ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags18p18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK067402.1| Oryza sativa (japonica cultivar-group) cDNA clon... 841 0.0
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 252 1e-63
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 252 1e-63
4gb|BT017690.1| Zea mays clone EL01N0444C08.c mRNA sequence 178 2e-41
5gb|AC150705.16| Medicago truncatula clone mth2-132b13, complete ... 64 7e-07
6gb|BC041815.1| Homo sapiens cDNA clone IMAGE:5266959 44 0.62
7gb|AC080128.21| Homo sapiens 3 BAC RP11-404G16 (Roswell Park Can... 44 0.62
8dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 44 0.62
9emb|AL115108.1|CNS01C5O Botrytis cinerea strain T4 cDNA library 44 0.62
10emb|AL112722.1|CNS01ABE Botrytis cinerea strain T4 cDNA library 44 0.62
11emb|AL110852.1|CNS018VH Botrytis cinerea strain T4 cDNA library 44 0.62
12ref|XM_805165.1| Trypanosoma cruzi strain CL Brener dispersed ge... 42 2.5
13ref|XM_806824.1| Trypanosoma cruzi strain CL Brener dispersed ge... 42 2.5
14gb|AC012101.7| Homo sapiens chromosome 18, clone RP11-396D4, com... 42 2.5
15gb|AC090812.5| Homo sapiens chromosome 18, clone RP11-59J7, comp... 42 2.5
16gb|AC022723.9| Homo sapiens chromosome 18, clone RP11-237L16, co... 42 2.5
17emb|BX510366.5| Zebrafish DNA sequence from clone DKEY-189P24 in... 42 2.5
18gb|AC164641.5| Mus musculus BAC clone RP23-393F10 from chromosom... 40 9.7
19gb|AC016522.10| Mus musculus chromosome 7, clone RP23-352D23, co... 40 9.7
20emb|CR555308.1| Azoarcus sp. EbN1 plasmid 2 40 9.7
21emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosome 4, ... 40 9.7
22emb|AL078468.1|ATT32A16 Arabidopsis thaliana DNA chromosome 4, B... 40 9.7
23gb|AC109349.3| Homo sapiens BAC clone RP11-100L2 from 4, complet... 40 9.7
24gb|AY078082.1| Homo sapiens Jun activation domain binding protei... 40 9.7
25dbj|AB044970.1| Arabidopsis thaliana NDK4 gene for nucleoside di... 40 9.7
26emb|X86780.1|SHGCPIR S.hygroscopicus gene cluster for polyketide... 40 9.7
27gb|AC137126.13| Mus musculus chromosome 15, clone RP24-250I9, co... 40 9.7
28gb|AC165956.4| Mus musculus BAC clone RP23-437I5 from chromosome... 40 9.7

>dbj|AK067402.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106G16, full
           insert sequence
          Length = 2238

 Score =  841 bits (424), Expect = 0.0
 Identities = 631/700 (90%)
 Strand = Plus / Plus

                                                                       
Query: 9   gtggcggtggagaactacgccgcctttatagccgcctcagaggcgctctccttcgtgcgg 68
           |||||||||||||||||||  ||||| || ||||| || ||||||||||||||||| || 
Sbjct: 258 gtggcggtggagaactacggggccttcatcgccgcatccgaggcgctctccttcgtccgc 317

                                                                       
Query: 69  gcacagctcgaggggttcgacaagcacctcgaggcactggtagaggagatacccaattta 128
           || ||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||
Sbjct: 318 gcgcagctcgaggggttcgacaggcacctcgaggcactgatagaggagataccgaattta 377

                                                                       
Query: 129 acatctggttgcaccgagtttgttgagtccgcacatcaaattttggaagagaggaagctc 188
           |||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||||||
Sbjct: 378 acatctggctgcaccgagtttgttgagtcagcacagcaaattttagaagagaggaagctc 437

                                                                       
Query: 189 aatcagacattactagccaaccacagtaccttgctagacctgcttgaaatcccacaactt 248
           |||||||||||||||||||| ||||| ||  |||| || |||||||||||||||||||| 
Sbjct: 438 aatcagacattactagccaatcacagcacactgcttgatctgcttgaaatcccacaactg 497

