ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags19e21 |
|---|---|
| Clone Library Name | barley_pub |
>CFI_ELAUM (O65333) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 256 Score = 72.0 bits (175), Expect = 9e-13 Identities = 48/146 (32%), Positives = 67/146 (45%), Gaps = 5/146 (3%) Frame = +1 Query: 91 KPAATVEVEGIPFPREI---AGAKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEH 261 K V+VE + FP E+ +KTL L G GV IEI IKF A+GVYL+ + Sbjct: 6 KSVTEVQVESVIFPPEVKPPGSSKTLFLGGAGVRGIEIQGKFIKFTAIGVYLEDNAVPSL 65 Query: 262 LQGWKGKS--QLMEDEAFFDALVSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXX 435 WKGKS +L E FF +V+ P+EK RV I + G QY ++ + Sbjct: 66 AVKWKGKSAQELTESVEFFRDIVTGPMEKFTRVTTILPLTGQQYSEKVSENCVAAWKSLG 125 Query: 436 XXXXXXXXXXXKVSDFFQSKYFRPGS 513 K + F+ + F P + Sbjct: 126 IYSDAEAKAIEKFIEIFKDQTFPPAA 151
>CFI_IPOPU (O22604) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 241 Score = 69.7 bits (169), Expect = 5e-12 Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 5/147 (3%) Frame = +1 Query: 100 ATVEVEGIPFPREI---AGAKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQG 270 A V+VE FP + AKTL L G G + I +KF A+GVYL+ D Sbjct: 8 AEVKVESYVFPATVKPPGTAKTLILGGAGARGLNIDGKFVKFTAIGVYLEADAVPSLAVK 67 Query: 271 WKGKS--QLMEDEAFFDALVSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXX 444 W GKS +L + FF +V+ P EK+ R+ +I + G QY ++ + Sbjct: 68 WNGKSVEELTDSVQFFRDIVTGPFEKLTRITMILPLSGKQYSEKVTENCVAFWKAAGMYG 127 Query: 445 XXXXXXXXKVSDFFQSKYFRPGSIVTF 525 K +D F + F PG+ + F Sbjct: 128 DAESKAIDKFNDVFSDQMFPPGASIFF 154
>CFIA_PETHY (P11650) Chalcone--flavonone isomerase A (EC 5.5.1.6) (Chalcone| isomerase A) Length = 241 Score = 62.0 bits (149), Expect = 1e-09 Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 2/136 (1%) Frame = +1 Query: 124 PFPREIAGAKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQGWKGKS--QLME 297 P TL L G G +EI +KF A+GVYL+ + WKGK+ +L + Sbjct: 19 PTVNPAGSTNTLFLAGAGHRGLEIEGKFVKFTAIGVYLEESAIPFLAEKWKGKTPQELTD 78 Query: 298 DEAFFDALVSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXXXXXXXXXXKVS 477 FF +V+ P EK RV +I + G QY ++ + K Sbjct: 79 SVEFFRDVVTGPFEKFTRVTMILPLTGKQYSEKVAENCVAHWKGIGTYTDDEGRAIEKFL 138 Query: 478 DFFQSKYFRPGSIVTF 525 D F+S+ F PG+ + F Sbjct: 139 DVFRSETFPPGASIMF 154
>CFIB_PETHY (P11651) Chalcone--flavonone isomerase B (EC 5.5.1.6) (Chalcone| isomerase B) Length = 220 Score = 59.7 bits (143), Expect = 5e-09 Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 5/145 (3%) Frame = +1 Query: 106 VEVEGIPFPREI---AGAKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQGWK 276 V+VE FP + A KTL L G G +++ +KF +GVYL+ WK Sbjct: 10 VQVENYVFPPTVKPPASTKTLFLGGAGHRGLDVEGKFVKFTVIGVYLEESAVQFLAPKWK 69 Query: 277 GKS--QLMEDEAFFDALVSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXXXX 450 GKS +L+ FF +V+ P EK RV I + G Q+ ++ + Sbjct: 70 GKSAEELIHSVDFFRDIVTGPFEKFTRVRFILPLTGKQFSEKVAENCVAHWKATGTYSDA 129 Query: 451 XXXXXXKVSDFFQSKYFRPGSIVTF 525 K + +S+ F PG+ + F Sbjct: 130 GSRAIEKFLNVVKSETFLPGASILF 154
