 152 LF---SLKD-IEVVVLDEADRMFDLGFIDDIRYLLQKMPDPSKRLNLLFSATLSYRVQEL 207 Query: 358 TKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIF 537 ++ P T EV + + F+ S K ++F Sbjct: 208 AYEHMNAP---TKLEVEPLQKTATRVTEELFYPS---KPEKFPLLLTLIEEDWPDKAIVF 261 Query: 538 VNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 N+ ++ +L R+ +L ++PQ RL I+E F D+L+AT Sbjct: 262 ANTKHGCEKVHGWLVANEHRAGLLTGDVPQKKRLRILEDFAEGKLDFLVAT 312
>DBP4_ASHGO (Q75C76) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 763 Score = 53.1 bits (126), Expect = 8e-07 Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 3/160 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALS--GPPNILVTTPACVAACIS 177 EL Q+Y + + + +V + KD+K + NIL+ TP + + Sbjct: 124 ELAMQIYEVLVKIGKYMSFSAGLV-----IGGKDVKFEMERVSKINILIGTPGRLLQHMD 178 Query: 178 KGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKL 357 + + +S +L +++LDEAD L + L A+V ++P S Q++L SAT S + L Sbjct: 179 QSVGLNTS---NLQILVLDEADRCLDMGFKKALDAIVSNLPPSRQTLLFSATQSQSLADL 235 Query: 358 TKLLLHN-PFVLTLTEVGHAKDDVVPKNVQQFWISCSAKD 474 +L L + V T+ P+N++QF+I + D Sbjct: 236 ARLSLADYKTVGTMDGPSSKNKPATPENLEQFYIQVALPD 275
>DBP4_ASPFU (Q4WM60) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 787 Score = 53.1 bits (126), Expect = 8e-07 Identities = 38/151 (25%), Positives = 72/151 (47%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q++ + T +V S+ ++ +L G NILV TP + + + Sbjct: 130 ELAIQIFEVLRKIGRYHTFSAGLVIGGKSLKEEQERL---GRMNILVCTPGRMLQHLDQT 186 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 + + +L M++LDEAD +L + + A++ H+P+ Q++L SAT + + L + Sbjct: 187 ALFDTY---NLQMLVLDEADRILDLGFQQTVDAIIGHLPKERQTLLFSATQTKKVSDLAR 243 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWI 456 L L +P + + E P +QQ ++ Sbjct: 244 LSLQDPEYVAVHETA---SSATPSKLQQHYV 271
>RRP3_CRYNE (Q5KBE2) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 484 Score = 52.8 bits (125), Expect = 1e-06 Identities = 54/230 (23%), Positives = 102/230 (44%), Gaps = 1/230 (0%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q+ + +SL + ++ M + I ALS P+I+V TP + + Sbjct: 117 ELAYQISQQVTSLGSGIGVRTAVLVGGMDMMSQSI--ALSKRPHIIVATPGRLMDHLEN- 173 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 +G S+K SL +++DEAD LL + ++ IP+ + L SAT + + KL + Sbjct: 174 -TKGFSLK-SLKYLVMDEADRLLDLDFGPIIDKILKVIPKERNTYLFSATMTTKVAKLQR 231 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQF-WISCSAKDXXXXXXXXXXXXXXXXXVLIFV 540 L+ P + ++ +K V +Q + + KD ++IF Sbjct: 232 ASLNKPVRVEVS----SKYSTVSTLLQHYLLLPLKNKD---AYLLYLANELSSSSMMIFT 284 Query: 541 NSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 ++ ++ RL + L + + L+ ++ Q+ RL + F + L+AT Sbjct: 285 RTVADSQRLSIILRRLGFPAIPLHGQMTQSLRLASLNKFKSGGRSILVAT 334
>DBP5_KLULA (Q6CJU1) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 469 Score = 52.8 bits (125), Expect = 1e-06 Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 1/187 (0%) Frame = +1 Query: 133 NILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYR-CEDDLKALVPHIPRSC 309 NI+V TP V I + ++ SIK + +LDEAD +L + D + +P++C Sbjct: 197 NIVVGTPGTVLDLIRRKMLNLGSIK----VFVLDEADNMLDKQGLGDQCIRVKKFLPKTC 252 Query: 310 QSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXX 489 Q +L SAT + + K ++ L L K++V ++Q ++ C ++ Sbjct: 253 QLVLFSATFDDGVRQYAKKIIPTAVSLEL-----QKNEVNVSAIKQLFMDCDNEEHKYTI 307 Query: 490 XXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARL 669 +IFV + A L L+K + ++L+ +L R +I+ F Sbjct: 308 LSELYGLLTIGSSIIFVKTKQTANLLYAKLKKEGHQVSILHGDLQSQDRDRLIDDFREGR 367 Query: 670 FDYLIAT 690 LI T Sbjct: 368 SKVLITT 374
>IF4A2_MACFA (Q4R4Y9) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 408 Score = 52.8 bits (125), Expect = 1e-06 Identities = 43/187 (22%), Positives = 84/187 (44%) Frame = +1 Query: 130 PNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSC 309 P+I+V TP V +++ + IK M +LDEAD +LS +D + + + S Sbjct: 154 PHIVVGTPGRVFDMLNRRYLSPKWIK----MFVLDEADGMLSRGFKDQIYEIFQKLNTSI 209 Query: 310 QSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXX 489 Q +L+SAT D+ ++TK + +P + + K+++ + ++QF+I+ ++ Sbjct: 210 QVVLLSATMPTDVLEVTKKFMRDPIRILV-----KKEELTLEGIKQFYINVEREEWKLDT 264 Query: 490 XXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARL 669 +IF+N+ L + + L+ ++ Q R I+ F + Sbjct: 265 LCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGS 324 Query: 670 FDYLIAT 690 LI T Sbjct: 325 SRVLITT 331
>IF4A1_PONPY (Q5R5F5) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 52.4 bits (124), Expect = 1e-06 Identities = 41/187 (21%), Positives = 84/187 (44%) Frame = +1 Query: 130 PNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSC 309 P+I+V TP V +++ + IK M +LDEAD +LS +D + + + + Sbjct: 152 PHIIVGTPGRVFDMLNRRYLSPKYIK----MFVLDEADEMLSRGFKDQIYDIFQKLNSNT 207 Query: 310 QSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXX 489 Q +L+SAT D+ ++TK + +P + + K+++ + ++QF+I+ ++ Sbjct: 208 QVVLLSATMPSDVLEVTKKFMRDPIRILV-----KKEELTLEGIRQFYINVEREEWKLDT 262 Query: 490 XXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARL 669 +IF+N+ L + + ++ ++ Q R I+ F + Sbjct: 263 LCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGS 322 Query: 670 FDYLIAT 690 LI T Sbjct: 323 SRVLITT 329
>IF4A1_MOUSE (P60843) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 52.4 bits (124), Expect = 1e-06 Identities = 41/187 (21%), Positives = 84/187 (44%) Frame = +1 Query: 130 PNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSC 309 P+I+V TP V +++ + IK M +LDEAD +LS +D + + + + Sbjct: 152 PHIIVGTPGRVFDMLNRRYLSPKYIK----MFVLDEADEMLSRGFKDQIYDIFQKLNSNT 207 Query: 310 QSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXX 489 Q +L+SAT D+ ++TK + +P + + K+++ + ++QF+I+ ++ Sbjct: 208 QVVLLSATMPSDVLEVTKKFMRDPIRILV-----KKEELTLEGIRQFYINVEREEWKLDT 262 Query: 490 XXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARL 669 +IF+N+ L + + ++ ++ Q R I+ F + Sbjct: 263 LCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGS 322 Query: 670 FDYLIAT 690 LI T Sbjct: 323 SRVLITT 329
>IF4A1_HUMAN (P60842) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 52.4 bits (124), Expect = 1e-06 Identities = 41/187 (21%), Positives = 84/187 (44%) Frame = +1 Query: 130 PNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSC 309 P+I+V TP V +++ + IK M +LDEAD +LS +D + + + + Sbjct: 152 PHIIVGTPGRVFDMLNRRYLSPKYIK----MFVLDEADEMLSRGFKDQIYDIFQKLNSNT 207 Query: 310 QSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXX 489 Q +L+SAT D+ ++TK + +P + + K+++ + ++QF+I+ ++ Sbjct: 208 QVVLLSATMPSDVLEVTKKFMRDPIRILV-----KKEELTLEGIRQFYINVEREEWKLDT 262 Query: 490 XXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARL 669 +IF+N+ L + + ++ ++ Q R I+ F + Sbjct: 263 LCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGS 322 Query: 670 FDYLIAT 690 LI T Sbjct: 323 SRVLITT 329
>IF4A1_RABIT (P29562) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) (Fragment) Length = 398 Score = 52.4 bits (124), Expect = 1e-06 Identities = 41/187 (21%), Positives = 84/187 (44%) Frame = +1 Query: 130 PNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSC 309 P+I+V TP V +++ + IK M +LDEAD +LS +D + + + + Sbjct: 144 PHIIVGTPGRVFDMLNRRYLSPKYIK----MFVLDEADEMLSRGFKDQIYDIFQKLNSNT 199 Query: 310 QSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXX 489 Q +L+SAT D+ ++TK + +P + + K+++ + ++QF+I+ ++ Sbjct: 200 QVVLLSATMPSDVLEVTKKFMRDPIRILV-----KKEELTLEGIRQFYINVEREEWKLDT 254 Query: 490 XXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARL 669 +IF+N+ L + + ++ ++ Q R I+ F + Sbjct: 255 LCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGS 314 Query: 670 FDYLIAT 690 LI T Sbjct: 315 SRVLITT 321
>DDX6_MOUSE (P54823) Probable ATP-dependent RNA helicase DDX6 (EC 3.6.1.-)| (DEAD box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK homolog) Length = 483 Score = 52.4 bits (124), Expect = 1e-06 Identities = 44/208 (21%), Positives = 86/208 (41%) Frame = +1 Query: 67 KIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADL 246 K++ T + +D + L ++++ TP + I KG+ + ++ M++LDEAD Sbjct: 195 KVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQ----MIVLDEADK 250 Query: 247 LLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDV 426 LLS ++ ++ +P++ Q +L SAT + K L P+ + L E ++ Sbjct: 251 LLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLME------EL 304 Query: 427 VPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAV 606 K V Q++ + + + IF NS L + + Sbjct: 305 TLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSI-IFCNSSQRVELLAKKISQLGYSCFY 363 Query: 607 LNAELPQNSRLHIIEAFNARLFDYLIAT 690 ++A++ Q R + F L L+ T Sbjct: 364 IHAKMRQEHRNRVFHDFRNGLCRNLVCT 391
>DDX6_HUMAN (P26196) Probable ATP-dependent RNA helicase DDX6 (EC 3.6.1.-)| (DEAD box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK) Length = 483 Score = 52.4 bits (124), Expect = 1e-06 Identities = 44/208 (21%), Positives = 86/208 (41%) Frame = +1 Query: 67 KIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADL 246 K++ T + +D + L ++++ TP + I KG+ + ++ M++LDEAD Sbjct: 195 KVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQ----MIVLDEADK 250 Query: 247 LLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDV 426 LLS ++ ++ +P++ Q +L SAT + K L P+ + L E ++ Sbjct: 251 LLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLEKPYEINLME------EL 304 Query: 427 VPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAV 606 K V Q++ + + + IF NS L + + Sbjct: 305 TLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSI-IFCNSSQRVELLAKKISQLGYSCFY 363 Query: 607 LNAELPQNSRLHIIEAFNARLFDYLIAT 690 ++A++ Q R + F L L+ T Sbjct: 364 IHAKMRQEHRNRVFHDFRNGLCRNLVCT 391
>RRP3_CANGA (Q6FNK8) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 493 Score = 52.4 bits (124), Expect = 1e-06 Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 7/236 (2%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQ+ SL L ++ + M+ D L P+I++ TP + + Sbjct: 152 ELAQQIKETFDSLGSLMG--VRTTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLEN- 208 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP-RSCQSILMSATSSPDIDKLT 360 +G S+K +L +++DEAD LL L ++ IP + + L SAT + IDKL Sbjct: 209 -TKGFSLK-NLKFLVMDEADRLLDMEFGPVLDRILKIIPTKGRTTYLFSATMTSKIDKLQ 266 Query: 361 KLLLHNPFVLTLTEVGHAKDD------VVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXX 522 + L NP ++ D VVP ++ ++ + Sbjct: 267 RASLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKNTFLIYLLNE------------FIGK 314 Query: 523 XVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 V+IF + NA RL + L+ +L QN R ++ F A L+AT Sbjct: 315 TVIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRTGALDLFKAGKRSILVAT 370
>DRS1_YARLI (Q6CEB8) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 753 Score = 52.4 bits (124), Expect = 1e-06 Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 2/163 (1%) Frame = +1 Query: 208 ESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFV 387 + + ++++DEAD +L + +L ++ +P+ Q++L SAT + I L +L L P Sbjct: 398 DDVEILVIDEADRMLEEGFQQELTEILTLLPKKRQTLLFSATMNSSISSLIQLSLSRPVR 457 Query: 388 LTLTEVGHAKDDVVPKNVQQFWISCSAKDXX--XXXXXXXXXXXXXXXVLIFVNSIDNAF 561 + + A +V Q ++ +D +IFV + A Sbjct: 458 VMINPPKQAASGLV-----QEFVRIRKRDHLKPALLASILKKMDKEQRTIIFVARKETAH 512 Query: 562 RLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 RLR+ L +R L+ L Q RL I AF L+ T Sbjct: 513 RLRIMLGLLGVRIGELHGALSQEQRLQSITAFKKLEVPILVCT 555
>DBP4_DEBHA (Q6BXG0) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 766 Score = 52.4 bits (124), Expect = 1e-06 Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 3/111 (2%) Frame = +1 Query: 133 NILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQ 312 NILV TP ++ +++ + +S +L +++LDEAD L + + ++ H+P + Q Sbjct: 169 NILVGTPGRISQHLNESVGMETS---NLQVLVLDEADRCLDMGFKKQIDNILGHLPPTRQ 225 Query: 313 SILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKD---DVVPKNVQQFWI 456 ++L SAT S + L +L L NP VG + D P++++Q++I Sbjct: 226 TLLFSATQSDSVKDLARLSLANP-----KRVGISSDQELSATPESLEQYYI 271
>DBP4_KLULA (Q6CRF4) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 770 Score = 52.4 bits (124), Expect = 1e-06 Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 3/160 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALS--GPPNILVTTPACVAACIS 177 EL Q+Y S + + T +V + KD+ NIL+ TP + + Sbjct: 124 ELAMQIYEVLSKIGKHTTFSAGLV-----IGGKDVTFEKERISRINILIGTPGRILQHMD 178 Query: 178 KGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKL 357 + + +S +L +++LDEAD L + L A++ ++P S Q++L SAT S +D L Sbjct: 179 QAVGFNTS---NLQLLVLDEADRCLDMGFKRTLDAIINNLPASRQTLLFSATQSQSLDDL 235 Query: 358 TKLLLHNPFVLTLTEVGHA-KDDVVPKNVQQFWISCSAKD 474 +L L + + EV +A P+++QQ +I D Sbjct: 236 ARLSLTDYKQVGTMEVLNANSSSATPESLQQSYIEVPLPD 275
>EXP9_STRR6 (P0A4D8) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)| (Exported protein 9) Length = 524 Score = 52.4 bits (124), Expect = 1e-06 Identities = 47/201 (23%), Positives = 89/201 (44%) Frame = +1 Query: 88 SMSDKDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCE 267 S +K IK SG +I+V TP + I + ++ + + +ILDEAD +L+ Sbjct: 107 SSIEKQIKALKSGA-HIVVGTPGRLLDLIKRKALK----LQDIETLILDEADEMLNMGFL 161 Query: 268 DDLKALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQ 447 +D++A++ +P + Q++L SAT I ++ + P V A ++ + V Q Sbjct: 162 EDIEAIISRVPENRQTLLFSATMPDAIKRIGVQFMKAP-----EHVKIAAKELTTELVDQ 216 Query: 448 FWISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQ 627 ++I ++ + +F + L L+ R+ ++ +L Q Sbjct: 217 YYIRVKEQEKFDTMTRLMDVAQPELAI-VFGRTKRRVDELTRGLKIRGFRAEGIHGDLDQ 275 Query: 628 NSRLHIIEAFNARLFDYLIAT 690 N RL ++ F D L+AT Sbjct: 276 NKRLRVLRDFKNGNLDVLVAT 296
>EXP9_STRPN (P0A4D7) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)| (Exported protein 9) Length = 524 Score = 52.4 bits (124), Expect = 1e-06 Identities = 47/201 (23%), Positives = 89/201 (44%) Frame = +1 Query: 88 SMSDKDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCE 267 S +K IK SG +I+V TP + I + ++ + + +ILDEAD +L+ Sbjct: 107 SSIEKQIKALKSGA-HIVVGTPGRLLDLIKRKALK----LQDIETLILDEADEMLNMGFL 161 Query: 268 DDLKALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQ 447 +D++A++ +P + Q++L SAT I ++ + P V A ++ + V Q Sbjct: 162 EDIEAIISRVPENRQTLLFSATMPDAIKRIGVQFMKAP-----EHVKIAAKELTTELVDQ 216 Query: 448 FWISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQ 627 ++I ++ + +F + L L+ R+ ++ +L Q Sbjct: 217 YYIRVKEQEKFDTMTRLMDVAQPELAI-VFGRTKRRVDELTRGLKIRGFRAEGIHGDLDQ 275 Query: 628 NSRLHIIEAFNARLFDYLIAT 690 N RL ++ F D L+AT Sbjct: 276 NKRLRVLRDFKNGNLDVLVAT 296
>DBP8_CANAL (Q59PR3) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 440 Score = 52.4 bits (124), Expect = 1e-06 Identities = 60/233 (25%), Positives = 94/233 (40%), Gaps = 4/233 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q+ + ++L +K+ V LAL P+ ++ TP +A I Sbjct: 80 ELALQIAEQFAALG--ANMNIKVAVVVGGEDFVQQTLALQRKPHFVIATPGRLADHILNS 137 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSC--QSILMSATSSPDIDKL 357 + S + ++LDEAD LLS DL+ +P S Q++L +AT + + L Sbjct: 138 GEETISGLRRVKYLVLDEADRLLSNSFGSDLQRCFDVLPTSDKRQTLLFTATITDAVRAL 197 Query: 358 T-KLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISC-SAKDXXXXXXXXXXXXXXXXXVL 531 K + + EV +P +Q ++ S + Sbjct: 198 KEKPPTPGKPPVFMHEVETVDKVAIPSTLQISYVFVPSYVKEAYLNSILHLEQFKDSTAV 257 Query: 532 IFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 IFVN A LR L K R A L++E+PQ+ R + + F A LIAT Sbjct: 258 IFVNRTTTAEVLRRMLRKLDFRVASLHSEMPQSERTNSLHRFKAGAARILIAT 310
>SUB2_SCHPO (O13792) ATP-dependent RNA helicase uap56 (EC 3.6.1.-)| Length = 434 Score = 52.0 bits (123), Expect = 2e-06 Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 1/180 (0%) Frame = +1 Query: 121 SGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLL-SYRCEDDLKALVPHI 297 S P+I+V TP + A + + I++ +S+K +LDE D LL S D++ + Sbjct: 171 SKSPHIVVATPGRLNALVREKILKVNSVKH----FVLDECDKLLESVDMRRDIQEVFRAT 226 Query: 298 PRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDX 477 P Q ++ SAT S +I + K + NP + + + + + +QQ ++ K Sbjct: 227 PPQKQVMMFSATLSNEIRPICKKFMQNPLEIYVDD----ETKLTLHGLQQHYVKLEEK-A 281 Query: 478 XXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAF 657 V+IFV S+ A L L + S ++ LPQ R+ +AF Sbjct: 282 KNRKINDLLDSLEFNQVVIFVKSVSRANELDRLLRECNFPSICIHGGLPQEERIKRYKAF 341