                                                                       
Query: 249 atggacacatgcatacggaatgggaactatgatgaggcactcgatctagaagcttttgtt 308
           ||||||||||| ||||| ||||||||||||||||||||||| || || ||||| ||||||
Sbjct: 498 atggacacatgtatacgaaatgggaactatgatgaggcacttgacctggaagcctttgtt 557

                                                                       
Query: 309 agtaaaatttcgaaattgcaccctgatttacctgtcatccaaggattagctgctgaagtc 368
           |||||||| || || |||||||||||||||||||| |||||||| ||||||| |||||||
Sbjct: 558 agtaaaatatcaaagttgcaccctgatttacctgttatccaaggcttagctgttgaagtc 617

                                                                       
Query: 369 aagaagacgatacaatcactaatttcgcagctactccaaaagcttcgatcaaatattcag 428
           |||||||| ||||| ||| ||||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 618 aagaagacaatacagtcattaatttctcagcttctccagaagcttcgatcaaatattcag 677

                                                                       
Query: 429 ttacccgaatgcctccgtattgtcgcacatttgcgccggattggagtgttcagtgaatca 488
           || || ||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 678 ttgcctgaatgcctccgtattgttgcacatttgcgccgcattggagtgttcagtgaatca 737

                                                                       
Query: 489 gaattacgcctccagttcctgagatgcagggaagcttggctttctgggattcttgatgat 548
           ||||| ||  | |||||| |||||||||||||||||||||||||||||||||||||||| 
Sbjct: 738 gaattgcgtttacagttcttgagatgcagggaagcttggctttctgggattcttgatgac 797

                                                                       
Query: 549 ctagaccaaaggaatgtatatgattatctgaaaggcatggtgacttgccacaggacacat 608
           || |||||||||||||||||||  ||||| | ||||||||||  || |||||| ||||||
Sbjct: 798 ctggaccaaaggaatgtatatgggtatctaacaggcatggtgggttaccacagaacacat 857

                                                                       
Query: 609 ctatttgatgttgtcaatcaatatcgggcgatattcaacaatgataaatccggaagtgaa 668
           |||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||| 
Sbjct: 858 ctatttgatgttgtcaatcaatatcgagcaatattcaacaatgataagtccggaagtgat 917

                                                   
Query: 669 gagaacagtgatggtgggctgcttttcagctgggcaatgc 708
           ||||||   ||||||||  |||||||||||||||||||||
Sbjct: 918 gagaactacgatggtggattgcttttcagctgggcaatgc 957



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  252 bits (127), Expect = 1e-63
 Identities = 187/207 (90%)
 Strand = Plus / Plus

                                                                            
Query: 502      agttcctgagatgcagggaagcttggctttctgggattcttgatgatctagaccaaagga 561
                ||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 21479339 agttcttgagatgcagggaagcttggctttctgggattcttgatgacctggaccaaagga 21479398

                                                                            
Query: 562      atgtatatgattatctgaaaggcatggtgacttgccacaggacacatctatttgatgttg 621
                |||||||||  ||||| | ||||||||||  || |||||| |||||||||||||||||||
Sbjct: 21479399 atgtatatgggtatctaacaggcatggtgggttaccacagaacacatctatttgatgttg 21479458

                                                                            
Query: 622      tcaatcaatatcgggcgatattcaacaatgataaatccggaagtgaagagaacagtgatg 681
                ||||||||||||| || ||||||||||||||||| ||||||||||| ||||||   ||||
Sbjct: 21479459 tcaatcaatatcgagcaatattcaacaatgataagtccggaagtgatgagaactacgatg 21479518

                                           
Query: 682      gtgggctgcttttcagctgggcaatgc 708
                ||||  |||||||||||||||||||||
Sbjct: 21479519 gtggattgcttttcagctgggcaatgc 21479545



 Score =  198 bits (100), Expect = 2e-47
 Identities = 136/148 (91%)
 Strand = Plus / Plus

                                                                            
Query: 109      tagaggagatacccaatttaacatctggttgcaccgagtttgttgagtccgcacatcaaa 168
                ||||||||||||| |||||||||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 21478102 tagaggagataccgaatttaacatctggctgcaccgagtttgttgagtcagcacagcaaa 21478161

