ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags19e09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK120240.1| Oryza sativa (japonica cultivar-group) cDNA clon... 299 4e-78
2gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome... 244 2e-61
3gb|AC134256.4| Oryza sativa (japonica cultivar-group), complete ... 244 2e-61
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 244 2e-61
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 244 2e-61
6ref|NM_111072.1| Arabidopsis thaliana ATP binding / ATP-dependen... 52 0.002
7gb|AC011664.10|ATAC011664 Arabidopsis thaliana chromosome III BA... 52 0.002
8gb|AF370520.1|AF370520 Arabidopsis thaliana putative helicase (F... 52 0.002
9gb|BT002188.1| Arabidopsis thaliana putative helicase (At3g02060... 52 0.002
10emb|BX293996.16| Zebrafish DNA sequence from clone DKEY-38J20 in... 42 1.6
11emb|BX571698.15| Zebrafish DNA sequence from clone DKEYP-121E10 ... 42 1.6
12emb|AL807739.6| Zebrafish DNA sequence from clone CH211-220F6 Co... 42 1.6
13emb|CR388092.29| Zebrafish DNA sequence from clone DKEY-285J13 i... 42 1.6
14ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfami... 40 6.3
15ref|XM_677326.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 6.3
16gb|AC165352.2| Mus musculus BAC clone RP23-205C7 from chromosome... 40 6.3
17gb|AC101886.16| Mus musculus chromosome 15, clone RP23-413E14, c... 40 6.3
18gb|AC131080.13| Mus musculus chromosome 16, clone RP23-438H16, c... 40 6.3
19emb|CR381607.8| Zebrafish DNA sequence from clone CH211-125I6 in... 40 6.3
20emb|AL136094.13| Human DNA sequence from clone RP3-527B10 on chr... 40 6.3
21emb|AL121834.20|HSJ509I19 Human DNA sequence from clone RP3-509I... 40 6.3
22gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome 40 6.3
23gb|AC151000.3| Medicago truncatula chromosome 2 BAC clone mth2-1... 40 6.3
24gb|AC008962.9| Homo sapiens chromosome 19 clone CTD-2356P16, com... 40 6.3
25gb|AC011741.9| Homo sapiens BAC clone RP11-113E4 from 2, complet... 40 6.3
26dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete... 40 6.3
27emb|CR735107.13| Zebrafish DNA sequence from clone CH211-127B16 ... 40 6.3
28gb|AE015927.1| Clostridium tetani E88, complete genome 40 6.3
29dbj|AP004517.1| Lotus japonicus genomic DNA, chromosome 6, clone... 40 6.3

>dbj|AK120240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044D20, full
            insert sequence
          Length = 3224

 Score =  299 bits (151), Expect = 4e-78
 Identities = 260/297 (87%)
 Strand = Plus / Plus

                                                                        
Query: 7    aaggcttctattgatgttcttaccctgtccgcaacacccattccgcgaactctgtatctt 66
            |||||||||||||||||||| || ||||| |||||||||||||| || ||| ||||||| 
Sbjct: 1370 aaggcttctattgatgttctcacactgtctgcaacacccattccacgtactttgtatctc 1429

                                                                        
Query: 67   gctttaaccggtttccgtgatgcaagtttaatgtctacaccacctccggaaagagttgct 126
            || || || |||||||||||||| |||||||||||||| || ||||| ||||||||||||
Sbjct: 1430 gcgttgacaggtttccgtgatgccagtttaatgtctacgccgcctccagaaagagttgct 1489

                                                                        
Query: 127  gtcangacctatgtgtcancatttagtagagaaagtgctctatcagctatcaaattggag 186
            || | |||||| ||||||  |||||| | |||||| |||||||||||||| || || |||
Sbjct: 1490 gtaaggacctacgtgtcaggatttagcaaagaaagggctctatcagctattaagtttgag 1549

                                                                        
Query: 187  ttgaagcgtggaggtcaagttttctatgttgttcctcgaataaaagccatagacgatgta 246
            |||   ||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| 
Sbjct: 1550 ttggcacgtggtggtcaagttttctatgttgttcctcgaataaaagcaatagatgatgtg 1609