>DBP8_KLULA (Q6CXW0) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 435 Score = 52.0 bits (123), Expect = 2e-06 Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 5/234 (2%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q+ + ++ ++ IV S+ + I+L P+ ++ TP +A + Sbjct: 83 ELAMQIAEQFTAFGSAMNIRVAIVVGGESIVQQAIELQKR--PHFIIATPGRLAHHVLNS 140 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP--RSCQSILMSATSSPDIDKL 357 + + ++LDEAD+LL+ DL V +P Q++L +AT + + L Sbjct: 141 GEDTIGGLKRVKFLVLDEADILLTETFSKDLATCVSILPPKNKRQNLLFTATMTDQVKAL 200 Query: 358 TKL--LLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAK-DXXXXXXXXXXXXXXXXXV 528 + P V T EV + +PK ++ ++ Sbjct: 201 SDAPQTEGKPPVFTF-EVESVDNVAIPKTLETTYLLVPEHVKESYLYQILTSEKYVKSSC 259 Query: 529 LIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 +IFVN A LR L+ +R L++++PQ R + ++ F A+ LIAT Sbjct: 260 IIFVNRTVTAEILRRTLKSLDVRVTSLHSQMPQQERTNSVQRFRAQAARVLIAT 313
>SPB4_EMENI (Q5B8F4) ATP-dependent rRNA helicase spb4 (EC 3.6.1.-)| Length = 638 Score = 52.0 bits (123), Expect = 2e-06 Identities = 41/179 (22%), Positives = 79/179 (44%), Gaps = 27/179 (15%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVT-------------------------ASMSDKDI 108 EL Q+YN +SLL + ++ + ++ +D+ Sbjct: 98 ELASQIYNVLTSLLAFHPASAAVINTSETEDVPRPKHSSSVLRVVPQLLLGGSTSPAEDL 157 Query: 109 KLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALV 288 L PN+LV TP + +S V + S M++LDEAD LL ++ L+ ++ Sbjct: 158 STFLKRSPNLLVATPGRLLELLSSPHVYCP--QSSFEMLVLDEADRLLDLGFKETLQNIL 215 Query: 289 PHIPRSCQSILMSATSSPDIDKLTKLLLHNP--FVLTLTEVGHAKDDVVPKNVQQFWIS 459 +P+ ++ L SA+ S +D++ ++ L NP V+ + D P ++Q +++ Sbjct: 216 RRLPKQRRTGLFSASVSEAVDQIVRVGLRNPVKVVVKVKGASGVDDKRTPASLQMTYLT 274
>FAL1_DEBHA (Q6BT27) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 399 Score = 51.6 bits (122), Expect = 2e-06 Identities = 46/197 (23%), Positives = 87/197 (44%) Frame = +1 Query: 100 KDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLK 279 +DIK G I+ TP V I + + +IK MMILDEAD L++ ++ + Sbjct: 136 EDIKKLQQGQ-QIVSGTPGRVVDMIKRRNLATRNIK----MMILDEADELMTKGFKEQIY 190 Query: 280 ALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWIS 459 + ++P Q +++SAT S ++ ++T +P + + +DD+ + ++Q+ I Sbjct: 191 EIYRYLPPGVQVVVVSATLSREVLEVTGKFTTDPVKILV-----KRDDITLEGIKQYHIQ 245 Query: 460 CSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRL 639 C +D +IF N+ L ++K ++ ++ Q+ R Sbjct: 246 CEKEDWKFDTLCDLYDSLTITQAVIFCNTKVKVNWLTDQMKKANFTVVAMHGDMKQDERD 305 Query: 640 HIIEAFNARLFDYLIAT 690 I+ F LI+T Sbjct: 306 SIMNDFRTGNSRVLIST 322
>DBP4_ASPOR (Q2UHB7) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 796 Score = 51.6 bits (122), Expect = 2e-06 Identities = 38/151 (25%), Positives = 71/151 (47%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q++ + T ++ S+ ++ +L G NILV TP + + + Sbjct: 128 ELAIQIFEVLRKIGRYHTFSAGLIIGGKSLKEEQERL---GRMNILVCTPGRMLQHLDQT 184 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 + +L M++LDEAD +L + + A+V H+P+ Q++L SAT + + L + Sbjct: 185 AMFDVF---NLQMLVLDEADRILDMGFQKTVDAIVGHLPKERQTLLFSATQTKKVSDLAR 241 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWI 456 L L +P + + E P +QQ ++ Sbjct: 242 LSLQDPEYVAVHETA---SSATPSTLQQHYV 269
>PRP5_NEUCR (Q7SH33) Pre-mRNA-processing ATP-dependent RNA helicase prp-5 (EC| 3.6.1.-) Length = 1194 Score = 51.2 bits (121), Expect = 3e-06 Identities = 36/131 (27%), Positives = 65/131 (49%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 ELC Q+Y++ + KL++V + KD L I+V TP + ++ Sbjct: 645 ELCTQIYSDLQPFAKAL--KLRVVAAYGGNAIKDQIAELKRGAEIIVATPGRLIDLLAAN 702 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 + +++K + + ++LDEAD + E + + ++ Q+IL SAT ID LTK Sbjct: 703 GGRVTNLKRA-TYLVLDEADRMFDMGFEPQVMKIFNNVRPDRQTILFSATMPRIIDALTK 761 Query: 364 LLLHNPFVLTL 396 +L +P +T+ Sbjct: 762 KVLRDPVEITV 772
>DDX25_MOUSE (Q9QY15) ATP-dependent RNA helicase DDX25 (EC 3.6.1.-) (DEAD box| protein 25) (Gonadotropin-regulated testicular RNA helicase) Length = 484 Score = 51.2 bits (121), Expect = 3e-06 Identities = 41/187 (21%), Positives = 83/187 (44%), Gaps = 2/187 (1%) Frame = +1 Query: 136 ILVTTPACVAA-CISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPH-IPRSC 309 I++ TP V C + ++ + I+ + +LDEAD+++ + D + +P C Sbjct: 219 IIIGTPGTVLDWCFKRKLIDLTKIR----VFVLDEADVMIDTQGFSDQSIRIQRALPSEC 274 Query: 310 QSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXX 489 Q +L SAT + + + ++ +P V+ L K+++ N++Q+++ C + Sbjct: 275 QMLLFSATFEDSVWQFAERIIPDPNVIKL-----RKEELTLNNIRQYYVLCENRKGKYQA 329 Query: 490 XXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARL 669 +IF + NA L + + + + ++L+ EL R II+ F Sbjct: 330 LCNIYGGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVEQRASIIQRFRDGK 389 Query: 670 FDYLIAT 690 LI T Sbjct: 390 EKVLITT 396
>DBP8_SCHPO (Q9HGM5) ATP-dependent RNA helicase dbp8 (EC 3.6.1.-)| Length = 453 Score = 51.2 bits (121), Expect = 3e-06 Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 4/213 (1%) Frame = +1 Query: 64 LKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEAD 243 LK + M + LS P+++V TP +A I + + + +++DEAD Sbjct: 104 LKHALIVGGMDMIRQSIDLSKRPHVVVATPGRLADLIRSNGEETIAGLRRIKFLVMDEAD 163 Query: 244 LLLSYRCEDDLKALVPHIPRS--CQSILMSATSSPDIDKLT-KLLLHNPFVLTLTEVGHA 414 LLS DDL +P S Q++L +AT + I +L + +N L L EV Sbjct: 164 RLLSPTFADDLDDCFSVLPASEDRQTLLFTATVTDAIRQLKYQPQKNNKPPLWLYEV-ET 222 Query: 415 KDDVVPKNVQQFWISCSAK-DXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFA 591 + VP +QQ +I S++ +IFVN A + L Sbjct: 223 DNISVPSTLQQSYIFVSSQVREAYLVHLLTIPENAKKSAIIFVNRTRTAELIYSILRLLE 282 Query: 592 IRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 +R L++E+ Q R++ + F A L+AT Sbjct: 283 LRVTELHSEMVQRERINSLGRFRAEAAKILVAT 315
>DDX25_RAT (Q9QY16) ATP-dependent RNA helicase DDX25 (EC 3.6.1.-) (DEAD box| protein 25) (Gonadotropin-regulated testicular RNA helicase) Length = 483 Score = 50.8 bits (120), Expect = 4e-06 Identities = 41/187 (21%), Positives = 83/187 (44%), Gaps = 2/187 (1%) Frame = +1 Query: 136 ILVTTPACVAA-CISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPH-IPRSC 309 I++ TP V C + ++ + I+ + +LDEAD+++ + D + +P C Sbjct: 218 IVIGTPGTVLDWCFKRKLIDLTKIR----VFVLDEADVMIDTQGFSDQSIRIQRALPSEC 273 Query: 310 QSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXX 489 Q +L SAT + + + ++ +P V+ L K+++ N++Q+++ C + Sbjct: 274 QMLLFSATFEDSVWQFAERIIPDPNVIKL-----RKEELTLNNIRQYYVLCENRKDKYQA 328 Query: 490 XXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARL 669 +IF + NA L + + + + ++L+ EL R II+ F Sbjct: 329 LCNIYGGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVEQRASIIQRFRDGK 388 Query: 670 FDYLIAT 690 LI T Sbjct: 389 EKVLITT 395
>DRS1_CANGA (Q6FW42) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 725 Score = 50.8 bits (120), Expect = 4e-06 Identities = 45/187 (24%), Positives = 78/187 (41%) Frame = +1 Query: 130 PNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSC 309 P+I++ TP I S +S+ ++++DEAD +L +D+L ++ +P Sbjct: 329 PDIVIATPGRFIDHIRNS---ASFNVDSVEVLVIDEADRMLEDGFQDELNEIMSLLPSKR 385 Query: 310 QSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXX 489 Q++L SAT + I +L L L P + + A + + V + K Sbjct: 386 QTLLFSATMNSRIKQLISLSLKRPVRIMIDPPKQAATKLTQEFV-RIRKRDHLKPSLLFN 444 Query: 490 XXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARL 669 +++FV D A +LR+ L + A L+ L Q RL + F + Sbjct: 445 LIRKLDPNGQKRIVVFVARKDMAHKLRIILGLLGMAVAELHGSLTQEQRLDSVNKFKSLQ 504 Query: 670 FDYLIAT 690 LI T Sbjct: 505 VPVLICT 511
>RHLB_SHEON (Q8EJQ5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 439 Score = 50.8 bits (120), Expect = 4e-06 Identities = 55/231 (23%), Positives = 103/231 (44%), Gaps = 2/231 (0%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q+ +A L + ++LK+ V S + L +IL+ T + + +G Sbjct: 95 ELAIQIAKDAILLAK--HTRLKVGIVYGGESYDVQRKVLDQGVDILIGTTGRIIDYVRQG 152 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQ--SILMSATSSPDIDKL 357 I+ ++I+ ++LDEAD + D++ L +P + Q ++L SAT S + +L Sbjct: 153 IINLNAIQA----VVLDEADRMFDLGFIKDIRFLFRRMPNADQRLNMLFSATLSMKVQEL 208 Query: 358 TKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIF 537 +++P +V A ++ KN+++ S +D + +F Sbjct: 209 AYDHMNDP-----VKVEIAPEEKTSKNIKEEIFYPSQEDKMRLLLTLIEEDWPEKAI-VF 262 Query: 538 VNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 N+ + L +LE R +L ++PQ R+ I+E F D L+AT Sbjct: 263 SNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTQGQLDILVAT 313
>IF4A_CRYPV (O02494) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 405 Score = 50.8 bits (120), Expect = 4e-06 Identities = 48/229 (20%), Positives = 97/229 (42%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQ+ A +L + C +L+ S +D L +++V TP V + KG Sbjct: 110 ELAQQIQKVALALGDYC--ELRCHACVGGTSVRDDMNKLKSGVHMVVGTPGRVFDMLDKG 167 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 ++ ++K + ILDEAD +LS + + + +P+ Q L SAT +I LT Sbjct: 168 YLRVDNLK----LFILDEADEMLSRGFKVQIHDIFKKLPQDVQVALFSATMPNEILHLTT 223 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 + +P + + + +++ + ++QF++ + +I+ N Sbjct: 224 QFMRDPKRILVKQ-----EELTLEGIRQFYVGVEKDEWKMDTLIDLYETLTIVQAIIYCN 278 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 + +L + + + ++ ++ Q R I+ F + LI T Sbjct: 279 TRRRVDQLTKQMRERDFTCSSMHGDMDQKDREVIMRQFRSGSSRVLITT 327
>IF4A7_TOBAC (Q40470) Eukaryotic initiation factor 4A-7 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-7) (eIF-4A-7) Length = 413 Score = 50.4 bits (119), Expect = 5e-06 Identities = 51/232 (21%), Positives = 102/232 (43%), Gaps = 3/232 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQ+ +L + +K+ S ++ + L +++V TP V + + Sbjct: 119 ELAQQIEKVMRALGDYLG--VKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQ 176 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 ++ IK M +LDEAD +LS +D + + +P Q + SAT P+ ++T+ Sbjct: 177 SLRPDHIK----MFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITR 232 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 ++ P + + +DDV + ++QF+++ ++ +IFVN Sbjct: 233 KFMNKPVRILV-----KRDDVTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVN 287 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNA---ELPQNSRLHIIEAFNARLFDYLIAT 690 + ++ +K R ++A ++ QN+R I+ F + LI T Sbjct: 288 T---RRKVDWLTDKMRTRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 336
>DBP4_EMENI (Q5BFU1) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 812 Score = 50.4 bits (119), Expect = 5e-06 Identities = 38/151 (25%), Positives = 71/151 (47%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q++ + T +V S+ ++ +L G NILV TP + + + Sbjct: 131 ELAIQIFEVLRKIGRYHTFSAGLVIGGKSLKEEQERL---GRMNILVCTPGRMLQHLDQT 187 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 + +L M++LDEAD ++ + + A++ H+P Q++L SAT + + L + Sbjct: 188 AFFETY---NLQMLVLDEADRIMDMGFQKTVDAIIGHLPPERQTLLFSATQTKKVSDLAR 244 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWI 456 L L +P + + E A P +QQ ++ Sbjct: 245 LSLQDPEYVAVHE---AASSATPSKLQQHYV 272
>RRP3_YEAST (P38712) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-) (Ribosomal| RNA-processing protein RRP3) Length = 501 Score = 50.4 bits (119), Expect = 5e-06 Identities = 57/236 (24%), Positives = 97/236 (41%), Gaps = 7/236 (2%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQ+ SL L ++ + M+ D L P+I++ TP + + Sbjct: 160 ELAQQIKETFDSLGSLMG--VRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLEN- 216 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP-RSCQSILMSATSSPDIDKLT 360 +G S+++ L +++DEAD LL L ++ IP + + L SAT + IDKL Sbjct: 217 -TKGFSLRK-LKFLVMDEADRLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDKLQ 274 Query: 361 KLLLHNPFVLTLTEVGHAKDD------VVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXX 522 + L NP ++ D VVP ++ ++ + Sbjct: 275 RASLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKNTYLIYLLNE------------FIGK 322 Query: 523 XVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 ++IF + NA RL + L+ +L QN R+ ++ F A L+AT Sbjct: 323 TMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGSLDLFKAGKRSILVAT 378
>IF4A_MAIZE (Q41741) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 410 Score = 50.4 bits (119), Expect = 5e-06 Identities = 50/232 (21%), Positives = 104/232 (44%), Gaps = 3/232 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQ+ +L + +K+ S ++ + L+ +++V TP V + + Sbjct: 116 ELAQQIEKVMRALGDYLG--VKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQ 173 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 ++ +IK M +LDEAD +LS +D + + +P Q + SAT P+ ++T+ Sbjct: 174 SLRPDNIK----MFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITR 229 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 ++ P + + +D++ + ++QF+++ +D +IFVN Sbjct: 230 KFMNKPVRILV-----KRDELTLEGIKQFYVNIDKEDWKLDTLCDLYETLAITQSVIFVN 284 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNA---ELPQNSRLHIIEAFNARLFDYLIAT 690 + ++ +K R ++A ++ QN+R I+ F + LI T Sbjct: 285 T---RRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 333
>SPB4_GIBZE (Q4HVW2) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)| Length = 637 Score = 50.4 bits (119), Expect = 5e-06 Identities = 27/94 (28%), Positives = 54/94 (57%) Frame = +1 Query: 100 KDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLK 279 +D++ L PN+L+++P + +S V + S +++LDEAD LL + DL+ Sbjct: 153 QDLRFFLRHSPNVLISSPGRLVELMSSPHVHCP--QSSFEVLVLDEADRLLDLGFKPDLQ 210 Query: 280 ALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNP 381 ++ H+P+ ++ L SA+ S + ++ ++ L NP Sbjct: 211 KILSHLPKQRRTGLFSASVSEAVGEIIRVGLRNP 244
>DBP3_NEUCR (Q7S5R1) ATP-dependent RNA helicase dbp-3 (EC 3.6.1.-)| Length = 614 Score = 50.4 bits (119), Expect = 5e-06 Identities = 56/251 (22%), Positives = 103/251 (41%), Gaps = 22/251 (8%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q + S L L + + +++ L + +I+ TP + +S+G Sbjct: 268 ELAMQTHAALSGLASLVGLSAVCIFGGSDKNEQRNLLYKNNGVDIITATPGRLKDFLSEG 327 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP--RSCQSILMSATSSPDIDKL 357 + +++ S +LDEAD +L +D+K ++ P Q+++ +AT DI KL Sbjct: 328 SISLANV----SFAVLDEADRMLDRGFSEDIKLILSGCPPKEQRQTLMFTATWPLDIQKL 383 Query: 358 TKLLLHNPFVLTL---TEVG-----------------HAKDDVVPKNVQQFWISCSAKDX 477 + + NP +T+ T G K +VV ++F + K+ Sbjct: 384 AESYMINPAQVTIGHRTRAGGDGEGNGNIELQANSRIEQKVEVVDPRGKEFRLYELLKE- 442 Query: 478 XXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAF 657 +L+F A R+ FL + I+ A ++ +L Q+ R +EAF Sbjct: 443 ------AQKGSQKDDRILVFCLYKKEAVRVEQFLSRKGIKVASIHGDLRQDQRTRSLEAF 496 Query: 658 NARLFDYLIAT 690 + L+AT Sbjct: 497 KSGTTTVLVAT 507
>DBP80_DROME (O61305) DEAD-box helicase Dbp80 (EC 3.6.1.-)| Length = 460 Score = 50.4 bits (119), Expect = 5e-06 Identities = 48/234 (20%), Positives = 102/234 (43%), Gaps = 5/234 (2%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q A+ + + C +++ ++ +++ + +IL+ TP + + G Sbjct: 154 ELAIQTGEVAARMGQFCRE----IKLRFAVRGEEVDRSKKIEEHILIGTPGKL---LDWG 206 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDL-----KALVPHIPRSCQSILMSATSSPDI 348 I + +S+ +LDEAD++++ + D K L PH CQ + SAT ++ Sbjct: 207 IKFRLFDMKKISVFVLDEADVMIATQGHHDQCIRIHKMLNPH----CQMLFFSATYGKEV 262 Query: 349 DKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXV 528 +L++ +P ++ L +++ +N++Q+++ C ++ Sbjct: 263 MDFARLIVADPTIIRL-----MREEESLENIKQYYVKCKNEEGKYNAIQNIYGCISVGQA 317 Query: 529 LIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 +IF ++ A L + AVL +L RL +++ F + L LI T Sbjct: 318 IIFCHTKRTAAWLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRFRSGLEKVLITT 371
>DBP3_GIBZE (Q4IJH1) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 581 Score = 50.4 bits (119), Expect = 5e-06 Identities = 55/240 (22%), Positives = 96/240 (40%), Gaps = 11/240 (4%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q Y + +S+ L +++K V + S D + L+ +I+V TP + +S G Sbjct: 241 ELAMQTYEQMASVAAL--NRMKCVCLYGGASKDDQRNLLNRGADIIVATPGRLKDFMSDG 298 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP--RSCQSILMSATSSPDIDKL 357 V S + +LDEAD +L E+D+K ++ P Q+++ +AT + L Sbjct: 299 TVDLSHS----AFAVLDEADRMLDKGFEEDIKMILSSCPPREKRQTLMFTATWPQSVQTL 354 Query: 358 TKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAK---------DXXXXXXXXXXXX 510 + +P + + G + IS S + Sbjct: 355 AATFMVSPVKIAIGSGGKETAGGAVELQANARISQSVEVLEPRGKEFRLLEVLKEHQQGS 414 Query: 511 XXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 +L+F A R+ FL + IR ++ +L Q R +EAF + L+AT Sbjct: 415 KKNDRILVFCLYKKEATRIENFLSRKGIRVGGIHGDLRQEQRTRSLEAFKSGQTPVLVAT 474