                                                                            
Query: 169      ttttggaagagaggaagctcaatcagacattactagccaaccacagtaccttgctagacc 228
                |||| ||||||||||||||||||||||||||||||||||| ||||| ||  |||| || |
Sbjct: 21478162 ttttagaagagaggaagctcaatcagacattactagccaatcacagcacactgcttgatc 21478221

                                            
Query: 229      tgcttgaaatcccacaacttatggacac 256
                ||||||||||||||||||| ||||||||
Sbjct: 21478222 tgcttgaaatcccacaactgatggacac 21478249



 Score =  123 bits (62), Expect = 8e-25
 Identities = 92/102 (90%)
 Strand = Plus / Plus

                                                                            
Query: 9        gtggcggtggagaactacgccgcctttatagccgcctcagaggcgctctccttcgtgcgg 68
                |||||||||||||||||||  ||||| || ||||| || ||||||||||||||||| || 
Sbjct: 21475440 gtggcggtggagaactacggggccttcatcgccgcatccgaggcgctctccttcgtccgc 21475499

                                                          
Query: 69       gcacagctcgaggggttcgacaagcacctcgaggcactggta 110
                || ||||||||||||||||||| |||||||||||||||||||
Sbjct: 21475500 gcgcagctcgaggggttcgacaggcacctcgaggcactggta 21475541



 Score =  115 bits (58), Expect = 2e-22
 Identities = 85/94 (90%)
 Strand = Plus / Plus

                                                                            
Query: 335      tttacctgtcatccaaggattagctgctgaagtcaagaagacgatacaatcactaatttc 394
                ||||||||| |||||||| ||||||| ||||||||||||||| ||||| ||| |||||||
Sbjct: 21478604 tttacctgttatccaaggcttagctgttgaagtcaagaagacaatacagtcattaatttc 21478663

                                                  
Query: 395      gcagctactccaaaagcttcgatcaaatattcag 428
                 ||||| ||||| |||||||||||||||||||||
Sbjct: 21478664 tcagcttctccagaagcttcgatcaaatattcag 21478697



 Score =  103 bits (52), Expect = 8e-19
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                            
Query: 426      cagttacccgaatgcctccgtattgtcgcacatttgcgccggattggagtgttcagtgaa 485
                ||||| || ||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 21478917 cagttgcctgaatgcctccgtattgttgcacatttgcgccgcattggagtgttcagtgaa 21478976

                        
Query: 486      tcagaatt 493
                ||||||||
Sbjct: 21478977 tcagaatt 21478984



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                            
Query: 261      atacggaatgggaactatgatgaggcactcgatctagaagcttttgttagtaaaatttcg 320
                ||||| ||||||||||||||||||||||| || || ||||| |||||||||||||| || 
Sbjct: 21478453 atacgaaatgggaactatgatgaggcacttgacctggaagcctttgttagtaaaatatca 21478512

                              
Query: 321      aaattgcaccctga 334
                || |||||||||||
Sbjct: 21478513 aagttgcaccctga 21478526



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  252 bits (127), Expect = 1e-63
 Identities = 187/207 (90%)
 Strand = Plus / Plus

                                                                            
Query: 502      agttcctgagatgcagggaagcttggctttctgggattcttgatgatctagaccaaagga 561
                ||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 21407660 agttcttgagatgcagggaagcttggctttctgggattcttgatgacctggaccaaagga 21407719

                                                                            
Query: 562      atgtatatgattatctgaaaggcatggtgacttgccacaggacacatctatttgatgttg 621
                |||||||||  ||||| | ||||||||||  || |||||| |||||||||||||||||||
Sbjct: 21407720 atgtatatgggtatctaacaggcatggtgggttaccacagaacacatctatttgatgttg 21407779

                                                                            
Query: 622      tcaatcaatatcgggcgatattcaacaatgataaatccggaagtgaagagaacagtgatg 681
                ||||||||||||| || ||||||||||||||||| ||||||||||| ||||||   ||||
Sbjct: 21407780 tcaatcaatatcgagcaatattcaacaatgataagtccggaagtgatgagaactacgatg 21407839

