ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags18p17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_194664.1| Oryza sativa (japonica cultivar-group) putative... 42 2.2
2ref|NM_194662.1| Oryza sativa (japonica cultivar-group) putative... 42 2.2
3gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
4gb|AC131967.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
5gb|AC074282.4| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
6dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
7gb|AE004732.1| Pseudomonas aeruginosa PAO1, section 293 of 529 o... 42 2.2
8emb|AJ699306.2| Photobacterium damselae subsp. piscicida siderop... 42 2.2
9gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
10ref|XM_480423.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.8
11ref|XM_676203.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 8.8
12gb|AC117058.19| Rattus norvegicus 16 BAC CH230-318I9 (Children's... 40 8.8
13gb|AC112676.8| Mus musculus chromosome 9, clone RP23-174F7, comp... 40 8.8
14gb|AF397423.1| Homo sapiens SOST gene, 3' UTR, MEOX1 gene, 5' UT... 40 8.8
15gb|BC093278.1| Danio rerio similar to CG9351-PA, isoform A, mRNA... 40 8.8
16dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 8.8
17gb|AC055813.9| Homo sapiens chromosome 17, clone RP11-209M4, com... 40 8.8
18ref|XM_702585.1| PREDICTED: Danio rerio similar to CG9351-PA, is... 40 8.8
19ref|XM_702584.1| PREDICTED: Danio rerio similar to CG9351-PA, is... 40 8.8
20ref|XM_679737.1| PREDICTED: Danio rerio similar to CG9351-PA, is... 40 8.8
21ref|XM_702583.1| PREDICTED: Danio rerio similar to CG9351-PA, is... 40 8.8
22ref|XM_702581.1| PREDICTED: Danio rerio similar to CG9351-PA, is... 40 8.8
23ref|XM_701842.1| PREDICTED: Danio rerio similar to CG9351-PA, is... 40 8.8
24ref|XM_701841.1| PREDICTED: Danio rerio similar to CG9351-PA, is... 40 8.8
25ref|XM_678166.1| PREDICTED: Danio rerio similar to CG9351-PA, is... 40 8.8
26ref|XM_701840.1| PREDICTED: Danio rerio similar to CG9351-PA, is... 40 8.8
27ref|XM_701838.1| PREDICTED: Danio rerio similar to CG9351-PA, is... 40 8.8
28dbj|AK035451.1| Mus musculus adult male urinary bladder cDNA, RI... 40 8.8
29dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
30dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
31gb|AF326736.1|AF326736 Homo sapiens sclerostin gene, complete cds 40 8.8
32ref|XM_577554.1| PREDICTED: Rattus norvegicus similar to RIKEN c... 40 8.8
33gb|AC027243.20| Homo sapiens chromosome 15, clone RP11-685G9, co... 40 8.8
34gb|AC091100.14| Homo sapiens chromosome 15, clone RP11-593F23, c... 40 8.8
35dbj|AP004568.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
36dbj|AP006057.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
37dbj|AP005891.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
38emb|AL929220.13| Zebrafish DNA sequence from clone DKEY-65B13 in... 40 8.8
39emb|AL935037.9| Zebrafish DNA sequence from clone CH211-188E8 in... 40 8.8
40emb|BX088571.5| Zebrafish DNA sequence from clone CH211-208H7 in... 40 8.8
41gb|AC003098.1|AC003098 Homo sapiens chromosome 17, clone HRPC905... 40 8.8
42gb|BC108036.1| Danio rerio similar to CG9351-PA, isoform A, mRNA... 40 8.8 
>ref|NM_194664.1| Oryza sativa (japonica cultivar-group) putative O-deacetylbaccatin
            III-10-0-acetyltransferase (OSJNBa0049K09.22), mRNA
          Length = 1269

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 116  cgtcgtcatcaccctcgccgt 136
            |||||||||||||||||||||
Sbjct: 1128 cgtcgtcatcaccctcgccgt 1108
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>ref|NM_194662.1| Oryza sativa (japonica cultivar-group) putative O-deacetylbaccatin
            III-10-0-acetyltransferase (OSJNBa0049K09.20), mRNA
          Length = 1266

