ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags19e23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478772.1| Oryza sativa (japonica cultivar-group), mRNA 250 4e-63
2dbj|AK065242.1| Oryza sativa (japonica cultivar-group) cDNA clon... 242 9e-61
3gb|AY108240.1| Zea mays PCO100302 mRNA sequence 192 7e-46
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
5dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
6emb|AJ133751.1|SOL133751 Spinacia oleracea mRNA for chloroplast ... 56 1e-04
7ref|NM_205406.1| Gallus gallus Rous sarcoma virus transcription ... 48 0.027
8gb|U23162.1|GGU23162 Gallus gallus Rous sarcoma virus transcript... 48 0.027
9gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 46 0.11
10emb|AL732555.7| Mouse DNA sequence from clone RP23-124I19 on chr... 46 0.11
11ref|XM_632378.1| Dictyostelium discoideum hypothetical protein (... 44 0.42
12gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 44 0.42
13ref|XM_786916.1| PREDICTED: Strongylocentrotus purpuratus simila... 44 0.42
14emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete g... 44 0.42
15gb|AE014133.1| Streptococcus mutans UA159, complete genome 44 0.42
16gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
17ref|XM_583735.2| PREDICTED: Bos taurus similar to transformation... 42 1.7
18ref|XM_460680.1| Debaryomyces hansenii CBS767 hypothetical prote... 42 1.7
19gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
20emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS... 42 1.7
21gb|AC122725.30| Medicago truncatula clone mth2-4c11, complete se... 42 1.7
22gb|AF453501.1| Actinosynnema pretiosum subsp. auranticum maytans... 42 1.7
23gb|AC021193.7| Homo sapiens BAC clone RP11-774G5 from 4, complet... 42 1.7
24gb|AC010260.7| Homo sapiens chromosome 5 clone CTC-458I2, comple... 42 1.7
25dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
26gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
27ref|XM_463197.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.5
28ref|NM_197912.1| Oryza sativa (japonica cultivar-group) putative... 40 6.5
29gb|AC153558.7| Mus musculus 10 BAC RP23-367D2 (Roswell Park Canc... 40 6.5
30gb|AC099644.6| Mus musculus chromosome 15, clone RP24-359B20, co... 40 6.5
31gb|AC116739.13| Mus musculus chromosome 17, clone RP23-435B24, c... 40 6.5
32gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.5
33gb|AC133750.2| Homo sapiens 3 BAC RP11-619K22 (Roswell Park Canc... 40 6.5
34gb|AC134509.2| Homo sapiens 3 BAC RP11-427D1 (Roswell Park Cance... 40 6.5
35emb|AL139260.19| Human DNA sequence from clone RP5-864K19 on chr... 40 6.5
36gb|AC026877.15| Homo sapiens 3 BAC RP11-550F7 (Roswell Park Canc... 40 6.5
37ref|XM_787074.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.5
38gb|AC104518.5| Mus Musculus Strain 129S6/SvEvTac chromosome 17 B... 40 6.5
39emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete ... 40 6.5
40gb|AC040978.8| Homo sapiens chromosome 8, clone RP11-570L14, com... 40 6.5
41dbj|AK097496.1| Homo sapiens cDNA FLJ40177 fis, clone TESTI2017816 40 6.5
42gb|AC112211.2| Homo sapiens chromosome 3 clone RP11-627J17, comp... 40 6.5
43ref|NM_003496.1| Homo sapiens transformation/transcription domai... 40 6.5
44ref|XM_690909.1| PREDICTED: Danio rerio similar to syntaxin bind... 40 6.5
45gb|AC148059.3| Callicebus moloch clone LB5-40A6, complete sequence 40 6.5
46gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 gen... 40 6.5
47gb|AC159099.4| Mus musculus chromosome 15, clone RP24-132A22, co... 40 6.5
48dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
49ref|XM_623364.1| PREDICTED: Apis mellifera similar to CG11859-PA... 40 6.5
50dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
51gb|AC097280.8| Oryza sativa chromosome 3 BAC OSJNBb0111B07 genom... 40 6.5
52gb|AC107033.3| Homo sapiens 12 BAC RP11-669N7 (Roswell Park Canc... 40 6.5
53dbj|AK105726.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
54dbj|AK099267.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
55dbj|AK099219.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
56dbj|AK070527.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
57gb|AC110562.17| Mus musculus chromosome 17, clone RP23-268M4, co... 40 6.5
58emb|BX322637.7| Zebrafish DNA sequence from clone DKEY-22A1 in l... 40 6.5
59emb|CR936503.1| Lactobacillus sakei strain 23K complete genome 40 6.5
60gb|AY107541.1| Zea mays PCO126911 mRNA sequence 40 6.5
61gb|AF076974.1|AF076974 Homo sapiens TRRAP protein (TRRAP) mRNA, ... 40 6.5
62gb|AF110377.1|AF110377 Homo sapiens PCAF-associated factor 400 (... 40 6.5
63gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 6.5
64gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.5
65gb|AC153561.5| Mus musculus 10 BAC RP23-426E11 (Roswell Park Can... 40 6.5
66gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
67dbj|AB209489.1| Homo sapiens mRNA for Transformation/transcripti... 40 6.5
68gb|DP000019.1| Callicebus moloch target 1 genomic scaffold 40 6.5 
>ref|XM_478772.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1227