>CFI_DIACA (Q43754) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 221 Score = 59.7 bits (143), Expect = 5e-09 Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 5/145 (3%) Frame = +1 Query: 106 VEVEGIPFPREI---AGAKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQGWK 276 ++VE FP E+ KT L G GV +EI IKF A+ VY++ D WK Sbjct: 7 IQVESHVFPPEVKPPGSDKTFFLGGAGVRGLEIQGKFIKFTAIAVYIEDDAVSSLAVKWK 66 Query: 277 GKS--QLMEDEAFFDALVSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXXXX 450 GK+ +L + FF +V+ P EK +V +I + G QY ++ + Sbjct: 67 GKTADELTDSVDFFKDIVTGPFEKFTQVTMILPLTGQQYSEKVVENCVAHWKSVGTYTDA 126 Query: 451 XXXXXXKVSDFFQSKYFRPGSIVTF 525 K F++ PG+ + F Sbjct: 127 ESEATQKFLQVFKNVSNPPGASILF 151
>CFI_VITVI (P51117) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 234 Score = 59.3 bits (142), Expect = 6e-09 Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 6/150 (4%) Frame = +1 Query: 94 PAAT-VEVEGIPFPREI---AGAKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEH 261 P+ T V+VE + FP + L L G GV +EI +KF A+GVYL+ Sbjct: 5 PSVTAVQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLENSAVPTL 64 Query: 262 LQGWKGKS--QLMEDEAFFDALVSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXX 435 WKGK+ +L + FF +V+ P EK +V I + G QY ++ + Sbjct: 65 AVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVG 124 Query: 436 XXXXXXXXXXXKVSDFFQSKYFRPGSIVTF 525 K ++ + + F PG+ + F Sbjct: 125 IYTDAEAKAIEKFNEVLKDETFPPGNSILF 154
>CFI1_MEDSA (P28012) Chalcone--flavonone isomerase 1 (EC 5.5.1.6) (Chalcone| isomerase 1) Length = 222 Score = 58.9 bits (141), Expect = 8e-09 Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 5/145 (3%) Frame = +1 Query: 106 VEVEGIPFPREIAG---AKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQGWK 276 + VE + +P + K+ L G G + I IKF A+GVYL+ WK Sbjct: 8 ITVENLEYPAVVTSPVTGKSYFLGGAGERGLTIEGNFIKFTAIGVYLEDIAVASLAAKWK 67 Query: 277 GKS--QLMEDEAFFDALVSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXXXX 450 GKS +L+E F+ ++S P EK++R I+E+ G +Y ++ + L Sbjct: 68 GKSSEELLETLDFYRDIISGPFEKLIRGSKIRELSGPEYSRKVMENCVAHLKSVGTYGDA 127 Query: 451 XXXXXXKVSDFFQSKYFRPGSIVTF 525 K ++ F+ F PG+ V + Sbjct: 128 EAEAMQKFAEAFKPVNFPPGASVFY 152
>CFI_PUELO (Q43056) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 224 Score = 58.5 bits (140), Expect = 1e-08 Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 5/147 (3%) Frame = +1 Query: 100 ATVEVEGIPFPREI---AGAKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQG 270 + V+VE + FP + A +T L G G + I IKF +GVYL+ Sbjct: 11 SAVQVEFLEFPAVVTSPASGRTYFLGGAGERGLTIEGKFIKFTGIGVYLEDKAVSSLAAK 70 Query: 271 WKGK--SQLMEDEAFFDALVSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXX 444 WKGK +L+E F+ ++S P EK++R I + G +Y ++ + + Sbjct: 71 WKGKPSEELVETLDFYRDIISGPFEKLIRGSKILPLSGVEYSKKVMENCVAHMKSVGTYG 130 Query: 445 XXXXXXXXKVSDFFQSKYFRPGSIVTF 525 K ++ F++ F+PG+ V + Sbjct: 131 DAEAAAIEKFAEAFKNVNFQPGATVFY 157
>CFI_PHAVU (P14298) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 221 Score = 57.8 bits (138), Expect = 2e-08 Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 5/145 (3%) Frame = +1 Query: 106 VEVEGIPFPREI---AGAKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQGWK 276 V+VE + FP + A AKT L G G + I IKF A+GVYL+ WK Sbjct: 10 VQVEFLHFPAVVTSPATAKTYFLGGAGERGLTIEGKFIKFTAIGVYLEDKAVASLATKWK 69 Query: 277 GK--SQLMEDEAFFDALVSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXXXX 450 GK +L+ F+ ++S P EK++R I ++ G++Y ++ + L Sbjct: 70 GKPSEELINTLDFYRDIISGPFEKLIRGSKILQLSGTEYSRKVMENCVAHLKSVGTYGDA 129 Query: 451 XXXXXXKVSDFFQSKYFRPGSIVTF 525 + ++ F+ F PG+ V + Sbjct: 130 EAKGIEEFAEAFKKVNFPPGASVFY 154