>FAL1_YEAST (Q12099) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-) (Translation| initiation factor four A-like protein 1) Length = 399 Score = 50.1 bits (118), Expect = 7e-06 Identities = 42/185 (22%), Positives = 88/185 (47%), Gaps = 4/185 (2%) Frame = +1 Query: 148 TPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRC--EDDLKALVPHIPRSCQSIL 321 TP V I K ++Q +++ M++LDEAD LLS + + + +P++CQ ++ Sbjct: 149 TPGRVLDMIKKQMLQTRNVQ----MLVLDEADELLSETLGFKQQIYDIFAKLPKNCQVVV 204 Query: 322 MSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXX 501 +SAT + DI ++T+ +++P + + +D++ + ++Q+ ++ ++ Sbjct: 205 VSATMNKDILEVTRKFMNDPVKILV-----KRDEISLEGIKQYVVNVDKEEWKFDTLCDI 259 Query: 502 XXXXXXXXVLIFVNSIDNAFRL--RLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFD 675 +IF N+ L RL FA+ S ++ ++ Q R ++ F Sbjct: 260 YDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVS--MHGDMKQEERDKVMNDFRTGHSR 317 Query: 676 YLIAT 690 LI+T Sbjct: 318 VLIST 322
>FAL1_CANAL (Q5A9Z6) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 399 Score = 50.1 bits (118), Expect = 7e-06 Identities = 43/197 (21%), Positives = 87/197 (44%) Frame = +1 Query: 100 KDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLK 279 +D+K G I+ TP V I + +Q +IK ++ILDEAD L + ++ + Sbjct: 136 EDVKKLQQGQ-QIVSGTPGRVIDVIKRRNLQTRNIK----VLILDEADELFTKGFKEQIY 190 Query: 280 ALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWIS 459 + H+P S Q +++SAT ++ ++T +P + + +D++ ++Q+++ Sbjct: 191 EIYKHLPPSVQVVVVSATLPREVLEMTSKFTTDPVKILV-----KRDEISLSGIKQYYVQ 245 Query: 460 CSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRL 639 C +D +IF N+ L ++K ++ ++ Q+ R Sbjct: 246 CEREDWKFDTLCDLYDNLTITQAVIFCNTKLKVNWLADQMKKQNFTVVAMHGDMKQDERD 305 Query: 640 HIIEAFNARLFDYLIAT 690 I+ F LI+T Sbjct: 306 SIMNDFRRGNSRVLIST 322
>IF415_TOBAC (Q40468) Eukaryotic initiation factor 4A-15 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-15) (eIF-4A-15) Length = 413 Score = 50.1 bits (118), Expect = 7e-06 Identities = 50/232 (21%), Positives = 103/232 (44%), Gaps = 3/232 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQ+ +L + +K+ S ++ + LS +++V TP V + + Sbjct: 119 ELAQQIEKVMRALGDYLG--VKVTACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQ 176 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 ++ IK M +LDEAD +LS +D + + +P Q + SAT P+ ++T+ Sbjct: 177 SLRPDHIK----MFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITR 232 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 ++ P + + +D++ + ++QF+++ ++ +IFVN Sbjct: 233 KFMNKPVRILV-----KRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVN 287 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNA---ELPQNSRLHIIEAFNARLFDYLIAT 690 + ++ +K R ++A ++ QN+R I+ F + LI T Sbjct: 288 T---RRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 336
>IF410_TOBAC (P41382) Eukaryotic initiation factor 4A-10 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-10) (eIF-4A-10) Length = 413 Score = 50.1 bits (118), Expect = 7e-06 Identities = 51/232 (21%), Positives = 102/232 (43%), Gaps = 3/232 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQ+ +L + +K+ S ++ + L +++V TP V + + Sbjct: 119 ELAQQIEKVMRALGDYLG--VKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQ 176 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 ++ IK M +LDEAD +LS +D + + +P Q + SAT P+ ++T+ Sbjct: 177 SLRPDHIK----MFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITR 232 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 ++ P + + +DDV + ++QF+++ ++ +IFVN Sbjct: 233 KFMNKPVRILV-----KRDDVTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVN 287 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNA---ELPQNSRLHIIEAFNARLFDYLIAT 690 + ++ +K R ++A ++ QN+R I+ F + LI T Sbjct: 288 T---RRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 336
>FAL1_USTMA (Q4P184) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 397 Score = 50.1 bits (118), Expect = 7e-06 Identities = 40/186 (21%), Positives = 86/186 (46%) Frame = +1 Query: 133 NILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQ 312 +I+ TP V I + ++ +IK M+ILDE+D LL+ +D + + ++P S Q Sbjct: 144 HIVSGTPGRVYDMIRRRHLRTKNIK----MLILDESDELLNMGFKDQIYDVYRYLPPSTQ 199 Query: 313 SILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXX 492 +L+SAT D+ ++T + +P + + +D++ + ++QF+++ ++ Sbjct: 200 VVLLSATLPQDVLEMTSKFMTDPVRILV-----KRDELTLEGIKQFFVAVEKEEWKFDTL 254 Query: 493 XXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLF 672 +IF N+ L +++ + + ++ E+ Q R ++ F Sbjct: 255 CDLYDTLTITQAVIFCNTRRKVDWLSAKMKENNFQVSSMHGEMQQKERDEVMAEFRQGSS 314 Query: 673 DYLIAT 690 LI T Sbjct: 315 RVLITT 320
>PRP28_YEAST (P23394) Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) (Helicase CA8) Length = 588 Score = 50.1 bits (118), Expect = 7e-06 Identities = 47/241 (19%), Positives = 102/241 (42%), Gaps = 12/241 (4%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSK----LKIVQVTASMSDKDIKLALSGPPNILVTTPACVAAC 171 EL QQ+ E + ++ + + K++ + S ++I +LS +ILV TP + Sbjct: 265 ELVQQIQKETQKVTKIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILVATPGRLIDS 324 Query: 172 ISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSC------QSILMSAT 333 + ++ + + + ++LDEAD ++ ED + ++ + + Q+++ +AT Sbjct: 325 LENHLL----VMKQVETLVLDEADKMIDLGFEDQVTNILTKVDINADSAVNRQTLMFTAT 380 Query: 334 SSPDIDKLTKLLLHNPFVLTL-TEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXX 510 +P I+K+ + P T+ E G + + Q + + D Sbjct: 381 MTPVIEKIAAGYMQKPVYATIGVETG-------SEPLIQQVVEYADNDEDKFKKLKPIVA 433 Query: 511 XXXXXVLIFVNSIDNA-FRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIA 687 ++IF+N A + F ++ ++ +L+ Q R H ++ F +IA Sbjct: 434 KYDPPIIIFINYKQTADWLAEKFQKETNMKVTILHGSKSQEQREHSLQLFRTNKVQIMIA 493 Query: 688 T 690 T Sbjct: 494 T 494
>IF413_TOBAC (Q40466) Eukaryotic initiation factor 4A-13 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-13) (eIF-4A-13) (Fragment) Length = 355 Score = 50.1 bits (118), Expect = 7e-06 Identities = 51/232 (21%), Positives = 102/232 (43%), Gaps = 3/232 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQ+ +L + +K+ S ++ + L +++V TP V + + Sbjct: 119 ELAQQIEKVMRALGDYLG--VKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQ 176 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 ++ IK M +LDEAD +LS +D + + +P Q + SAT P+ ++T+ Sbjct: 177 SLRPDHIK----MFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITR 232 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 ++ P + + +DDV + ++QF+++ ++ +IFVN Sbjct: 233 KFMNQPVRILV-----KRDDVTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVN 287 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNA---ELPQNSRLHIIEAFNARLFDYLIAT 690 + ++ +K R ++A ++ QN+R I+ F + LI T Sbjct: 288 T---RRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 336
>DBP4_YEAST (P20448) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-) (DEAD box| protein 4) (Helicase CA4) (Helicase UF1) Length = 770 Score = 50.1 bits (118), Expect = 7e-06 Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 5/162 (3%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALS--GPPNILVTTPACVAACIS 177 EL Q+Y + + + +V + KD+K L NIL+ TP + + Sbjct: 124 ELAMQIYEVLTKIGSHTSFSAGLV-----IGGKDVKFELERISRINILIGTPGRILQHLD 178 Query: 178 KGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKL 357 + + +S +L M++LDEAD L + L A+V + S Q++L SAT S + L Sbjct: 179 QAVGLNTS---NLQMLVLDEADRCLDMGFKKTLDAIVSTLSPSRQTLLFSATQSQSVADL 235 Query: 358 TKLLLHNPFVLTLTEVGHA---KDDVVPKNVQQFWISCSAKD 474 +L L + + +V K+ P+ +QQF+I D Sbjct: 236 ARLSLTDYKTVGTHDVMDGSVNKEASTPETLQQFYIEVPLAD 277
>DED1_KLULA (Q6CLR3) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 627 Score = 49.7 bits (117), Expect = 8e-06 Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 7/236 (2%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q+Y+EA K +V AS+ D IK G N+LV TP + + + Sbjct: 253 ELATQIYDEAKKFTYRSWVKPMVVYGGASI-DNQIKQMRYGC-NLLVATPGRLTDLLERR 310 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALV-----PHIPRSCQSILMSATSSPDI 348 + +++K ++LDEAD +L E ++ +V P + Q+++ SAT +I Sbjct: 311 YISLANVK----YLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNR-QTLMFSATFPSEI 365 Query: 349 DKLTKLLLHNPFVLTLTEVGHAKDDVVPK--NVQQFWISCSAKDXXXXXXXXXXXXXXXX 522 L L + L++ VG +++ K V+ F + + D Sbjct: 366 QHLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLD--------LLAASNEG 417 Query: 523 XVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 LIFV + A L FL ++ ++ + Q R + AF L+AT Sbjct: 418 LTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVAT 473
>IF4A_SCHPO (P47943) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 392 Score = 49.7 bits (117), Expect = 8e-06 Identities = 41/197 (20%), Positives = 86/197 (43%) Frame = +1 Query: 100 KDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLK 279 +D AL +++V TP V I + + +++ M +LDEAD +LS +D + Sbjct: 128 RDDMAALQAGVHVVVGTPGRVHDMIQRRALPTDAVQ----MFVLDEADEMLSRGFKDQIY 183 Query: 280 ALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWIS 459 + +P + Q +L+SAT D+ ++T + +P + + KD++ + ++QF+++ Sbjct: 184 DIFQLLPPTAQVVLLSATMPQDVLEVTTKFMRDPIRILV-----KKDELTLEGIKQFYVA 238 Query: 460 CSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRL 639 ++ +IF N+ L L + + ++ ++ Q R Sbjct: 239 VEKEEWKLDTLCDLYETVTVTQAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRD 298 Query: 640 HIIEAFNARLFDYLIAT 690 ++ F LI T Sbjct: 299 TLMHEFRTGSSRILITT 315
>DBP7_ASHGO (Q754J2) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-)| Length = 710 Score = 49.7 bits (117), Expect = 8e-06 Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 17/161 (10%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q+Y S+L + C + + V K K L N +V TP + + Sbjct: 221 ELAAQIYGVISTLAQCCHYLVPCLLVGGERK-KSEKARLRKGANFIVGTPGRMLDHLQNT 279 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALV-------------PHIPRSCQSILM 324 V + SL +ILDE D L+ E+ LK+++ P +P+ +L Sbjct: 280 KVAREQLPHSLRYLILDEGDKLMELGFEETLKSILEIVHSVACDNTRFPRLPQRIVHVLC 339 Query: 325 SATSSPDIDKLTKLLLHNPFVL----TLTEVGHAKDDVVPK 435 SAT + KL + L +P V+ + T+V D ++ K Sbjct: 340 SATRQGTVSKLGDIALTDPKVIAASDSTTDVSTVPDQLLQK 380
>IF4A_USTMA (Q4P331) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 411 Score = 49.7 bits (117), Expect = 8e-06 Identities = 40/185 (21%), Positives = 81/185 (43%) Frame = +1 Query: 136 ILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQS 315 ++V TP V I++ + +K M LDEAD +LS +D + + +P+ Q Sbjct: 159 VVVGTPGRVYDMINRRAFKTDQLK----MFCLDEADEMLSRGFKDQMYEVFQLLPQDTQC 214 Query: 316 ILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXX 495 +L+SAT ++ ++TK + +P + + +D++ + ++QF+++ +D Sbjct: 215 VLLSATMPQEVLEVTKKFMRDPIRILV-----KRDELTLEGIKQFYVAVEKEDWKLDTLC 269 Query: 496 XXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFD 675 +IF N+ L L + ++ ++ Q R I+ F + Sbjct: 270 DLYETVTITQAVIFCNTRRKVDWLTDKLTSREFTVSAMHGDMEQAQREVIMREFRSGSSR 329 Query: 676 YLIAT 690 LI T Sbjct: 330 VLITT 334
>DBP1_YEAST (P24784) ATP-dependent RNA helicase DBP1 (EC 3.6.1.-) (DEAD box| protein 1) (Helicase CA1) Length = 617 Score = 49.7 bits (117), Expect = 8e-06 Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 8/194 (4%) Frame = +1 Query: 133 NILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSC- 309 ++LV TP + + +G V ++IK ++LDEAD +L E ++ HI C Sbjct: 289 DLLVATPGRLNDLLERGKVSLANIK----YLVLDEADRMLDMGFEPQIR----HIVEECD 340 Query: 310 -------QSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSA 468 Q+++ SAT DI L + L N L++ VG + N+ Q + Sbjct: 341 MPSVENRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSE-----NITQRILYVDD 395 Query: 469 KDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHII 648 D LIFV + A +L FL ++ ++ + Q R + Sbjct: 396 MD-KKSALLDLLSAEHKGLTLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERAL 454 Query: 649 EAFNARLFDYLIAT 690 AF A + D L+AT Sbjct: 455 SAFKANVADILVAT 468
>SPB4_CANGA (Q6FKS8) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)| Length = 617 Score = 49.3 bits (116), Expect = 1e-05 Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 8/143 (5%) Frame = +1 Query: 4 ELCQQVYNEASSLLEL-------CTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACV 162 EL Q+ N SS LE S+L + S+ D D+ L P IL+ TP V Sbjct: 94 ELSMQIQNVVSSFLEHYPEDQYPIRSQLVVGTNEKSVRD-DVNTLLDERPQILIGTPGRV 152 Query: 163 AACISKGIVQGSSIK-ESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSS 339 +Q S+K S M++LDEAD LL D++ ++ +P+ ++ L SAT S Sbjct: 153 L-----DFLQSPSVKTSSCGMVVLDEADRLLDVSFFKDVEKILNVLPKQRRTGLFSATIS 207 Query: 340 PDIDKLTKLLLHNPFVLTLTEVG 408 + K L NP +T+ G Sbjct: 208 SAGTLIFKTGLRNPVKITVNSQG 230
>IF414_TOBAC (Q40467) Eukaryotic initiation factor 4A-14 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-14) (eIF-4A-14) Length = 413 Score = 49.3 bits (116), Expect = 1e-05 Identities = 51/232 (21%), Positives = 101/232 (43%), Gaps = 3/232 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQ+ +L + +K+ S ++ + L +++V TP V + + Sbjct: 119 ELAQQIEKVMRALGDYLG--VKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQ 176 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 ++ IK M +LDEAD +LS +D + + +P Q + SAT P+ ++T+ Sbjct: 177 SLRPDHIK----MFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITR 232 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 + P + + +DDV + ++QF+++ ++ +IFVN Sbjct: 233 KFMSKPVRILV-----KRDDVTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVN 287 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNA---ELPQNSRLHIIEAFNARLFDYLIAT 690 + ++ +K R ++A ++ QN+R I+ F + LI T Sbjct: 288 T---RRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 336
>DDX25_HUMAN (Q9UHL0) ATP-dependent RNA helicase DDX25 (EC 3.6.1.-) (DEAD box| protein 25) (Gonadotropin-regulated testicular RNA helicase) Length = 483 Score = 49.3 bits (116), Expect = 1e-05 Identities = 45/208 (21%), Positives = 87/208 (41%), Gaps = 2/208 (0%) Frame = +1 Query: 73 VQVTASMSDKDIKLALSGPPNILVTTPACVAA-CISKGIVQGSSIKESLSMMILDEADLL 249 VQV ++ I I++ TP V C ++ + I+ + +LDEAD++ Sbjct: 197 VQVMYAIRGNRIPRGTDITKQIIIGTPGTVLDWCFKLKLIDLTKIR----VFVLDEADVM 252 Query: 250 LSYRCEDDLKALVPH-IPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDV 426 + + D + +P CQ +L SAT + + ++ +P V+ L K+++ Sbjct: 253 IDTQGFSDHSIRIQRALPSECQMLLFSATFEDSVWHFAERIIPDPNVIKL-----RKEEL 307 Query: 427 VPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAV 606 N++Q+++ C + +IF + NA L + + + + ++ Sbjct: 308 TLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSL 367 Query: 607 LNAELPQNSRLHIIEAFNARLFDYLIAT 690 L+ EL R II+ F LI T Sbjct: 368 LSGELTVEQRASIIQRFRDGKEKVLITT 395
>HAS1_YARLI (Q6C7D2) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 605 Score = 49.3 bits (116), Expect = 1e-05 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 1/134 (0%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q+Y A L+ + L IV + ++ KL + N+LV TP + + Sbjct: 214 ELALQIYGVARDLMANHSQTLGIVIGGNNRRQEEEKL--NKGVNLLVCTPGRLLDHLQNS 271 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 QG K +L +I+DEAD +L E ++K ++ +P+ QS+L SAT + ++ L + Sbjct: 272 --QGFVFK-NLKALIIDEADRILEIGFEQEMKEIIKILPKERQSMLFSATQTTKVEDLAR 328 Query: 364 L-LLHNPFVLTLTE 402 + L P L + E Sbjct: 329 ISLKKGPLYLNVDE 342
>SRMB_HAEIN (P44701) ATP-dependent RNA helicase srmB homolog (EC 3.6.1.-)| Length = 439 Score = 48.9 bits (115), Expect = 1e-05 Identities = 52/235 (22%), Positives = 95/235 (40%), Gaps = 6/235 (2%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QV +A L + + L I +T ++ ++ + +++V TP + I + Sbjct: 87 ELAMQVAEQAEELAQF--THLNIATITGGVAYQNHGDVFNTNQDLVVATPGRLLQYIKEE 144 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDI-DKLT 360 S++ M+I DEAD +L D + + Q++L SAT ++ Sbjct: 145 NFDCRSVE----MLIFDEADRMLQMGFGQDAEKIAAETRWRKQTLLFSATLEGELLVDFA 200 Query: 361 KLLLHNPFVLTLTEVGHAKDDVVP-----KNVQQFWISCSAKDXXXXXXXXXXXXXXXXX 525 + LL++P K D P K + Q++ + + Sbjct: 201 ERLLNDP----------VKVDAEPSRRERKKINQWYYHADSNEHKIKLLARFIETEEVTR 250 Query: 526 VLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 ++F+ ++A L L K IRSA L E+ Q R + I+ + + L+AT Sbjct: 251 GIVFIRRREDARELSETLRKRGIRSAYLEGEMAQTQRNNAIDKLKSGIVTVLVAT 305
