ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags18p12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476340.1| Oryza sativa (japonica cultivar-group), mRNA 210 5e-51
2ref|XM_506126.1| PREDICTED Oryza sativa (japonica cultivar-group... 210 5e-51
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 210 5e-51
4dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic D... 210 5e-51
5dbj|AK103198.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 5e-51
6dbj|AK101821.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 5e-51
7dbj|AK067928.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 5e-51
8dbj|AK066470.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 5e-51
9gb|BT018172.1| Zea mays clone EL01N0557B07.c mRNA sequence 74 7e-10
10dbj|AP008222.1| Oryza sativa (japonica cultivar-group) genomic D... 68 4e-08
11dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome 44 0.61
12gb|AC005066.1|AC005066 Homo sapiens BAC clone CTB-118P15 from 8q... 44 0.61
13gb|AC079199.9| Homo sapiens chromosome 17, clone RP11-94L15, com... 42 2.4
14gb|AC024218.17| Homo sapiens 3 BAC RP11-668N23 (Roswell Park Can... 42 2.4
15emb|BX248391.22| Zebrafish DNA sequence from clone CH211-212M14 ... 42 2.4
16emb|BX539349.17| Zebrafish DNA sequence from clone DKEY-74L17 in... 42 2.4
17gb|AC113416.2| Homo sapiens chromosome 5 clone RP11-560F8, compl... 42 2.4
18gb|AC017032.3|AC017032 Homo sapiens BAC clone RP11-292E8 from Y,... 42 2.4
19gb|U29952.1|LMU29952 Leishmania major infective insect stage-spe... 42 2.4
20gb|AC159810.2| Mus musculus BAC clone RP24-94A19 from chromosome... 40 9.5
21gb|AC073600.3| Genomic sequence for Mus musculus, clone RP23-119... 40 9.5
22emb|AL356100.8| Human DNA sequence from clone RP11-359H22 on chr... 40 9.5
23emb|AL158838.12| Human DNA sequence from clone RP11-161I10 on ch... 40 9.5
24emb|AL022319.2|HS172B20 Human DNA sequence from clone RP1-172B20... 40 9.5
25emb|AL022150.2|HS198G23 Human DNA sequence from clone RP1-198G23... 40 9.5
26gb|AC160537.6| Mus musculus chromosome 8, clone RP24-95H19, comp... 40 9.5
27gb|AC183387.3| Pan troglodytes BAC clone CH251-113M12 from chrom... 40 9.5
28gb|AE011862.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 9.5
29gb|AC011841.7| Homo sapiens chromosome 17, clone RP11-272E10, co... 40 9.5
30gb|AC012325.9| Homo sapiens chromosome 16 clone RP11-93H5, compl... 40 9.5
31gb|AC132186.3| Homo sapiens chromosome 16 clone CTD-2258A20, com... 40 9.5
32dbj|AP001858.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 9.5
33emb|AL683877.10| Mouse DNA sequence from clone RP23-120P2 on chr... 40 9.5
34emb|AL732513.8| Mouse DNA sequence from clone RP23-344B24 on chr... 40 9.5
35gb|AC102210.6| Mus musculus chromosome 8, clone RP24-351F4, comp... 40 9.5
36gb|AC163629.5| Mus musculus BAC clone RP24-542G7 from chromosome... 40 9.5
37gb|AC112493.2| Homo sapiens X BAC RP11-2M5 (Roswell Park Cancer ... 40 9.5 
>ref|XM_476340.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2071

 Score =  210 bits (106), Expect = 5e-51
 Identities = 163/182 (89%)
 Strand = Plus / Plus

                                                                       
Query: 115 ctagacctgcctctttcatttcccttgctgccatctctttatccttttgcgactcaatgt 174
           |||||| |||||||||||||||||||| |||||||||| | |||| |||||||||||| |
Sbjct: 797 ctagacttgcctctttcatttcccttgttgccatctctgtttcctcttgcgactcaatat 856

                                                                       
Query: 175 ccactccctgagggttcttcagagaatccatttaagccttactattgctggtgtccgcca 234
           ||||| ||| ||| |||| ||||| | |||||||||||||||||||||||||| || |||
Sbjct: 857 ccacttcctaaggattctacagagcaaccatttaagccttactattgctggtgcccacca 916

                                                                       
Query: 235 tgcccatcgtcactgcagtacagtgtaaccccactgcacatgccagtttcatctgtagaa 294
           |||||||| || |||||||||||||||||||| ||||| ||||||||| |||||||||||
Sbjct: 917 tgcccatcttctctgcagtacagtgtaacccctctgcatatgccagttacatctgtagaa 976

