No.
Definition
Score (bits)
E Value
1 dbj|AK067402.1| Oryza sativa (japonica cultivar-group) cDNA clon...
841
0.0
2 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
252
1e-63
3 gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...
252
1e-63
4 gb|BT017690.1| Zea mays clone EL01N0444C08.c mRNA sequence
178
2e-41
5 gb|AC150705.16| Medicago truncatula clone mth2-132b13, complete ...
64
7e-07
6 gb|BC041815.1| Homo sapiens cDNA clone IMAGE:5266959
44
0.62
7 gb|AC080128.21| Homo sapiens 3 BAC RP11-404G16 (Roswell Park Can...
44
0.62
8 dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012
44
0.62
9 emb|AL115108.1|CNS01C5O Botrytis cinerea strain T4 cDNA library
44
0.62
10 emb|AL112722.1|CNS01ABE Botrytis cinerea strain T4 cDNA library
44
0.62
11 emb|AL110852.1|CNS018VH Botrytis cinerea strain T4 cDNA library
44
0.62
12 ref|XM_805165.1| Trypanosoma cruzi strain CL Brener dispersed ge...
42
2.5
13 ref|XM_806824.1| Trypanosoma cruzi strain CL Brener dispersed ge...
42
2.5
14 gb|AC012101.7| Homo sapiens chromosome 18, clone RP11-396D4, com...
42
2.5
15 gb|AC090812.5| Homo sapiens chromosome 18, clone RP11-59J7, comp...
42
2.5
16 gb|AC022723.9| Homo sapiens chromosome 18, clone RP11-237L16, co...
42
2.5
17 emb|BX510366.5| Zebrafish DNA sequence from clone DKEY-189P24 in...
42
2.5
18 gb|AC164641.5| Mus musculus BAC clone RP23-393F10 from chromosom...
40
9.7
19 gb|AC016522.10| Mus musculus chromosome 7, clone RP23-352D23, co...
40
9.7
20 emb|CR555308.1| Azoarcus sp. EbN1 plasmid 2
40
9.7
21 emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosome 4, ...
40
9.7
22 emb|AL078468.1|ATT32A16 Arabidopsis thaliana DNA chromosome 4, B...
40
9.7
23 gb|AC109349.3| Homo sapiens BAC clone RP11-100L2 from 4, complet...
40
9.7
24 gb|AY078082.1| Homo sapiens Jun activation domain binding protei...
40
9.7
25 dbj|AB044970.1| Arabidopsis thaliana NDK4 gene for nucleoside di...
40
9.7
26 emb|X86780.1|SHGCPIR S.hygroscopicus gene cluster for polyketide...
40
9.7
27 gb|AC137126.13| Mus musculus chromosome 15, clone RP24-250I9, co...
40
9.7
28 gb|AC165956.4| Mus musculus BAC clone RP23-437I5 from chromosome...
40
9.7
>dbj|AP008218.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 252 bits (127), Expect = 1e-63
Identities = 187/207 (90%)
Strand = Plus / Plus
Query: 502 agttcctgagatgcagggaagcttggctttctgggattcttgatgatctagaccaaagga 561
||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 21479339 agttcttgagatgcagggaagcttggctttctgggattcttgatgacctggaccaaagga 21479398
Query: 562 atgtatatgattatctgaaaggcatggtgacttgccacaggacacatctatttgatgttg 621
||||||||| ||||| | |||||||||| || |||||| |||||||||||||||||||
Sbjct: 21479399 atgtatatgggtatctaacaggcatggtgggttaccacagaacacatctatttgatgttg 21479458
Query: 622 tcaatcaatatcgggcgatattcaacaatgataaatccggaagtgaagagaacagtgatg 681
||||||||||||| || ||||||||||||||||| ||||||||||| |||||| ||||
Sbjct: 21479459 tcaatcaatatcgagcaatattcaacaatgataagtccggaagtgatgagaactacgatg 21479518
Query: 682 gtgggctgcttttcagctgggcaatgc 708
|||| |||||||||||||||||||||
Sbjct: 21479519 gtggattgcttttcagctgggcaatgc 21479545
Score = 198 bits (100), Expect = 2e-47
Identities = 136/148 (91%)
Strand = Plus / Plus