                                           
Query: 682      gtgggctgcttttcagctgggcaatgc 708
                ||||  |||||||||||||||||||||
Sbjct: 21407840 gtggattgcttttcagctgggcaatgc 21407866



 Score =  198 bits (100), Expect = 2e-47
 Identities = 136/148 (91%)
 Strand = Plus / Plus

                                                                            
Query: 109      tagaggagatacccaatttaacatctggttgcaccgagtttgttgagtccgcacatcaaa 168
                ||||||||||||| |||||||||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 21406423 tagaggagataccgaatttaacatctggctgcaccgagtttgttgagtcagcacagcaaa 21406482

                                                                            
Query: 169      ttttggaagagaggaagctcaatcagacattactagccaaccacagtaccttgctagacc 228
                |||| ||||||||||||||||||||||||||||||||||| ||||| ||  |||| || |
Sbjct: 21406483 ttttagaagagaggaagctcaatcagacattactagccaatcacagcacactgcttgatc 21406542

                                            
Query: 229      tgcttgaaatcccacaacttatggacac 256
                ||||||||||||||||||| ||||||||
Sbjct: 21406543 tgcttgaaatcccacaactgatggacac 21406570



 Score =  123 bits (62), Expect = 8e-25
 Identities = 92/102 (90%)
 Strand = Plus / Plus

                                                                            
Query: 9        gtggcggtggagaactacgccgcctttatagccgcctcagaggcgctctccttcgtgcgg 68
                |||||||||||||||||||  ||||| || ||||| || ||||||||||||||||| || 
Sbjct: 21403761 gtggcggtggagaactacggggccttcatcgccgcatccgaggcgctctccttcgtccgc 21403820

                                                          
Query: 69       gcacagctcgaggggttcgacaagcacctcgaggcactggta 110
                || ||||||||||||||||||| |||||||||||||||||||
Sbjct: 21403821 gcgcagctcgaggggttcgacaggcacctcgaggcactggta 21403862



 Score =  115 bits (58), Expect = 2e-22
 Identities = 85/94 (90%)
 Strand = Plus / Plus

                                                                            
Query: 335      tttacctgtcatccaaggattagctgctgaagtcaagaagacgatacaatcactaatttc 394
                ||||||||| |||||||| ||||||| ||||||||||||||| ||||| ||| |||||||
Sbjct: 21406925 tttacctgttatccaaggcttagctgttgaagtcaagaagacaatacagtcattaatttc 21406984

                                                  
Query: 395      gcagctactccaaaagcttcgatcaaatattcag 428
                 ||||| ||||| |||||||||||||||||||||
Sbjct: 21406985 tcagcttctccagaagcttcgatcaaatattcag 21407018



 Score =  103 bits (52), Expect = 8e-19
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                            
Query: 426      cagttacccgaatgcctccgtattgtcgcacatttgcgccggattggagtgttcagtgaa 485
                ||||| || ||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 21407238 cagttgcctgaatgcctccgtattgttgcacatttgcgccgcattggagtgttcagtgaa 21407297

                        
Query: 486      tcagaatt 493
                ||||||||
Sbjct: 21407298 tcagaatt 21407305



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                            
Query: 261      atacggaatgggaactatgatgaggcactcgatctagaagcttttgttagtaaaatttcg 320
                ||||| ||||||||||||||||||||||| || || ||||| |||||||||||||| || 
Sbjct: 21406774 atacgaaatgggaactatgatgaggcacttgacctggaagcctttgttagtaaaatatca 21406833

                              
Query: 321      aaattgcaccctga 334
                || |||||||||||
Sbjct: 21406834 aagttgcaccctga 21406847



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>gb|BT017690.1| Zea mays clone EL01N0444C08.c mRNA sequence
          Length = 1330

 Score =  178 bits (90), Expect = 2e-41
 Identities = 129/142 (90%)
 Strand = Plus / Plus

                                                                       
Query: 567 tatgattatctgaaaggcatggtgacttgccacaggacacatctatttgatgttgtcaat 626
           |||||||| |||||||||||||||||||||||||||  |||||||||||||||||| |||
Sbjct: 12  tatgattacctgaaaggcatggtgacttgccacagggtacatctatttgatgttgttaat 71