             
Query: 295 cc 296
           ||
Sbjct: 977 cc 978



 Score =  147 bits (74), Expect = 6e-32
 Identities = 122/138 (88%)
 Strand = Plus / Plus

                                                                        
Query: 552  tcctttgcttcacctgccacttcctacttcaccatttgtttcattgcatagctcacaggt 611
            |||||| ||||||||||| ||||||||||||||| |||| || |||||| | ||||| ||
Sbjct: 1099 tcctttacttcacctgccgcttcctacttcaccacttgtatccttgcatggttcacaagt 1158

                                                                        
Query: 612  ttcaacatttacaccattgatgtctgatcctattgtgcatgtcccagtcatcgatatgtg 671
            | ||||||| ||||||||||||||||| || |||||||||||||| ||||| ||| ||||
Sbjct: 1159 tccaacattcacaccattgatgtctgaccccattgtgcatgtcccggtcattgatgtgtg 1218

                              
Query: 672  ttcctctggtcaggctta 689
            ||||||||| ||||||||
Sbjct: 1219 ttcctctggccaggctta 1236



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                        
Query: 356  tttctgcaaagttggatacaaataattcaccatcacttaatcttccatcgatactgcatg 415
            ||||||||||| ||||||||| | ||   || ||||||||||||||||||||||||| ||
Sbjct: 1038 tttctgcaaagatggatacaactgatctcccgtcacttaatcttccatcgatactgcgtg 1097

                                            
Query: 416  atccttcgcttcacctcccgcttcctacttca 447
            ||||||  |||||||| |||||||||||||||
Sbjct: 1098 atcctttacttcacctgccgcttcctacttca 1129
to top
>ref|XM_506126.1| PREDICTED Oryza sativa (japonica cultivar-group), B1026C12.9 mRNA
          Length = 2333

 Score =  210 bits (106), Expect = 5e-51
 Identities = 163/182 (89%)
 Strand = Plus / Plus

                                                                        
Query: 115  ctagacctgcctctttcatttcccttgctgccatctctttatccttttgcgactcaatgt 174
            |||||| |||||||||||||||||||| |||||||||| | |||| |||||||||||| |
Sbjct: 1290 ctagacttgcctctttcatttcccttgttgccatctctgtttcctcttgcgactcaatat 1349

                                                                        
Query: 175  ccactccctgagggttcttcagagaatccatttaagccttactattgctggtgtccgcca 234
            ||||| ||| ||| |||| ||||| | |||||||||||||||||||||||||| || |||
Sbjct: 1350 ccacttcctaaggattctacagagcaaccatttaagccttactattgctggtgcccacca 1409

                                                                        
Query: 235  tgcccatcgtcactgcagtacagtgtaaccccactgcacatgccagtttcatctgtagaa 294
            |||||||| || |||||||||||||||||||| ||||| ||||||||| |||||||||||
Sbjct: 1410 tgcccatcttctctgcagtacagtgtaacccctctgcatatgccagttacatctgtagaa 1469

              
Query: 295  cc 296
            ||
Sbjct: 1470 cc 1471



 Score =  147 bits (74), Expect = 6e-32
 Identities = 122/138 (88%)
 Strand = Plus / Plus

                                                                        
Query: 552  tcctttgcttcacctgccacttcctacttcaccatttgtttcattgcatagctcacaggt 611
            |||||| ||||||||||| ||||||||||||||| |||| || |||||| | ||||| ||
Sbjct: 1592 tcctttacttcacctgccgcttcctacttcaccacttgtatccttgcatggttcacaagt 1651

                                                                        
Query: 612  ttcaacatttacaccattgatgtctgatcctattgtgcatgtcccagtcatcgatatgtg 671
            | ||||||| ||||||||||||||||| || |||||||||||||| ||||| ||| ||||
Sbjct: 1652 tccaacattcacaccattgatgtctgaccccattgtgcatgtcccggtcattgatgtgtg 1711

                              
Query: 672  ttcctctggtcaggctta 689
            ||||||||| ||||||||
Sbjct: 1712 ttcctctggccaggctta 1729



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                        
Query: 356  tttctgcaaagttggatacaaataattcaccatcacttaatcttccatcgatactgcatg 415
            ||||||||||| ||||||||| | ||   || ||||||||||||||||||||||||| ||
Sbjct: 1531 tttctgcaaagatggatacaactgatctcccgtcacttaatcttccatcgatactgcgtg 1590