Query: 109 tagaggagatacccaatttaacatctggttgcaccgagtttgttgagtccgcacatcaaa 168
||||||||||||| |||||||||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 21478102 tagaggagataccgaatttaacatctggctgcaccgagtttgttgagtcagcacagcaaa 21478161
Query: 169 ttttggaagagaggaagctcaatcagacattactagccaaccacagtaccttgctagacc 228
|||| ||||||||||||||||||||||||||||||||||| ||||| || |||| || |
Sbjct: 21478162 ttttagaagagaggaagctcaatcagacattactagccaatcacagcacactgcttgatc 21478221
Query: 229 tgcttgaaatcccacaacttatggacac 256
||||||||||||||||||| ||||||||
Sbjct: 21478222 tgcttgaaatcccacaactgatggacac 21478249
Score = 123 bits (62), Expect = 8e-25
Identities = 92/102 (90%)
Strand = Plus / Plus
Query: 9 gtggcggtggagaactacgccgcctttatagccgcctcagaggcgctctccttcgtgcgg 68
||||||||||||||||||| ||||| || ||||| || ||||||||||||||||| ||
Sbjct: 21475440 gtggcggtggagaactacggggccttcatcgccgcatccgaggcgctctccttcgtccgc 21475499
Query: 69 gcacagctcgaggggttcgacaagcacctcgaggcactggta 110
|| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 21475500 gcgcagctcgaggggttcgacaggcacctcgaggcactggta 21475541
Score = 115 bits (58), Expect = 2e-22
Identities = 85/94 (90%)
Strand = Plus / Plus
Query: 335 tttacctgtcatccaaggattagctgctgaagtcaagaagacgatacaatcactaatttc 394
||||||||| |||||||| ||||||| ||||||||||||||| ||||| ||| |||||||
Sbjct: 21478604 tttacctgttatccaaggcttagctgttgaagtcaagaagacaatacagtcattaatttc 21478663
Query: 395 gcagctactccaaaagcttcgatcaaatattcag 428
||||| ||||| |||||||||||||||||||||
Sbjct: 21478664 tcagcttctccagaagcttcgatcaaatattcag 21478697
Score = 103 bits (52), Expect = 8e-19
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 426 cagttacccgaatgcctccgtattgtcgcacatttgcgccggattggagtgttcagtgaa 485
||||| || ||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 21478917 cagttgcctgaatgcctccgtattgttgcacatttgcgccgcattggagtgttcagtgaa 21478976
Query: 486 tcagaatt 493
||||||||
Sbjct: 21478977 tcagaatt 21478984
Score = 83.8 bits (42), Expect = 7e-13
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 261 atacggaatgggaactatgatgaggcactcgatctagaagcttttgttagtaaaatttcg 320
||||| ||||||||||||||||||||||| || || ||||| |||||||||||||| ||
Sbjct: 21478453 atacgaaatgggaactatgatgaggcacttgacctggaagcctttgttagtaaaatatca 21478512
Query: 321 aaattgcaccctga 334
|| |||||||||||
Sbjct: 21478513 aagttgcaccctga 21478526
>gb|DP000011.1 | Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 252 bits (127), Expect = 1e-63
Identities = 187/207 (90%)
Strand = Plus / Plus
Query: 502 agttcctgagatgcagggaagcttggctttctgggattcttgatgatctagaccaaagga 561
||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 21407660 agttcttgagatgcagggaagcttggctttctgggattcttgatgacctggaccaaagga 21407719
Query: 562 atgtatatgattatctgaaaggcatggtgacttgccacaggacacatctatttgatgttg 621
||||||||| ||||| | |||||||||| || |||||| |||||||||||||||||||
Sbjct: 21407720 atgtatatgggtatctaacaggcatggtgggttaccacagaacacatctatttgatgttg 21407779
Query: 622 tcaatcaatatcgggcgatattcaacaatgataaatccggaagtgaagagaacagtgatg 681
||||||||||||| || ||||||||||||||||| ||||||||||| |||||| ||||
Sbjct: 21407780 tcaatcaatatcgagcaatattcaacaatgataagtccggaagtgatgagaactacgatg 21407839
Query: 682 gtgggctgcttttcagctgggcaatgc 708
|||| |||||||||||||||||||||
Sbjct: 21407840 gtggattgcttttcagctgggcaatgc 21407866
