ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags18p19 |
|---|---|
| Clone Library Name | barley_pub |
>ALA2_HORVU (P52894) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT)| (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) Length = 482 Score = 116 bits (291), Expect = 1e-26 Identities = 57/59 (96%), Positives = 57/59 (96%) Frame = +3 Query: 3 GKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDEXYASYKASK 179 GKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDE YASYKA K Sbjct: 306 GKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDESYASYKAEK 364
>ALA2_PANMI (P34106) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT)| (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) Length = 482 Score = 110 bits (274), Expect = 1e-24 Identities = 53/59 (89%), Positives = 54/59 (91%) Frame = +3 Query: 3 GKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDEXYASYKASK 179 GKRGGY EITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPK DE YA+YKA K Sbjct: 306 GKRGGYMEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKVGDESYAAYKAEK 364
>ALAT_YEAST (P52892) Putative alanine aminotransferase (EC 2.6.1.2)| (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 507 Score = 62.4 bits (150), Expect = 3e-10 Identities = 24/52 (46%), Positives = 38/52 (73%) Frame = +3 Query: 3 GKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDEXY 158 G+RGGY EI GFS +R+ ++K+ S+++CS +TGQ + L++ PP+ DE Y Sbjct: 334 GQRGGYMEIIGFSQEIRDALFKLMSISICSVVTGQAVVDLMVKPPQPGDESY 385
>ALAM_YEAST (P52893) Putative alanine aminotransferase, mitochondrial precursor| (EC 2.6.1.2) (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 592 Score = 62.0 bits (149), Expect = 4e-10 Identities = 27/59 (45%), Positives = 41/59 (69%) Frame = +3 Query: 3 GKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDEXYASYKASK 179 G+RGGY E+TGFS +R+ I K+AS++LC +TGQ L L++ PP +E + S +A + Sbjct: 419 GQRGGYMELTGFSHEMRQVILKLASISLCPVVTGQALVDLMVRPPVEGEESFESDQAER 477
>ALAT_SCHPO (Q10334) Putative alanine aminotransferase (EC 2.6.1.2)| (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 505 Score = 57.4 bits (137), Expect = 1e-08 Identities = 20/52 (38%), Positives = 35/52 (67%) Frame = +3 Query: 3 GKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDEXY 158 G+RGGY ++ P ++QI K+A++++C + GQ+L +++NPPK D Y Sbjct: 333 GQRGGYLDVVNIPEPAKDQILKLATIDICPPVAGQLLVDMLVNPPKPGDPSY 384
>ALAT_HUMAN (P24298) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 57.4 bits (137), Expect = 1e-08 Identities = 25/60 (41%), Positives = 38/60 (63%) Frame = +3 Query: 3 GKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDEXYASYKASKR 182 G RGGY E+ A V++Q+ K+ SV LC + GQ L LV++PP +D +A ++A K+ Sbjct: 320 GFRGGYVEVVNMDAAVQQQMLKLMSVRLCPPVPGQALLDLVVSPPAPTDPSFAQFQAEKQ 379
>ALAT_MOUSE (Q8QZR5) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 52.4 bits (124), Expect = 3e-07 Identities = 22/60 (36%), Positives = 37/60 (61%) Frame = +3 Query: 3 GKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDEXYASYKASKR 182 G RGGY E+ A V++Q+ K+ SV LC + GQ L +V++PP S+ + ++A ++ Sbjct: 320 GFRGGYVEVVNMDAEVQKQMAKLMSVRLCPPVPGQALMGMVVSPPTPSEPSFKQFQAERQ 379
>ALAT_RAT (P25409) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 52.0 bits (123), Expect = 4e-07 Identities = 22/60 (36%), Positives = 37/60 (61%) Frame = +3 Query: 3 GKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDEXYASYKASKR 182 G RGGY E+ A V++Q+ K+ SV LC + GQ L +V++PP S+ + ++A ++ Sbjct: 320 GFRGGYVEVVNMDAEVQKQMGKLMSVRLCPPVPGQALMDMVVSPPTPSEPSFKQFQAERQ 379
>P5CR_YEAST (P32263) Pyrroline-5-carboxylate reductase (EC 1.5.1.2) (P5CR) (P5C| reductase) Length = 286 Score = 29.6 bits (65), Expect = 2.3 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +3 Query: 96 ITGQILASLVMNPPKASDEXYASYKASK 179 + GQ L S + N PKA+DE A++ SK Sbjct: 12 VMGQALLSAIYNAPKAADETAAAFYPSK 39
>VGLC_MEHVF (P13374) Glycoprotein A precursor (A antigen)| Length = 373 Score = 28.1 bits (61), Expect = 6.6 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 8/64 (12%) Frame = +3 Query: 24 EITGFSAPVREQIYKIASVNLCS--------NITGQILASLVMNPPKASDEXYASYKASK 179 E T S R +KI + +C N TG+IL L+++PP SD+ ++++ Sbjct: 81 ESTSSSEAHRNSSHKIPDI-ICDREEVFVFLNNTGRILCDLIVDPP--SDDEWSNFALDV 137 Query: 180 RWNP 191 +NP Sbjct: 138 TFNP 141
>VGLC_MEHVH (P18535) Glycoprotein A precursor (A antigen)| Length = 489 Score = 28.1 bits (61), Expect = 6.6 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 8/64 (12%) Frame = +3 Query: 24 EITGFSAPVREQIYKIASVNLCS--------NITGQILASLVMNPPKASDEXYASYKASK 179 E T S R +KI + +C N TG+IL L+++PP SD+ ++++ Sbjct: 82 ESTSSSEAHRNSSHKIPDI-ICDREEVFVFLNNTGRILCDLIVDPP--SDDEWSNFALDV 138 Query: 180 RWNP 191 +NP Sbjct: 139 TFNP 142 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,535,136 Number of Sequences: 219361 Number of extensions: 335114 Number of successful extensions: 784 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 779 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 784 length of database: 80,573,946 effective HSP length: 42 effective length of database: 71,360,784 effective search space used: 1712658816 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