                                            
Query: 416  atccttcgcttcacctcccgcttcctacttca 447
            ||||||  |||||||| |||||||||||||||
Sbjct: 1591 atcctttacttcacctgccgcttcctacttca 1622
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
             complete sequence
          Length = 29644043

 Score =  210 bits (106), Expect = 5e-51
 Identities = 163/182 (89%)
 Strand = Plus / Plus

                                                                         
Query: 115   ctagacctgcctctttcatttcccttgctgccatctctttatccttttgcgactcaatgt 174
             |||||| |||||||||||||||||||| |||||||||| | |||| |||||||||||| |
Sbjct: 39937 ctagacttgcctctttcatttcccttgttgccatctctgtttcctcttgcgactcaatat 39996

                                                                         
Query: 175   ccactccctgagggttcttcagagaatccatttaagccttactattgctggtgtccgcca 234
             ||||| ||| ||| |||| ||||| | |||||||||||||||||||||||||| || |||
Sbjct: 39997 ccacttcctaaggattctacagagcaaccatttaagccttactattgctggtgcccacca 40056

                                                                         
Query: 235   tgcccatcgtcactgcagtacagtgtaaccccactgcacatgccagtttcatctgtagaa 294
             |||||||| || |||||||||||||||||||| ||||| ||||||||| |||||||||||
Sbjct: 40057 tgcccatcttctctgcagtacagtgtaacccctctgcatatgccagttacatctgtagaa 40116

               
Query: 295   cc 296
             ||
Sbjct: 40117 cc 40118



 Score =  147 bits (74), Expect = 6e-32
 Identities = 122/138 (88%)
 Strand = Plus / Plus

                                                                         
Query: 552   tcctttgcttcacctgccacttcctacttcaccatttgtttcattgcatagctcacaggt 611
             |||||| ||||||||||| ||||||||||||||| |||| || |||||| | ||||| ||
Sbjct: 40239 tcctttacttcacctgccgcttcctacttcaccacttgtatccttgcatggttcacaagt 40298

                                                                         
Query: 612   ttcaacatttacaccattgatgtctgatcctattgtgcatgtcccagtcatcgatatgtg 671
             | ||||||| ||||||||||||||||| || |||||||||||||| ||||| ||| ||||
Sbjct: 40299 tccaacattcacaccattgatgtctgaccccattgtgcatgtcccggtcattgatgtgtg 40358

                               
Query: 672   ttcctctggtcaggctta 689
             ||||||||| ||||||||
Sbjct: 40359 ttcctctggccaggctta 40376



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                         
Query: 356   tttctgcaaagttggatacaaataattcaccatcacttaatcttccatcgatactgcatg 415
             ||||||||||| ||||||||| | ||   || ||||||||||||||||||||||||| ||
Sbjct: 40178 tttctgcaaagatggatacaactgatctcccgtcacttaatcttccatcgatactgcgtg 40237

                                             
Query: 416   atccttcgcttcacctcccgcttcctacttca 447
             ||||||  |||||||| |||||||||||||||
Sbjct: 40238 atcctttacttcacctgccgcttcctacttca 40269
to top
>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1026C12
          Length = 170240

 Score =  210 bits (106), Expect = 5e-51
 Identities = 163/182 (89%)
 Strand = Plus / Plus

                                                                         
Query: 115   ctagacctgcctctttcatttcccttgctgccatctctttatccttttgcgactcaatgt 174
             |||||| |||||||||||||||||||| |||||||||| | |||| |||||||||||| |
Sbjct: 39236 ctagacttgcctctttcatttcccttgttgccatctctgtttcctcttgcgactcaatat 39295

                                                                         
Query: 175   ccactccctgagggttcttcagagaatccatttaagccttactattgctggtgtccgcca 234
             ||||| ||| ||| |||| ||||| | |||||||||||||||||||||||||| || |||
Sbjct: 39296 ccacttcctaaggattctacagagcaaccatttaagccttactattgctggtgcccacca 39355

                                                                         
Query: 235   tgcccatcgtcactgcagtacagtgtaaccccactgcacatgccagtttcatctgtagaa 294
             |||||||| || |||||||||||||||||||| ||||| ||||||||| |||||||||||
Sbjct: 39356 tgcccatcttctctgcagtacagtgtaacccctctgcatatgccagttacatctgtagaa 39415

               
Query: 295   cc 296
             ||
Sbjct: 39416 cc 39417



 Score =  147 bits (74), Expect = 6e-32
 Identities = 122/138 (88%)
 Strand = Plus / Plus

