| Clone Name | bags18p19 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z26322.1|HVALAAT H.vulgare mRNA for alanine aminotransferase Length = 1701 Score = 357 bits (180), Expect = 8e-96 Identities = 196/201 (97%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 1 gtggtaaaagaggtggttactttgagattactggcttcagtgctccagtaagagagcaga 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1008 gtggtaaaagaggtggttactttgagattactggcttcagtgctccagtaagagagcaga 1067 Query: 61 tctacaaaatagcatcagtgaacctatgctccaatatcactggccagatccttgctagtc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1068 tctacaaaatagcatcagtgaacctatgctccaatatcactggccagatccttgctagtc 1127 Query: 121 ttgtcatgaacccaccaaaggctagtgatgaannatacgcttcatacaaggcntcaaaaa 180 |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 1128 ttgtcatgaacccaccaaaggctagtgatgaatcatacgcttcatacaaggca-gaaaaa 1186 Query: 181 gatggaatcctcgcatcttta 201 ||||||||||||||||||||| Sbjct: 1187 gatggaatcctcgcatcttta 1207
>ref|NM_196284.1| Oryza sativa (japonica cultivar-group) putative alanine aminotransferase (OSJNBb0061I18.10), mRNA Length = 1455 Score = 180 bits (91), Expect = 1e-42 Identities = 167/192 (86%), Gaps = 1/192 (0%) Strand = Plus / Plus Query: 1 gtggtaaaagaggtggttactttgagattactggcttcagtgctccagtaagagagcaga 60 |||| |||||||| || ||| | |||||||||||||||||||||||||| |||||||||| Sbjct: 920 gtggcaaaagaggaggctacatggagattactggcttcagtgctccagttagagagcaga 979 Query: 61 tctacaaaatagcatcagtgaacctatgctccaatatcactggccagatccttgctagtc 120 |||||||| | || ||||||||| |||| |||||||||||||||||||||||||| || | Sbjct: 980 tctacaaagtggcgtcagtgaacttatgttccaatatcactggccagatccttgccagcc 1039 Query: 121 ttgtcatgaacccaccaaaggctagtgatgaannatacgcttcatacaaggcntcaaaaa 180 | |||||||| |||||||||||| | |||| | ||| |||||||||||||| | ||| Sbjct: 1040 tcgtcatgaatccaccaaaggctggagatgcatcatatgcttcatacaaggca-gagaaa 1098 Query: 181 gatggaatcctc 192 |||||||||||| Sbjct: 1099 gatggaatcctc 1110
>gb|BT016480.1| Zea mays clone Contig313 mRNA sequence Length = 768 Score = 180 bits (91), Expect = 1e-42 Identities = 164/188 (87%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 4 gtaaaagaggtggttactttgagattactggcttcagtgctccagtaagagagcagatct 63 |||||||||| || ||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 722 gtaaaagaggagggtacatggagattactggcttcagtgctccagtaagagagcagatct 663 Query: 64 acaaaatagcatcagtgaacctatgctccaatatcactggccagatccttgctagtcttg 123 |||| ||||| ||||||||||||||||||||||||||||| || |||||||| || || | Sbjct: 662 acaagatagcttcagtgaacctatgctccaatatcactggtcaaatccttgcgagcctcg 603 Query: 124 tcatgaacccaccaaaggctagtgatgaannatacgcttcatacaaggcntcaaaaagat 183 ||||||| |||||||||| | | || ||| ||| ||||| |||||||| | |||||| Sbjct: 602 tcatgaatccaccaaaggttggagacgaatcatatgcttcctacaaggcag-agaaagat 544 Query: 184 ggaatcct 191 |||||||| Sbjct: 543 ggaatcct 536