                                                                     
Query: 247  ttgcaatttctcaaggactctcttccagatgtaccgatggctattgctcatggaaag 303
             |||||||||||||||| |||||||||||||| || |||||| ||||||||||||||
Sbjct: 1610 ctgcaatttctcaaggattctcttccagatgttccaatggctgttgctcatggaaag 1666



 Score =  242 bits (122), Expect = 9e-61
 Identities = 156/168 (92%)
 Strand = Plus / Plus

                                                                        
Query: 303  ggatagacttggagctattgaagagcattcggatcttggtcaaggtttccatgtcgcana 362
            ||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||| |
Sbjct: 1915 ggatagacttggagctattgaggagcattcagatcttggtcaaggtttccatgttgcaga 1974

                                                                        
Query: 363  gaaggatatgggtattaggggatttggaagcatgtntggtgagcaacaatctggagatgt 422
            ||||||||||||||| ||||| || |||||| ||| ||||||||||||||||||||||||
Sbjct: 1975 gaaggatatgggtatcagggggttcggaagcttgtttggtgagcaacaatctggagatgt 2034

                                                            
Query: 423  tgcaaatgttggcgtcgatctgttctttgatatgctttttgatagctt 470
            ||||||||||||| | ||||| ||||||||||||||||||||||||||
Sbjct: 2035 tgcaaatgttggcattgatctattctttgatatgctttttgatagctt 2082



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>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0080I08, complete sequence
          Length = 197156

 Score =  244 bits (123), Expect = 2e-61
 Identities = 157/169 (92%)
 Strand = Plus / Minus

                                                                         
Query: 302   aggatagacttggagctattgaagagcattcggatcttggtcaaggtttccatgtcgcan 361
             |||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||| 
Sbjct: 22857 aggatagacttggagctattgaggagcattcagatcttggtcaaggtttccatgttgcag 22798

                                                                         
Query: 362   agaaggatatgggtattaggggatttggaagcatgtntggtgagcaacaatctggagatg 421
             |||||||||||||||| ||||| || |||||| ||| |||||||||||||||||||||||
Sbjct: 22797 agaaggatatgggtatcagggggttcggaagcttgtttggtgagcaacaatctggagatg 22738

                                                              
Query: 422   ttgcaaatgttggcgtcgatctgttctttgatatgctttttgatagctt 470
             |||||||||||||| | ||||| ||||||||||||||||||||||||||
Sbjct: 22737 ttgcaaatgttggcattgatctattctttgatatgctttttgatagctt 22689



 Score =  143 bits (72), Expect = 6e-31
 Identities = 124/142 (87%)
 Strand = Plus / Minus

                                                                         
Query: 91    agtttaatgtctacaccacctccggaaagagttgctgtcangacctatgtgtcancattt 150
             |||||||||||||| || ||||| |||||||||||||| | |||||| ||||||  ||||
Sbjct: 25032 agtttaatgtctacgccgcctccagaaagagttgctgtaaggacctacgtgtcaggattt 24973

                                                                         
Query: 151   agtagagaaagtgctctatcagctatcaaattggagttgaagcgtggaggtcaagttttc 210
             || | |||||| |||||||||||||| || || ||||||   ||||| ||||||||||||
Sbjct: 24972 agcaaagaaagggctctatcagctattaagtttgagttggcacgtggtggtcaagttttc 24913

                                   
Query: 211   tatgttgttcctcgaataaaag 232
             ||||||||||||||||||||||
Sbjct: 24912 tatgttgttcctcgaataaaag 24891



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                         
Query: 7     aaggcttctattgatgttcttaccctgtccgcaacacccattccgcgaactctgtatctt 66
             |||||||||||||||||||| || ||||| |||||||||||||| || ||| ||||||| 
Sbjct: 25508 aaggcttctattgatgttctcacactgtctgcaacacccattccacgtactttgtatctc 25449

                                    
Query: 67    gctttaaccggtttccgtgatgc 89
             || || || ||||||||||||||
Sbjct: 25448 gcgttgacaggtttccgtgatgc 25426