                                                                         
Query: 552   tcctttgcttcacctgccacttcctacttcaccatttgtttcattgcatagctcacaggt 611
             |||||| ||||||||||| ||||||||||||||| |||| || |||||| | ||||| ||
Sbjct: 39538 tcctttacttcacctgccgcttcctacttcaccacttgtatccttgcatggttcacaagt 39597

                                                                         
Query: 612   ttcaacatttacaccattgatgtctgatcctattgtgcatgtcccagtcatcgatatgtg 671
             | ||||||| ||||||||||||||||| || |||||||||||||| ||||| ||| ||||
Sbjct: 39598 tccaacattcacaccattgatgtctgaccccattgtgcatgtcccggtcattgatgtgtg 39657

                               
Query: 672   ttcctctggtcaggctta 689
             ||||||||| ||||||||
Sbjct: 39658 ttcctctggccaggctta 39675



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                         
Query: 356   tttctgcaaagttggatacaaataattcaccatcacttaatcttccatcgatactgcatg 415
             ||||||||||| ||||||||| | ||   || ||||||||||||||||||||||||| ||
Sbjct: 39477 tttctgcaaagatggatacaactgatctcccgtcacttaatcttccatcgatactgcgtg 39536

                                             
Query: 416   atccttcgcttcacctcccgcttcctacttca 447
             ||||||  |||||||| |||||||||||||||
Sbjct: 39537 atcctttacttcacctgccgcttcctacttca 39568
to top
>dbj|AK103198.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122A05, full
            insert sequence
          Length = 2625

 Score =  210 bits (106), Expect = 5e-51
 Identities = 163/182 (89%)
 Strand = Plus / Plus

                                                                        
Query: 115  ctagacctgcctctttcatttcccttgctgccatctctttatccttttgcgactcaatgt 174
            |||||| |||||||||||||||||||| |||||||||| | |||| |||||||||||| |
Sbjct: 1563 ctagacttgcctctttcatttcccttgttgccatctctgtttcctcttgcgactcaatat 1622

                                                                        
Query: 175  ccactccctgagggttcttcagagaatccatttaagccttactattgctggtgtccgcca 234
            ||||| ||| ||| |||| ||||| | |||||||||||||||||||||||||| || |||
Sbjct: 1623 ccacttcctaaggattctacagagcaaccatttaagccttactattgctggtgcccacca 1682

                                                                        
Query: 235  tgcccatcgtcactgcagtacagtgtaaccccactgcacatgccagtttcatctgtagaa 294
            |||||||| || |||||||||||||||||||| ||||| ||||||||| |||||||||||
Sbjct: 1683 tgcccatcttctctgcagtacagtgtaacccctctgcatatgccagttacatctgtagaa 1742

              
Query: 295  cc 296
            ||
Sbjct: 1743 cc 1744



 Score =  147 bits (74), Expect = 6e-32
 Identities = 122/138 (88%)
 Strand = Plus / Plus

                                                                        
Query: 552  tcctttgcttcacctgccacttcctacttcaccatttgtttcattgcatagctcacaggt 611
            |||||| ||||||||||| ||||||||||||||| |||| || |||||| | ||||| ||
Sbjct: 1865 tcctttacttcacctgccgcttcctacttcaccacttgtatccttgcatggttcacaagt 1924

                                                                        
Query: 612  ttcaacatttacaccattgatgtctgatcctattgtgcatgtcccagtcatcgatatgtg 671
            | ||||||| ||||||||||||||||| || |||||||||||||| ||||| ||| ||||
Sbjct: 1925 tccaacattcacaccattgatgtctgaccccattgtgcatgtcccggtcattgatgtgtg 1984

                              
Query: 672  ttcctctggtcaggctta 689
            ||||||||| ||||||||
Sbjct: 1985 ttcctctggccaggctta 2002



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                        
Query: 356  tttctgcaaagttggatacaaataattcaccatcacttaatcttccatcgatactgcatg 415
            ||||||||||| ||||||||| | ||   || ||||||||||||||||||||||||| ||
Sbjct: 1804 tttctgcaaagatggatacaactgatctcccgtcacttaatcttccatcgatactgcgtg 1863

                                            
Query: 416  atccttcgcttcacctcccgcttcctacttca 447
            ||||||  |||||||| |||||||||||||||
Sbjct: 1864 atcctttacttcacctgccgcttcctacttca 1895
to top
>dbj|AK101821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067G13, full
            insert sequence
          Length = 2879

 Score =  210 bits (106), Expect = 5e-51
 Identities = 163/182 (89%)
 Strand = Plus / Plus