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 116  cgtcgtcatcaccctcgccgt 136
            |||||||||||||||||||||
Sbjct: 1125 cgtcgtcatcaccctcgccgt 1105
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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 116     cgtcgtcatcaccctcgccgt 136
               |||||||||||||||||||||
Sbjct: 1424178 cgtcgtcatcaccctcgccgt 1424158



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 116     cgtcgtcatcaccctcgccgt 136
               |||||||||||||||||||||
Sbjct: 1411275 cgtcgtcatcaccctcgccgt 1411255
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>gb|AC131967.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAa0049K09, complete sequence
          Length = 154181

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 116   cgtcgtcatcaccctcgccgt 136
             |||||||||||||||||||||
Sbjct: 36932 cgtcgtcatcaccctcgccgt 36912



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 116   cgtcgtcatcaccctcgccgt 136
             |||||||||||||||||||||
Sbjct: 24029 cgtcgtcatcaccctcgccgt 24009
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>gb|AC074282.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0049K09,
              complete sequence
          Length = 146576

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 116    cgtcgtcatcaccctcgccgt 136
              |||||||||||||||||||||
Sbjct: 123508 cgtcgtcatcaccctcgccgt 123488



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 116    cgtcgtcatcaccctcgccgt 136
              |||||||||||||||||||||
Sbjct: 110605 cgtcgtcatcaccctcgccgt 110585
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 116     cgtcgtcatcaccctcgccgt 136
               |||||||||||||||||||||
Sbjct: 1424178 cgtcgtcatcaccctcgccgt 1424158



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 116     cgtcgtcatcaccctcgccgt 136
               |||||||||||||||||||||
Sbjct: 1411275 cgtcgtcatcaccctcgccgt 1411255
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>gb|AE004732.1| Pseudomonas aeruginosa PAO1, section 293 of 529 of the complete
            genome
          Length = 11417

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 336  gccgccgccgactgcatgcgcaccgccga 364
            |||||||||||| || |||||||||||||
Sbjct: 4273 gccgccgccgacggcctgcgcaccgccga 4245
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>emb|AJ699306.2| Photobacterium damselae subsp. piscicida siderophore biosynthesis and
             transport gene cluster
          Length = 35691

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 563   aggcgataacccagttatcta 583
             |||||||||||||||||||||
Sbjct: 33537 aggcgataacccagttatcta 33517
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 116     cgtcgtcatcaccctcgccgt 136
               |||||||||||||||||||||
Sbjct: 1424175 cgtcgtcatcaccctcgccgt 1424155



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 116     cgtcgtcatcaccctcgccgt 136
               |||||||||||||||||||||
Sbjct: 1411272 cgtcgtcatcaccctcgccgt 1411252
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>ref|XM_480423.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 564

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 178 ggacgtcgtcgacgggcggg 197
           ||||||||||||||||||||
Sbjct: 133 ggacgtcgtcgacgggcggg 114
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>ref|XM_676203.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8026.2), mRNA
          Length = 1359

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 458 ccttgatgatgaaggcccag 477
           ||||||||||||||||||||
Sbjct: 122 ccttgatgatgaaggcccag 141
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>gb|AC117058.19| Rattus norvegicus 16 BAC CH230-318I9 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 181157

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     cctggaaacccagtcagcct 78
              ||||||||||||||||||||
Sbjct: 158042 cctggaaacccagtcagcct 158061
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>gb|AC112676.8| Mus musculus chromosome 9, clone RP23-174F7, complete sequence
          Length = 230293

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    catggaggaccagcctgtag 246
              ||||||||||||||||||||
Sbjct: 138386 catggaggaccagcctgtag 138367
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>gb|AF397423.1| Homo sapiens SOST gene, 3' UTR, MEOX1 gene, 5' UTR, and SOST/MEOX1
            intergenic region
          Length = 93790

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 224  attcatggaggaccagcctg 243
            ||||||||||||||||||||
Sbjct: 2235 attcatggaggaccagcctg 2254
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>gb|BC093278.1| Danio rerio similar to CG9351-PA, isoform A, mRNA (cDNA clone
           IMAGE:7395179), partial cds
          Length = 1620