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                         
Query: 235   atagacgatgtattgcaatttctcaaggactctcttccagatgtaccgatggctattgct 294
             ||||| |||||  |||||||||||||||| |||||||||||||| || |||||| |||||
Sbjct: 24608 atagatgatgtgctgcaatttctcaaggattctcttccagatgttccaatggctgttgct 24549

                       
Query: 295   catggaaagg 304
             ||||||||||
Sbjct: 24548 catggaaagg 24539



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>gb|AC134256.4| Oryza sativa (japonica cultivar-group), complete sequence
          Length = 178233

 Score =  244 bits (123), Expect = 2e-61
 Identities = 157/169 (92%)
 Strand = Plus / Minus

                                                                          
Query: 302    aggatagacttggagctattgaagagcattcggatcttggtcaaggtttccatgtcgcan 361
              |||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||| 
Sbjct: 172642 aggatagacttggagctattgaggagcattcagatcttggtcaaggtttccatgttgcag 172583

                                                                          
Query: 362    agaaggatatgggtattaggggatttggaagcatgtntggtgagcaacaatctggagatg 421
              |||||||||||||||| ||||| || |||||| ||| |||||||||||||||||||||||
Sbjct: 172582 agaaggatatgggtatcagggggttcggaagcttgtttggtgagcaacaatctggagatg 172523

                                                               
Query: 422    ttgcaaatgttggcgtcgatctgttctttgatatgctttttgatagctt 470
              |||||||||||||| | ||||| ||||||||||||||||||||||||||
Sbjct: 172522 ttgcaaatgttggcattgatctattctttgatatgctttttgatagctt 172474



 Score =  143 bits (72), Expect = 6e-31
 Identities = 124/142 (87%)
 Strand = Plus / Minus

                                                                          
Query: 91     agtttaatgtctacaccacctccggaaagagttgctgtcangacctatgtgtcancattt 150
              |||||||||||||| || ||||| |||||||||||||| | |||||| ||||||  ||||
Sbjct: 174817 agtttaatgtctacgccgcctccagaaagagttgctgtaaggacctacgtgtcaggattt 174758

                                                                          
Query: 151    agtagagaaagtgctctatcagctatcaaattggagttgaagcgtggaggtcaagttttc 210
              || | |||||| |||||||||||||| || || ||||||   ||||| ||||||||||||
Sbjct: 174757 agcaaagaaagggctctatcagctattaagtttgagttggcacgtggtggtcaagttttc 174698

                                    
Query: 211    tatgttgttcctcgaataaaag 232
              ||||||||||||||||||||||
Sbjct: 174697 tatgttgttcctcgaataaaag 174676



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                          
Query: 7      aaggcttctattgatgttcttaccctgtccgcaacacccattccgcgaactctgtatctt 66
              |||||||||||||||||||| || ||||| |||||||||||||| || ||| ||||||| 
Sbjct: 175293 aaggcttctattgatgttctcacactgtctgcaacacccattccacgtactttgtatctc 175234

                                     
Query: 67     gctttaaccggtttccgtgatgc 89
              || || || ||||||||||||||
Sbjct: 175233 gcgttgacaggtttccgtgatgc 175211



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                          
Query: 235    atagacgatgtattgcaatttctcaaggactctcttccagatgtaccgatggctattgct 294
              ||||| |||||  |||||||||||||||| |||||||||||||| || |||||| |||||
Sbjct: 174393 atagatgatgtgctgcaatttctcaaggattctcttccagatgttccaatggctgttgct 174334

                        
Query: 295    catggaaagg 304
              ||||||||||
Sbjct: 174333 catggaaagg 174324



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  244 bits (123), Expect = 2e-61
 Identities = 157/169 (92%)
 Strand = Plus / Minus

                                                                            
Query: 302      aggatagacttggagctattgaagagcattcggatcttggtcaaggtttccatgtcgcan 361
                |||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||| 
Sbjct: 18758262 aggatagacttggagctattgaggagcattcagatcttggtcaaggtttccatgttgcag 18758203