                                                                        
Query: 115  ctagacctgcctctttcatttcccttgctgccatctctttatccttttgcgactcaatgt 174
            |||||| |||||||||||||||||||| |||||||||| | |||| |||||||||||| |
Sbjct: 1827 ctagacttgcctctttcatttcccttgttgccatctctgtttcctcttgcgactcaatat 1886

                                                                        
Query: 175  ccactccctgagggttcttcagagaatccatttaagccttactattgctggtgtccgcca 234
            ||||| ||| ||| |||| ||||| | |||||||||||||||||||||||||| || |||
Sbjct: 1887 ccacttcctaaggattctacagagcaaccatttaagccttactattgctggtgcccacca 1946

                                                                        
Query: 235  tgcccatcgtcactgcagtacagtgtaaccccactgcacatgccagtttcatctgtagaa 294
            |||||||| || |||||||||||||||||||| ||||| ||||||||| |||||||||||
Sbjct: 1947 tgcccatcttctctgcagtacagtgtaacccctctgcatatgccagttacatctgtagaa 2006

              
Query: 295  cc 296
            ||
Sbjct: 2007 cc 2008



 Score =  139 bits (70), Expect = 1e-29
 Identities = 121/138 (87%)
 Strand = Plus / Plus

                                                                        
Query: 552  tcctttgcttcacctgccacttcctacttcaccatttgtttcattgcatagctcacaggt 611
            |||||| ||||||||||| ||||||||||||||| |||| || |||||| | ||||| ||
Sbjct: 2129 tcctttacttcacctgccgcttcctacttcaccacttgtatccttgcatggttcacaagt 2188

                                                                        
Query: 612  ttcaacatttacaccattgatgtctgatcctattgtgcatgtcccagtcatcgatatgtg 671
            | |||| || ||||||||||||||||| || |||||||||||||| ||||| ||| ||||
Sbjct: 2189 tccaactttcacaccattgatgtctgaccccattgtgcatgtcccggtcattgatgtgtg 2248

                              
Query: 672  ttcctctggtcaggctta 689
            ||||||||| ||||||||
Sbjct: 2249 ttcctctggccaggctta 2266



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                        
Query: 356  tttctgcaaagttggatacaaataattcaccatcacttaatcttccatcgatactgcatg 415
            ||||||||||| ||||||||| | ||   || ||||||||||||||||||||||||| ||
Sbjct: 2068 tttctgcaaagatggatacaactgatctcccgtcacttaatcttccatcgatactgcgtg 2127

                                            
Query: 416  atccttcgcttcacctcccgcttcctacttca 447
            ||||||  |||||||| |||||||||||||||
Sbjct: 2128 atcctttacttcacctgccgcttcctacttca 2159
to top
>dbj|AK067928.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128H10, full
            insert sequence
          Length = 2333

 Score =  210 bits (106), Expect = 5e-51
 Identities = 163/182 (89%)
 Strand = Plus / Plus

                                                                        
Query: 115  ctagacctgcctctttcatttcccttgctgccatctctttatccttttgcgactcaatgt 174
            |||||| |||||||||||||||||||| |||||||||| | |||| |||||||||||| |
Sbjct: 1289 ctagacttgcctctttcatttcccttgttgccatctctgtttcctcttgcgactcaatat 1348

                                                                        
Query: 175  ccactccctgagggttcttcagagaatccatttaagccttactattgctggtgtccgcca 234
            ||||| ||| ||| |||| ||||| | |||||||||||||||||||||||||| || |||
Sbjct: 1349 ccacttcctaaggattctacagagcaaccatttaagccttactattgctggtgcccacca 1408

                                                                        
Query: 235  tgcccatcgtcactgcagtacagtgtaaccccactgcacatgccagtttcatctgtagaa 294
            |||||||| || |||||||||||||||||||| ||||| ||||||||| |||||||||||
Sbjct: 1409 tgcccatcttctctgcagtacagtgtaacccctctgcatatgccagttacatctgtagaa 1468

              
Query: 295  cc 296
            ||
Sbjct: 1469 cc 1470



 Score =  147 bits (74), Expect = 6e-32
 Identities = 122/138 (88%)
 Strand = Plus / Plus

                                                                        
Query: 552  tcctttgcttcacctgccacttcctacttcaccatttgtttcattgcatagctcacaggt 611
            |||||| ||||||||||| ||||||||||||||| |||| || |||||| | ||||| ||
Sbjct: 1591 tcctttacttcacctgccgcttcctacttcaccacttgtatccttgcatggttcacaagt 1650