>CFI_CALCH (Q42663) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) (Fragment) Length = 237 Score = 56.2 bits (134), Expect = 5e-08 Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 6/146 (4%) Frame = +1 Query: 106 VEVEGIPFPREI---AGAKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQG-W 273 ++VE I FP + +L L G GV +EI +KF +GVYL+ D A+ L Sbjct: 10 LQVESIVFPSSVKPPGSTNSLFLGGAGVRGMEIQGNFVKFTGIGVYLE-DKAIPLLAAKR 68 Query: 274 KGK--SQLMEDEAFFDALVSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXXX 447 KGK ++L++ FF +V+ P EK +V +I + G QY ++ Sbjct: 69 KGKTVAELLDSVEFFRDIVTGPFEKFTQVTMILPLTGKQYSEKVSEMCVGVWKALGTYTD 128 Query: 448 XXXXXXXKVSDFFQSKYFRPGSIVTF 525 K + F+ + F PGS + F Sbjct: 129 ADGTTIEKFLEVFKDENFLPGSSILF 154
>CFI2_MEDSA (P28013) Chalcone--flavonone isomerase 2 (EC 5.5.1.6) (Chalcone| isomerase 2) (Fragment) Length = 197 Score = 55.8 bits (133), Expect = 7e-08 Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 2/127 (1%) Frame = +1 Query: 151 KTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQGWKGKS--QLMEDEAFFDALV 324 K+ L G G + I IKF A+GVYL+ WKGKS +L+E F+ ++ Sbjct: 1 KSYFLGGAGERGLTIEGNFIKFTAIGVYLEDIAVASLAAKWKGKSSEELLETLDFYRDII 60 Query: 325 SAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXXXXXXXXXXKVSDFFQSKYFR 504 S P EK++R I+E+ G +Y ++ + L K ++ F+ F Sbjct: 61 SGPFEKLIRGSKIRELSGPEYSRKVMENCVAHLKSVGTYGDAEAEAMQKFAEAFKPVNFP 120 Query: 505 PGSIVTF 525 PG+ V + Sbjct: 121 PGASVFY 127
>CFI_MAIZE (Q08704) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 231 Score = 55.5 bits (132), Expect = 9e-08 Identities = 40/136 (29%), Positives = 58/136 (42%), Gaps = 2/136 (1%) Frame = +1 Query: 124 PFPREIAGAKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQGWKGKS--QLME 297 P R A + L G GV +EI IKF A+GVYL+ + W GK+ +L Sbjct: 15 PVARPPGSAGSHFLGGAGVRGVEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELAS 74 Query: 298 DEAFFDALVSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXXXXXXXXXXKVS 477 D AFF +V+ EK RV +I + G QY ++ + K Sbjct: 75 DAAFFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWKAAGLYTDAEGVAVEKFR 134 Query: 478 DFFQSKYFRPGSIVTF 525 + F+ + F PG + F Sbjct: 135 EVFKPETFAPGRSILF 150
>CFI_RAPSA (O22651) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 247 Score = 54.3 bits (129), Expect = 2e-07 Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 5/148 (3%) Frame = +1 Query: 97 AATVEVEGIPFPREI---AGAKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQ 267 A ++V+ + FP + A + TL L G GV +EI + F +GVYLD Sbjct: 13 APKLQVDSVTFPPSVISPASSNTLFLGGAGVRGLEIQGKFVIFTVIGVYLDPVSVPSLSV 72 Query: 268 GWKGKS--QLMEDEAFFDALVSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXX 441 W+GK+ +L E FF +V EK ++V + + G QY ++ + Sbjct: 73 KWEGKTTEELTESVPFFREIVIGAFEKFIKVTMKLPLTGQQYSEKVTENCVAIWKSLGIY 132 Query: 442 XXXXXXXXXKVSDFFQSKYFRPGSIVTF 525 + + F+ + F PG+ + F Sbjct: 133 TDSEAKAVERFLEVFKDETFPPGASILF 160