                                                                            
Query: 362      agaaggatatgggtattaggggatttggaagcatgtntggtgagcaacaatctggagatg 421
                |||||||||||||||| ||||| || |||||| ||| |||||||||||||||||||||||
Sbjct: 18758202 agaaggatatgggtatcagggggttcggaagcttgtttggtgagcaacaatctggagatg 18758143

                                                                 
Query: 422      ttgcaaatgttggcgtcgatctgttctttgatatgctttttgatagctt 470
                |||||||||||||| | ||||| ||||||||||||||||||||||||||
Sbjct: 18758142 ttgcaaatgttggcattgatctattctttgatatgctttttgatagctt 18758094



 Score =  143 bits (72), Expect = 6e-31
 Identities = 124/142 (87%)
 Strand = Plus / Minus

                                                                            
Query: 91       agtttaatgtctacaccacctccggaaagagttgctgtcangacctatgtgtcancattt 150
                |||||||||||||| || ||||| |||||||||||||| | |||||| ||||||  ||||
Sbjct: 18760437 agtttaatgtctacgccgcctccagaaagagttgctgtaaggacctacgtgtcaggattt 18760378

                                                                            
Query: 151      agtagagaaagtgctctatcagctatcaaattggagttgaagcgtggaggtcaagttttc 210
                || | |||||| |||||||||||||| || || ||||||   ||||| ||||||||||||
Sbjct: 18760377 agcaaagaaagggctctatcagctattaagtttgagttggcacgtggtggtcaagttttc 18760318

                                      
Query: 211      tatgttgttcctcgaataaaag 232
                ||||||||||||||||||||||
Sbjct: 18760317 tatgttgttcctcgaataaaag 18760296



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                            
Query: 7        aaggcttctattgatgttcttaccctgtccgcaacacccattccgcgaactctgtatctt 66
                |||||||||||||||||||| || ||||| |||||||||||||| || ||| ||||||| 
Sbjct: 18760913 aaggcttctattgatgttctcacactgtctgcaacacccattccacgtactttgtatctc 18760854

                                       
Query: 67       gctttaaccggtttccgtgatgc 89
                || || || ||||||||||||||
Sbjct: 18760853 gcgttgacaggtttccgtgatgc 18760831



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                            
Query: 235      atagacgatgtattgcaatttctcaaggactctcttccagatgtaccgatggctattgct 294
                ||||| |||||  |||||||||||||||| |||||||||||||| || |||||| |||||
Sbjct: 18760013 atagatgatgtgctgcaatttctcaaggattctcttccagatgttccaatggctgttgct 18759954

                          
Query: 295      catggaaagg 304
                ||||||||||
Sbjct: 18759953 catggaaagg 18759944



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  244 bits (123), Expect = 2e-61
 Identities = 157/169 (92%)
 Strand = Plus / Minus

                                                                            
Query: 302      aggatagacttggagctattgaagagcattcggatcttggtcaaggtttccatgtcgcan 361
                |||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||| 
Sbjct: 18917663 aggatagacttggagctattgaggagcattcagatcttggtcaaggtttccatgttgcag 18917604

                                                                            
Query: 362      agaaggatatgggtattaggggatttggaagcatgtntggtgagcaacaatctggagatg 421
                |||||||||||||||| ||||| || |||||| ||| |||||||||||||||||||||||
Sbjct: 18917603 agaaggatatgggtatcagggggttcggaagcttgtttggtgagcaacaatctggagatg 18917544

                                                                 
Query: 422      ttgcaaatgttggcgtcgatctgttctttgatatgctttttgatagctt 470
                |||||||||||||| | ||||| ||||||||||||||||||||||||||
Sbjct: 18917543 ttgcaaatgttggcattgatctattctttgatatgctttttgatagctt 18917495



 Score =  143 bits (72), Expect = 6e-31
 Identities = 124/142 (87%)
 Strand = Plus / Minus