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 518 aaactgggactttgccgtcc 537
           ||||||||||||||||||||
Sbjct: 65  aaactgggactttgccgtcc 46
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 121     tcatcaccctcgccgttgac 140
               ||||||||||||||||||||
Sbjct: 4103016 tcatcaccctcgccgttgac 4102997
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>gb|AC055813.9| Homo sapiens chromosome 17, clone RP11-209M4, complete sequence
          Length = 80117

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   attcatggaggaccagcctg 243
             ||||||||||||||||||||
Sbjct: 60559 attcatggaggaccagcctg 60540
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>ref|XM_702585.1| PREDICTED: Danio rerio similar to CG9351-PA, isoform A, transcript
            variant 7 (LOC558578), mRNA
          Length = 3753

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 518  aaactgggactttgccgtcc 537
            ||||||||||||||||||||
Sbjct: 2225 aaactgggactttgccgtcc 2206
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>ref|XM_702584.1| PREDICTED: Danio rerio similar to CG9351-PA, isoform A, transcript
            variant 6 (LOC558578), mRNA
          Length = 3768

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 518  aaactgggactttgccgtcc 537
            ||||||||||||||||||||
Sbjct: 2240 aaactgggactttgccgtcc 2221
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>ref|XM_679737.1| PREDICTED: Danio rerio similar to CG9351-PA, isoform A, transcript
            variant 1 (LOC558578), mRNA
          Length = 3753

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 518  aaactgggactttgccgtcc 537
            ||||||||||||||||||||
Sbjct: 2225 aaactgggactttgccgtcc 2206
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>ref|XM_702583.1| PREDICTED: Danio rerio similar to CG9351-PA, isoform A, transcript
            variant 5 (LOC558578), mRNA
          Length = 3036

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 518  aaactgggactttgccgtcc 537
            ||||||||||||||||||||
Sbjct: 1508 aaactgggactttgccgtcc 1489
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>ref|XM_702581.1| PREDICTED: Danio rerio similar to CG9351-PA, isoform A, transcript
            variant 3 (LOC558578), mRNA
          Length = 4483

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 518  aaactgggactttgccgtcc 537
            ||||||||||||||||||||
Sbjct: 2955 aaactgggactttgccgtcc 2936
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>ref|XM_701842.1| PREDICTED: Danio rerio similar to CG9351-PA, isoform A, transcript
            variant 7 (LOC556627), mRNA
          Length = 3753

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 518  aaactgggactttgccgtcc 537
            ||||||||||||||||||||
Sbjct: 2225 aaactgggactttgccgtcc 2206
to top
>ref|XM_701841.1| PREDICTED: Danio rerio similar to CG9351-PA, isoform A, transcript
            variant 6 (LOC556627), mRNA
          Length = 3768

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 518  aaactgggactttgccgtcc 537
            ||||||||||||||||||||
Sbjct: 2240 aaactgggactttgccgtcc 2221
to top
>ref|XM_678166.1| PREDICTED: Danio rerio similar to CG9351-PA, isoform A, transcript
            variant 1 (LOC556627), mRNA
          Length = 3753

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 518  aaactgggactttgccgtcc 537
            ||||||||||||||||||||
Sbjct: 2225 aaactgggactttgccgtcc 2206
to top
>ref|XM_701840.1| PREDICTED: Danio rerio similar to CG9351-PA, isoform A, transcript
            variant 5 (LOC556627), mRNA
          Length = 3036

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 518  aaactgggactttgccgtcc 537
            ||||||||||||||||||||
Sbjct: 1508 aaactgggactttgccgtcc 1489
to top
>ref|XM_701838.1| PREDICTED: Danio rerio similar to CG9351-PA, isoform A, transcript
            variant 3 (LOC556627), mRNA
          Length = 4483

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 518  aaactgggactttgccgtcc 537
            ||||||||||||||||||||
Sbjct: 2955 aaactgggactttgccgtcc 2936
to top
>dbj|AK035451.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length
            enriched library, clone:9530050G02
            product:unclassifiable, full insert sequence
          Length = 3728