 Score =  250 bits (126), Expect = 4e-63
 Identities = 228/262 (87%)
 Strand = Plus / Plus

                                                                       
Query: 222 ttcttcaacactcggacaagagagcagttttgaggcatgccactaatgaagaaattgagg 281
           |||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 279 ttcttcaaaactcggacaagagagcagtattgaggcatgccactattgaagaaattgagg 338

                                                                       
Query: 282 aagaaaagacaatcgttgaagaacaagctaaagaaaagatggagaaggccattgaaacag 341
            ||||||  |  || ||||||| ||||||| ||||| |||||| ||||| ||||||||||
Sbjct: 339 cagaaaaatctgtcattgaagaccaagctagagaaaggatggaaaaggcaattgaaacag 398

                                                                       
Query: 342 ttcagtcgaacttcaataccgtgaggactgggcgggcaaacccgtctatgcttgacagga 401
           | ||    ||||||||||| |||||||| ||||||||||||||  |||||||||||||||
Sbjct: 399 tccaaaataacttcaatactgtgaggacagggcgggcaaacccagctatgcttgacagga 458

                                                                       
Query: 402 ttgaggttgagtactatggaactcctgtaaacttgaagactattgcacaagtaaatactc 461
           ||||||||||||| ||||||||||| || ||||||||||  || |||||  |||| ||||
Sbjct: 459 ttgaggttgagtattatggaactccagtgaacttgaagagcatcgcacagataaacactc 518

                                 
Query: 462 cagatgcgacttctcttcttat 483
           ||||||| |||||||| |||||
Sbjct: 519 cagatgcaacttctctccttat 540



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 45  cgctccacgccgtctcccctgcggcggcggcacctccgccccgcgccctctcctc 99
           ||||||||||||||||||| |||||||||||  | ||||| ||||| ||||||||
Sbjct: 105 cgctccacgccgtctcccccgcggcggcggccgccccgccgcgcgcgctctcctc 159
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>dbj|AK065242.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002I12, full
           insert sequence
          Length = 1226

 Score =  242 bits (122), Expect = 9e-61
 Identities = 227/262 (86%)
 Strand = Plus / Plus

                                                                       
Query: 222 ttcttcaacactcggacaagagagcagttttgaggcatgccactaatgaagaaattgagg 281
           |||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 279 ttcttcaaaactcggacaagagagcagtattgaggcatgccactattgaagaaattgagg 338

                                                                       
Query: 282 aagaaaagacaatcgttgaagaacaagctaaagaaaagatggagaaggccattgaaacag 341
            ||||||  |   | ||||||| ||||||| ||||| |||||| ||||| ||||||||||
Sbjct: 339 cagaaaaatctgacattgaagaccaagctagagaaaggatggaaaaggcaattgaaacag 398