>DBP4_CANGA (Q6FPT7) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 765 Score = 48.9 bits (115), Expect = 1e-05 Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 1/127 (0%) Frame = +1 Query: 97 DKDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDL 276 D + +L NIL+ TP + + + + +S +L M++LDEAD L + L Sbjct: 152 DVNFELERIAKINILIGTPGRILQHMDQAVGLNTS---NLQMLVLDEADRCLDMGFQKTL 208 Query: 277 KALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKD-DVVPKNVQQFW 453 A+V ++P Q++L SAT S I L +L L + + + ++D PK +QQ + Sbjct: 209 DAIVGNLPPDRQTLLFSATQSQSISDLARLSLTD--YKKIGTIDSSEDGPATPKTLQQSY 266 Query: 454 ISCSAKD 474 I D Sbjct: 267 IIADLAD 273
>DDX48_MOUSE (Q91VC3) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) Length = 411 Score = 48.9 bits (115), Expect = 1e-05 Identities = 37/186 (19%), Positives = 88/186 (47%) Frame = +1 Query: 133 NILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQ 312 +++ TP V I + ++ +IK M++LDEAD +L+ ++ + + ++P + Q Sbjct: 158 HVVAGTPGRVFDMIRRRSLRTRAIK----MLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 213 Query: 313 SILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXX 492 +L+SAT +I ++T + +P + + +D++ + ++QF+++ ++ Sbjct: 214 VVLISATLPHEILEMTNKFMTDPIRILV-----KRDELTLEGIKQFFVAVEREEWKFDTL 268 Query: 493 XXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLF 672 +IF N+ L + + + ++ ++PQ R I++ F + Sbjct: 269 CDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGAS 328 Query: 673 DYLIAT 690 LI+T Sbjct: 329 RVLIST 334
>DDX48_MACFA (Q4R3Q1) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) Length = 411 Score = 48.9 bits (115), Expect = 1e-05 Identities = 37/186 (19%), Positives = 88/186 (47%) Frame = +1 Query: 133 NILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQ 312 +++ TP V I + ++ +IK M++LDEAD +L+ ++ + + ++P + Q Sbjct: 158 HVVAGTPGRVFDMIRRRSLRTRAIK----MLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 213 Query: 313 SILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXX 492 +L+SAT +I ++T + +P + + +D++ + ++QF+++ ++ Sbjct: 214 VVLISATLPHEILEMTNKFMTDPIRILV-----KRDELTLEGIKQFFVAVEREEWKFDTL 268 Query: 493 XXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLF 672 +IF N+ L + + + ++ ++PQ R I++ F + Sbjct: 269 CDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGAS 328 Query: 673 DYLIAT 690 LI+T Sbjct: 329 RVLIST 334
>DDX48_HUMAN (P38919) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) (Eukaryotic initiation factor 4A-like NUK-34) (Nuclear matrix protein 265) (hNMP 265) (Eukaryotic translation initiation factor 4A isoform 3) Length = 411 Score = 48.9 bits (115), Expect = 1e-05 Identities = 37/186 (19%), Positives = 88/186 (47%) Frame = +1 Query: 133 NILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQ 312 +++ TP V I + ++ +IK M++LDEAD +L+ ++ + + ++P + Q Sbjct: 158 HVVAGTPGRVFDMIRRRSLRTRAIK----MLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 213 Query: 313 SILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXX 492 +L+SAT +I ++T + +P + + +D++ + ++QF+++ ++ Sbjct: 214 VVLISATLPHEILEMTNKFMTDPIRILV-----KRDELTLEGIKQFFVAVEREEWKFDTL 268 Query: 493 XXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLF 672 +IF N+ L + + + ++ ++PQ R I++ F + Sbjct: 269 CDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGAS 328 Query: 673 DYLIAT 690 LI+T Sbjct: 329 RVLIST 334
>IF4A9_TOBAC (Q40471) Eukaryotic initiation factor 4A-9 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) Length = 413 Score = 48.9 bits (115), Expect = 1e-05 Identities = 50/232 (21%), Positives = 103/232 (44%), Gaps = 3/232 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQ+ +L + +K+ S ++ + LS +++V TP V + + Sbjct: 119 ELAQQIEKVMRALGDYLG--VKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQ 176 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 ++ IK M +LDEAD +LS +D + + +P Q + SAT P+ ++T+ Sbjct: 177 SLRPDHIK----MFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITR 232 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 ++ P + + +D++ + ++QF+++ ++ +IFVN Sbjct: 233 KFMNKPVRILV-----KRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVN 287 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNA---ELPQNSRLHIIEAFNARLFDYLIAT 690 + ++ +K R ++A ++ QN+R I+ F + LI T Sbjct: 288 T---RRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 336
>DRS1_YEAST (P32892) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-) (Deficiency| of ribosomal subunits protein 1) Length = 752 Score = 48.9 bits (115), Expect = 1e-05 Identities = 44/191 (23%), Positives = 77/191 (40%) Frame = +1 Query: 118 LSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHI 297 L P+I++ TP I S +S+ ++++DEAD +L +D+L ++ + Sbjct: 350 LKSRPDIVIATPGRFIDHIRNS---ASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLL 406 Query: 298 PRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDX 477 P + Q++L SAT + I L L L P + + A + + V + K Sbjct: 407 PSNRQNLLFSATMNSKIKSLVSLSLKKPVRIMIDPPKKAATKLTQEFV-RIRKRDHLKPA 465 Query: 478 XXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAF 657 +++FV + A RLR+ + + L+ L Q RL + F Sbjct: 466 LLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIMGLLGMSVGELHGSLTQEQRLDSVNKF 525 Query: 658 NARLFDYLIAT 690 LI T Sbjct: 526 KNLEVPVLICT 536
>SPB4_YARLI (Q6C193) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)| Length = 626 Score = 48.5 bits (114), Expect = 2e-05 Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 1/114 (0%) Frame = +1 Query: 94 SDKDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKES-LSMMILDEADLLLSYRCED 270 S D+K L P I+V TP + +++ IK S ++LDEAD LL Sbjct: 145 SHMDLKNFLRDKPQIIVATPGRLLE-----LLRAPQIKTSAFDSLVLDEADRLLDLGFGR 199 Query: 271 DLKALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVP 432 D+ +++ +P+ ++ L SAT + I L K+ L NP V + +VG K+ P Sbjct: 200 DITSIINILPKQRRTGLFSATITDAIQNLVKIGLRNP-VKIVVKVGGKKEQKTP 252
>SPB4_USTMA (Q4P9E5) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)| Length = 767 Score = 48.5 bits (114), Expect = 2e-05 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 7/121 (5%) Frame = +1 Query: 133 NILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQ 312 +ILV TP + +SK V+ K SL +++LDEAD LL ++L+ ++ +P+ + Sbjct: 210 DILVGTPGRLEELLSKKGVK----KSSLEVLVLDEADRLLDLGFTENLRRILSLLPKQRR 265 Query: 313 SILMSATSSPDIDKLTKLLLHNPF-VLTLTEVGHAKDDVV------PKNVQQFWISCSAK 471 + L SAT + + +L ++ L NP V+ E H + P +Q + C A+ Sbjct: 266 TGLFSATMTDALSELVRIGLRNPVRVVVKVEAKHKTSSSIDDSRRTPATLQNLYQLCRAQ 325 Query: 472 D 474 + Sbjct: 326 N 326
>HAS1_ASHGO (Q74Z73) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 504 Score = 48.5 bits (114), Expect = 2e-05 Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 4/159 (2%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACI--S 177 EL Q++ A L+E + IV A+ + KLA N+L+ TP + + + Sbjct: 122 ELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKLAKG--VNLLIATPGRLLDHLQNT 179 Query: 178 KGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP-RSCQSILMSATSSPDIDK 354 KG V ++L +++DEAD +L ED++K ++ +P QS+L SAT + ++ Sbjct: 180 KGFVF-----KNLKALVIDEADRILEIGFEDEMKQIIKILPNEDRQSMLFSATQTTKVED 234 Query: 355 LTKLLLH-NPFVLTLTEVGHAKDDVVPKNVQQFWISCSA 468 L ++ L P + V K+ ++Q ++ C + Sbjct: 235 LARISLRPGPLFI---NVDSEKETSTADGLEQGYVVCDS 270
>IF4A2_ARATH (P41377) Eukaryotic initiation factor 4A-2 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF-4A-2) Length = 412 Score = 48.5 bits (114), Expect = 2e-05 Identities = 50/232 (21%), Positives = 101/232 (43%), Gaps = 3/232 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQ+ +L + +K+ S ++ + L +++V TP V + + Sbjct: 118 ELAQQIEKVMRALGDY--QGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQ 175 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 ++ IK M +LDEAD +LS +D + + +P Q + SAT P+ ++T+ Sbjct: 176 SLRPDCIK----MFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITR 231 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 + P + + +D++ + ++QF+++ +D +IFVN Sbjct: 232 KFMSKPVRILV-----KRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVN 286 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNA---ELPQNSRLHIIEAFNARLFDYLIAT 690 + ++ +K R ++A ++ QN+R I+ F + LI T Sbjct: 287 T---RRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 335
>IF4A1_ARATH (P41376) Eukaryotic initiation factor 4A-1 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF-4A-1) Length = 412 Score = 48.5 bits (114), Expect = 2e-05 Identities = 49/232 (21%), Positives = 102/232 (43%), Gaps = 3/232 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQ+ +L + +K+ S ++ + L +++V TP V + + Sbjct: 118 ELAQQIEKVMRALGDYLG--VKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQ 175 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 ++ +IK M +LDEAD +LS +D + + +P Q + SAT P+ ++T+ Sbjct: 176 SLRADNIK----MFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITR 231 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 + P + + +D++ + ++QF+++ ++ +IFVN Sbjct: 232 KFMSKPVRILV-----KRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVN 286 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNA---ELPQNSRLHIIEAFNARLFDYLIAT 690 + ++ +K R ++A ++ QN+R I+ F + LI T Sbjct: 287 T---RRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 335
>SUB2_DEBHA (Q6BME5) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 435 Score = 48.1 bits (113), Expect = 2e-05 Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 1/177 (0%) Frame = +1 Query: 130 PNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLL-SYRCEDDLKALVPHIPRS 306 P+I+V TP + A +++ ++ ++IK ++DE D +L + D++ + + P Sbjct: 174 PHIVVATPGRLHALVTEKSIRLNNIKS----FVIDECDKVLEAVDMRRDVQDIFRNTPHQ 229 Query: 307 CQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXX 486 Q ++ SAT S +I + K + NP + + + + + +QQ++I K+ Sbjct: 230 KQVMMFSATLSQEIRPVCKKFMQNPLEIYVDD----EAKLTLHGLQQYYIKLDEKEKNRK 285 Query: 487 XXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAF 657 V+IFV S A L L S +++ LPQ R+ ++F Sbjct: 286 LSDLLDSLEFNQ-VIIFVRSTQRANELNKLLCSSNFPSIAVHSGLPQEERIERYKSF 341
>FAL1_SCHPO (Q10055) ATP-dependent RNA helicase tif412 (EC 3.6.1.-)| Length = 394 Score = 48.1 bits (113), Expect = 2e-05 Identities = 40/186 (21%), Positives = 83/186 (44%) Frame = +1 Query: 133 NILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQ 312 +++ TP V I + ++ ++K M+ILDEAD LL+ ++ + + ++P Q Sbjct: 141 HVVSGTPGRVTDMIRRRNLRTRNVK----MLILDEADELLNQGFKEQIYDIYRYLPPGTQ 196 Query: 313 SILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXX 492 +++SAT D+ ++T NP + + +D++ + ++Q++I+ ++ Sbjct: 197 VVVVSATLPQDVLEMTNKFTTNPVRILV-----KRDELTLEGLKQYFIAVEKEEWKFDTL 251 Query: 493 XXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLF 672 +IF NS L + + ++ E+PQ R I++ F Sbjct: 252 CDLYDTLTITQAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNS 311 Query: 673 DYLIAT 690 LI T Sbjct: 312 RVLICT 317
>IF4A_WHEAT (P41378) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 414 Score = 48.1 bits (113), Expect = 2e-05 Identities = 49/232 (21%), Positives = 104/232 (44%), Gaps = 3/232 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQ+ +L + +K+ S ++ + L+ +++V TP V + + Sbjct: 120 ELAQQIEKVMRALGDYLG--VKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDIVRRQ 177 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 ++ +IK M +LDEAD +LS +D + + +P Q + SAT P+ ++T+ Sbjct: 178 SLRPDNIK----MFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITR 233 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 ++ P + + +D++ + ++QF+++ ++ +IFVN Sbjct: 234 KFMNKPVRILV-----KRDELTLEGIKQFYVNVEKEEWKLDTLCDLYETLAITQSVIFVN 288 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNA---ELPQNSRLHIIEAFNARLFDYLIAT 690 + ++ +K R ++A ++ QN+R I+ F + LI T Sbjct: 289 T---RRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 337
>DED1_CANGA (Q8TFK8) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 617 Score = 48.1 bits (113), Expect = 2e-05 Identities = 56/237 (23%), Positives = 97/237 (40%), Gaps = 8/237 (3%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q+++EA K +V A + ++ + ++LV TP + + +G Sbjct: 239 ELATQIFDEAKKFCYRSWVKPCVVYGGAPIGNQ--MREMDHGCDLLVATPGRLNDLLERG 296 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSC--------QSILMSATSS 339 V S++K ++LDEAD +L E ++ HI C Q+++ SAT Sbjct: 297 KVSLSNVK----YLVLDEADRMLDMGFEPQIR----HIVEDCDMPPTGERQTLMFSATFP 348 Query: 340 PDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXX 519 DI L + LH+ L++ VG + N+ Q + +D Sbjct: 349 HDIQHLARDFLHDYIFLSVGRVGSTSE-----NITQRILYVENRD-KNSALLDLLAASND 402 Query: 520 XXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 LIFV + A +L FL + ++ + Q R + AF + + L+AT Sbjct: 403 NLTLIFVETKRMADQLTDFLIMQNFSATAIHGDRSQAERERALAAFRSGRANILVAT 459
>YQFR_BACSU (P54475) Probable ATP-dependent RNA helicase yqfR (EC 3.6.1.-)| Length = 438 Score = 47.8 bits (112), Expect = 3e-05 Identities = 53/235 (22%), Positives = 95/235 (40%), Gaps = 6/235 (2%) Frame = +1 Query: 4 ELCQQVYNEASSLLE-----LCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAA 168 EL Q+Y EA + + SK I S +K+ P+++V TP +A Sbjct: 83 ELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSIDKLKIQ----PHLVVGTPGRIAD 138 Query: 169 CISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDI 348 I + Q S+ ++ S++I DEADL+L D+ + +P Q ++ SAT + Sbjct: 139 LIKE---QALSVHKAESLVI-DEADLMLDMGFLADVDYIGSRMPEDLQMLVFSATIPEKL 194 Query: 349 DKLTKLLLHNPFVLTLTEVGHAK-DDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXX 525 K + NP + H + V ++ I +D Sbjct: 195 KPFLKKYMENP------KYAHVEPKQVTAAKIEHILIPSKHRDKDKLLFDIMSHLNPYLG 248 Query: 526 VLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 + +F N+ + A + +L ++ +L+ L R +++ N F Y+IAT Sbjct: 249 I-VFANTKNTADHIAQYLTGKGMKIGLLHGGLTPRERKKVMKQINDLEFTYIIAT 302
>DRS1_DEBHA (Q6BTL5) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 771 Score = 47.8 bits (112), Expect = 3e-05 Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 1/188 (0%) Frame = +1 Query: 130 PNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPR-S 306 P+I++ TP + I S +SL ++++DEAD +L + +L ++ IPR Sbjct: 381 PDIVIATPGRLIDHIRNS---PSFSIDSLEVLVIDEADRMLDEGFQAELTEILSLIPRHK 437 Query: 307 CQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXX 486 Q++L SAT + I L +L L P + + A +V + V + K Sbjct: 438 RQTLLYSATMNTKIQDLIQLSLQKPVRVMIDPPKSAAIKLVQEFV-RIRKRDHLKPALLF 496 Query: 487 XXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNAR 666 +++FV ++A +LR+ L +R + L+ L Q RL + F Sbjct: 497 QLIKSVDPSQQNRIVVFVARKESAHKLRIILGLLGMRVSELHGSLTQEQRLASVNDFKNL 556 Query: 667 LFDYLIAT 690 LI T Sbjct: 557 TVPVLICT 564
>HAS1_KLULA (Q6CXB7) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 497 Score = 47.8 bits (112), Expect = 3e-05 Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 4/159 (2%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACI--S 177 EL Q++ A L+E + IV A+ + KL NIL+ TP + + + Sbjct: 117 ELALQIFGVARELMEFHSQTFGIVIGGANRRQEADKLMKG--VNILIATPGRLLDHLQNT 174 Query: 178 KGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP-RSCQSILMSATSSPDIDK 354 KG I ++L +++DEAD +L ED+++ ++ +P QS+L SAT + ++ Sbjct: 175 KGF-----IFKNLKALVIDEADRILEIGFEDEMRQIIKILPNEDRQSMLFSATQTTKVED 229 Query: 355 LTKLLLH-NPFVLTLTEVGHAKDDVVPKNVQQFWISCSA 468 L ++ L P + V KD ++Q ++ C + Sbjct: 230 LARISLRPGPLFI---NVDSEKDTSTADGLEQGYVVCES 265
>RRP3_KLULA (Q6CT85) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 487 Score = 47.4 bits (111), Expect = 4e-05 Identities = 55/236 (23%), Positives = 95/236 (40%), Gaps = 7/236 (2%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQ+ SL L ++ + MS D L P+I++ TP + + Sbjct: 146 ELAQQIKETFDSLGSLMG--VRSTCIVGGMSMMDQARDLMRKPHIIIATPGRLMDHLEN- 202 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSI-LMSATSSPDIDKLT 360 +G ++++ L +++DEAD LL L ++ IP ++ L SAT + IDKL Sbjct: 203 -TKGFNLRK-LKYLVMDEADRLLDMEFGPVLDRILNIIPTQGRTTYLFSATMTSKIDKLQ 260 Query: 361 KLLLHNPFVLTLTEVGHAKDD------VVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXX 522 + L NP ++ D VVP ++ ++ + Sbjct: 261 RASLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKNTFLIYLLNE------------FIGK 308 Query: 523 XVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 ++F + NA R+ + L+ +L QN R ++ F A L+AT Sbjct: 309 STIVFTRTKANAERISNLCNLLEFSATALHGDLNQNQRTGALDLFKAGKRSILVAT 364