                                                                            
Query: 91       agtttaatgtctacaccacctccggaaagagttgctgtcangacctatgtgtcancattt 150
                |||||||||||||| || ||||| |||||||||||||| | |||||| ||||||  ||||
Sbjct: 18919838 agtttaatgtctacgccgcctccagaaagagttgctgtaaggacctacgtgtcaggattt 18919779

                                                                            
Query: 151      agtagagaaagtgctctatcagctatcaaattggagttgaagcgtggaggtcaagttttc 210
                || | |||||| |||||||||||||| || || ||||||   ||||| ||||||||||||
Sbjct: 18919778 agcaaagaaagggctctatcagctattaagtttgagttggcacgtggtggtcaagttttc 18919719

                                      
Query: 211      tatgttgttcctcgaataaaag 232
                ||||||||||||||||||||||
Sbjct: 18919718 tatgttgttcctcgaataaaag 18919697



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                            
Query: 7        aaggcttctattgatgttcttaccctgtccgcaacacccattccgcgaactctgtatctt 66
                |||||||||||||||||||| || ||||| |||||||||||||| || ||| ||||||| 
Sbjct: 18920314 aaggcttctattgatgttctcacactgtctgcaacacccattccacgtactttgtatctc 18920255

                                       
Query: 67       gctttaaccggtttccgtgatgc 89
                || || || ||||||||||||||
Sbjct: 18920254 gcgttgacaggtttccgtgatgc 18920232



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                            
Query: 235      atagacgatgtattgcaatttctcaaggactctcttccagatgtaccgatggctattgct 294
                ||||| |||||  |||||||||||||||| |||||||||||||| || |||||| |||||
Sbjct: 18919414 atagatgatgtgctgcaatttctcaaggattctcttccagatgttccaatggctgttgct 18919355

                          
Query: 295      catggaaagg 304
                ||||||||||
Sbjct: 18919354 catggaaagg 18919345



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>ref|NM_111072.1| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/
            nucleic acid binding / transcription factor AT3G02060
            mRNA, complete cds
          Length = 2915

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 102/128 (79%)
 Strand = Plus / Plus

                                                                        
Query: 337  cttggtcaaggtttccatgtcgcanagaaggatatgggtattaggggatttggaagcatg 396
            ||||| ||||| |||||  | ||| |||||||||||||||| || || ||||| |  || 
Sbjct: 1877 cttggacaaggcttccaacttgcagagaaggatatgggtataagaggttttgggacaatc 1936

                                                                        
Query: 397  tntggtgagcaacaatctggagatgttgcaaatgttggcgtcgatctgttctttgatatg 456
            | ||| || |||||  | || ||||||| |||||| ||  ||||||| |||||||| |||
Sbjct: 1937 tttggagaacaacagacgggggatgttggaaatgtcggtatcgatctcttctttgaaatg 1996

                    
Query: 457  ctttttga 464
            ||||||||
Sbjct: 1997 ctttttga 2004



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 79/98 (80%)
 Strand = Plus / Plus

                                                                        
Query: 19   gatgttcttaccctgtccgcaacacccattccgcgaactctgtatcttgctttaaccggt 78
            ||||| |||||  |||||||||||||||| ||  | || |||||  | ||||| || || 
Sbjct: 1310 gatgtgcttacattgtccgcaacacccataccaaggacactgtacttagctttgactgga 1369

                                                  
Query: 79   ttccgtgatgcaagtttaatgtctacaccacctccgga 116
            ||||| ||||| |||||||| || ||||| ||||||||
Sbjct: 1370 ttccgggatgctagtttaatctccacaccgcctccgga 1407



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>gb|AC011664.10|ATAC011664 Arabidopsis thaliana chromosome III BAC F1C9 genomic sequence, complete
             sequence
          Length = 103960

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 102/128 (79%)
 Strand = Plus / Minus

                                                                         
Query: 337   cttggtcaaggtttccatgtcgcanagaaggatatgggtattaggggatttggaagcatg 396
             ||||| ||||| |||||  | ||| |||||||||||||||| || || ||||| |  || 
Sbjct: 52088 cttggacaaggcttccaacttgcagagaaggatatgggtataagaggttttgggacaatc 52029