                                                                       
Query: 627 caatatcgggcgatattcaacaatgataaatccggaagtgaagagaacagtgatggtggg 686
           |||||||| || |||||||||||||||||||| |||| ||| ||||||  ||| || |||
Sbjct: 72  caatatcgagcaatattcaacaatgataaatctggaaatgatgagaactatgacggcggg 131

                                 
Query: 687 ctgcttttcagctgggcaatgc 708
           ||||||||||||||||||||||
Sbjct: 132 ctgcttttcagctgggcaatgc 153



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>gb|AC150705.16| Medicago truncatula clone mth2-132b13, complete sequence
          Length = 121342

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 77/92 (83%)
 Strand = Plus / Minus

                                                                         
Query: 165   caaattttggaagagaggaagctcaatcagacattactagccaaccacagtaccttgcta 224
             |||||||||||  |||||||| | || || ||| | |||||||| |||||||| ||||| 
Sbjct: 52908 caaattttggagaagaggaagatgaaccaaacaatgctagccaatcacagtactttgctt 52849

                                             
Query: 225   gacctgcttgaaatcccacaacttatggacac 256
             ||| |||| ||||| || ||||||||||||||
Sbjct: 52848 gacttgctagaaattcctcaacttatggacac 52817



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 83/103 (80%)
 Strand = Plus / Minus

                                                                         
Query: 606   catctatttgatgttgtcaatcaatatcgggcgatattcaacaatgataaatccggaagt 665
             ||||| |||||||| || ||||||||||| || |||||     |||| | ||| ||||||
Sbjct: 51960 catctttttgatgtcgtgaatcaatatcgagcaatatttgctgatgacacatcgggaagt 51901

                                                        
Query: 666   gaagagaacagtgatggtgggctgcttttcagctgggcaatgc 708
             || || |||  ||||||||| || ||||| |||||||||||||
Sbjct: 51900 gaggaaaactatgatggtggactactttttagctgggcaatgc 51858



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>gb|BC041815.1| Homo sapiens cDNA clone IMAGE:5266959
          Length = 3378

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 298  aagcttttgttagtaaaatttc 319
            ||||||||||||||||||||||
Sbjct: 2523 aagcttttgttagtaaaatttc 2544



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>gb|AC080128.21| Homo sapiens 3 BAC RP11-404G16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 181241

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 298    aagcttttgttagtaaaatttc 319
              ||||||||||||||||||||||
Sbjct: 144848 aagcttttgttagtaaaatttc 144827



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>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012
          Length = 2668010

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 559    ggaatgtatatgattatctgaa 580
              ||||||||||||||||||||||
Sbjct: 782907 ggaatgtatatgattatctgaa 782886



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>emb|AL115108.1|CNS01C5O Botrytis cinerea strain T4 cDNA library
          Length = 480

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 625 atcaatatcgggcgatattcaa 646
           ||||||||||||||||||||||
Sbjct: 2   atcaatatcgggcgatattcaa 23



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>emb|AL112722.1|CNS01ABE Botrytis cinerea strain T4 cDNA library
          Length = 636

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 625 atcaatatcgggcgatattcaa 646
           ||||||||||||||||||||||
Sbjct: 6   atcaatatcgggcgatattcaa 27



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>emb|AL110852.1|CNS018VH Botrytis cinerea strain T4 cDNA library
          Length = 480

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 625 atcaatatcgggcgatattcaa 646
           ||||||||||||||||||||||
Sbjct: 5   atcaatatcgggcgatattcaa 26



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>ref|XM_805165.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053507477.10) partial mRNA
          Length = 10425

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 509  gagatgcagggaagcttggct 529
            |||||||||||||||||||||
Sbjct: 5668 gagatgcagggaagcttggct 5688



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>ref|XM_806824.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053510005.50) partial mRNA
          Length = 6275

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 509  gagatgcagggaagcttggct 529
            |||||||||||||||||||||
Sbjct: 1527 gagatgcagggaagcttggct 1547



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>gb|AC012101.7| Homo sapiens chromosome 18, clone RP11-396D4, complete sequence
          Length = 168965

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 525    tggctttctgggattcttgat 545
              |||||||||||||||||||||
Sbjct: 144952 tggctttctgggattcttgat 144972