>IF4A2_NICPL (P41379) Eukaryotic initiation factor 4A-2 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF-4A-2) Length = 413 Score = 47.4 bits (111), Expect = 4e-05 Identities = 49/232 (21%), Positives = 102/232 (43%), Gaps = 3/232 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQ+ +L + +K+ S ++ + L +++V TP V + + Sbjct: 119 ELAQQIEKVMRALGDYLG--VKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQ 176 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 ++ IK M +LDEAD +LS +D + + +P Q + SAT P+ ++T+ Sbjct: 177 SLRPDHIK----MFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITR 232 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 ++ P + + +D++ + ++QF+++ ++ +IFVN Sbjct: 233 KFMNKPVRILV-----KRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVN 287 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNA---ELPQNSRLHIIEAFNARLFDYLIAT 690 + ++ +K R ++A ++ QN+R I+ F + LI T Sbjct: 288 T---RRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 336
>IF411_TOBAC (Q40465) Eukaryotic initiation factor 4A-11 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-11) (eIF-4A-11) Length = 413 Score = 47.4 bits (111), Expect = 4e-05 Identities = 49/232 (21%), Positives = 103/232 (44%), Gaps = 3/232 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQ+ +L + +K+ S ++ + L +++V TP V + + Sbjct: 119 ELAQQIEKVMRALGDYLG--VKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQ 176 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 ++ +IK M +LDEAD +LS +D + + +P Q + SAT P+ ++T+ Sbjct: 177 SLRPDNIK----MFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITR 232 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 ++ P + + +D++ + ++QF+++ ++ +IFVN Sbjct: 233 KFMNKPVRILV-----KRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVN 287 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNA---ELPQNSRLHIIEAFNARLFDYLIAT 690 + ++ +K R ++A ++ QN+R I+ F + LI T Sbjct: 288 T---RRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 336
>DBP8_ASHGO (Q756G5) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 435 Score = 47.4 bits (111), Expect = 4e-05 Identities = 55/237 (23%), Positives = 99/237 (41%), Gaps = 8/237 (3%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDI---KLALSGPPNILVTTPACVAACI 174 EL Q+ + ++L + ++ +V + +DI L L P+ ++ TP +A I Sbjct: 85 ELAMQIAEQFTALGSVMNIRVALV-----VGGEDIVSQALELQRKPHFIIATPGRLAHHI 139 Query: 175 SKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP--RSCQSILMSATSSPDI 348 + + ++LDEAD+LL+ D L V +P Q++L +AT + + Sbjct: 140 MHSGEDTIGGLKRVRYLVLDEADILLTDTFSDALATCVQILPPKEKRQNLLFTATMTDQV 199 Query: 349 DKLTKL--LLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAK-DXXXXXXXXXXXXXXX 519 L P + + V + D VP ++Q ++ Sbjct: 200 LALKDAPPTSGKPPLFSF-HVENLDDLAVPASLQTTYLLVPEHVKEAYLYQVLSSEEYKS 258 Query: 520 XXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 ++FVN +A LR L + IR L++++PQ R + ++ F A LIAT Sbjct: 259 KSAIVFVNRTISAEILRRMLMQLEIRVTSLHSQMPQRERTNSLQRFRANAARVLIAT 315
>SPB4_DEBHA (Q6BSM3) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)| Length = 614 Score = 47.4 bits (111), Expect = 4e-05 Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 5/131 (3%) Frame = +1 Query: 4 ELCQQVYNEASSLLEL-----CTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAA 168 EL +Q+ +LE T K +++ + S +DI L+ +IL+ TP + Sbjct: 104 ELAKQIQTVFDKVLEYIPEDKATIKTQLLVGSLSSVREDIDYFLTNKTHILIATPGRLLD 163 Query: 169 CISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDI 348 +S V+ +S++ + +LDEAD LL E D+ ++ +P+ ++ L SAT S Sbjct: 164 FLSSNYVKTNSVE----IAVLDEADKLLDISFERDVIKILKQLPKQRRTGLFSATISSAG 219 Query: 349 DKLTKLLLHNP 381 D + + + NP Sbjct: 220 DTIFRTGMANP 230
>DBP3_YARLI (Q6C9P3) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 532 Score = 47.4 bits (111), Expect = 4e-05 Identities = 54/234 (23%), Positives = 94/234 (40%), Gaps = 5/234 (2%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQ--VTASMSDKDIKLALSGPPNILVTTPACVAACIS 177 EL Q+Y+ L ++ V V D+K A + ++ TP + I Sbjct: 205 ELAMQIYDNIKELCDVVGLHAVCVYGGVPKEQQRSDLKRA-----SFVIATPGRLCDLID 259 Query: 178 KGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHI-PRSCQSILMSATSSPDIDK 354 +G S + S ++LDEAD +L E+D+K ++ P Q+++ SAT P++ K Sbjct: 260 EGSCDLSKV----SYLVLDEADRMLEKGFEEDIKKIIGSTRPTGRQTVMFSATWPPEVRK 315 Query: 355 LTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQF--WISCSAKDXXXXXXXXXXXXXXXXXV 528 L + + P T +G + K + Q + AK+ + Sbjct: 316 LAEGFMKTP---TKVMIGERDELAANKRITQSVEVLDPRAKE-GRLLDLLRQYANDDFKI 371 Query: 529 LIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 LIF A R+ L + A ++ +L Q R ++ F + L+AT Sbjct: 372 LIFALYKKEATRVENTLTRRGYGVAAIHGDLSQQQRTKALDEFKKGEKNILLAT 425
>DBP3_CRYNE (Q5KHB7) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 605 Score = 47.0 bits (110), Expect = 6e-05 Identities = 43/196 (21%), Positives = 81/196 (41%), Gaps = 11/196 (5%) Frame = +1 Query: 136 ILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP---RS 306 ++V TP G + SS+ S ++LDEAD +L E+D++ ++ H P Sbjct: 308 VVVGTPGRTLDLADSGELDLSSV----SYLVLDEADRMLDAGFENDIRRIIAHTPGHKEG 363 Query: 307 CQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQ--------QFWISC 462 Q+++ SAT + +L L+NP +T+ + + + + V+ F ++ Sbjct: 364 RQTVMFSATWPESVRRLASTFLNNPLRITVGSDELSANKRIEQIVEVLDNPRDKDFRLTH 423 Query: 463 SAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLH 642 K +L+F A RL + + L+ ++ Q +R Sbjct: 424 HLK---AHLKVHPNSKTSPTRILVFALYKKEAQRLEYTIRRAGYAVGALHGDMTQEARFK 480 Query: 643 IIEAFNARLFDYLIAT 690 +EAF + L+AT Sbjct: 481 ALEAFKTGQQNVLVAT 496
>DED1_YEAST (P06634) ATP-dependent RNA helicase DED1 (EC 3.6.1.-) (DEAD box| protein 1) Length = 604 Score = 47.0 bits (110), Expect = 6e-05 Identities = 51/237 (21%), Positives = 96/237 (40%), Gaps = 8/237 (3%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q+++EA K +V + + ++ ++ ++LV TP + + +G Sbjct: 236 ELATQIFDEAKKFTYRSWVKACVVYGGSPIGNQLREIERGC--DLLVATPGRLNDLLERG 293 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSC--------QSILMSATSS 339 + +++K ++LDEAD +L E ++ HI C Q+++ SAT Sbjct: 294 KISLANVK----YLVLDEADRMLDMGFEPQIR----HIVEDCDMTPVGERQTLMFSATFP 345 Query: 340 PDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXX 519 DI L + L + L++ VG +++ K + Sbjct: 346 ADIQHLARDFLSDYIFLSVGRVGSTSENITQK------VLYVENQDKKSALLDLLSASTD 399 Query: 520 XXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 LIFV + A +L FL R+ ++ + Q+ R + AF + L+AT Sbjct: 400 GLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAATLLVAT 456
>DBP4_YARLI (Q6CGD1) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 740 Score = 47.0 bits (110), Expect = 6e-05 Identities = 42/191 (21%), Positives = 83/191 (43%), Gaps = 5/191 (2%) Frame = +1 Query: 133 NILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQ 312 NIL+ TP + + + G + ++ M++LDEAD +L + + A++ ++P Q Sbjct: 162 NILICTPGRLLQHMDQ--TSGFDLS-NVKMLVLDEADRILDMGFKKTMDAILENLPVDRQ 218 Query: 313 SILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXX 492 ++L SAT + + L +L L +P ++ PKN++Q ++ +D Sbjct: 219 TLLFSATQTKSVSDLARLSLADPKYIS---ANPDTTSSTPKNLEQNYVCVELQDKLDTLW 275 Query: 493 XXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKF-----AIRSAVLNAELPQNSRLHIIEAF 657 ++ F +S ++R E F I L+ + Q +R+ ++ F Sbjct: 276 GFLRTHTKFKIIVFFSSS----KQVRYVYETFRTLQPGIPLLHLHGKQKQGARMDVVSKF 331 Query: 658 NARLFDYLIAT 690 + L AT Sbjct: 332 SKASSSCLFAT 342
>IF4A_ORYSA (P35683) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 414 Score = 47.0 bits (110), Expect = 6e-05 Identities = 49/232 (21%), Positives = 103/232 (44%), Gaps = 3/232 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQ+ +L + +K+ S ++ + L+ +++V TP V + + Sbjct: 120 ELAQQIEKVMRALGDYLG--VKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQ 177 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 ++ IK M +LDEAD +LS +D + + +P Q + SAT P+ ++T+ Sbjct: 178 SLRPDYIK----MFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITR 233 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 ++ P + + +D++ + ++QF+++ ++ +IFVN Sbjct: 234 KFMNKPVRILV-----KRDELTLEGIKQFYVNVEKEEWKLDTLCDLYETLAITQSVIFVN 288 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNA---ELPQNSRLHIIEAFNARLFDYLIAT 690 + ++ +K R ++A ++ QN+R I+ F + LI T Sbjct: 289 T---RRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 337
>HAS1_CANAL (Q5AK59) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 565 Score = 47.0 bits (110), Expect = 6e-05 Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 1/156 (0%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q++ A L++ + IV A + KLA N+LV TP + + Sbjct: 191 ELALQIFGVARELMQFHSQTCGIVIGGADRRQEATKLAKG--VNLLVATPGRLLDHLKNT 248 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP-RSCQSILMSATSSPDIDKLT 360 S++K +++DEAD +L ED++K ++ +P + QS+L SAT + ++ L Sbjct: 249 QFVFSNLKA----LVIDEADRILEIGFEDEMKQIIKVLPNENRQSMLFSATQTTKVEDLA 304 Query: 361 KLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSA 468 ++ L P L + V KD ++Q ++ C + Sbjct: 305 RISL-RPGPLYINVVPE-KDVSTADGLEQGYVVCDS 338
>FAL1_ASHGO (Q755W0) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 398 Score = 47.0 bits (110), Expect = 6e-05 Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 4/190 (2%) Frame = +1 Query: 133 NILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRC--EDDLKALVPHIPRS 306 +++ TP V I + I+ +K M++LDEAD LLS + L + +P S Sbjct: 143 HVMSGTPGRVLDMIKRRIINTRHVK----MLVLDEADELLSETLGFKQQLYDIFTKLPSS 198 Query: 307 CQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXX 486 Q +++SAT S + ++TK + +P + + +D+V + ++Q+ I+ ++ Sbjct: 199 VQVVVVSATMSKVVLEVTKKFMSDPVKILV-----KRDEVSLEGIKQYHINVDKEEWKFD 253 Query: 487 XXXXXXXXXXXXXVLIFVNSIDNAFRL--RLFLEKFAIRSAVLNAELPQNSRLHIIEAFN 660 +IF N+ L +L FA+ S ++ ++ Q+ R ++ F Sbjct: 254 TLCDLYDSLTITQCVIFCNTKKKVDWLSHKLIQNNFAVAS--IHGDMKQDDRDKVMSDFR 311 Query: 661 ARLFDYLIAT 690 + LI+T Sbjct: 312 SGSSRVLIST 321
>IF4A8_TOBAC (P41381) Eukaryotic initiation factor 4A-8 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-8) (eIF-4A-8) Length = 413 Score = 47.0 bits (110), Expect = 6e-05 Identities = 48/232 (20%), Positives = 102/232 (43%), Gaps = 3/232 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQ+ +L + +K+ S ++ + L+ +++V TP V + + Sbjct: 119 ELAQQIEKVMRALGDYLG--VKVHACVGGTSVREDQRILAAGVHVIVGTPGRVFDMLRRQ 176 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 ++ + L M +LDEAD +LS +D + + +P Q + SAT P+ +T+ Sbjct: 177 SLR----PDYLRMFVLDEADEMLSRGFKDQIYDIFQMLPTKVQVGVFSATMPPEALDITR 232 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVN 543 ++ P + + +D++ + ++QF+++ ++ +IFVN Sbjct: 233 KFMNKPVRILV-----KRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVN 287 Query: 544 SIDNAFRLRLFLEKFAIRSAVLNA---ELPQNSRLHIIEAFNARLFDYLIAT 690 + ++ +K R ++A ++ QN+R I+ F + LI T Sbjct: 288 T---RRKVDWLTDKMRTRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 336
>HAS1_ASPFU (Q4WQM4) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 622 Score = 46.6 bits (109), Expect = 7e-05 Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 2/157 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q++ A L + + IV A+ + KL N+L+ TP + + Sbjct: 223 ELALQIFGVARELCQYHSQTYGIVIGGANRRAEAEKLMKG--VNLLIATPGRLLDHLQN- 279 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP-RSCQSILMSATSSPDIDKLT 360 QG K +L +++DEAD +L ED+++ +V +P Q++L SAT + ++ L Sbjct: 280 -TQGFVFK-NLKTLVIDEADRILEVGFEDEMRQIVKILPSEERQTMLFSATQTTKVEDLA 337 Query: 361 KLLLH-NPFVLTLTEVGHAKDDVVPKNVQQFWISCSA 468 ++ L P + V H K+ + ++Q ++ C A Sbjct: 338 RISLRPGPLYI---NVDHRKEHSTVEGLEQGYVICEA 371
>IF4A3_NICPL (P41380) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) Length = 391 Score = 46.6 bits (109), Expect = 7e-05 Identities = 38/181 (20%), Positives = 80/181 (44%) Frame = +1 Query: 148 TPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMS 327 TP V I + ++ IK ++ILDE+D +LS +D + + ++P Q +L+S Sbjct: 143 TPGRVCDMIKRRTLRTRGIK----LLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLIS 198 Query: 328 ATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXX 507 AT +I ++T + +P + + +D++ + ++QF+++ ++ Sbjct: 199 ATLPNEILEITSKFMTDPVRILV-----KRDELTLEGIKQFFVAVEKEEWKFDTLCDLYD 253 Query: 508 XXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIA 687 +IF N+ L + + + ++ ++PQ R I+ F LI Sbjct: 254 TLTITQAVIFCNTKRKVDWLTSKMRENNFTVSSMHGDMPQKERDAIMAEFRGGTTRVLIT 313 Query: 688 T 690 T Sbjct: 314 T 314
>MAK5_DEBHA (Q6BV58) ATP-dependent RNA helicase MAK5 (EC 3.6.1.-)| Length = 790 Score = 46.2 bits (108), Expect = 9e-05 Identities = 61/258 (23%), Positives = 103/258 (39%), Gaps = 40/258 (15%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCT-SKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISK 180 EL QV + + + + S+ IV +T +S + + LS P I+V TP + K Sbjct: 288 ELAHQVVDHLNRIAKFTPLSQHGIVSITGGLSIQKQERLLSHGPGIVVATPGRFLELLQK 347 Query: 181 --GIVQGSSIKESLSMMILDEADLLLSYRCEDD----LKALVPHIPRS-------CQSIL 321 +VQ S + +++LDEAD LL D+ L+ H PR Q+++ Sbjct: 348 DMALVQRLSCTD---IVVLDEADRLLQDGHFDEFVKILELFGKHRPRDNKELEWKWQTLV 404 Query: 322 MSATSSPDI--------------DKLTKLLLHNPFVLTL------------TEVGHAKDD 423 SAT S D+ +++ L+ N +L L T V + Sbjct: 405 FSATFSRDLFGKLDKHLKSNKNKEEMGSSLIDNDEILQLLNDKLKFKDSKPTLVDANPKE 464 Query: 424 VVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSA 603 +V + + + C + L+F NSID+ RL FL + + Sbjct: 465 MVAGQITEALVECGPTERDLYLYYFLLLYPGST--LVFANSIDSVKRLAPFLNNLKVPTF 522 Query: 604 VLNAELPQNSRLHIIEAF 657 +++ + Q RL +E F Sbjct: 523 SIHSSMIQKQRLRTLERF 540
>DED1_ASPOR (Q2UGK3) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 675 Score = 46.2 bits (108), Expect = 9e-05 Identities = 48/191 (25%), Positives = 77/191 (40%), Gaps = 5/191 (2%) Frame = +1 Query: 133 NILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALV-----PHI 297 ++LV TP + I +G + +IK +ILDEAD +L E ++ +V PH+ Sbjct: 325 DLLVATPGRLVDLIERGRISLVNIK----YLILDEADRMLDMGFEPQIRRIVEGEDMPHV 380 Query: 298 PRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDX 477 Q+++ SAT DI L + L + L++ VG + N+ Q D Sbjct: 381 -NDRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSE-----NITQKVEYVEDHDK 434 Query: 478 XXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAF 657 LIFV + A L FL + ++ + Q R +E F Sbjct: 435 RSVLLDILHTHGTSGLTLIFVETKRMADSLSDFLLNQRFPATAIHGDRTQRERERALEMF 494 Query: 658 NARLFDYLIAT 690 + L+AT Sbjct: 495 RSGRCPILVAT 505
>DBP6_KLULA (Q6CKZ4) ATP-dependent RNA helicase DBP6 (EC 3.6.1.-)| Length = 630 Score = 46.2 bits (108), Expect = 9e-05 Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 15/206 (7%) Frame = +1 Query: 7 LCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKGI 186 L QVY+ S L + + + + ++ S+ ++ K L P+IL+ TP + + Sbjct: 272 LIHQVYDCLSKLSQGTSLNVSMSKLENSLKEEHNKF-LYNSPDILIITPGRLVDHLQ--- 327 Query: 187 VQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHI--------PRSCQSILMSATSSP 342 ++ +K +L ++LDEAD LL+ ++ + L H+ P + ++ SAT + Sbjct: 328 MESFDLK-TLKFLVLDEADRLLNQSFQNWNQVLFHHLTNDKQDKRPGNVIKMVFSATLTT 386 Query: 343 DIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISC-SAKD------XXXXXXXXX 501 + +KL L LHNP + V K +PK +Q+ ++ +AK Sbjct: 387 NAEKLYNLYLHNPKIFLTDSV---KLYSIPKKLQELNVNIPTAKSLFKPLLLLRIIHDIK 443 Query: 502 XXXXXXXXVLIFVNSIDNAFRLRLFL 579 +L+FV S + + RL L Sbjct: 444 SSASRNAKILVFVKSNEASIRLESLL 469
>FAL1_NEUCR (Q9P735) ATP-dependent RNA helicase fal-1 (EC 3.6.1.-)| Length = 400 Score = 46.2 bits (108), Expect = 9e-05 Identities = 40/186 (21%), Positives = 85/186 (45%) Frame = +1 Query: 133 NILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQ 312 +I+ TP VA I + ++ IK M++LDEAD LL+ + + + ++P + Q Sbjct: 146 HIVSGTPGRVADMIRRRHLRTRHIK----MLVLDEADELLNQGFREQIYDVYRYLPPATQ 201 Query: 313 SILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXX 492 +++SAT D+ +T + +P + + +D++ + ++Q++I+ +D Sbjct: 202 VVVVSATLPYDVLDMTTKFMTDPVRILV-----KRDELTLEGLKQYFIAVEKEDWKFDTL 256 Query: 493 XXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLF 672 +IF N+ L + + + ++ ++PQ R I++ F Sbjct: 257 CDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQGNS 316 Query: 673 DYLIAT 690 LI+T Sbjct: 317 RVLIST 322