                                                                       
Query: 342 ttcagtcgaacttcaataccgtgaggactgggcgggcaaacccgtctatgcttgacagga 401
           | ||    ||||||||||| |||||||| ||||||||||||||  |||||||||||||||
Sbjct: 399 tccaaaataacttcaatactgtgaggacagggcgggcaaacccagctatgcttgacagga 458

                                                                       
Query: 402 ttgaggttgagtactatggaactcctgtaaacttgaagactattgcacaagtaaatactc 461
           ||||||||||||| ||||||||||| || ||||||||||  || |||||  |||| ||||
Sbjct: 459 ttgaggttgagtattatggaactccagtgaacttgaagagcatcgcacagataaacactc 518

                                 
Query: 462 cagatgcgacttctcttcttat 483
           ||||||| |||||||| |||||
Sbjct: 519 cagatgcaacttctctccttat 540



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 45  cgctccacgccgtctcccctgcggcggcggcacctccgccccgcgccctctcctc 99
           ||||||||||||||||||| |||||||||||  | ||||| ||||| ||||||||
Sbjct: 105 cgctccacgccgtctcccccgcggcggcggccgccccgccgcgcgcgctctcctc 159
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>gb|AY108240.1| Zea mays PCO100302 mRNA sequence
          Length = 776

 Score =  192 bits (97), Expect = 7e-46
 Identities = 223/265 (84%)
 Strand = Plus / Plus

                                                                       
Query: 219 tggttcttcaacactcggacaagagagcagttttgaggcatgccactaatgaagaaattg 278
           ||||||||  |||||||||||||||||||||| ||| ||||||||||| |||||||||||
Sbjct: 201 tggttcttggacactcggacaagagagcagttctgacgcatgccactattgaagaaattg 260

                                                                       
Query: 279 aggaagaaaagacaatcgttgaagaacaagctaaagaaaagatggagaaggccattgaaa 338
           | |  || ||  |  || | ||||| |||||||||||||||||||||||||| || ||||
Sbjct: 261 aagcggagaaatccctcatcgaagaccaagctaaagaaaagatggagaaggcgatcgaaa 320

                                                                       
Query: 339 cagttcagtcgaacttcaataccgtgaggactgggcgggcaaacccgtctatgcttgaca 398
           |||| ||  | |||||||| || |||||||| ||||| |||| |||| | ||||||||| 
Sbjct: 321 cagtccaaactaacttcaacactgtgaggacagggcgtgcaagcccggccatgcttgacc 380

                                                                       
Query: 399 ggattgaggttgagtactatggaactcctgtaaacttgaagactattgcacaagtaaata 458
           |||| ||||| |||||||| |||||||| || ||||||||||  ||||||||  |||  |
Sbjct: 381 ggatcgaggtcgagtactacggaactccagtgaacttgaagagcattgcacagataagca 440

                                    
Query: 459 ctccagatgcgacttctcttcttat 483
           |||||||||| ||||||||||||||
Sbjct: 441 ctccagatgcaacttctcttcttat 465



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                          
Query: 40 catggcgctccacgccgtctcccctgcggcgg 71
          |||||||||||||||||||||||| |||||||
Sbjct: 22 catggcgctccacgccgtctcccccgcggcgg 53
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                            
Query: 313      agaaaagatggagaaggccattgaaacagttcagtcgaacttcaataccgtgaggactgg 372
                ||||| |||||| ||||| ||||||||||| ||    ||||||||||| |||||||| ||
Sbjct: 22951363 agaaaggatggaaaaggcaattgaaacagtccaaaataacttcaatactgtgaggacagg 22951422

                                                    
Query: 373      gcgggcaaacccgtctatgcttgacaggattgaggt 408
                ||||||||||||  ||||||||||||||||||||||
Sbjct: 22951423 gcgggcaaacccagctatgcttgacaggattgaggt 22951458



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 68/79 (86%)
 Strand = Plus / Plus