>CHI_ARALP (Q9LKC3) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 244 Score = 52.0 bits (123), Expect = 1e-06 Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 6/150 (4%) Frame = +1 Query: 94 PAAT-VEVEGIPFPREI---AGAKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEH 261 P+ T ++V+ + F + A + L L G GV ++I + F +GVYL+ + Sbjct: 12 PSVTKLQVDSVTFDPSVKSPASSNPLFLGGAGVRGLDIQGKFVIFTVIGVYLESNAVPSL 71 Query: 262 LQGWKGKS--QLMEDEAFFDALVSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXX 435 WKGK+ +L E FF +V+ EK ++V + + G QY ++ + Sbjct: 72 SVKWKGKTTEELSESVPFFREIVTGAFEKFIKVTMKLPLTGQQYSEKVTENCVAIWKSLG 131 Query: 436 XXXXXXXXXXXKVSDFFQSKYFRPGSIVTF 525 K + F+ + F PGS + F Sbjct: 132 IYTDCEAKAVEKFLEIFKEETFPPGSSILF 161
>CFI_ARATH (P41088) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) (TRANSPARENT TESTA 5 protein) Length = 246 Score = 51.2 bits (121), Expect = 2e-06 Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 2/137 (1%) Frame = +1 Query: 121 IPFPREIAGAKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQGWKGKS--QLM 294 +P + A + L L G GV ++I + F +GVYL+ + WKGK+ +L Sbjct: 27 VPSVKSPASSNPLFLGGAGVRGLDIQGKFVIFTVIGVYLEGNAVPSLSVKWKGKTTEELT 86 Query: 295 EDEAFFDALVSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXXXXXXXXXXKV 474 E FF +V+ EK ++V + + G QY ++ + K Sbjct: 87 ESIPFFREIVTGAFEKFIKVTMKLPLTGQQYSEKVTENCVAIWKQLGLYTDCEAKAVEKF 146 Query: 475 SDFFQSKYFRPGSIVTF 525 + F+ + F PGS + F Sbjct: 147 LEIFKEETFPPGSSILF 163
>CFI_PEA (P41089) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 223 Score = 48.1 bits (113), Expect = 1e-05 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 4/91 (4%) Frame = +1 Query: 127 FPREIAGAKT---LSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQGWKGK-SQLM 294 FP + T + L G G + I+ IKF +GVYL+ W+GK +L+ Sbjct: 17 FPAVVTSPVTENHIFLGGAGERGLTINGTFIKFTCIGVYLEDKADKSLATKWEGKLEELL 76 Query: 295 EDEAFFDALVSAPVEKVLRVVVIKEIKGSQY 387 E F+ ++S P EK++R IKE+ G +Y Sbjct: 77 ETLDFYRDIISGPFEKLIRRSKIKELSGPEY 107
>CFI_SOYBN (O81980) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) (Fragment) Length = 172 Score = 41.2 bits (95), Expect = 0.002 Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 2/106 (1%) Frame = +1 Query: 214 FNAVGVYLDVDGAMEHLQGWKGKS--QLMEDEAFFDALVSAPVEKVLRVVVIKEIKGSQY 387 + +GVYL+ WKGK+ +L+ F+ ++S P EK++R I + G++Y Sbjct: 1 YTGIGVYLEDKAVPSLAAKWKGKTSEELVHTLHFYRDIISGPFEKLIRGSKILPLAGAEY 60 Query: 388 GVQLESSVRDRLVXXXXXXXXXXXXXXKVSDFFQSKYFRPGSIVTF 525 ++ + + K ++ F++ F PG + + Sbjct: 61 SKKVMENCVAHMKSVGTYGDAEAAAIEKFAEAFKNVNFAPGPLFLY 106
>RACD_DICDI (P34150) RAS-related protein racD| Length = 254 Score = 30.4 bits (67), Expect = 3.2 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 3/60 (5%) Frame = +1 Query: 61 KKTMGSEQEKKPAATVEVEGIPFPREIAGAKTL---SLVGHGVTDIEIHFLQIKFNAVGV 231 KKT+ QE K EG+ +EI + +L G+GV DI ++ FN V Sbjct: 128 KKTLSQLQESKQEPVSRDEGVALAKEIGAVQFFECSALTGNGVNDIFAAAIKAAFNKPAV 187
>IF2_TREDE (Q73NP6) Translation initiation factor IF-2| Length = 896 Score = 30.0 bits (66), Expect = 4.1 Identities = 11/32 (34%), Positives = 21/32 (65%) Frame = -2 Query: 100 RPASSPAPIPLFSCRGQDSREERETKKELMER 5 RP ++PAPIP+ + Q +++ + KKE+ + Sbjct: 236 RPGAAPAPIPVEKNKAQTNKKAHKAKKEIYNK 267
>CNGB1_HUMAN (Q14028) Cyclic nucleotide-gated cation channel 4 (CNG channel 4)| (CNG-4) (CNG4) (Cyclic nucleotide-gated cation channel modulatory subunit) Length = 909 Score = 29.6 bits (65), Expect = 5.4 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = -2 Query: 136 PAGTECPPLPLWRPASSPAPIPLFSCRGQD 47 P PP P P SSP P L SC G++ Sbjct: 841 PPAPRTPPEPPGSPPSSPPPASLGSCEGEE 870