>DBP6_CANGA (Q6FST5) ATP-dependent RNA helicase DBP6 (EC 3.6.1.-)| Length = 651 Score = 45.8 bits (107), Expect = 1e-04 Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 10/202 (4%) Frame = +1 Query: 7 LCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKGI 186 L QV+ S L E + + + ++ S +++ +L L P+I +TTP + ++ Sbjct: 290 LINQVFQTMSQLAEGTSLVITVSKLENSFNEEHKRL-LKTEPDIFITTPGRLVDHLTNSS 348 Query: 187 VQGSSIKESLSMMILDEADLLLSYRCEDDLKALVP--------HIPRSCQSILMSATSSP 342 + ++K ++LDEAD LL+ ++ + ++ +P S ++ SAT + Sbjct: 349 ISLRNLK----FLVLDEADRLLNQSFQNWIPEVMSKFKSDKFDQMPGSIIKMVFSATLTT 404 Query: 343 DIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISC-SAKDXXX-XXXXXXXXXXX 516 + +KL L L+NP TL K +P +Q++ + SAK Sbjct: 405 NTEKLNDLQLYNP---TLFATDSVKLYNLPPTLQEYQLQIPSAKSVYKPLYLLKLLEQLS 461 Query: 517 XXXVLIFVNSIDNAFRLRLFLE 582 L+FV S +++ +L + L+ Sbjct: 462 GGKTLVFVRSNESSLKLEVLLK 483
>DHH1_CANAL (Q5AAW3) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 549 Score = 45.8 bits (107), Expect = 1e-04 Identities = 43/192 (22%), Positives = 77/192 (40%) Frame = +1 Query: 82 TASMSDKDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYR 261 T S +D + L P +ILV TP V ++ +V S + ++DEAD +LS Sbjct: 133 TGGTSLRDDIVRLHDPVHILVGTPGRVLDLAARKVVDLSECP----LFVMDEADKMLSRE 188 Query: 262 CEDDLKALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNV 441 + ++ ++ P + Q++L SAT + L P+ + L D++ K + Sbjct: 189 FKGIIEQILEFFPPNRQALLFSATFPLAVKSFMDKHLTKPYEINL------MDELTLKGI 242 Query: 442 QQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAEL 621 QF+ K + IF NS + L + + +A++ Sbjct: 243 SQFYAFVEEKQKLHCLNTLFSKLQINQSI-IFCNSTNRVELLAKKITELGYSCYYSHAKM 301 Query: 622 PQNSRLHIIEAF 657 PQ +R + F Sbjct: 302 PQQARNKVFHEF 313
>FAL1_GIBZE (Q4IAA0) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 401 Score = 45.8 bits (107), Expect = 1e-04 Identities = 40/186 (21%), Positives = 85/186 (45%) Frame = +1 Query: 133 NILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQ 312 +I+ TP VA I + ++ IK M++LDEAD LL+ + + + ++P + Q Sbjct: 147 HIVSGTPGRVADMIRRRHLRTRHIK----MLVLDEADELLNKGFREQIYDVYRYLPPATQ 202 Query: 313 SILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXX 492 +++SAT D+ +T + +P + + +D++ + ++Q++I+ +D Sbjct: 203 VVVVSATLPYDVLDMTTKFMTDPVRILV-----KRDELTLEGLKQYFIAVEKEDWKFDTL 257 Query: 493 XXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLF 672 +IF N+ L + + + ++ ++PQ R I++ F Sbjct: 258 CDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQGNS 317 Query: 673 DYLIAT 690 LI+T Sbjct: 318 RVLIST 323
>MAK5_CANAL (Q59ZH9) ATP-dependent RNA helicase MAK5 (EC 3.6.1.-)| Length = 782 Score = 45.8 bits (107), Expect = 1e-04 Identities = 57/249 (22%), Positives = 103/249 (41%), Gaps = 31/249 (12%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLK-IVQVTASMSDKDIKLALSGPPNILVTTPACVAACISK 180 EL QV + + L + + IV +T +S + + L P I+V TP + + + Sbjct: 288 ELAHQVVDHLNKLAKYSPLSTRGIVSITGGLSIQKQQRLLRHGPGIIVATPGRMLELV-Q 346 Query: 181 GIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVP----HIPRS------CQSILMSA 330 G + + S+ +++LDEAD LL D+ + ++ + P+S Q+++ SA Sbjct: 347 GDSELAKRLASIDIIVLDEADRLLQDGHFDEFEKILELFGKNRPKSKSIEWKWQTLVFSA 406 Query: 331 TSSPDI---------DKLTKLLLHNPFVLTLTEVGHAKD-----------DVVPKNVQQF 450 T S D+ K + L+ ++ V L E KD ++V + + Sbjct: 407 TFSRDLFRKLDRHQKGKSSSLMGNDEIVQLLNEKLKFKDKKPTLVDANPKEIVSGQITEA 466 Query: 451 WISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQN 630 + C + L+F NSID+ RL L I + +++ + Q Sbjct: 467 LVECGPTERDLYLYYFLLMYKGST--LVFANSIDSVKRLVPLLNNLNIPAFSIHSSMIQK 524 Query: 631 SRLHIIEAF 657 RL +E F Sbjct: 525 QRLRALEKF 533
>IF4A6_TOBAC (Q40469) Eukaryotic initiation factor 4A-6 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-6) (eIF-4A-6) (Fragment) Length = 253 Score = 45.8 bits (107), Expect = 1e-04 Identities = 41/189 (21%), Positives = 87/189 (46%), Gaps = 3/189 (1%) Frame = +1 Query: 133 NILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQ 312 +++V TP V + + ++ +IK M +LDEAD +LS +D + + +P Q Sbjct: 1 HVVVGTPGRVFDMLRRQSLRPDNIK----MFVLDEADEMLSRGFKDQIYDIFQLLPPKIQ 56 Query: 313 SILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXX 492 + SAT P+ ++T+ ++ P + + +D++ + ++QF+++ ++ Sbjct: 57 VGIFSATMPPEALEITRKFMNKPVRILV-----KRDELTLEGIKQFYVNVDKEEWKLETL 111 Query: 493 XXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNA---ELPQNSRLHIIEAFNA 663 +IFVN+ ++ +K R ++A ++ QN+R I+ F + Sbjct: 112 CDLYETLAITQSVIFVNT---RRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRS 168 Query: 664 RLFDYLIAT 690 LI T Sbjct: 169 GSSRVLITT 177
>DBPA_ECOLI (P21693) ATP-independent RNA helicase dbpA (EC 3.6.1.-)| Length = 457 Score = 45.8 bits (107), Expect = 1e-04 Identities = 39/154 (25%), Positives = 69/154 (44%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QV E L + KI+ + + +L P+I+V TP + + KG Sbjct: 82 ELADQVAGELRRLARFLPNT-KILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKG 140 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 V ++L+ +++DEAD +L D + ++ P S Q++L SAT I ++ Sbjct: 141 TVS----LDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISG 196 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCS 465 + +P + + D +P QQF+ + S Sbjct: 197 RVQRDPLAIEIDST-----DALPPIEQQFYETSS 225
>DBP5_SCHPO (Q09747) ATP-dependent RNA helicase dbp5 (EC 3.6.1.-)| Length = 503 Score = 45.8 bits (107), Expect = 1e-04 Identities = 45/222 (20%), Positives = 87/222 (39%), Gaps = 2/222 (0%) Frame = +1 Query: 31 ASSLLELCTSKLKIVQVTASMSDKD-IKLALSGPPNILVTTPACVAACISKGIVQGSSIK 207 A ++++ T K +V + KD + I++ TP V + + + IK Sbjct: 197 ARQIMDVVTEMGKYTEVKTAFGIKDSVPKGAKIDAQIVIGTPGTVMDLMKRRQLDARDIK 256 Query: 208 ESLSMMILDEADLLLSYRCEDDLKALVPHI-PRSCQSILMSATSSPDIDKLTKLLLHNPF 384 + +LDEAD +L + D + H+ PR+ Q +L SAT S ++K + F Sbjct: 257 ----VFVLDEADNMLDQQGLGDQSMRIKHLLPRNTQIVLFSATFSERVEKYAE-----RF 307 Query: 385 VLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFR 564 E+ +++ + ++Q ++ C +++ +IF D A Sbjct: 308 APNANEIRLKTEELSVEGIKQLYMDCQSEEHKYNVLVELYGLLTIGQSIIFCKKKDTAEE 367 Query: 565 LRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 + + A L L R I+++F L+ T Sbjct: 368 IARRMTADGHTVACLTGNLEGAQRDAIMDSFRVGTSKVLVTT 409
>DBP3_DEBHA (Q6BZ77) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 527 Score = 45.8 bits (107), Expect = 1e-04 Identities = 48/231 (20%), Positives = 100/231 (43%), Gaps = 2/231 (0%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q+Y+ L + LK V V +S + +L +++V TP + ++ G Sbjct: 197 ELALQIYDNLVDLT--ANTPLKCVAVYGGVSKHEQVSSLRNA-SVVVATPGRLIDLLNDG 253 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPR-SCQSILMSATSSPDIDKLT 360 + +S+ ++LDEAD +L E D+K+++ + Q+++ +AT ++ +L Sbjct: 254 ALS----LDSIEYLVLDEADRMLEKGFEQDIKSVMQQTNHANRQTLMFTATWPKEVRELA 309 Query: 361 KLLLHNPFVLTLTEVGH-AKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIF 537 +++P +++ + + + + + V+ K VLIF Sbjct: 310 STFMNSPVKVSIGDRNELSANKRITQIVEVIEPYDKEKKLLSLLRKYQSGSNKDDKVLIF 369 Query: 538 VNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 A R+ L + + + + ++ +L Q R + AF A L+AT Sbjct: 370 ALYKKEATRIENLLVRNSFKVSAVHGDLSQQQRTSALGAFKAGKTTLLLAT 420
>SPB4_NEUCR (Q873H9) ATP-dependent rRNA helicase spb-4 (EC 3.6.1.-)| Length = 654 Score = 45.8 bits (107), Expect = 1e-04 Identities = 31/124 (25%), Positives = 65/124 (52%), Gaps = 5/124 (4%) Frame = +1 Query: 100 KDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLK 279 +D+ L PN+L+ TP +A +S V+ + + ++I+DEAD LL ++L Sbjct: 155 EDLGTFLRLSPNLLIGTPGRLAELLSSAYVKAPA--STFEVLIMDEADRLLDMGFANELN 212 Query: 280 ALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLT-----LTEVGHAKDDVVPKNVQ 444 ++ ++P+ ++ L SA+ S +++L + L P +T L + G ++ P ++Q Sbjct: 213 RILGYLPKQRRTGLFSASLSDAVERLITVGLLYPHKITVRVKSLKDGGIIQERKTPMSLQ 272 Query: 445 QFWI 456 ++ Sbjct: 273 MSYL 276
>SPB4_KLULA (Q6CN92) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)| Length = 596 Score = 45.8 bits (107), Expect = 1e-04 Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 16/245 (6%) Frame = +1 Query: 4 ELCQQVYNEASSLLEL-------CTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACV 162 EL Q+++ L+ S+L + +AS+ D DI P ILV TP V Sbjct: 94 ELASQIHDVIEDFLKYYPDNLYPIRSQLLVGTSSASVRD-DINSFTDNRPQILVGTPGRV 152 Query: 163 AACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSP 342 + K V+ +S ++LDEAD LL + D++ ++ +P+ ++ L SAT Sbjct: 153 LDFLQKTNVKTASC----GTVVLDEADKLLDLNFQKDVETILKMLPKQRRTGLFSATIES 208 Query: 343 DIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXX 522 ++ K + NP +V + P ++ +I KD Sbjct: 209 AGAQIFKTGMRNP-----VKVAVKSNSSAPSSLSINYIVIPPKDKLQLLLTLLNNYRFKK 263 Query: 523 XVLIFVNSIDNAF---------RLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFD 675 ++ F I + L L + + S L+ +L SR+ +++F + L D Sbjct: 264 CIVYFPTCISVTYFYAFINHLKELNLIQDDLKLFS--LHGKLQTQSRMKTLDSFTSNLTD 321 Query: 676 YLIAT 690 ++ T Sbjct: 322 AVLFT 326
>HAS1_ASPOR (Q2UUN6) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 596 Score = 45.8 bits (107), Expect = 1e-04 Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 2/157 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q++ + LL + IV A+ + KL N+LV TP + + Sbjct: 202 ELALQIFGQVRELLAHHSQTYGIVIGGANRRAEAEKLMKG--VNLLVATPGRLLDHLQN- 258 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP-RSCQSILMSATSSPDIDKLT 360 QG K +L +I+DEAD +L ED+++ + +P + Q++L SAT + ++ L Sbjct: 259 -TQGFVFK-NLRTLIIDEADRILEVGFEDEMRQIAKILPSENRQTMLFSATQTTKVEDLA 316 Query: 361 KLLLH-NPFVLTLTEVGHAKDDVVPKNVQQFWISCSA 468 ++ L P + V H K+ + ++Q ++ C A Sbjct: 317 RISLRPGPLYI---NVDHRKEHSTVEGLEQGYVICEA 350
>SPB4_CRYNE (Q5KCY8) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)| Length = 748 Score = 45.4 bits (106), Expect = 2e-04 Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 1/103 (0%) Frame = +1 Query: 130 PNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCED-DLKALVPHIPRS 306 P+IL+ TP +AA + L +++LDEAD LLS D++ ++ H+P+ Sbjct: 173 PSILIGTPGRLAAFLLNPRGLAIVRVSELDVLVLDEADRLLSSPDHRRDVERIMRHLPKQ 232 Query: 307 CQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPK 435 ++ L SAT + ++++ L L NP + + KD PK Sbjct: 233 RRTHLFSATMTDAVEEMIGLGLRNPVRIVVNLKDKRKDGEEPK 275
>DBP3_EMENI (Q5AWA6) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 498 Score = 45.4 bits (106), Expect = 2e-04 Identities = 50/232 (21%), Positives = 94/232 (40%), Gaps = 3/232 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q+Y++ E +++ + + + + AL ++V TP + + G Sbjct: 157 ELAMQIYDQLVKFAEKVD--IQVACIFGGVKKDEQREALKSAA-VVVATPGRLKDLQNDG 213 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRS-CQSILMSATSSPDIDKLT 360 + +K ++LDEAD +L E D+K ++ +P S Q+++ +AT P + L Sbjct: 214 SLDLGRVK----YLVLDEADRMLDKGFEQDIKDIISPMPVSKRQTVMFTATWPPIVRNLA 269 Query: 361 KLLLHNPFVLTLTEVGHAKDDVVPKNVQQF--WISCSAKDXXXXXXXXXXXXXXXXXVLI 534 + +P +T+ A D ++Q + K+ VL Sbjct: 270 STFMTSPVTVTIGGDPSA-DPRANSRIKQVVEVVKPHEKEQRLVQILNRHQRGTPDKVLA 328 Query: 535 FVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 F A R+ L + A ++ +L Q R +EAF + L+AT Sbjct: 329 FCLYKKEAMRVERLLRTKGFKVAGIHGDLSQQERFRSLEAFKSGAATVLVAT 380
>HAS1_EMENI (Q5BBY1) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 609 Score = 45.4 bits (106), Expect = 2e-04 Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 2/157 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q++ A LL + IV A+ + KL N+L+ TP + + Sbjct: 211 ELALQIFGVARELLTAHSQTYGIVIGGANRRAEAEKLTKG--VNLLIATPGRLLDHLQN- 267 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP-RSCQSILMSATSSPDIDKLT 360 + ++L +++DEAD +L ED+++ ++ +P Q++L SAT + ++ L Sbjct: 268 --TPGFVFKNLKTLVIDEADRILEVGFEDEMRQIIKILPNEDRQTMLFSATQTTKVEDLA 325 Query: 361 KLLLH-NPFVLTLTEVGHAKDDVVPKNVQQFWISCSA 468 ++ L P + V H K+ + ++Q ++ C A Sbjct: 326 RISLRPGPLYI---NVDHRKEHSTVEGLEQGYVICEA 359
>MAK5_SCHPO (O74393) ATP-dependent RNA helicase mak5 (EC 3.6.1.-)| Length = 648 Score = 45.4 bits (106), Expect = 2e-04 Identities = 52/232 (22%), Positives = 98/232 (42%), Gaps = 23/232 (9%) Frame = +1 Query: 64 LKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEAD 243 ++++ +T ++ + + L+ P+++V TP + + I++ + G+ K + ++LDEAD Sbjct: 221 IRVMSITGGLAVQKQQRLLNKHPHVVVATPGRLWSVINENNLTGNFKK--IKCLVLDEAD 278 Query: 244 LLLSYRCEDDLKALVP------HIPRSCQSILMSATSSPDIDKLTKLLL--------HNP 381 LL ++L L+ H R Q+ + SAT + + K + ++P Sbjct: 279 RLLQKSHFEELSKLLEILGNPMHTQR--QTFIFSATFDEGLQQRLKKNMKGNITEKYNSP 336 Query: 382 FVLTLTEV---GHAK------DDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLI 534 L EV G K V V + I C+ + ++ Sbjct: 337 MENMLKEVRFFGKPKFLDANPQSAVASRVLEGLIECAPAE--KDLYLYYLIMRYPGKTMV 394 Query: 535 FVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 F N I++ R+ FL + + S L+A+L Q RL +E F L+ T Sbjct: 395 FANGIEDIKRITPFLNELKVPSYPLHAQLDQKKRLQSLEKFKNNPKGVLVCT 446
>FAL1_CRYNE (Q5KJJ2) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 396 Score = 45.4 bits (106), Expect = 2e-04 Identities = 33/161 (20%), Positives = 73/161 (45%) Frame = +1 Query: 208 ESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFV 387 + + M+ILDE+D LL+ +D + + ++P + Q +++SAT D+ ++T + +P Sbjct: 164 KDIKMLILDESDELLNKGFKDQIYDIYRYLPPATQVVVVSATLPHDVLEMTTKFMTDPVR 223 Query: 388 LTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRL 567 + + +D++ + ++QF+++ +D +IF N+ L Sbjct: 224 ILV-----KRDELTLEGIKQFFVAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWL 278 Query: 568 RLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 + + + ++ E+ Q R I+ F LI T Sbjct: 279 TEKMREANFTVSSMHGEMVQKERDAIMAEFRGGQSRVLITT 319
>DBP6_DEBHA (Q6BPT8) ATP-dependent RNA helicase DBP6 (EC 3.6.1.-)| Length = 679 Score = 45.4 bits (106), Expect = 2e-04 Identities = 57/240 (23%), Positives = 104/240 (43%), Gaps = 29/240 (12%) Frame = +1 Query: 58 SKLKIVQVTASMSDKDIKLAL-SGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILD 234 + L IV + +S K+ + L + P+I+V+TP + ++ G + S+K +L +++D Sbjct: 340 TNLSIVSLKNDLSIKEEGIKLQTNEPDIIVSTPGRLVDHLTNGYI---SLK-NLQYLVID 395 Query: 235 EADLLLSYRCEDDLKALVPHIPR---------------SCQSILMSATSSPDIDKLTKLL 369 EAD LL+ ++ + L+ I + Q ++ SAT + D KL+ L Sbjct: 396 EADRLLNQSFQNWCQILISKIDEFTNIKERNISNSWKLNVQKMIFSATLTTDAGKLSLLK 455 Query: 370 LHNPFVLTLTEVGHAKDDV--VPKNVQQFWISC-SAKDXX--XXXXXXXXXXXXXXXVLI 534 H P ++ + +++ +P + +F + SAK VLI Sbjct: 456 FHKPRLIIVNNKEQLVNEMFSLPATLNEFKLQFGSAKSSLKPLILSKFLLSKNKLANVLI 515 Query: 535 FVNSIDNAFRLRLFLEKF-------AIRSAVLNAELPQNS-RLHIIEAFNARLFDYLIAT 690 F S D + RL L I A +N+ S R I++ F+ + + L+AT Sbjct: 516 FTKSNDASLRLSRLLSLIMNKLGSETINIAYINSTNNTTSVRSKILKDFSKQTINILVAT 575
>FAL1_EMENI (Q5AUL4) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 399 Score = 45.4 bits (106), Expect = 2e-04 Identities = 40/186 (21%), Positives = 84/186 (45%) Frame = +1 Query: 133 NILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQ 312 +++ TP VA I + ++ IK M++LDEAD LL+ + + + ++P + Q Sbjct: 145 HVVSGTPGRVADMIRRRHLRTRHIK----MLVLDEADELLNRGFREQIYDVYRYLPPATQ 200 Query: 313 SILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXX 492 +++SAT D+ +T + +P V +D++ + ++Q++I+ ++ Sbjct: 201 VVVVSATLPYDVLDMTTKFMTDP-----VRVLVKRDELTLEGIKQYFIAVEKEEWKFDTL 255 Query: 493 XXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLF 672 +IF N+ L + + + ++ E+PQ R I++ F Sbjct: 256 CDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNS 315 Query: 673 DYLIAT 690 LI+T Sbjct: 316 RVLIST 321
>PIT_DROME (Q9VD51) Probable ATP-dependent RNA helicase pitchoune (EC 3.6.1.-)| Length = 680 Score = 45.4 bits (106), Expect = 2e-04 Identities = 31/113 (27%), Positives = 58/113 (51%) Frame = +1 Query: 133 NILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQ 312 NILV TP + + + ++L +I+DE D +L E++LK ++ +P+ Q Sbjct: 311 NILVATPGRLLDHLQNS---PDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRRQ 367 Query: 313 SILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAK 471 ++L SAT + I+ L+KL L + + V +D ++Q +I C ++ Sbjct: 368 TMLFSATQTARIEALSKLALKSEPI--YVGVHDNQDTATVDGLEQGYIVCPSE 418