>dbj|AB007405.1| Oryza sativa mRNA for alanine aminotransferase, complete cds Length = 1821 Score = 180 bits (91), Expect = 1e-42 Identities = 167/192 (86%), Gaps = 1/192 (0%) Strand = Plus / Plus Query: 1 gtggtaaaagaggtggttactttgagattactggcttcagtgctccagtaagagagcaga 60 |||| |||||||| || ||| | |||||||||||||||||||||||||| |||||||||| Sbjct: 985 gtggcaaaagaggaggctacatggagattactggcttcagtgctccagttagagagcaga 1044 Query: 61 tctacaaaatagcatcagtgaacctatgctccaatatcactggccagatccttgctagtc 120 |||||||| | || ||||||||| |||| |||||||||||||||||||||||||| || | Sbjct: 1045 tctacaaagtggcgtcagtgaacttatgttccaatatcactggccagatccttgccagcc 1104 Query: 121 ttgtcatgaacccaccaaaggctagtgatgaannatacgcttcatacaaggcntcaaaaa 180 | |||||||| |||||||||||| | |||| | ||| |||||||||||||| | ||| Sbjct: 1105 tcgtcatgaatccaccaaaggctggagatgcatcatatgcttcatacaaggca-gagaaa 1163 Query: 181 gatggaatcctc 192 |||||||||||| Sbjct: 1164 gatggaatcctc 1175
>emb|X69421.1|PMPALAAT2 P. miliaceum mRNA for alanine aminotransferase Length = 1869 Score = 176 bits (89), Expect = 2e-41 Identities = 128/141 (90%) Strand = Plus / Plus Query: 1 gtggtaaaagaggtggttactttgagattactggcttcagtgctccagtaagagagcaga 60 ||||||||||||| || ||| | ||||||||||||||||||||||| ||||||||||||| Sbjct: 1008 gtggtaaaagaggaggctacatggagattactggcttcagtgctcccgtaagagagcaga 1067 Query: 61 tctacaaaatagcatcagtgaacctatgctccaatatcactggccagatccttgctagtc 120 ||||||| ||||| ||||||||| ||||||||||||||||||| || |||||||| || | Sbjct: 1068 tctacaagatagcttcagtgaacttatgctccaatatcactggtcaaatccttgccagcc 1127 Query: 121 ttgtcatgaacccaccaaagg 141 |||||||||| |||||||||| Sbjct: 1128 ttgtcatgaatccaccaaagg 1148
>gb|AY103725.1| Zea mays PCO103969 mRNA sequence Length = 1867 Score = 170 bits (86), Expect = 1e-39 Identities = 165/191 (86%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 1 gtggtaaaagaggtggttactttgagattactggcttcagtgctccagtaagagagcaga 60 ||||||||||||| |||||| | ||||||||||||||||||||||| ||||||||||||| Sbjct: 1140 gtggtaaaagaggaggttacatggagattactggcttcagtgctccggtaagagagcaga 1199 Query: 61 tctacaaaatagcatcagtgaacctatgctccaatatcactggccagatccttgctagtc 120 ||||||| |||| ||||||||||| ||||||||||||||||| || |||||||| || | Sbjct: 1200 tctacaaggtagcttcagtgaacctgtgctccaatatcactggtcaaatccttgcgagcc 1259 Query: 121 ttgtcatgaacccaccaaaggctagtgatgaannatacgcttcatacaaggcntcaaaaa 180 | |||||||| |||||||||| | | || ||| ||| ||||| |||||||| | ||| Sbjct: 1260 tcgtcatgaatccaccaaaggttggggacgaatcatatgcttcctacaaggcag-agaaa 1318 Query: 181 gatggaatcct 191 ||||||||||| Sbjct: 1319 gatggaatcct 1329
>gb|AF055898.1|AF055898 Zea mays alanine aminotransferase (alt) gene, complete cds Length = 6176 Score = 168 bits (85), Expect = 4e-39 Identities = 127/141 (90%) Strand = Plus / Plus Query: 1 gtggtaaaagaggtggttactttgagattactggcttcagtgctccagtaagagagcaga 60 ||||||||||||| || ||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 4810 gtggtaaaagaggagggtacatggagattactggcttcagtgctccagtaagagagcaga 4869 Query: 61 tctacaaaatagcatcagtgaacctatgctccaatatcactggccagatccttgctagtc 120 ||||||| ||||| ||||||||| | ||||||||||||||||| || |||||||| || | Sbjct: 4870 tctacaagatagcttcagtgaacttgtgctccaatatcactggtcaaatccttgcgagcc 4929 Query: 121 ttgtcatgaacccaccaaagg 141 | |||||||| |||||||||| Sbjct: 4930 tcgtcatgaatccaccaaagg 4950
>gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBb0061I18, complete sequence Length = 143163 Score = 161 bits (81), Expect = 1e-36 Identities = 126/141 (89%) Strand = Plus / Minus Query: 1 gtggtaaaagaggtggttactttgagattactggcttcagtgctccagtaagagagcaga 60 |||| |||||||| || ||| | |||||||||||||||||||||||||| |||||||||| Sbjct: 48392 gtggcaaaagaggaggctacatggagattactggcttcagtgctccagttagagagcaga 48333 Query: 61 tctacaaaatagcatcagtgaacctatgctccaatatcactggccagatccttgctagtc 120 |||||||| | || ||||||||| |||| |||||||||||||||||||||||||| || | Sbjct: 48332 tctacaaagtggcgtcagtgaacttatgttccaatatcactggccagatccttgccagcc 48273 Query: 121 ttgtcatgaacccaccaaagg 141 | |||||||| |||||||||| Sbjct: 48272 tcgtcatgaatccaccaaagg 48252 Score = 48.1 bits (24), Expect = 0.010 Identities = 48/56 (85%) Strand = Plus / Minus Query: 86 atgctccaatatcactggccagatccttgctagtcttgtcatgaacccaccaaagg 141 ||||||||| || |||||||||||||| || || ||||||||||||||||||| Sbjct: 39248 atgctccaacatatctggccagatccttatgagcctagtcatgaacccaccaaagg 39193
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 161 bits (81), Expect = 1e-36 Identities = 126/141 (89%) Strand = Plus / Plus Query: 1 gtggtaaaagaggtggttactttgagattactggcttcagtgctccagtaagagagcaga 60 |||| |||||||| || ||| | |||||||||||||||||||||||||| |||||||||| Sbjct: 12455783 gtggcaaaagaggaggctacatggagattactggcttcagtgctccagttagagagcaga 12455842 Query: 61 tctacaaaatagcatcagtgaacctatgctccaatatcactggccagatccttgctagtc 120 |||||||| | || ||||||||| |||| |||||||||||||||||||||||||| || | Sbjct: 12455843 tctacaaagtggcgtcagtgaacttatgttccaatatcactggccagatccttgccagcc 12455902 Query: 121 ttgtcatgaacccaccaaagg 141 | |||||||| |||||||||| Sbjct: 12455903 tcgtcatgaatccaccaaagg 12455923 Score = 48.1 bits (24), Expect = 0.010 Identities = 48/56 (85%) Strand = Plus / Plus Query: 86 atgctccaatatcactggccagatccttgctagtcttgtcatgaacccaccaaagg 141 ||||||||| || |||||||||||||| || || ||||||||||||||||||| Sbjct: 12464927 atgctccaacatatctggccagatccttatgagcctagtcatgaacccaccaaagg 12464982
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 161 bits (81), Expect = 1e-36 Identities = 126/141 (89%) Strand = Plus / Plus Query: 1 gtggtaaaagaggtggttactttgagattactggcttcagtgctccagtaagagagcaga 60 |||| |||||||| || ||| | |||||||||||||||||||||||||| |||||||||| Sbjct: 12463123 gtggcaaaagaggaggctacatggagattactggcttcagtgctccagttagagagcaga 12463182 Query: 61 tctacaaaatagcatcagtgaacctatgctccaatatcactggccagatccttgctagtc 120 |||||||| | || ||||||||| |||| |||||||||||||||||||||||||| || | Sbjct: 12463183 tctacaaagtggcgtcagtgaacttatgttccaatatcactggccagatccttgccagcc 12463242 Query: 121 ttgtcatgaacccaccaaagg 141 | |||||||| |||||||||| Sbjct: 12463243 tcgtcatgaatccaccaaagg 12463263 Score = 48.1 bits (24), Expect = 0.010 Identities = 48/56 (85%) Strand = Plus / Plus Query: 86 atgctccaatatcactggccagatccttgctagtcttgtcatgaacccaccaaagg 141 ||||||||| || |||||||||||||| || || ||||||||||||||||||| Sbjct: 12472267 atgctccaacatatctggccagatccttatgagcctagtcatgaacccaccaaagg 12472322
>dbj|AB007404.1| Oryza sativa gene for alanine aminotransferase, complete cds Length = 9289 Score = 161 bits (81), Expect = 1e-36 Identities = 126/141 (89%) Strand = Plus / Plus Query: 1 gtggtaaaagaggtggttactttgagattactggcttcagtgctccagtaagagagcaga 60 |||| |||||||| || ||| | |||||||||||||||||||||||||| |||||||||| Sbjct: 6064 gtggcaaaagaggaggctacatggagattactggcttcagtgctccagttagagagcaga 6123 Query: 61 tctacaaaatagcatcagtgaacctatgctccaatatcactggccagatccttgctagtc 120 |||||||| | || ||||||||| |||| |||||||||||||||||||||||||| || | Sbjct: 6124 tctacaaagtggcgtcagtgaacttatgttccaatatcactggccagatccttgccagcc 6183 Query: 121 ttgtcatgaacccaccaaagg 141 | |||||||| |||||||||| Sbjct: 6184 tcgtcatgaatccaccaaagg 6204