                                                                        
Query: 612  ttcaacatttacaccattgatgtctgatcctattgtgcatgtcccagtcatcgatatgtg 671
            | ||||||| ||||||||||||||||| || |||||||||||||| ||||| ||| ||||
Sbjct: 1651 tccaacattcacaccattgatgtctgaccccattgtgcatgtcccggtcattgatgtgtg 1710

                              
Query: 672  ttcctctggtcaggctta 689
            ||||||||| ||||||||
Sbjct: 1711 ttcctctggccaggctta 1728



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                        
Query: 356  tttctgcaaagttggatacaaataattcaccatcacttaatcttccatcgatactgcatg 415
            ||||||||||| ||||||||| | ||   || ||||||||||||||||||||||||| ||
Sbjct: 1530 tttctgcaaagatggatacaactgatctcccgtcacttaatcttccatcgatactgcgtg 1589

                                            
Query: 416  atccttcgcttcacctcccgcttcctacttca 447
            ||||||  |||||||| |||||||||||||||
Sbjct: 1590 atcctttacttcacctgccgcttcctacttca 1621
to top
>dbj|AK066470.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066L17, full
           insert sequence
          Length = 2071

 Score =  210 bits (106), Expect = 5e-51
 Identities = 163/182 (89%)
 Strand = Plus / Plus

                                                                       
Query: 115 ctagacctgcctctttcatttcccttgctgccatctctttatccttttgcgactcaatgt 174
           |||||| |||||||||||||||||||| |||||||||| | |||| |||||||||||| |
Sbjct: 797 ctagacttgcctctttcatttcccttgttgccatctctgtttcctcttgcgactcaatat 856

                                                                       
Query: 175 ccactccctgagggttcttcagagaatccatttaagccttactattgctggtgtccgcca 234
           ||||| ||| ||| |||| ||||| | |||||||||||||||||||||||||| || |||
Sbjct: 857 ccacttcctaaggtttctacagagcaaccatttaagccttactattgctggtgcccacca 916

                                                                       
Query: 235 tgcccatcgtcactgcagtacagtgtaaccccactgcacatgccagtttcatctgtagaa 294
           |||||||| || |||||||||||||||||||| ||||| ||||||||| |||||||||||
Sbjct: 917 tgcccatcttctctgcagtacagtgtaacccctctgcatatgccagttacatctgtagaa 976

             
Query: 295 cc 296
           ||
Sbjct: 977 cc 978



 Score =  147 bits (74), Expect = 6e-32
 Identities = 122/138 (88%)
 Strand = Plus / Plus

                                                                        
Query: 552  tcctttgcttcacctgccacttcctacttcaccatttgtttcattgcatagctcacaggt 611
            |||||| ||||||||||| ||||||||||||||| |||| || |||||| | ||||| ||
Sbjct: 1099 tcctttacttcacctgccgcttcctacttcaccacttgtatccttgcatggttcacaagt 1158

                                                                        
Query: 612  ttcaacatttacaccattgatgtctgatcctattgtgcatgtcccagtcatcgatatgtg 671
            | ||||||| ||||||||||||||||| || |||||||||||||| ||||| ||| ||||
Sbjct: 1159 tccaacattcacaccattgatgtctgaccccattgtgcatgtcccggtcattgatgtgtg 1218

                              
Query: 672  ttcctctggtcaggctta 689
            ||||||||| ||||||||
Sbjct: 1219 ttcctctggccaggctta 1236



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                        
Query: 356  tttctgcaaagttggatacaaataattcaccatcacttaatcttccatcgatactgcatg 415
            ||||||||||| ||||||||| | ||   || ||||||||||||||||||||||||| ||
Sbjct: 1038 tttctgcaaagatggatacaactgatctcccgtcacttaatcttccatcgatactgcgtg 1097

                                            
Query: 416  atccttcgcttcacctcccgcttcctacttca 447
            ||||||  |||||||| |||||||||||||||
Sbjct: 1098 atcctttacttcacctgccgcttcctacttca 1129
to top
>gb|BT018172.1| Zea mays clone EL01N0557B07.c mRNA sequence
          Length = 829

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                            
Query: 614 caacatttacaccattgatgtctgatcctattgtgcatgtcccagtcat 662
           ||||||| |||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 51  caacattcacaccattgatgtccgatcccattgtgcatgtcccagtcat 99
to top
>dbj|AP008222.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
             fosmid clone:OSJNOa219C16
          Length = 39990