                                                                            
Query: 405      aggttgagtactatggaactcctgtaaacttgaagactattgcacaagtaaatactccag 464
                |||||||||| ||||||||||| || ||||||||||  || |||||  |||| |||||||
Sbjct: 22951794 aggttgagtattatggaactccagtgaacttgaagagcatcgcacagataaacactccag 22951853

                                   
Query: 465      atgcgacttctcttcttat 483
                |||| |||||||| |||||
Sbjct: 22951854 atgcaacttctctccttat 22951872



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                               
Query: 242      agagcagttttgaggcatgccactaatgaagaaattgaggaagaaaa 288
                |||||||| |||||||||||||||| |||||||||||||| ||||||
Sbjct: 22951202 agagcagtattgaggcatgccactattgaagaaattgaggcagaaaa 22951248



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                       
Query: 45       cgctccacgccgtctcccctgcggcggcggcacctccgccccgcgccctctcctc 99
                ||||||||||||||||||| |||||||||||  | ||||| ||||| ||||||||
Sbjct: 22949905 cgctccacgccgtctcccccgcggcggcggccgccccgccgcgcgcgctctcctc 22949959
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>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1121_A05
          Length = 172668

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                         
Query: 313   agaaaagatggagaaggccattgaaacagttcagtcgaacttcaataccgtgaggactgg 372
             ||||| |||||| ||||| ||||||||||| ||    ||||||||||| |||||||| ||
Sbjct: 26577 agaaaggatggaaaaggcaattgaaacagtccaaaataacttcaatactgtgaggacagg 26636

                                                 
Query: 373   gcgggcaaacccgtctatgcttgacaggattgaggt 408
             ||||||||||||  ||||||||||||||||||||||
Sbjct: 26637 gcgggcaaacccagctatgcttgacaggattgaggt 26672



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 68/79 (86%)
 Strand = Plus / Plus

                                                                         
Query: 405   aggttgagtactatggaactcctgtaaacttgaagactattgcacaagtaaatactccag 464
             |||||||||| ||||||||||| || ||||||||||  || |||||  |||| |||||||
Sbjct: 27008 aggttgagtattatggaactccagtgaacttgaagagcatcgcacagataaacactccag 27067

                                
Query: 465   atgcgacttctcttcttat 483
             |||| |||||||| |||||
Sbjct: 27068 atgcaacttctctccttat 27086



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                            
Query: 242   agagcagttttgaggcatgccactaatgaagaaattgaggaagaaaa 288
             |||||||| |||||||||||||||| |||||||||||||| ||||||
Sbjct: 26416 agagcagtattgaggcatgccactattgaagaaattgaggcagaaaa 26462



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                    
Query: 45    cgctccacgccgtctcccctgcggcggcggcacctccgccccgcgccctctcctc 99
             ||||||||||||||||||| |||||||||||  | ||||| ||||| ||||||||
Sbjct: 25119 cgctccacgccgtctcccccgcggcggcggccgccccgccgcgcgcgctctcctc 25173
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>emb|AJ133751.1|SOL133751 Spinacia oleracea mRNA for chloroplast ribosome recycling factor
          Length = 1109

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 399 ggattgaggttgagtactatggaactcctgtaaacttgaa 438
           |||| |||||||||||||||||||||||||| | ||||||
Sbjct: 400 ggatagaggttgagtactatggaactcctgtcagcttgaa 439
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>ref|NM_205406.1| Gallus gallus Rous sarcoma virus transcription enhancer factor II
           (LOC396371), mRNA
          Length = 1459

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 54  ccgtctcccctgcggcggcggcac 77
           ||||||||||||||||||||||||
Sbjct: 263 ccgtctcccctgcggcggcggcac 240
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>gb|U23162.1|GGU23162 Gallus gallus Rous sarcoma virus transcription enhancer factor II
           mRNA, complete cds
          Length = 1459