Score = 198 bits (100), Expect = 2e-47
Identities = 136/148 (91%)
Strand = Plus / Plus
Query: 109 tagaggagatacccaatttaacatctggttgcaccgagtttgttgagtccgcacatcaaa 168
||||||||||||| |||||||||||||| |||||||||||||||||||| ||||| ||||
Sbjct: 21406423 tagaggagataccgaatttaacatctggctgcaccgagtttgttgagtcagcacagcaaa 21406482
Query: 169 ttttggaagagaggaagctcaatcagacattactagccaaccacagtaccttgctagacc 228
|||| ||||||||||||||||||||||||||||||||||| ||||| || |||| || |
Sbjct: 21406483 ttttagaagagaggaagctcaatcagacattactagccaatcacagcacactgcttgatc 21406542
Query: 229 tgcttgaaatcccacaacttatggacac 256
||||||||||||||||||| ||||||||
Sbjct: 21406543 tgcttgaaatcccacaactgatggacac 21406570
Score = 123 bits (62), Expect = 8e-25
Identities = 92/102 (90%)
Strand = Plus / Plus
Query: 9 gtggcggtggagaactacgccgcctttatagccgcctcagaggcgctctccttcgtgcgg 68
||||||||||||||||||| ||||| || ||||| || ||||||||||||||||| ||
Sbjct: 21403761 gtggcggtggagaactacggggccttcatcgccgcatccgaggcgctctccttcgtccgc 21403820
Query: 69 gcacagctcgaggggttcgacaagcacctcgaggcactggta 110
|| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 21403821 gcgcagctcgaggggttcgacaggcacctcgaggcactggta 21403862
Score = 115 bits (58), Expect = 2e-22
Identities = 85/94 (90%)
Strand = Plus / Plus
Query: 335 tttacctgtcatccaaggattagctgctgaagtcaagaagacgatacaatcactaatttc 394
||||||||| |||||||| ||||||| ||||||||||||||| ||||| ||| |||||||
Sbjct: 21406925 tttacctgttatccaaggcttagctgttgaagtcaagaagacaatacagtcattaatttc 21406984
Query: 395 gcagctactccaaaagcttcgatcaaatattcag 428
||||| ||||| |||||||||||||||||||||
Sbjct: 21406985 tcagcttctccagaagcttcgatcaaatattcag 21407018
Score = 103 bits (52), Expect = 8e-19
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 426 cagttacccgaatgcctccgtattgtcgcacatttgcgccggattggagtgttcagtgaa 485
||||| || ||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 21407238 cagttgcctgaatgcctccgtattgttgcacatttgcgccgcattggagtgttcagtgaa 21407297
Query: 486 tcagaatt 493
||||||||
Sbjct: 21407298 tcagaatt 21407305
Score = 83.8 bits (42), Expect = 7e-13
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 261 atacggaatgggaactatgatgaggcactcgatctagaagcttttgttagtaaaatttcg 320
||||| ||||||||||||||||||||||| || || ||||| |||||||||||||| ||
Sbjct: 21406774 atacgaaatgggaactatgatgaggcacttgacctggaagcctttgttagtaaaatatca 21406833
Query: 321 aaattgcaccctga 334
|| |||||||||||
Sbjct: 21406834 aagttgcaccctga 21406847
>gb|AC165956.4 | Mus musculus BAC clone RP23-437I5 from chromosome 13, complete sequence
Length = 211774
Score = 40.1 bits (20), Expect = 9.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 663 agtgaagagaacagtgatgg 682
||||||||||||||||||||
Sbjct: 160531 agtgaagagaacagtgatgg 160550
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,635,852
Number of Sequences: 3902068
Number of extensions: 5635852
Number of successful extensions: 100018
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99864
Number of HSP's gapped (non-prelim): 154
length of query: 708
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 685
effective length of database: 17,143,297,704
effective search space: 11743158927240
effective search space used: 11743158927240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)