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                   
Query: 115   ctagacctgcctctttcatttcccttgctgccatctctttatccttttgcgact 168
             |||||| |||||||||||||||||||| |||||||||| | |||| ||||||||
Sbjct: 39937 ctagacttgcctctttcatttcccttgttgccatctctgtttcctcttgcgact 39990
to top
>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome
          Length = 2694756

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 378     taattcaccatcacttaatctt 399
               ||||||||||||||||||||||
Sbjct: 1399887 taattcaccatcacttaatctt 1399866
to top
>gb|AC005066.1|AC005066 Homo sapiens BAC clone CTB-118P15 from 8q21, complete sequence
          Length = 226916

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 571   cttcctacttcaccatttgttt 592
             ||||||||||||||||||||||
Sbjct: 52193 cttcctacttcaccatttgttt 52172
to top
>gb|AC079199.9| Homo sapiens chromosome 17, clone RP11-94L15, complete sequence
          Length = 161815

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 609    ggtttcaacatttacaccattgatg 633
              ||||| |||||||||||||||||||
Sbjct: 138794 ggttttaacatttacaccattgatg 138770
to top
>gb|AC024218.17| Homo sapiens 3 BAC RP11-668N23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 141860

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 181   cctgagggttcttcagagaat 201
             |||||||||||||||||||||
Sbjct: 83907 cctgagggttcttcagagaat 83927
to top
>emb|BX248391.22| Zebrafish DNA sequence from clone CH211-212M14 in linkage group 17,
             complete sequence
          Length = 202287

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 74    atggggattgttcaaaaaaca 94
             |||||||||||||||||||||
Sbjct: 56617 atggggattgttcaaaaaaca 56597
to top
>emb|BX539349.17| Zebrafish DNA sequence from clone DKEY-74L17 in linkage group 17,
              complete sequence
          Length = 140881

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 74     atggggattgttcaaaaaaca 94
              |||||||||||||||||||||
Sbjct: 104946 atggggattgttcaaaaaaca 104966
to top
>gb|AC113416.2| Homo sapiens chromosome 5 clone RP11-560F8, complete sequence
          Length = 190848

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 253    tacagtgtaaccccactgcacatgc 277
              |||| ||||||||||||||||||||
Sbjct: 101718 tacaatgtaaccccactgcacatgc 101742
to top
>gb|AC017032.3|AC017032 Homo sapiens BAC clone RP11-292E8 from Y, complete sequence
          Length = 45123

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                              
Query: 610   gtttcaacatttacaccattgatgtctgatcct 642
             ||||||||||||| |||||| ||||||||||||
Sbjct: 19601 gtttcaacattta-accattcatgtctgatcct 19632
to top
>gb|U29952.1|LMU29952 Leishmania major infective insect stage-specific protein gene,
            complete cds
          Length = 2263

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 128  tttcatttcccttgctgccatctct 152
            ||||||||| |||||||||||||||
Sbjct: 2213 tttcatttcgcttgctgccatctct 2237
to top
>gb|AC159810.2| Mus musculus BAC clone RP24-94A19 from chromosome 9, complete sequence
          Length = 168537

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 590   tttcattgcatagctcacag 609
             ||||||||||||||||||||
Sbjct: 73370 tttcattgcatagctcacag 73351
to top
>gb|AC073600.3| Genomic sequence for Mus musculus, clone RP23-119A19, complete sequence
          Length = 197456

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 344   ctatctcatcattttctgcaaagt 367
             ||||||| ||||||||||||||||
Sbjct: 29235 ctatctcttcattttctgcaaagt 29212
to top
>emb|AL356100.8| Human DNA sequence from clone RP11-359H22 on chromosome 10 Contains
             part of a novel gene (KIAA0534), complete sequence
          Length = 190361

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 665   atatgtgttcctctggtcaggcttattt 692
             |||| ||||| |||||||||||||||||
Sbjct: 92460 atatttgttcttctggtcaggcttattt 92487
to top
>emb|AL158838.12| Human DNA sequence from clone RP11-161I10 on chromosome 1 Contains part
             of a novel gene and the 5' end of a novel gene, complete
             sequence
          Length = 170326

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 611   tttcaacatttacaccattg 630
             ||||||||||||||||||||
Sbjct: 39269 tttcaacatttacaccattg 39288
to top
>emb|AL022319.2|HS172B20 Human DNA sequence from clone RP1-172B20 on chromosome 22q12.3-13.1
              Contains the 3' part of the CACNA1I gene for
              voltage-dependent calcium channel, alpha 1I subunit, ESTs,
              STSs, GSSs and a putative CpG island, complete sequence
          Length = 213721