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 54  ccgtctcccctgcggcggcggcac 77
           ||||||||||||||||||||||||
Sbjct: 263 ccgtctcccctgcggcggcggcac 240
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>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                              
Query: 377     gcaaacccgtctatgcttgacaggattgaggttgagtactatggaac 423
               ||||||||  |||||||||| || ||||| ||||| |||||||||||
Sbjct: 1939940 gcaaacccagctatgcttgatagaattgaagttgactactatggaac 1939986
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>emb|AL732555.7| Mouse DNA sequence from clone RP23-124I19 on chromosome 4, complete
              sequence
          Length = 157653

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 293    atcgttgaagaacaagctaaaga 315
              |||||||||||||||||||||||
Sbjct: 151914 atcgttgaagaacaagctaaaga 151892
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>ref|XM_632378.1| Dictyostelium discoideum hypothetical protein (DDB0187197), partial
             mRNA
          Length = 15669

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 267   atgaagaaattgaggaagaaaa 288
             ||||||||||||||||||||||
Sbjct: 10064 atgaagaaattgaggaagaaaa 10085
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 45      cgctccacgccgtctcccctgcggcggcgg 74
               |||||||||||| ||||| |||||||||||
Sbjct: 3262434 cgctccacgccgcctcccttgcggcggcgg 3262405
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>ref|XM_786916.1| PREDICTED: Strongylocentrotus purpuratus similar to CG7364-PA
           (LOC587169), partial mRNA
          Length = 1008

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 265 taatgaagaaattgaggaagaa 286
           ||||||||||||||||||||||
Sbjct: 745 taatgaagaaattgaggaagaa 724
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>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome
          Length = 2414465

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 305     caagctaaagaaaagatggaga 326
               ||||||||||||||||||||||
Sbjct: 1180766 caagctaaagaaaagatggaga 1180787
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>gb|AE014133.1| Streptococcus mutans UA159, complete genome
          Length = 2030921

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 273     aaattgaggaagaaaagacaat 294
               ||||||||||||||||||||||
Sbjct: 1272532 aaattgaggaagaaaagacaat 1272511
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>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08,
              complete sequence
          Length = 197156

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 63     ctgcggcggcggcacctccgccccg 87
              ||||||||||||| |||||||||||
Sbjct: 194929 ctgcggcggcggcgcctccgccccg 194953
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>ref|XM_583735.2| PREDICTED: Bos taurus similar to transformation/transcription
            domain-associated protein (LOC507169), mRNA
          Length = 14163

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 319  gatggagaaggccattgaaac 339
            |||||||||||||||||||||
Sbjct: 3435 gatggagaaggccattgaaac 3455
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>ref|XM_460680.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F08228g)
           partial mRNA
          Length = 3276

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 295 cgttgaagaacaagctaaagaaaag 319
           ||||||||||||| |||||||||||
Sbjct: 405 cgttgaagaacaacctaaagaaaag 429
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>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0041J17, complete sequence
          Length = 148829

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 63    ctgcggcggcggcacctccgccccg 87
             ||||||||||||| |||||||||||
Sbjct: 34284 ctgcggcggcggcgcctccgccccg 34308
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>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces
              hansenii
          Length = 2336804

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 295    cgttgaagaacaagctaaagaaaag 319
              ||||||||||||| |||||||||||
Sbjct: 656663 cgttgaagaacaacctaaagaaaag 656639
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>gb|AC122725.30| Medicago truncatula clone mth2-4c11, complete sequence
          Length = 134892

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 368   actgggcgggcaaacccgtctatgcttgacaggattgaggt 408
             |||||| | |||| |||||||||||||||||  ||||||||
Sbjct: 71046 actgggagagcaaccccgtctatgcttgacaaaattgaggt 71006
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>gb|AF453501.1| Actinosynnema pretiosum subsp. auranticum maytansinoid antitumor agent
             ansamitocin biosynthetic gene cluster I, partial sequence
          Length = 82746

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 64    tgcggcggcggcacctccgccccgcgccc 92
             ||||||||| |||||| ||||||||||||
Sbjct: 48482 tgcggcggctgcacctgcgccccgcgccc 48454
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>gb|AC021193.7| Homo sapiens BAC clone RP11-774G5 from 4, complete sequence
          Length = 217985