>dbj|AK059063.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-G05, full insert sequence Length = 833 Score = 103 bits (52), Expect = 2e-19 Identities = 86/98 (87%) Strand = Plus / Plus Query: 75 tcagtgaacctatgctccaatatcactggccagatccttgctagtcttgtcatgaaccca 134 ||||||||| |||| |||||||||||||||||||||||||| || || |||||||| ||| Sbjct: 113 tcagtgaacttatgttccaatatcactggccagatccttgccagcctcgtcatgaatcca 172 Query: 135 ccaaaggctagtgatgaannatacgcttcatacaaggc 172 ||||||||| | |||| | ||| |||||||||||||| Sbjct: 173 ccaaaggctggagatgcatcatatgcttcatacaaggc 210
>gb|AC026479.2|T13M22 Sequence of BAC T13M22 from Arabidopsis thaliana chromosome 1, complete sequence Length = 7604 Score = 65.9 bits (33), Expect = 4e-08 Identities = 114/141 (80%) Strand = Plus / Minus Query: 1 gtggtaaaagaggtggttactttgagattactggcttcagtgctccagtaagagagcaga 60 |||| ||||||||||||||| | ||| ||||||| |||| | || ||||||||||||| Sbjct: 5565 gtgggaaaagaggtggttacatggaggttactggattcacttctgatgtaagagagcaga 5506 Query: 61 tctacaaaatagcatcagtgaacctatgctccaatatcactggccagatccttgctagtc 120 | |||||||| || || ||||| || || ||||| ||| |||| || || |||||||| | Sbjct: 5505 tatacaaaatggcttctgtgaatctttgttccaacatctctggtcaaattcttgctagcc 5446 Query: 121 ttgtcatgaacccaccaaagg 141 | |||||| |||||| |||| Sbjct: 5445 tcatcatgagcccacccaagg 5425
>ref|NM_101591.4| Arabidopsis thaliana ALAAT1 (ALANINE AMINOTRANSFERAS); 1-aminocyclopropane-1-carboxylate synthase/ alanine transaminase/ transferase, transferring n> AT1G17290 (ALAAT1) mRNA, complete cds Length = 2055 Score = 63.9 bits (32), Expect = 2e-07 Identities = 110/136 (80%) Strand = Plus / Plus Query: 1 gtggtaaaagaggtggttactttgagattactggcttcagtgctccagtaagagagcaga 60 |||| ||||||||||||||| | ||| ||||||| |||| | || ||||||||||||| Sbjct: 1213 gtgggaaaagaggtggttacatggaggttactggattcacttctgatgtaagagagcaga 1272 Query: 61 tctacaaaatagcatcagtgaacctatgctccaatatcactggccagatccttgctagtc 120 | |||||||| || || ||||| || || ||||| ||| |||| || || |||||||| | Sbjct: 1273 tatacaaaatggcttctgtgaatctttgttccaacatctctggtcaaattcttgctagcc 1332 Query: 121 ttgtcatgaacccacc 136 | |||||| |||||| Sbjct: 1333 tcatcatgagcccacc 1348
>gb|BT014732.1| Arabidopsis thaliana At1g17290.1 mRNA sequence Length = 1629 Score = 63.9 bits (32), Expect = 2e-07 Identities = 110/136 (80%) Strand = Plus / Plus Query: 1 gtggtaaaagaggtggttactttgagattactggcttcagtgctccagtaagagagcaga 60 |||| ||||||||||||||| | ||| ||||||| |||| | || ||||||||||||| Sbjct: 1094 gtgggaaaagaggtggttacatggaggttactggattcacttctgatgtaagagagcaga 1153 Query: 61 tctacaaaatagcatcagtgaacctatgctccaatatcactggccagatccttgctagtc 120 | |||||||| || || ||||| || || ||||| ||| |||| || || |||||||| | Sbjct: 1154 tatacaaaatggcttctgtgaatctttgttccaacatctctggtcaaattcttgctagcc 1213 Query: 121 ttgtcatgaacccacc 136 | |||||| |||||| Sbjct: 1214 tcatcatgagcccacc 1229