>FAL1_ASPOR (Q2UAK1) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 398 Score = 45.4 bits (106), Expect = 2e-04 Identities = 40/186 (21%), Positives = 84/186 (45%) Frame = +1 Query: 133 NILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQ 312 +++ TP VA I + ++ IK M++LDEAD LL+ + + + ++P + Q Sbjct: 144 HVVSGTPGRVADMIRRRHLRTRHIK----MLVLDEADELLNRGFREQIYDVYRYLPPATQ 199 Query: 313 SILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXX 492 +++SAT D+ +T + +P V +D++ + ++Q++I+ ++ Sbjct: 200 VVVVSATLPYDVLDMTTKFMTDP-----VRVLVKRDELTLEGIKQYFIAVEKEEWKFDTL 254 Query: 493 XXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLF 672 +IF N+ L + + + ++ E+PQ R I++ F Sbjct: 255 CDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNS 314 Query: 673 DYLIAT 690 LI+T Sbjct: 315 RVLIST 320
>FAL1_ASPFU (Q4WEB4) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 398 Score = 45.4 bits (106), Expect = 2e-04 Identities = 40/186 (21%), Positives = 84/186 (45%) Frame = +1 Query: 133 NILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQ 312 +++ TP VA I + ++ IK M++LDEAD LL+ + + + ++P + Q Sbjct: 144 HVVSGTPGRVADMIRRRHLRTRHIK----MLVLDEADELLNRGFREQIYDVYRYLPPATQ 199 Query: 313 SILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXX 492 +++SAT D+ +T + +P V +D++ + ++Q++I+ ++ Sbjct: 200 VVVVSATLPYDVLDMTTKFMTDP-----VRVLVKRDELTLEGIKQYFIAVEKEEWKFDTL 254 Query: 493 XXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLF 672 +IF N+ L + + + ++ E+PQ R I++ F Sbjct: 255 CDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNS 314 Query: 673 DYLIAT 690 LI+T Sbjct: 315 RVLIST 320
>HAS1_YEAST (Q03532) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-) (Helicase| associated with SET1 protein 1) Length = 505 Score = 45.4 bits (106), Expect = 2e-04 Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 3/158 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACI--S 177 EL Q++ A L+E + IV A+ + KL N+L+ TP + + + Sbjct: 125 ELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKLMKG--VNMLIATPGRLLDHLQNT 182 Query: 178 KGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP-RSCQSILMSATSSPDIDK 354 KG V ++L +I+DEAD +L ED+++ ++ +P QS+L SAT + ++ Sbjct: 183 KGFVF-----KNLKALIIDEADRILEIGFEDEMRQIIKILPNEDRQSMLFSATQTTKVED 237 Query: 355 LTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSA 468 L ++ L P L + V D+ ++Q ++ C + Sbjct: 238 LARISL-RPGPLFINVVPET-DNSTADGLEQGYVVCDS 273
>DDX41_MOUSE (Q91VN6) Probable ATP-dependent RNA helicase DDX41 (EC 3.6.1.-)| (DEAD box protein 41) Length = 622 Score = 45.1 bits (105), Expect = 2e-04 Identities = 46/209 (22%), Positives = 79/209 (37%) Frame = +1 Query: 64 LKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEAD 243 L+ MS K+ + +++V TP + + K +V + + LDEAD Sbjct: 292 LRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVS----LDICRYLALDEAD 347 Query: 244 LLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDD 423 ++ E D++ + + Q++L SAT I K L P + + G A D Sbjct: 348 RMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLD 407 Query: 424 VVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSA 603 V+ + V+ K+ VLIF + + +L + + Sbjct: 408 VI-QEVEY------VKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAV 460 Query: 604 VLNAELPQNSRLHIIEAFNARLFDYLIAT 690 ++ Q R IEAF D L+AT Sbjct: 461 AIHGGKDQEERTKAIEAFREGKKDVLVAT 489
>DDX41_HUMAN (Q9UJV9) Probable ATP-dependent RNA helicase DDX41 (EC 3.6.1.-)| (DEAD box protein 41) (DEAD box protein abstrakt homolog) Length = 622 Score = 45.1 bits (105), Expect = 2e-04 Identities = 46/209 (22%), Positives = 79/209 (37%) Frame = +1 Query: 64 LKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEAD 243 L+ MS K+ + +++V TP + + K +V + + LDEAD Sbjct: 292 LRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVS----LDICRYLALDEAD 347 Query: 244 LLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDD 423 ++ E D++ + + Q++L SAT I K L P + + G A D Sbjct: 348 RMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLD 407 Query: 424 VVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSA 603 V+ + V+ K+ VLIF + + +L + + Sbjct: 408 VI-QEVEY------VKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAV 460 Query: 604 VLNAELPQNSRLHIIEAFNARLFDYLIAT 690 ++ Q R IEAF D L+AT Sbjct: 461 AIHGGKDQEERTKAIEAFREGKKDVLVAT 489
>DBP3_SCHPO (Q10202) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 578 Score = 45.1 bits (105), Expect = 2e-04 Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 21/250 (8%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q Y +SL++ K +V A S++ + ++++ TP + I+ G Sbjct: 247 ELAIQTYENLNSLIQGTNLKAVVVYGGAPKSEQ---ARAAKNASVIIGTPGRLLDLINDG 303 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP-----RSCQSILMSATSSPDI 348 + S + ++LDEAD +L E D++ ++ H P S Q++ SAT + Sbjct: 304 SIDCSQV----GYLVLDEADRMLDTGFEQDIRNIISHTPDPTRNGSRQTVFFSATWPESV 359 Query: 349 DKLTKLLLHNPFVLT-----------LTEVGHAKDDVVPK-----NVQQFWISCSAKDXX 480 L L +P +T +T++ DD K N+ + +S KD Sbjct: 360 RALAATFLKDPVKITIGSDELAASQNITQIVEILDDPRSKERMLDNLLRKHLSSGGKD-- 417 Query: 481 XXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFN 660 +LIFV A R+ L + ++ ++ Q +RL + F Sbjct: 418 -------------DKILIFVLYKKEAARVEGTLAR-KYNVVGIHGDMSQGARLQALNDFK 463 Query: 661 ARLFDYLIAT 690 + L+AT Sbjct: 464 SGKCPVLVAT 473
>FAL1_YARLI (Q6C347) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 397 Score = 44.7 bits (104), Expect = 3e-04 Identities = 37/191 (19%), Positives = 84/191 (43%) Frame = +1 Query: 118 LSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHI 297 L ++ TP I KG ++ ++K M+ILDEAD LL+ ++ + + ++ Sbjct: 139 LEAGQQVVSGTPGRCLDMIKKGCLRTKNLK----MLILDEADELLNKGFQEQIYDIYRYL 194 Query: 298 PRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDX 477 P + Q +++SAT + ++T + +P + + +D++ + ++Q++I+ ++ Sbjct: 195 PAATQVVVVSATLPHSVLEMTSKFMTDPVRILV-----KRDELTLEGLKQYFIAVEQEEW 249 Query: 478 XXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAF 657 +IF N+ L ++ ++ ++ Q R I+ F Sbjct: 250 KFDTLCDLYDTLTITQAVIFCNTKKKVDWLTQQMKDNNFTVCSMHGDMAQKDRDSIMNEF 309 Query: 658 NARLFDYLIAT 690 + LI+T Sbjct: 310 RSGRSRVLIST 320
>DBP7_KLULA (Q6CK32) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-)| Length = 740 Score = 44.7 bits (104), Expect = 3e-04 Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 13/138 (9%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q+Y S L + C + + + K K L N ++ TP V + Sbjct: 236 ELANQIYQVTSELAQCCHFLVPCLLIGGERK-KSEKARLRKGANFIIGTPGRVLDHLQNT 294 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALV-------------PHIPRSCQSILM 324 V + SL ++LDE D L+ E+ LK ++ P +P+ +L Sbjct: 295 KVIKEQLAPSLRYVVLDEGDKLMELGFEETLKEILNIIHGIDIDTHQFPKLPKRILHVLC 354 Query: 325 SATSSPDIDKLTKLLLHN 378 SAT ++ KL + L N Sbjct: 355 SATVKGNVTKLGNVTLQN 372
>SPB42_CANAL (Q59NP8) ATP-dependent rRNA helicase SPB42 (EC 3.6.1.-)| Length = 631 Score = 44.7 bits (104), Expect = 3e-04 Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 1/95 (1%) Frame = +1 Query: 100 KDIKLALSGPPNILVTTPACVAACISKGIVQGSSIK-ESLSMMILDEADLLLSYRCEDDL 276 +D+ L+ P IL+ TP + + SIK SL ++ILDEAD LL + E D+ Sbjct: 142 EDLNQFLTNQPQILIGTPGRILEFLGSS----QSIKTSSLEIVILDEADKLLDFSFEKDV 197 Query: 277 KALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNP 381 ++ +P+ ++ L SAT S + + + ++NP Sbjct: 198 INILKKLPKQRRTGLFSATISSAGNTIFRTGMNNP 232
>SPB41_CANAL (Q59N29) ATP-dependent rRNA helicase SPB41 (EC 3.6.1.-)| Length = 631 Score = 44.7 bits (104), Expect = 3e-04 Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 1/95 (1%) Frame = +1 Query: 100 KDIKLALSGPPNILVTTPACVAACISKGIVQGSSIK-ESLSMMILDEADLLLSYRCEDDL 276 +D+ L+ P IL+ TP + + SIK SL ++ILDEAD LL + E D+ Sbjct: 142 EDLNQFLTNQPQILIGTPGRILEFLGSS----QSIKTSSLEIVILDEADKLLDFSFEKDV 197 Query: 277 KALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNP 381 ++ +P+ ++ L SAT S + + + ++NP Sbjct: 198 INILKKLPKQRRTGLFSATISSAGNTIFRTGMNNP 232
>PRP28_ASPFU (Q4WPE9) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 796 Score = 44.7 bits (104), Expect = 3e-04 Identities = 45/249 (18%), Positives = 93/249 (37%), Gaps = 20/249 (8%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQ+ EA + +V + S ++ +L I++ TP + CI + Sbjct: 453 ELAQQIEIEARKFTQ--PLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERR 510 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP--------------------R 303 ++ + +I+DEAD ++ E+ + ++ +P R Sbjct: 511 LL----VLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTEEAENSAAMRSHR 566 Query: 304 SCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXX 483 Q+++ +AT ++++ + L P ++T+ G A D V Q+ + Sbjct: 567 YRQTMMYTATMPSAVERIARKYLRRPAIVTIGSAGEAVDTV----EQRVEMIAGEDKRKK 622 Query: 484 XXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNA 663 +++FVN N + +++ S L+ Q R + + Sbjct: 623 RLADILSSGEFRPPIIVFVNIKRNCDAIAREIKQMGFSSVTLHGSKTQEQREAALASVRN 682 Query: 664 RLFDYLIAT 690 D L+AT Sbjct: 683 GSTDVLVAT 691
>SUB2_YARLI (Q6CH89) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 441 Score = 44.7 bits (104), Expect = 3e-04 Identities = 47/215 (21%), Positives = 87/215 (40%), Gaps = 3/215 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGP--PNILVTTPACVAACIS 177 EL Q+ NE + + V S KDI+L + P+++V TP + A + Sbjct: 136 ELAYQIMNEYARFSKYLPDVKTAVFYGGSPIQKDIELIQNKETSPHVIVATPGRLHALVR 195 Query: 178 KGIVQGSSIKESLSMMILDEADLLLSY-RCEDDLKALVPHIPRSCQSILMSATSSPDIDK 354 ++ ++K ++DE D +L D++ + PR Q ++ SAT S +I Sbjct: 196 DKHLRLGNVKT----FVIDECDKVLDQIDMRRDVQEIFRVTPRQKQVMMFSATLSQEIRP 251 Query: 355 LTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLI 534 + K + +P + + + G + +QQ+++ K V+I Sbjct: 252 ICKKFMSSPLEILVDDEG----KLTLHGLQQYYVDVEEK-SKNRKLGDLLDNLEFNQVII 306 Query: 535 FVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRL 639 FV S A L L +++ +PQ R+ Sbjct: 307 FVKSTSRANGLSQVLNANGFPCTAVHSGIPQEERI 341
>DBP8_DEBHA (Q6BGU8) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 441 Score = 44.7 bits (104), Expect = 3e-04 Identities = 54/214 (25%), Positives = 87/214 (40%), Gaps = 8/214 (3%) Frame = +1 Query: 73 VQVTASMSDKDI---KLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEAD 243 ++V+ + +DI L L P+ +V TP +A I + +ILDEAD Sbjct: 98 IKVSVIVGGEDIVKQALELQRRPHFVVATPGRLADHILNSGEDTVCGLRRVKYLILDEAD 157 Query: 244 LLLSYRCEDDLKALVPHIPRSC--QSILMSATSSPDIDKLT-KLLLHNPFVLTLTEVGHA 414 LLS DL+ +P + Q++L +AT + + L + + + + EV Sbjct: 158 RLLSNSFGGDLERCFNILPLTDKRQTLLFTATVTDAVRALKDRPVPKGKLPVFIHEVETV 217 Query: 415 KDDVVPKN--VQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKF 588 +P V+ ++ K+ + IF N A LR L K Sbjct: 218 DKVAIPSTLLVKYVFVPSYVKEAYLHSILNLPQYSDSLSI-IFTNRTATAELLRRTLRKL 276 Query: 589 AIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 R A L++E+PQ R + + F A LIAT Sbjct: 277 EFRVASLHSEMPQTERTNSLHRFKAGAAKILIAT 310
>HAS1_CANGA (Q6FIL3) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 494 Score = 44.7 bits (104), Expect = 3e-04 Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 3/158 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACI--S 177 EL Q++ L+E + IV A+ + KL N+LV TP + + + Sbjct: 112 ELALQIFGVVRELMEFHSQTFGIVIGGANRRQEAEKLMKG--VNLLVATPGRLLDHLQNT 169 Query: 178 KGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP-RSCQSILMSATSSPDIDK 354 KG I ++L +++DEAD +L ED+++ ++ +P QS+L SAT + ++ Sbjct: 170 KGF-----IFKNLKALVIDEADRILEIGFEDEMRQIIKILPNEDRQSMLFSATQTTKVED 224 Query: 355 LTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSA 468 L+++ L P L + V D ++Q ++ C + Sbjct: 225 LSRISL-RPGPLFINVVSE-HDSSTADGLEQGYVVCES 260
>MAK5_CANGA (Q6FY67) ATP-dependent RNA helicase MAK5 (EC 3.6.1.-)| Length = 733 Score = 44.7 bits (104), Expect = 3e-04 Identities = 57/255 (22%), Positives = 99/255 (38%), Gaps = 35/255 (13%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSK--LKIVQVTASMS--DKDIKLALSGPPNILVTTPACVAAC 171 EL QQV ++ + K I+ +T +S ++ L G I+V TP Sbjct: 236 ELAQQVTKHLQNVCSMLLKKNPYMILSLTGGLSIQKQERLLKYDGSARIVVATPGRFLEL 295 Query: 172 ISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPR---------SCQSILM 324 I K + + +++LDEAD LL D+ + ++ H+ R Q+++ Sbjct: 296 IEKNEELMKRFAK-IDVLVLDEADRLLQDGHFDEFEKILKHLGRIRKSLKNMEYWQTLIY 354 Query: 325 SATSSPDI-DKLTK---------------------LLLHNPFVLTLTEVGHAKDDVVPKN 438 SAT S D+ DKL L+ F + +D + Sbjct: 355 SATFSTDLFDKLANSSWKKKNNSKDESEMESVLKHLMTKINFKSKPMMIDANPEDKISAQ 414 Query: 439 VQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAE 618 +++ I C+ + LIF NSI++ +L +L I S +++ Sbjct: 415 IKESLIECAPLE--RDLYCYYFVTLYPGTTLIFCNSIESVKKLNAYLINLGINSFQIHSS 472 Query: 619 LPQNSRLHIIEAFNA 663 + Q +RL +E F A Sbjct: 473 MTQKNRLKNLEKFEA 487
>DBP3_CANGA (Q6FS54) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 540 Score = 44.7 bits (104), Expect = 3e-04 Identities = 51/234 (21%), Positives = 96/234 (41%), Gaps = 5/234 (2%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q+Y+ L + +V D+ ++A S N++V TP + I +G Sbjct: 210 ELASQIYDNLVLLTQKVGIDCCVVYGGVPKDDQRRQIAKS---NVVVATPGRLLDLIEEG 266 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHI-PRSCQSILMSATSSPDIDKLT 360 V S + M+LDEAD +L E+D+K ++ + Q+++ +AT ++ +L Sbjct: 267 SVDLSPV----DYMVLDEADRMLEKGFEEDIKRIIGQTKSKDRQTLMFTATWPKEVRELA 322 Query: 361 KLLLHNPFVLTLTEVGHAKDDVVPKNVQQF--WISCSAKDXXXXXXXXXXXX--XXXXXV 528 + P ++ +G+ + K + Q + +K+ V Sbjct: 323 STFMKEPVKVS---IGNRDELSANKRITQIVEVVDPRSKERKLLDLLKKYQSGPKKNDKV 379 Query: 529 LIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 LIF A R+ L + A ++ +L Q R + F + + L+AT Sbjct: 380 LIFALYKKEASRVERNLNYNGYKVAAIHGDLSQQQRTQALNEFKSGKSNLLLAT 433
>DHH1_CANGA (Q6FQU5) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 507 Score = 44.3 bits (103), Expect = 4e-04 Identities = 30/107 (28%), Positives = 54/107 (50%) Frame = +1 Query: 82 TASMSDKDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYR 261 T + +D L L+ ++LV TP V S+ + S S+ ++DEAD +LS Sbjct: 134 TGGTNLRDDILRLNETVHVLVGTPGRVLDLASRKVADLSEC----SLFVMDEADKMLSRD 189 Query: 262 CEDDLKALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTE 402 + ++ ++ +P++ QS+L SAT + + LH P+ + L E Sbjct: 190 FKTIIEQVLTFLPKAHQSLLFSATFPLTVKEFMVKHLHKPYEINLME 236
>ROK1_SCHPO (Q09775) ATP-dependent RNA helicase rok1 (EC 3.6.1.-)| Length = 481 Score = 44.3 bits (103), Expect = 4e-04 Identities = 59/235 (25%), Positives = 91/235 (38%), Gaps = 6/235 (2%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLA-LSGPPNILVTTPACVAACISK 180 ELC+Q+Y +A L + LKI++++ S K L ++ + TP + I Sbjct: 126 ELCEQIYRQAEKLS--FGTSLKIIELSKSNEKIQEKAPKLREKYDMCIGTPMRLVQAIQT 183 Query: 181 GIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSI-----LMSATSSPD 345 G+ E + ++DEAD L E HI +C S L SAT Sbjct: 184 GLSF-----EKVEFFVMDEADRLF----EPGFIEQTDHILSACTSSNICKSLFSATIPSR 234 Query: 346 IDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXX 525 +++L K++ +P + + A D + Q+ S Sbjct: 235 VEELAKVVTVDPIRIIVGLKDAATDSID----QRLLFVGSDTSKIVILRQMISNGELKPR 290 Query: 526 VLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 V+IFV I+ A L L I V++ ELPQ R + F LIAT Sbjct: 291 VVIFVQDIERAKALYTELLFDEIHVGVIHGELPQAKREEALAKFRKGEIWVLIAT 345
>RM62_DROME (P19109) ATP-dependent RNA helicase p62 (EC 3.6.1.-)| Length = 719 Score = 44.3 bits (103), Expect = 4e-04 Identities = 36/185 (19%), Positives = 78/185 (42%) Frame = +1 Query: 136 ILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQS 315 I++ TP + +S G S+ + + ++LDEAD +L E ++ +V I Q+ Sbjct: 407 IVIATPGRLIDFLSAG----STNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQT 462 Query: 316 ILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXX 495 ++ SAT ++ +L + L N + + + + + + + V + Sbjct: 463 LMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSD 522 Query: 496 XXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFD 675 ++IFV + L F+ F +R ++ + Q+ R ++ F + + Sbjct: 523 IYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSN 582 Query: 676 YLIAT 690 L+AT Sbjct: 583 ILVAT 587
>DBP8_YEAST (P38719) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-) (DEAD box| protein 8) Length = 431 Score = 44.3 bits (103), Expect = 4e-04 Identities = 50/233 (21%), Positives = 94/233 (40%), Gaps = 4/233 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q+ + ++L ++ ++ S+ + L L P+ ++ TP +A I Sbjct: 81 ELAMQIAEQFTALGSSMNIRVSVIVGGESIVQQ--ALDLQRKPHFIIATPGRLAHHIMSS 138 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSC--QSILMSATSSPDIDKL 357 ++LDEAD+LL+ D L + +P Q++L +AT + + L Sbjct: 139 GDDTVGGLMRAKYLVLDEADILLTSTFADHLATCISALPPKDKRQTLLFTATITDQVKSL 198 Query: 358 TKLLLHNPFVLTLTEVGHAKDDV-VPKNVQ-QFWISCSAKDXXXXXXXXXXXXXXXXXVL 531 + + D+V +P ++ ++ + + Sbjct: 199 QNAPVQKGKPPLFAYQVESVDNVAIPSTLKIEYILVPEHVKEAYLYQLLTCEEYENKTAI 258 Query: 532 IFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 IFVN A LR L++ +R A L++++PQ R + + F A LIAT Sbjct: 259 IFVNRTMTAEILRRTLKQLEVRVASLHSQMPQQERTNSLHRFRANAARILIAT 311