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 271    agaaattgaggaagaaaagac 291
              |||||||||||||||||||||
Sbjct: 165763 agaaattgaggaagaaaagac 165783
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>gb|AC010260.7| Homo sapiens chromosome 5 clone CTC-458I2, complete sequence
          Length = 150528

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 306   aagctaaagaaaagatggagaaggc 330
             ||||| |||||||||||||||||||
Sbjct: 36883 aagcttaagaaaagatggagaaggc 36859
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 63       ctgcggcggcggcacctccgccccg 87
                ||||||||||||| |||||||||||
Sbjct: 18931086 ctgcggcggcggcgcctccgccccg 18931110
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 63       ctgcggcggcggcacctccgccccg 87
                ||||||||||||| |||||||||||
Sbjct: 19089735 ctgcggcggcggcgcctccgccccg 19089759
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>ref|XM_463197.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 702

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 61  ccctgcggcggcggcacctccgcc 84
           |||||||||||||||||| |||||
Sbjct: 426 ccctgcggcggcggcaccgccgcc 403
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>ref|NM_197912.1| Oryza sativa (japonica cultivar-group) putative peptide transporter
           (OSJNBa0056G17.8), mRNA
          Length = 1748

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 298 tgaagaacaagctaaagaaa 317
           ||||||||||||||||||||
Sbjct: 612 tgaagaacaagctaaagaaa 593
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>gb|AC153558.7| Mus musculus 10 BAC RP23-367D2 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 207823

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 403   tgaggttgagtactatggaa 422
             ||||||||||||||||||||
Sbjct: 41538 tgaggttgagtactatggaa 41557
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>gb|AC099644.6| Mus musculus chromosome 15, clone RP24-359B20, complete sequence
          Length = 135063

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 270   aagaaattgaggaagaaaagacaa 293
             ||||||||||||||||||| ||||
Sbjct: 61728 aagaaattgaggaagaaaacacaa 61705
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>gb|AC116739.13| Mus musculus chromosome 17, clone RP23-435B24, complete sequence
          Length = 222382

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 186    agtctggagcagtgggtttc 205
              ||||||||||||||||||||
Sbjct: 214024 agtctggagcagtgggtttc 214005
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 61       ccctgcggcggcggcacctccgcc 84
                |||||||||||||||||| |||||
Sbjct: 23357917 ccctgcggcggcggcaccgccgcc 23357894
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>gb|AC133750.2| Homo sapiens 3 BAC RP11-619K22 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 87386

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 311  aaagaaaagatggagaaggc 330
            ||||||||||||||||||||
Sbjct: 2123 aaagaaaagatggagaaggc 2104
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>gb|AC134509.2| Homo sapiens 3 BAC RP11-427D1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 86901

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 211   tgtgcctttggttcttcaac 230
             ||||||||||||||||||||
Sbjct: 57489 tgtgcctttggttcttcaac 57508
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>emb|AL139260.19| Human DNA sequence from clone RP5-864K19 on chromosome 1p32.3-34.1
              Contains the MYCBP gene for c-myc binding protein, the
              GJA10 gene for gap junction protein alpha 10, the RHBDL2
              gene for rhomboid veinlet-like 2 (Drosophila), a novel gene
              and the RRAGC gene for Ras-related GTP binding C, complete
              sequence
          Length = 155138

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    agaaattgaggaagaaaaga 290
              ||||||||||||||||||||
Sbjct: 108379 agaaattgaggaagaaaaga 108398
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>gb|AC026877.15| Homo sapiens 3 BAC RP11-550F7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 198824

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    agaaattgaggaagaaaaga 290
              ||||||||||||||||||||
Sbjct: 192670 agaaattgaggaagaaaaga 192651
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>ref|XM_787074.1| PREDICTED: Strongylocentrotus purpuratus similar to CG7364-PA
           (LOC587342), partial mRNA
          Length = 1014