>LEXA_AGRT5 (Q8UFK2) LexA repressor (EC 3.4.21.88)| Length = 240 Score = 29.6 bits (65), Expect = 5.4 Identities = 22/83 (26%), Positives = 39/83 (46%) Frame = +1 Query: 67 TMGSEQEKKPAATVEVEGIPFPREIAGAKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVD 246 ++G +E +PA V+ F AGA T+ ++G + I +Q + + V +D+ Sbjct: 91 SLGKPKEPEPAPAVKAPANDF----AGAATIPVMGRIAAGVPISAIQNNTHDLAVPVDML 146 Query: 247 GAMEHLQGWKGKSQLMEDEAFFD 315 G+ EH + K M + FD Sbjct: 147 GSGEH-YALEVKGDSMIEAGIFD 168
>TRRAP_HUMAN (Q9Y4A5) Transformation/transcription domain-associated protein| (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog) Length = 3859 Score = 29.6 bits (65), Expect = 5.4 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -2 Query: 136 PAGTECPPLPLWRPASSPAPIPLFSCRGQDSREERET 26 PA PP P +PAP+P F +G+ +E+++T Sbjct: 504 PAPPPPPPPPPPATPVTPAPVPPFEKQGEKDKEDKQT 540
>LRCH4_HUMAN (O75427) Leucine-rich repeats and calponin homology| domain-containing protein 4 (Leucine-rich neuronal protein) Length = 683 Score = 29.3 bits (64), Expect = 7.1 Identities = 17/52 (32%), Positives = 22/52 (42%) Frame = -2 Query: 199 NGSQCPXXXXXXXXXXXXXRFPAGTECPPLPLWRPASSPAPIPLFSCRGQDS 44 NGS PA PLP+ PA++PAP PL S + +S Sbjct: 455 NGSPKSSASQAGAAAGQGAPAPAPASQEPLPIAGPATAPAPRPLGSIQRPNS 506
>AB1IP_HUMAN (Q7Z5R6) Amyloid beta A4 precursor protein-binding family B member| 1-interacting protein (APBB1-interacting protein 1) (Rap1-GTP-interacting adapter molecule) (RIAM) (Proline-rich EVH1 ligand 1) (PREL-1) (Proline-rich protein 73) (Retinoic ac Length = 666 Score = 28.9 bits (63), Expect = 9.2 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = -2 Query: 133 AGTECPPLPLWRPASSPAPIP 71 AG+E PP P PA +PAP+P Sbjct: 594 AGSELPPPPPPPPAPAPAPVP 614
>IPUA_ASPNG (O00105) Isopullulanase precursor (EC 3.2.1.57)| Length = 564 Score = 28.9 bits (63), Expect = 9.2 Identities = 19/56 (33%), Positives = 28/56 (50%) Frame = -1 Query: 257 SMAPSTSR*TPTALNLI*RKWISMSVTPWPTSESVLAPAISRGNGMPSTSTVAAGF 90 S+APS +R AL + + + S P P S + +APA R G+ +TS F Sbjct: 164 SLAPSGARQPENALLIFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVF 219
>COA4_TTV1 (P19273) Coat protein TP4| Length = 219 Score = 28.9 bits (63), Expect = 9.2 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = +1 Query: 220 AVGVYLDVDGAMEHLQGWKGKSQLME-DEAFFDALVSAPV 336 +VGV + DG L GW G Q +E D+ +D +PV Sbjct: 12 SVGVAIGPDGIYRALYGWYGNEQPLEIDKCSYDLSTCSPV 51
>DZIP3_HUMAN (Q86Y13) Ubiquitin ligase protein DZIP3 (EC 6.3.2.-) (DAZ-interacting| protein 3) (RNA-binding ubiquitin ligase of 138 kDa) (hRUL138) Length = 1208 Score = 28.9 bits (63), Expect = 9.2 Identities = 12/30 (40%), Positives = 13/30 (43%) Frame = -2 Query: 118 PPLPLWRPASSPAPIPLFSCRGQDSREERE 29 PP P WRP +S P D EE E Sbjct: 1116 PPKPAWRPLTSQGPATWEGASNPDEEEEEE 1145 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,375,904 Number of Sequences: 219361 Number of extensions: 817885 Number of successful extensions: 3272 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 3128 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3261 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4085413911 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