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 62     gtgaagtgtgtgatggggat 81
              ||||||||||||||||||||
Sbjct: 100225 gtgaagtgtgtgatggggat 100244
to top
>emb|AL022150.2|HS198G23 Human DNA sequence from clone RP1-198G23 on chromosome Xq21.1-21.33
             Contains a nonhistone chromosomal protein (HMG-14)
             pseudogene and a ubiquitin-conjugating enzyme E2 (UBE2V1)
             pseudogene, complete sequence
          Length = 94886

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 51    tgattcaaccagtgaagtgtgtga 74
             ||||||||||||| ||||||||||
Sbjct: 69981 tgattcaaccagttaagtgtgtga 69958
to top
>gb|AC160537.6| Mus musculus chromosome 8, clone RP24-95H19, complete sequence
          Length = 188409

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 611    tttcaacatttacaccattg 630
              ||||||||||||||||||||
Sbjct: 137868 tttcaacatttacaccattg 137887
to top
>gb|AC183387.3| Pan troglodytes BAC clone CH251-113M12 from chromosome unknown, complete
              sequence
          Length = 175955

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 579    ttcaccatttgtttcattgc 598
              ||||||||||||||||||||
Sbjct: 164278 ttcaccatttgtttcattgc 164297
to top
>gb|AE011862.1| Xanthomonas axonopodis pv. citri str. 306,  section 240 of 469 of the
            complete genome
          Length = 12271

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 667  atgtgttcctctggtcaggc 686
            ||||||||||||||||||||
Sbjct: 8579 atgtgttcctctggtcaggc 8560
to top
>gb|AC011841.7| Homo sapiens chromosome 17, clone RP11-272E10, complete sequence
          Length = 174588

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 579    ttcaccatttgtttcattgc 598
              ||||||||||||||||||||
Sbjct: 104867 ttcaccatttgtttcattgc 104886
to top
>gb|AC012325.9| Homo sapiens chromosome 16 clone RP11-93H5, complete sequence
          Length = 204524

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 353    cattttctgcaaagttggat 372
              ||||||||||||||||||||
Sbjct: 131725 cattttctgcaaagttggat 131744
to top
>gb|AC132186.3| Homo sapiens chromosome 16 clone CTD-2258A20, complete sequence
          Length = 157833

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 353   cattttctgcaaagttggat 372
             ||||||||||||||||||||
Sbjct: 40877 cattttctgcaaagttggat 40896
to top
>dbj|AP001858.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-959F10, complete
             sequence
          Length = 210723

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   caatgtccactccctgaggg 188
             ||||||||||||||||||||
Sbjct: 22731 caatgtccactccctgaggg 22712
to top
>emb|AL683877.10| Mouse DNA sequence from clone RP23-120P2 on chromosome 4, complete
             sequence
          Length = 184168

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 334   gaagtatcatctatctcatcattt 357
             ||||||||||||||||||| ||||
Sbjct: 71387 gaagtatcatctatctcattattt 71364
to top
>emb|AL732513.8| Mouse DNA sequence from clone RP23-344B24 on chromosome 2, complete
             sequence
          Length = 209452

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 344   ctatctcatcattttctgcaaagt 367
             ||||||| ||||||||||||||||
Sbjct: 87074 ctatctcttcattttctgcaaagt 87051
to top
>gb|AC102210.6| Mus musculus chromosome 8, clone RP24-351F4, complete sequence
          Length = 165443

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 611    tttcaacatttacaccattg 630
              ||||||||||||||||||||
Sbjct: 152457 tttcaacatttacaccattg 152438
to top
>gb|AC163629.5| Mus musculus BAC clone RP24-542G7 from chromosome 17, complete sequence
          Length = 198902

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 490    cttcatcttccgtttcccac 509
              ||||||||||||||||||||
Sbjct: 166179 cttcatcttccgtttcccac 166160
to top
>gb|AC112493.2| Homo sapiens X BAC RP11-2M5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 164480

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 84     ttcaaaaaacagtatcacttcagc 107
              ||||||| ||||||||||||||||
Sbjct: 150220 ttcaaaacacagtatcacttcagc 150197


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,604,299
Number of Sequences: 3902068
Number of extensions: 6604299
Number of successful extensions: 129309
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 129167
Number of HSP's gapped (non-prelim): 135
length of query: 694
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 671
effective length of database: 17,143,297,704
effective search space: 11503152759384
effective search space used: 11503152759384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top