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 atgaagaaattgaggaagaa 286
           ||||||||||||||||||||
Sbjct: 749 atgaagaaattgaggaagaa 730
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>gb|AC104518.5| Mus Musculus Strain 129S6/SvEvTac chromosome 17 BAC, RP22-187D17,
            Complete Sequence, complete sequence
          Length = 163367

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 186  agtctggagcagtgggtttc 205
            ||||||||||||||||||||
Sbjct: 2196 agtctggagcagtgggtttc 2215
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>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29
          Length = 314100

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 59     tcccctgcggcggcggcacctccg 82
              |||||| |||||||||||||||||
Sbjct: 118667 tccccttcggcggcggcacctccg 118644
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>gb|AC040978.8| Homo sapiens chromosome 8, clone RP11-570L14, complete sequence
          Length = 180983

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 266    aatgaagaaattgaggaaga 285
              ||||||||||||||||||||
Sbjct: 132193 aatgaagaaattgaggaaga 132174
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>dbj|AK097496.1| Homo sapiens cDNA FLJ40177 fis, clone TESTI2017816
          Length = 2223

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 310 taaagaaaagatggagaagg 329
           ||||||||||||||||||||
Sbjct: 513 taaagaaaagatggagaagg 494
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>gb|AC112211.2| Homo sapiens chromosome 3 clone RP11-627J17, complete sequence
          Length = 182509

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 256    gcatgccactaatgaagaaa 275
              ||||||||||||||||||||
Sbjct: 113687 gcatgccactaatgaagaaa 113668
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>ref|NM_003496.1| Homo sapiens transformation/transcription domain-associated protein
            (TRRAP), mRNA
          Length = 12563

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 320  atggagaaggccattgaaac 339
            ||||||||||||||||||||
Sbjct: 3024 atggagaaggccattgaaac 3043
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>ref|XM_690909.1| PREDICTED: Danio rerio similar to syntaxin binding protein 5-like
            (LOC567605), mRNA
          Length = 4010

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 18   accactccgcctgctgccgc 37
            ||||||||||||||||||||
Sbjct: 3425 accactccgcctgctgccgc 3406
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>gb|AC148059.3| Callicebus moloch clone LB5-40A6, complete sequence
          Length = 170861

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 307   agctaaagaaaagatggagaaggc 330
             |||||||||||||||| |||||||
Sbjct: 98990 agctaaagaaaagatgcagaaggc 99013
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>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete
             sequence
          Length = 139999

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 298   tgaagaacaagctaaagaaa 317
             ||||||||||||||||||||
Sbjct: 50334 tgaagaacaagctaaagaaa 50315
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>gb|AC159099.4| Mus musculus chromosome 15, clone RP24-132A22, complete sequence
          Length = 147359

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 270   aagaaattgaggaagaaaagacaa 293
             ||||||||||||||||||| ||||
Sbjct: 22230 aagaaattgaggaagaaaacacaa 22253
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 298      tgaagaacaagctaaagaaa 317
                ||||||||||||||||||||
Sbjct: 22595665 tgaagaacaagctaaagaaa 22595646
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>ref|XM_623364.1| PREDICTED: Apis mellifera similar to CG11859-PA (LOC550969), mRNA
          Length = 1321

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 267  atgaagaaattgaggaagaa 286
            ||||||||||||||||||||
Sbjct: 1011 atgaagaaattgaggaagaa 1030
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 61       ccctgcggcggcggcacctccgcc 84
                |||||||||||||||||| |||||
Sbjct: 23350945 ccctgcggcggcggcaccgccgcc 23350922
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>gb|AC097280.8| Oryza sativa chromosome 3 BAC OSJNBb0111B07 genomic sequence, complete
             sequence
          Length = 129647

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 61    ccctgcggcggcggcacctccgcc 84
             |||||||||||||||||| |||||
Sbjct: 40573 ccctgcggcggcggcaccgccgcc 40550
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>gb|AC107033.3| Homo sapiens 12 BAC RP11-669N7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 182000

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 310    taaagaaaagatggagaagg 329
              ||||||||||||||||||||
Sbjct: 110816 taaagaaaagatggagaagg 110835
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>dbj|AK105726.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-G10, full
           insert sequence
          Length = 1942