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>gb|AC090812.5| Homo sapiens chromosome 18, clone RP11-59J7, complete sequence
          Length = 176873

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 525    tggctttctgggattcttgat 545
              |||||||||||||||||||||
Sbjct: 149842 tggctttctgggattcttgat 149822



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>gb|AC022723.9| Homo sapiens chromosome 18, clone RP11-237L16, complete sequence
          Length = 121014

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 525   tggctttctgggattcttgat 545
             |||||||||||||||||||||
Sbjct: 38019 tggctttctgggattcttgat 38039



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>emb|BX510366.5| Zebrafish DNA sequence from clone DKEY-189P24 in linkage group 5,
             complete sequence
          Length = 179350

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 188   caatcagacattactagccaa 208
             |||||||||||||||||||||
Sbjct: 86545 caatcagacattactagccaa 86565



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>gb|AC164641.5| Mus musculus BAC clone RP23-393F10 from chromosome 12, complete
             sequence
          Length = 198725

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 589   tgacttgccacaggacacat 608
             ||||||||||||||||||||
Sbjct: 65426 tgacttgccacaggacacat 65445



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>gb|AC016522.10| Mus musculus chromosome 7, clone RP23-352D23, complete sequence
          Length = 191935

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 600   aggacacatctatttgatgt 619
             ||||||||||||||||||||
Sbjct: 67465 aggacacatctatttgatgt 67484



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>emb|CR555308.1| Azoarcus sp. EbN1 plasmid 2
          Length = 223670

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 344   catccaaggattagctgctg 363
             ||||||||||||||||||||
Sbjct: 47207 catccaaggattagctgctg 47226



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>emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 60
          Length = 196677

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   aaaagcttcgatcaaatatt 425
             ||||||||||||||||||||
Sbjct: 84162 aaaagcttcgatcaaatatt 84143



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>emb|AL078468.1|ATT32A16 Arabidopsis thaliana DNA chromosome 4, BAC clone T32A16 (ESSA project)
          Length = 89826

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   aaaagcttcgatcaaatatt 425
             ||||||||||||||||||||
Sbjct: 34256 aaaagcttcgatcaaatatt 34237



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>gb|AC109349.3| Homo sapiens BAC clone RP11-100L2 from 4, complete sequence
          Length = 44331

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 525   tggctttctgggattcttga 544
             ||||||||||||||||||||
Sbjct: 32142 tggctttctgggattcttga 32161



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>gb|AY078082.1| Homo sapiens Jun activation domain binding protein mRNA, complete
           cds
          Length = 940

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 520 aagcttggctttctgggatt 539
           ||||||||||||||||||||
Sbjct: 1   aagcttggctttctgggatt 20



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>dbj|AB044970.1| Arabidopsis thaliana NDK4 gene for nucleoside diphosphate kinase 4,
           complete cds
          Length = 2168

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 406 aaaagcttcgatcaaatatt 425
           ||||||||||||||||||||
Sbjct: 561 aaaagcttcgatcaaatatt 542



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>emb|X86780.1|SHGCPIR S.hygroscopicus gene cluster for polyketide immunosuppressant rapamycin
          Length = 107379

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    gggttcgacaagcacctcga 100
             ||||||||||||||||||||
Sbjct: 89325 gggttcgacaagcacctcga 89344



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>gb|AC137126.13| Mus musculus chromosome 15, clone RP24-250I9, complete sequence
          Length = 193459

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 555   caaaggaatgtatatgatta 574
             ||||||||||||||||||||
Sbjct: 75469 caaaggaatgtatatgatta 75488



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>gb|AC165956.4| Mus musculus BAC clone RP23-437I5 from chromosome 13, complete sequence
          Length = 211774

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 663    agtgaagagaacagtgatgg 682
              ||||||||||||||||||||
Sbjct: 160531 agtgaagagaacagtgatgg 160550


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,635,852
Number of Sequences: 3902068
Number of extensions: 5635852
Number of successful extensions: 100018
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99864
Number of HSP's gapped (non-prelim): 154
length of query: 708
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 685
effective length of database: 17,143,297,704
effective search space: 11743158927240
effective search space used: 11743158927240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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