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 227  catggaggaccagcctgtag 246
            ||||||||||||||||||||
Sbjct: 2792 catggaggaccagcctgtag 2773
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 84       ggtcgagccgccgccccggccatg 107
                ||||||||||||||||||| ||||
Sbjct: 17217740 ggtcgagccgccgccccggtcatg 17217763
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 178     ggacgtcgtcgacgggcggg 197
               ||||||||||||||||||||
Sbjct: 5042132 ggacgtcgtcgacgggcggg 5042151
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>gb|AF326736.1|AF326736 Homo sapiens sclerostin gene, complete cds
          Length = 21501

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   attcatggaggaccagcctg 243
             ||||||||||||||||||||
Sbjct: 17595 attcatggaggaccagcctg 17614
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>ref|XM_577554.1| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 1700013B16
            (LOC502113), mRNA
          Length = 4404

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 136  ttgacaagagcagcgccatc 155
            ||||||||||||||||||||
Sbjct: 2929 ttgacaagagcagcgccatc 2948
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>gb|AC027243.20| Homo sapiens chromosome 15, clone RP11-685G9, complete sequence
          Length = 195806

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 607    ttctccggtagtctctcttc 626
              ||||||||||||||||||||
Sbjct: 154586 ttctccggtagtctctcttc 154567
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>gb|AC091100.14| Homo sapiens chromosome 15, clone RP11-593F23, complete sequence
          Length = 180227

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 607  ttctccggtagtctctcttc 626
            ||||||||||||||||||||
Sbjct: 2868 ttctccggtagtctctcttc 2849
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>dbj|AP004568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0547A06
          Length = 150922

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   ggacgtcgtcgacgggcggg 197
             ||||||||||||||||||||
Sbjct: 79689 ggacgtcgtcgacgggcggg 79708
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>dbj|AP006057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1342C04
          Length = 172097

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 84     ggtcgagccgccgccccggccatg 107
              ||||||||||||||||||| ||||
Sbjct: 158497 ggtcgagccgccgccccggtcatg 158520
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>dbj|AP005891.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:B1045B05
          Length = 140992

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 84   ggtcgagccgccgccccggccatg 107
            ||||||||||||||||||| ||||
Sbjct: 4612 ggtcgagccgccgccccggtcatg 4635
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>emb|AL929220.13| Zebrafish DNA sequence from clone DKEY-65B13 in linkage group 20,
              complete sequence
          Length = 227539

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 518    aaactgggactttgccgtcc 537
              ||||||||||||||||||||
Sbjct: 107730 aaactgggactttgccgtcc 107749
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>emb|AL935037.9| Zebrafish DNA sequence from clone CH211-188E8 in linkage group 1,
             complete sequence
          Length = 141034

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 454   tctaccttgatgatgaaggc 473
             ||||||||||||||||||||
Sbjct: 46973 tctaccttgatgatgaaggc 46992
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>emb|BX088571.5| Zebrafish DNA sequence from clone CH211-208H7 in linkage group 1,
              complete sequence
          Length = 214441

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 454    tctaccttgatgatgaaggc 473
              ||||||||||||||||||||
Sbjct: 103285 tctaccttgatgatgaaggc 103266
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>gb|AC003098.1|AC003098 Homo sapiens chromosome 17, clone HRPC905N1, complete sequence
          Length = 94752

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 224  attcatggaggaccagcctg 243
            ||||||||||||||||||||
Sbjct: 3635 attcatggaggaccagcctg 3616
to top
>gb|BC108036.1| Danio rerio similar to CG9351-PA, isoform A, mRNA (cDNA clone
           IMAGE:7396497), partial cds
          Length = 1528

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 518 aaactgggactttgccgtcc 537
           ||||||||||||||||||||
Sbjct: 279 aaactgggactttgccgtcc 260


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,016,776
Number of Sequences: 3902068
Number of extensions: 4016776
Number of successful extensions: 70205
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69756
Number of HSP's gapped (non-prelim): 449
length of query: 647
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 624
effective length of database: 17,143,297,704
effective search space: 10697417767296
effective search space used: 10697417767296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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