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 298 tgaagaacaagctaaagaaa 317
           ||||||||||||||||||||
Sbjct: 669 tgaagaacaagctaaagaaa 650
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>dbj|AK099267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018P15, full
           insert sequence
          Length = 1938

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 298 tgaagaacaagctaaagaaa 317
           ||||||||||||||||||||
Sbjct: 659 tgaagaacaagctaaagaaa 640
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>dbj|AK099219.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013086I05, full
           insert sequence
          Length = 1880

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 298 tgaagaacaagctaaagaaa 317
           ||||||||||||||||||||
Sbjct: 677 tgaagaacaagctaaagaaa 658
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>dbj|AK070527.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060H09, full
           insert sequence
          Length = 1950

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 298 tgaagaacaagctaaagaaa 317
           ||||||||||||||||||||
Sbjct: 677 tgaagaacaagctaaagaaa 658
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>gb|AC110562.17| Mus musculus chromosome 17, clone RP23-268M4, complete sequence
          Length = 165190

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   agtctggagcagtgggtttc 205
             ||||||||||||||||||||
Sbjct: 90201 agtctggagcagtgggtttc 90220
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>emb|BX322637.7| Zebrafish DNA sequence from clone DKEY-22A1 in linkage group 9,
             complete sequence
          Length = 178563

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    accactccgcctgctgccgc 37
             ||||||||||||||||||||
Sbjct: 27380 accactccgcctgctgccgc 27399
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>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome
          Length = 1884661

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 301     agaacaagctaaagaaaagatgga 324
               |||||||||||||||||| |||||
Sbjct: 1246312 agaacaagctaaagaaaacatgga 1246289
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>gb|AY107541.1| Zea mays PCO126911 mRNA sequence
          Length = 1353

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 175 catgaaaattcagtctggag 194
           ||||||||||||||||||||
Sbjct: 145 catgaaaattcagtctggag 164
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>gb|AF076974.1|AF076974 Homo sapiens TRRAP protein (TRRAP) mRNA, complete cds
          Length = 12563

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 320  atggagaaggccattgaaac 339
            ||||||||||||||||||||
Sbjct: 3024 atggagaaggccattgaaac 3043
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>gb|AF110377.1|AF110377 Homo sapiens PCAF-associated factor 400 (PAF400) mRNA, complete cds
          Length = 12603

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 320  atggagaaggccattgaaac 339
            ||||||||||||||||||||
Sbjct: 2944 atggagaaggccattgaaac 2963
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 66      cggcggcggcacctccgccc 85
               ||||||||||||||||||||
Sbjct: 3018524 cggcggcggcacctccgccc 3018543
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 60      cccctgcggcggcggcacct 79
               ||||||||||||||||||||
Sbjct: 2465955 cccctgcggcggcggcacct 2465974
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>gb|AC153561.5| Mus musculus 10 BAC RP23-426E11 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 228734

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 403    tgaggttgagtactatggaa 422
              ||||||||||||||||||||
Sbjct: 190185 tgaggttgagtactatggaa 190204
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 298      tgaagaacaagctaaagaaa 317
                ||||||||||||||||||||
Sbjct: 22608133 tgaagaacaagctaaagaaa 22608114
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>dbj|AB209489.1| Homo sapiens mRNA for Transformation/transcription domain-associated
            protein variant protein
          Length = 11651

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 320  atggagaaggccattgaaac 339
            ||||||||||||||||||||
Sbjct: 1959 atggagaaggccattgaaac 1978
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>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold
          Length = 2105003

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 307     agctaaagaaaagatggagaaggc 330
               |||||||||||||||| |||||||
Sbjct: 1836337 agctaaagaaaagatgcagaaggc 1836360


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,942,555
Number of Sequences: 3902068
Number of extensions: 4942555
Number of successful extensions: 94542
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94004
Number of HSP's gapped (non-prelim): 533
length of query: 483
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 461
effective length of database: 17,147,199,772
effective search space: 7904859094892
effective search space used: 7904859094892
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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