>gb|AY039970.1| Arabidopsis thaliana putative alanine aminotransferase (At1g17290) mRNA, partial cds Length = 1929 Score = 63.9 bits (32), Expect = 2e-07 Identities = 110/136 (80%) Strand = Plus / Plus Query: 1 gtggtaaaagaggtggttactttgagattactggcttcagtgctccagtaagagagcaga 60 |||| ||||||||||||||| | ||| ||||||| |||| | || ||||||||||||| Sbjct: 1093 gtgggaaaagaggtggttacatggaggttactggattcacttctgatgtaagagagcaga 1152 Query: 61 tctacaaaatagcatcagtgaacctatgctccaatatcactggccagatccttgctagtc 120 | |||||||| || || ||||| || || ||||| ||| |||| || || |||||||| | Sbjct: 1153 tatacaaaatggcttctgtgaatctttgttccaacatctctggtcaaattcttgctagcc 1212 Query: 121 ttgtcatgaacccacc 136 | |||||| |||||| Sbjct: 1213 tcatcatgagcccacc 1228
>emb|BX818614.1|CNS0AE5B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL88ZC08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 883 Score = 63.9 bits (32), Expect = 2e-07 Identities = 110/136 (80%) Strand = Plus / Plus Query: 1 gtggtaaaagaggtggttactttgagattactggcttcagtgctccagtaagagagcaga 60 |||| ||||||||||||||| | ||| ||||||| |||| | || ||||||||||||| Sbjct: 61 gtgggaaaagaggtggttacatggaggttactggattcacttctgatgtaagagagcaga 120 Query: 61 tctacaaaatagcatcagtgaacctatgctccaatatcactggccagatccttgctagtc 120 | |||||||| || || ||||| || || ||||| ||| |||| || || |||||||| | Sbjct: 121 tatacaaaatggcttctgtgaatctttgttccaacatctctggtcaaattcttgctagcc 180 Query: 121 ttgtcatgaacccacc 136 | |||||| |||||| Sbjct: 181 tcatcatgagcccacc 196
>gb|AF275372.1|AF275372 Arabidopsis thaliana alanine aminotransferase (ALAAT1) mRNA, complete cds Length = 2024 Score = 63.9 bits (32), Expect = 2e-07 Identities = 110/136 (80%) Strand = Plus / Plus Query: 1 gtggtaaaagaggtggttactttgagattactggcttcagtgctccagtaagagagcaga 60 |||| ||||||||||||||| | ||| ||||||| |||| | || ||||||||||||| Sbjct: 1213 gtgggaaaagaggtggttacatggaggttactggattcacttctgatgtaagagagcaga 1272 Query: 61 tctacaaaatagcatcagtgaacctatgctccaatatcactggccagatccttgctagtc 120 | |||||||| || || ||||| || || ||||| ||| |||| || || |||||||| | Sbjct: 1273 tatacaaaatggcttctgtgaatctttgttccaacatctctggtcaaattcttgctagcc 1332 Query: 121 ttgtcatgaacccacc 136 | |||||| |||||| Sbjct: 1333 tcatcatgagcccacc 1348
>ref|XM_470564.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1527 Score = 61.9 bits (31), Expect = 7e-07 Identities = 88/107 (82%) Strand = Plus / Plus Query: 9 agaggtggttactttgagattactggcttcagtgctccagtaagagagcagatctacaaa 68 ||||| |||||| | ||| | ||||||||||| ||||||| ||||| || |||||||| Sbjct: 958 agaggcggttacatggaggtcactggcttcagcactccagttagagaacaactctacaaa 1017 Query: 69 atagcatcagtgaacctatgctccaatatcactggccagatccttgc 115 || ||||| || ||| | || || |||||||| |||||||||||||| Sbjct: 1018 attgcatctgttaacttgtgttcaaatatcaccggccagatccttgc 1064
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 61.9 bits (31), Expect = 7e-07 Identities = 88/107 (82%) Strand = Plus / Minus Query: 9 agaggtggttactttgagattactggcttcagtgctccagtaagagagcagatctacaaa 68 ||||| |||||| | ||| | ||||||||||| ||||||| ||||| || |||||||| Sbjct: 4367256 agaggcggttacatggaggtcactggcttcagcactccagttagagaacaactctacaaa 4367197 Query: 69 atagcatcagtgaacctatgctccaatatcactggccagatccttgc 115 || ||||| || ||| | || || |||||||| |||||||||||||| Sbjct: 4367196 attgcatctgttaacttgtgttcaaatatcaccggccagatccttgc 4367150