>RRP3_ASHGO (Q75EW9) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 487 Score = 43.9 bits (102), Expect = 5e-04 Identities = 52/236 (22%), Positives = 96/236 (40%), Gaps = 7/236 (2%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQ+ SL L ++ + M+ D L P+I++ TP + + Sbjct: 145 ELAQQIKETFDSLGSLMG--VRTTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLEVH 202 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQ-SILMSATSSPDIDKLT 360 +G ++++ +++DEAD LL+ + L ++ +IP + + L SAT + IDKL Sbjct: 203 -KRGFALRKQ-QFLVMDEADRLLNMKFGPVLDRILKNIPTKVRTTYLFSATMTSKIDKLQ 260 Query: 361 KLLLHNPFVLTLTEVGHAKDD------VVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXX 522 + L N ++ D VVP ++ ++ + Sbjct: 261 RASLTNTVKCAVSNKYQTVDTLVQTLIVVPGGLKNTFLIYLLNE------------FIGK 308 Query: 523 XVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 ++F + NA R+ + L+ +L QN R ++ F A L+AT Sbjct: 309 TTIVFTRTKANAERISGLCNLLEFSATALHGDLNQNQRTGALDLFKAGKKSILVAT 364
>DHH1_YARLI (Q6C0X2) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 522 Score = 43.9 bits (102), Expect = 5e-04 Identities = 34/130 (26%), Positives = 60/130 (46%) Frame = +1 Query: 64 LKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEAD 243 +K++ T + +D + L ++LV TP V KG+ + + ES M I+DEAD Sbjct: 125 IKVMVTTGGTNLRDDIMRLEDTVHVLVGTPGRVLDLAGKGV---ADLSES-PMFIMDEAD 180 Query: 244 LLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDD 423 LLS ++ ++ P Q +L SAT + LH P+ + L D+ Sbjct: 181 KLLSPDFTPIIEQVLHFFPEDRQILLFSATFPLTVKAFMDRNLHKPYEINL------MDE 234 Query: 424 VVPKNVQQFW 453 + + + Q++ Sbjct: 235 LTLRGITQYY 244
>DDX51_BRARE (Q6DRI7) ATP-dependent RNA helicase DDX51 (EC 3.6.1.-) (DEAD box| protein 51) Length = 652 Score = 43.9 bits (102), Expect = 5e-04 Identities = 66/274 (24%), Positives = 105/274 (38%), Gaps = 45/274 (16%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALS--------GPPNILVTTPAC 159 EL QQV N S+ E S LK+V +T S + ALS +I+V TP Sbjct: 283 ELAQQVSNVFSAYTE--GSSLKVVMITGQKSFAAEQTALSEIRGGVSHSMADIVVATPGR 340 Query: 160 VAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALV----------------- 288 + I+K S + L +I+DEAD ++ + L + Sbjct: 341 LVDHINKN---SSFSLQHLRFLIIDEADRMIDSMHQSWLSQVTKAVYSTPGETHTSVFRR 397 Query: 289 -------------PHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVL----TLTEVGHAK 417 P IP Q +L SAT + + +KL L LH P + +LT+ Sbjct: 398 TVPGPITAASLSPPQIP--LQKLLFSATLTQNPEKLQLLDLHQPRLFSSTHSLTDNPAQS 455 Query: 418 DDV--VPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKF- 588 D P+ + ++++ C+ L F NS + A RL L ++ F Sbjct: 456 QDTFHFPQGLSEYYVPCTF-SKKPLIILHFLLRLKFSPALCFTNSREGAHRLYLLVKLFG 514 Query: 589 AIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 + A +++L R ++ F LI+T Sbjct: 515 GVEVAEFSSKLSPGERQKTLKDFEKGKIPLLIST 548
>PRP5_YEAST (P21372) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 849 Score = 43.9 bits (102), Expect = 5e-04 Identities = 39/157 (24%), Positives = 68/157 (43%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q++ E + E TS + S K I G I+V TP ++ Sbjct: 341 ELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGT-EIVVATPGRFIDILTLN 399 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTK 363 + S K ++ +++DEAD L E + ++ + Q +L SAT + Sbjct: 400 DGKLLSTKR-ITFVVMDEADRLFDLGFEPQITQIMKTVRPDKQCVLFSATFPNKLRSFAV 458 Query: 364 LLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKD 474 +LH+P +T+ G +V +NV+Q + C ++D Sbjct: 459 RVLHSPISITINSKG-----MVNENVKQKFRICHSED 490
>DHH1_ASHGO (Q75BS4) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 484 Score = 43.9 bits (102), Expect = 5e-04 Identities = 31/124 (25%), Positives = 62/124 (50%) Frame = +1 Query: 82 TASMSDKDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYR 261 T + +D + L+ P ++LV TP V S+ + S S+ ++DEAD +LS Sbjct: 132 TGGTNLRDDIMRLNEPVHVLVGTPGRVLDLASRKVADLSEC----SLFVMDEADKMLSRD 187 Query: 262 CEDDLKALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNV 441 + ++ ++ +P++ QS+L SAT + + L+ P+ + L D++ K + Sbjct: 188 FKSLVEQILSFLPQNHQSLLFSATFPLTVKEFMVKHLNKPYEINL------MDELTLKGI 241 Query: 442 QQFW 453 Q++ Sbjct: 242 TQYY 245
>DDX1_RAT (Q641Y8) ATP-dependent RNA helicase DDX1 (EC 3.6.1.-) (DEAD box| protein 1) Length = 740 Score = 43.9 bits (102), Expect = 5e-04 Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 8/164 (4%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTS-KLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISK 180 EL +Q N + + KL+ + + ++ +D L +I+V TP + +S Sbjct: 297 ELAEQTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVST 356 Query: 181 GIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP------RSCQSILMSAT-SS 339 G + S ++ ++LDEAD LLS D + + IP + Q I+ SAT S Sbjct: 357 GKLNLSQVR----FLVLDEADGLLSQGYSDFINRMHNQIPQITSDGKRLQVIVCSATLHS 412 Query: 340 PDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAK 471 D+ KL++ ++H P T V +D VP V + + K Sbjct: 413 FDVKKLSEKIMHFP-----TWVDLKGEDSVPDTVHHVVVPVNPK 451
>DDX1_MOUSE (Q91VR5) ATP-dependent RNA helicase DDX1 (EC 3.6.1.-) (DEAD box| protein 1) Length = 740 Score = 43.9 bits (102), Expect = 5e-04 Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 8/164 (4%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTS-KLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISK 180 EL +Q N + + KL+ + + ++ +D L +I+V TP + +S Sbjct: 297 ELAEQTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVST 356 Query: 181 GIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP------RSCQSILMSAT-SS 339 G + S ++ ++LDEAD LLS D + + IP + Q I+ SAT S Sbjct: 357 GKLNLSQVR----FLVLDEADGLLSQGYSDFINRMHNQIPQITCDGKRLQVIVCSATLHS 412 Query: 340 PDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAK 471 D+ KL++ ++H P T V +D VP V + + K Sbjct: 413 FDVKKLSEKIMHFP-----TWVDLKGEDSVPDTVHHVVVPVNPK 451
>DBP2_CANAL (Q59LU0) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 562 Score = 43.9 bits (102), Expect = 5e-04 Identities = 32/166 (19%), Positives = 73/166 (43%) Frame = +1 Query: 193 GSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQSILMSATSSPDIDKLTKLLL 372 G + + ++ ++LDEAD +L E ++ +V I Q+++ SAT ++ +LT+ L Sbjct: 268 GKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLTRDYL 327 Query: 373 HNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLIFVNSID 552 ++P +T+ + A + + V+ I +K +L+F ++ Sbjct: 328 NDPIQVTIGSLELAASHTITQLVEV--IDEFSKRDRLVKHLESALNEKDNKILVFASTKR 385 Query: 553 NAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 + +L + ++ + QN R +++ F ++AT Sbjct: 386 TCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVAT 431
>DHH1_YEAST (P39517) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-) (DExD/H-box| helicase 1) Length = 506 Score = 43.9 bits (102), Expect = 5e-04 Identities = 32/107 (29%), Positives = 53/107 (49%) Frame = +1 Query: 82 TASMSDKDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYR 261 T + +D L L+ +ILV TP V S+ + S S+ I+DEAD +LS Sbjct: 149 TGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDC----SLFIMDEADKMLSRD 204 Query: 262 CEDDLKALVPHIPRSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTE 402 + ++ ++ +P + QS+L SAT + + LH P+ + L E Sbjct: 205 FKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVKHLHKPYEINLME 251
>DBP8_GIBZE (Q4I662) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 547 Score = 43.9 bits (102), Expect = 5e-04 Identities = 50/238 (21%), Positives = 90/238 (37%), Gaps = 9/238 (3%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q++ + ++ LK + VT + + + P++++ TP +A I Sbjct: 195 ELALQIFEQFKAISS--PQSLKAILVTGGSDMRTQAIEIGKRPHVIIATPGRLADHIRTS 252 Query: 184 IVQGSSIKESLSMMILDEADLLLSYR--------CEDDLKALVPHIPRSCQSILMSATSS 339 + ++LDEAD LL+ E+ L L P R Q++L +AT + Sbjct: 253 GEDTICGLRRVRYVVLDEADRLLNATGPGSMLPDVEECLSVLPPATER--QTLLFTATIT 310 Query: 340 PDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXX 519 P++ L + + + +P ++Q +I Sbjct: 311 PEVRALKDMPIKPGKQPVFVCEVDTQTLAIPATLKQMYIKVPVTHKEHYLHTFLLTEANV 370 Query: 520 X-XVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 V++F N A L L R L+++LPQ R+ + F A L+AT Sbjct: 371 DKTVILFCNRTSTADYLHHLLRMLEHRVTSLHSKLPQRQRIDNLARFRASAARILVAT 428
>SUB2_YEAST (Q07478) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-) (Suppressor| of BRR1 protein 2) Length = 446 Score = 43.9 bits (102), Expect = 5e-04 Identities = 48/221 (21%), Positives = 88/221 (39%), Gaps = 3/221 (1%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGP--PNILVTTPACVAACIS 177 EL Q+ NE + V + KD +L + P+I+V TP + A + Sbjct: 141 ELAYQIRNEYLRFSKYMPDVKTAVFYGGTPISKDAELLKNKDTAPHIVVATPGRLKALVR 200 Query: 178 KGIVQGSSIKESLSMMILDEADLLLS-YRCEDDLKALVPHIPRSCQSILMSATSSPDIDK 354 + + S +K ++DE D +L D++ + PR Q ++ SAT S +I Sbjct: 201 EKYIDLSHVKN----FVIDECDKVLEELDMRRDVQEIFRATPRDKQVMMFSATLSQEIRP 256 Query: 355 LTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXXXXXXXXXVLI 534 + + L NP + + + + + +QQ++I ++ V+I Sbjct: 257 ICRRFLQNPLEIFVDD----EAKLTLHGLQQYYIKLEERE-KNRKLAQLLDDLEFNQVII 311 Query: 535 FVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAF 657 FV S A L L + ++ + Q R+ +AF Sbjct: 312 FVKSTTRANELTKLLNASNFPAITVHGHMKQEERIARYKAF 352
>DBP5_YARLI (Q6C3X7) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 488 Score = 43.9 bits (102), Expect = 5e-04 Identities = 40/185 (21%), Positives = 74/185 (40%) Frame = +1 Query: 136 ILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRSCQS 315 ILV TP VA + K + +K + +LDEAD ++ + ++P S Q Sbjct: 218 ILVGTPGSVAGLLQKKQIDAKHVK----VFVLDEADNMVDSSMGSTCARIKKYLPSSTQV 273 Query: 316 ILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXX 495 +L SAT + L + NP E+ +++ + Q ++ C + Sbjct: 274 VLFSATFPESVLDLAGKMCPNP-----NEIRLKANELNVDAITQLYMDCEDGEEKFKMLE 328 Query: 496 XXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFD 675 +IFV A L + K + ++L+++L + R +++ F Sbjct: 329 ELYSMLTIASSVIFVAQRSTANALYQRMSKNGHKVSLLHSDLSVDERDRLMDDFRFGRSK 388 Query: 676 YLIAT 690 LI+T Sbjct: 389 VLIST 393
>DBP3_YEAST (P20447) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-) (DEAD box| protein 3) (Helicase CA3) Length = 523 Score = 43.9 bits (102), Expect = 5e-04 Identities = 50/234 (21%), Positives = 96/234 (41%), Gaps = 5/234 (2%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL Q+Y+ L + + V ++ I+L S ++V TP + + +G Sbjct: 193 ELASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQLKKS---QVVVATPGRLLDLLQEG 249 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRS-CQSILMSATSSPDIDKLT 360 V S + + ++LDEAD +L E+D+K ++ S Q+++ +AT ++ +L Sbjct: 250 SVDLSQV----NYLVLDEADRMLEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELA 305 Query: 361 KLLLHNPFVLTLTEVGHAKDDVVPKNVQQF--WISCSAKDXXXXXXXXXXXX--XXXXXV 528 ++NP ++ +G+ K + Q + K+ V Sbjct: 306 STFMNNPIKVS---IGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKYHSGPKKNEKV 362 Query: 529 LIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLIAT 690 LIF A R+ L+ A ++ +L Q R + F + + L+AT Sbjct: 363 LIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLAT 416
>DBP3_ASPOR (Q2UMH8) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 498 Score = 43.9 bits (102), Expect = 5e-04 Identities = 53/242 (21%), Positives = 97/242 (40%), Gaps = 13/242 (5%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSK-LKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISK 180 EL Q+Y++ LL+ S +++ V + ++ + AL ++V TP + + Sbjct: 165 ELAMQIYDQ---LLKFSGSVGVRVACVFGGVRKEEQREALK-TAGVVVATPGRLKDLQND 220 Query: 181 GIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIPRS-CQSILMSATSSPDIDKL 357 G V +K ++LDEAD +L E D+K ++ +P S Q+I+ +AT P + L Sbjct: 221 GSVDLGKVK----YLVLDEADRMLDKGFEQDIKDIIRPMPVSKRQTIMFTATWPPSVRDL 276 Query: 358 TKLLLHNPFVLTL-----------TEVGHAKDDVVPKNVQQFWISCSAKDXXXXXXXXXX 504 + +P +T+ T + + V P + + + Sbjct: 277 ASTFMSSPVTVTIGGDPSADPRANTRIKQVVEVVKPHEKESRLVQLLNR--------SQR 328 Query: 505 XXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAFNARLFDYLI 684 VL F A R+ L + A ++ +L Q R ++AF L+ Sbjct: 329 GVPEPEKVLAFCLYKKEAMRIERLLRTKGFKVAGIHGDLSQQERFRSLDAFKTGAATVLV 388 Query: 685 AT 690 AT Sbjct: 389 AT 390
>PRP28_ASPOR (Q2UH00) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 803 Score = 43.5 bits (101), Expect = 6e-04 Identities = 46/254 (18%), Positives = 93/254 (36%), Gaps = 25/254 (9%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTSKLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISKG 183 EL QQ+ EA E +V + S ++ +L I++ TP + CI + Sbjct: 456 ELAQQIEIEAKKFTE--PLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERR 513 Query: 184 IVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP--------------------- 300 ++ + +I+DEAD ++ E+ + ++ +P Sbjct: 514 ML----VLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDSEEAENSMAMSQHI 569 Query: 301 ----RSCQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSA 468 R Q+++ +AT ++++ + L P ++T+ G A D V Q+ Sbjct: 570 GTKDRYRQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVDTV----EQRVEFIAGE 625 Query: 469 KDXXXXXXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHII 648 +++FVN N + ++++ S L+ Q R + Sbjct: 626 DKRKKRLGDILSSGEFRPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAAL 685 Query: 649 EAFNARLFDYLIAT 690 + D L+AT Sbjct: 686 ASVRNGQTDVLVAT 699
>DDX1_HUMAN (Q92499) ATP-dependent RNA helicase DDX1 (EC 3.6.1.-) (DEAD box| protein 1) (DEAD box protein retinoblastoma) (DBP-RB) Length = 740 Score = 43.5 bits (101), Expect = 6e-04 Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 8/164 (4%) Frame = +1 Query: 4 ELCQQVYNEASSLLELCTS-KLKIVQVTASMSDKDIKLALSGPPNILVTTPACVAACISK 180 EL +Q N + + KL+ + + ++ +D L +I+V TP + +S Sbjct: 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVST 356 Query: 181 GIVQGSSIKESLSMMILDEADLLLSYRCEDDLKALVPHIP------RSCQSILMSAT-SS 339 G + S ++ ++LDEAD LLS D + + IP + Q I+ SAT S Sbjct: 357 GKLNLSQVR----FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHS 412 Query: 340 PDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAK 471 D+ KL++ ++H P T V +D VP V + + K Sbjct: 413 FDVKKLSEKIMHFP-----TWVDLKGEDSVPDTVHHVVVPVNPK 451
>DDX31_HUMAN (Q9H8H2) Probable ATP-dependent RNA helicase DDX31 (EC 3.6.1.-)| (DEAD box protein 31) (Helicain) Length = 851 Score = 43.5 bits (101), Expect = 6e-04 Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 4/120 (3%) Frame = +1 Query: 100 KDIKLALSGPPNILVTTPACVAACISKGIVQGSSIKES-LSMMILDEADLLLSYRCEDDL 276 K K L NIL++TP + I +I S L ++ DEAD +L E D+ Sbjct: 347 KSEKARLRKGINILISTPGRLVDHIKST----KNIHFSRLRWLVFDEADRILDLGFEKDI 402 Query: 277 KALVPHIPRSCQ---SILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQ 447 ++ + CQ ++L+SAT + + +L + LH+P +++ + H + + K VQ+ Sbjct: 403 TVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDPVSISVLDKSHDQLNPKDKAVQE 462
>SUB2_CANGA (Q6FL17) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 439 Score = 43.5 bits (101), Expect = 6e-04 Identities = 39/177 (22%), Positives = 74/177 (41%), Gaps = 1/177 (0%) Frame = +1 Query: 130 PNILVTTPACVAACISKGIVQGSSIKESLSMMILDEADLLLS-YRCEDDLKALVPHIPRS 306 P+I+V TP + A + ++ S +K ++DE D +L D++ + PR Sbjct: 178 PHIVVATPGRLKALVRDKMIDLSHVKN----FVIDECDKVLEELDMRRDVQEIFRATPRD 233 Query: 307 CQSILMSATSSPDIDKLTKLLLHNPFVLTLTEVGHAKDDVVPKNVQQFWISCSAKDXXXX 486 Q ++ SAT S +I + + L NP + + + + + +QQ++I ++ Sbjct: 234 KQVMMFSATLSQEIRPICRRFLQNPLEIFVDD----EAKLTLHGLQQYYIKLEERE-KNR 288 Query: 487 XXXXXXXXXXXXXVLIFVNSIDNAFRLRLFLEKFAIRSAVLNAELPQNSRLHIIEAF 657 V+IFV S A L L + ++ + Q R+ +AF Sbjct: 289 KLAQLLDDLEFNQVIIFVKSTSRANELTKLLNASNFPAITVHGHMKQEERIARYKAF 345 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,149,069 Number of Sequences: 219361 Number of extensions: 1691386 Number of successful extensions: 4404 Number of sequences better than 10.0: 439 Number of HSP's better than 10.0 without gapping: 4179 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4296 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6882837918 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