>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G08, from Chromosome 3, complete sequence Length = 122052 Score = 61.9 bits (31), Expect = 7e-07 Identities = 88/107 (82%) Strand = Plus / Plus Query: 9 agaggtggttactttgagattactggcttcagtgctccagtaagagagcagatctacaaa 68 ||||| |||||| | ||| | ||||||||||| ||||||| ||||| || |||||||| Sbjct: 59241 agaggcggttacatggaggtcactggcttcagcactccagttagagaacaactctacaaa 59300 Query: 69 atagcatcagtgaacctatgctccaatatcactggccagatccttgc 115 || ||||| || ||| | || || |||||||| |||||||||||||| Sbjct: 59301 attgcatctgttaacttgtgttcaaatatcaccggccagatccttgc 59347
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 61.9 bits (31), Expect = 7e-07 Identities = 88/107 (82%) Strand = Plus / Minus Query: 9 agaggtggttactttgagattactggcttcagtgctccagtaagagagcagatctacaaa 68 ||||| |||||| | ||| | ||||||||||| ||||||| ||||| || |||||||| Sbjct: 4367371 agaggcggttacatggaggtcactggcttcagcactccagttagagaacaactctacaaa 4367312 Query: 69 atagcatcagtgaacctatgctccaatatcactggccagatccttgc 115 || ||||| || ||| | || || |||||||| |||||||||||||| Sbjct: 4367311 attgcatctgttaacttgtgttcaaatatcaccggccagatccttgc 4367265
>gb|BT017492.1| Zea mays clone EL01N0413D07.c mRNA sequence Length = 1040 Score = 58.0 bits (29), Expect = 1e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 72 gcatcagtgaacctatgctccaatatcactggccagatccttgctagtcttgtcatgaac 131 |||||||| ||||| ||||||||| | | || || || |||||||| ||||| |||||| Sbjct: 261 gcatcagtaaacctgtgctccaatgtttcggggcaaattcttgctagccttgtaatgaac 320 Query: 132 ccaccaaaggctagtgatgaa 152 |||||||||||| | |||||| Sbjct: 321 ccaccaaaggctggggatgaa 341
>gb|AY107464.1| Zea mays PCO113489 mRNA sequence Length = 980 Score = 58.0 bits (29), Expect = 1e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 72 gcatcagtgaacctatgctccaatatcactggccagatccttgctagtcttgtcatgaac 131 |||||||| ||||| ||||||||| | | || || || |||||||| ||||| |||||| Sbjct: 135 gcatcagtaaacctgtgctccaatgtttcggggcaaattcttgctagccttgtaatgaac 194 Query: 132 ccaccaaaggctagtgatgaa 152 |||||||||||| | |||||| Sbjct: 195 ccaccaaaggctggggatgaa 215
>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence Length = 405672 Score = 52.0 bits (26), Expect = 7e-04 Identities = 59/70 (84%) Strand = Plus / Minus Query: 72 gcatcagtgaacctatgctccaatatcactggccagatccttgctagtcttgtcatgaac 131 |||||||| ||||| ||||||||| | | || || || |||||||| ||||| |||||| Sbjct: 99961 gcatcagtaaacctgtgctccaatgtttcggggcaaattcttgctagccttgtaatgaac 99902 Query: 132 ccaccaaagg 141 |||||||||| Sbjct: 99901 ccaccaaagg 99892
>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence Length = 323584 Score = 52.0 bits (26), Expect = 7e-04 Identities = 59/70 (84%) Strand = Plus / Minus Query: 72 gcatcagtgaacctatgctccaatatcactggccagatccttgctagtcttgtcatgaac 131 |||||||| ||||| ||||||||| | | || || || |||||||| ||||| |||||| Sbjct: 88997 gcatcagtaaacctgtgctccaatgtttcggggcaaattcttgctagccttgtaatgaac 88938 Query: 132 ccaccaaagg 141 |||||||||| Sbjct: 88937 ccaccaaagg 88928
>ref|NM_196285.1| Oryza sativa (japonica cultivar-group) putative alanine aminotransferase 2 (OSJNBb0061I18.9), mRNA Length = 1440 Score = 48.1 bits (24), Expect = 0.010 Identities = 48/56 (85%) Strand = Plus / Plus Query: 86 atgctccaatatcactggccagatccttgctagtcttgtcatgaacccaccaaagg 141 ||||||||| || |||||||||||||| || || ||||||||||||||||||| Sbjct: 990 atgctccaacatatctggccagatccttatgagcctagtcatgaacccaccaaagg 1045
>dbj|AK119373.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-A03, full insert sequence Length = 2959 Score = 48.1 bits (24), Expect = 0.010 Identities = 48/56 (85%) Strand = Plus / Plus Query: 86 atgctccaatatcactggccagatccttgctagtcttgtcatgaacccaccaaagg 141 ||||||||| || |||||||||||||| || || ||||||||||||||||||| Sbjct: 1261 atgctccaacatatctggccagatccttatgagcctagtcatgaacccaccaaagg 1316
>dbj|AK107029.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-A10, full insert sequence Length = 1696 Score = 48.1 bits (24), Expect = 0.010 Identities = 48/56 (85%) Strand = Plus / Plus Query: 86 atgctccaatatcactggccagatccttgctagtcttgtcatgaacccaccaaagg 141 ||||||||| || |||||||||||||| || || ||||||||||||||||||| Sbjct: 1154 atgctccaacatatctggccagatccttatgagcctagtcatgaacccaccaaagg 1209
>gb|AC116953.5| Mus musculus BAC clone RP23-119H17 from chromosome 7, complete sequence Length = 193506 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aaatagcatcagtgaaccta 86 |||||||||||||||||||| Sbjct: 81475 aaatagcatcagtgaaccta 81494
>emb|AL117380.28|HSJ749H19 Human DNA sequence from clone RP4-749H19 on chromosome 20q13.11-13.33 Contains ESTs, STSs, GSSs and a CpG island, complete sequence Length = 178473 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 tgtcatgaacccaccaaagg 141 |||||||||||||||||||| Sbjct: 177833 tgtcatgaacccaccaaagg 177852
>dbj|AK029416.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833432D21 product:unclassifiable, full insert sequence Length = 2365 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 gagagcagatctacaaaatagcat 75 ||||| |||||||||||||||||| Sbjct: 339 gagagaagatctacaaaatagcat 316
>gb|AC074224.3|AC074224 Mus musculus strain C57BL6/J chromosome 2 clone RP23-43C3, complete sequence Length = 188989 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 gagagcagatctacaaaatagcat 75 ||||| |||||||||||||||||| Sbjct: 69970 gagagaagatctacaaaatagcat 69947
>emb|Z68010.1|CET01C1 Caenorhabditis elegans Cosmid T01C1, complete sequence Length = 27602 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 aagagagcagatctacaaaa 69 |||||||||||||||||||| Sbjct: 7714 aagagagcagatctacaaaa 7733
>emb|AL845368.6| Mouse DNA sequence from clone RP23-206D14 on chromosome 2, complete sequence Length = 159056 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 gagagcagatctacaaaatagcat 75 ||||| |||||||||||||||||| Sbjct: 9693 gagagaagatctacaaaatagcat 9716 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,363,539 Number of Sequences: 3902068 Number of extensions: 1363539 Number of successful extensions: 85155 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 35 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85009 Number of HSP's gapped (non-prelim): 137 length of query: 201 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 179 effective length of database: 17,147,199,772 effective search space: 3069348759188 effective search space used: 3069348759188 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)