                                                                         
Query: 397   tntggtgagcaacaatctggagatgttgcaaatgttggcgtcgatctgttctttgatatg 456
             | ||| || |||||  | || ||||||| |||||| ||  ||||||| |||||||| |||
Sbjct: 52028 tttggagaacaacagacgggggatgttggaaatgtcggtatcgatctcttctttgaaatg 51969

                     
Query: 457   ctttttga 464
             ||||||||
Sbjct: 51968 ctttttga 51961



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>gb|AF370520.1|AF370520 Arabidopsis thaliana putative helicase (F1C9.16) mRNA, complete cds
          Length = 2915

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 102/128 (79%)
 Strand = Plus / Plus

                                                                        
Query: 337  cttggtcaaggtttccatgtcgcanagaaggatatgggtattaggggatttggaagcatg 396
            ||||| ||||| |||||  | ||| |||||||||||||||| || || ||||| |  || 
Sbjct: 1877 cttggacaaggcttccaacttgcagagaaggatatgggtataagaggttttgggacaatc 1936

                                                                        
Query: 397  tntggtgagcaacaatctggagatgttgcaaatgttggcgtcgatctgttctttgatatg 456
            | ||| || |||||  | || ||||||| |||||| ||  ||||||| |||||||| |||
Sbjct: 1937 tttggagaacaacagacgggggatgttggaaatgtcggtatcgatctcttctttgaaatg 1996

                    
Query: 457  ctttttga 464
            ||||||||
Sbjct: 1997 ctttttga 2004



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 79/98 (80%)
 Strand = Plus / Plus

                                                                        
Query: 19   gatgttcttaccctgtccgcaacacccattccgcgaactctgtatcttgctttaaccggt 78
            ||||| |||||  |||||||||||||||| ||  | || |||||  | ||||| || || 
Sbjct: 1310 gatgtgcttacattgtccgcaacacccataccaaggacactgtacttagctttgactgga 1369

                                                  
Query: 79   ttccgtgatgcaagtttaatgtctacaccacctccgga 116
            ||||| ||||| |||||||| || ||||| ||||||||
Sbjct: 1370 ttccgggatgctagtttaatctccacaccgcctccgga 1407



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>gb|BT002188.1| Arabidopsis thaliana putative helicase (At3g02060) mRNA, complete cds
          Length = 2496

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 102/128 (79%)
 Strand = Plus / Plus

                                                                        
Query: 337  cttggtcaaggtttccatgtcgcanagaaggatatgggtattaggggatttggaagcatg 396
            ||||| ||||| |||||  | ||| |||||||||||||||| || || ||||| |  || 
Sbjct: 1825 cttggacaaggcttccaacttgcagagaaggatatgggtataagaggttttgggacaatc 1884

                                                                        
Query: 397  tntggtgagcaacaatctggagatgttgcaaatgttggcgtcgatctgttctttgatatg 456
            | ||| || |||||  | || ||||||| |||||| ||  ||||||| |||||||| |||
Sbjct: 1885 tttggagaacaacagacgggggatgttggaaatgtcggtatcgatctcttctttgaaatg 1944

                    
Query: 457  ctttttga 464
            ||||||||
Sbjct: 1945 ctttttga 1952



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 79/98 (80%)
 Strand = Plus / Plus

                                                                        
Query: 19   gatgttcttaccctgtccgcaacacccattccgcgaactctgtatcttgctttaaccggt 78
            ||||| |||||  |||||||||||||||| ||  | || |||||  | ||||| || || 
Sbjct: 1258 gatgtgcttacattgtccgcaacacccataccaaggacactgtacttagctttgactgga 1317

                                                  
Query: 79   ttccgtgatgcaagtttaatgtctacaccacctccgga 116
            ||||| ||||| |||||||| || ||||| ||||||||
Sbjct: 1318 ttccgggatgctagtttaatctccacaccgcctccgga 1355



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>emb|BX293996.16| Zebrafish DNA sequence from clone DKEY-38J20 in linkage group 1, complete
              sequence
          Length = 237723

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 416    gagatgttgcaaatgttggcg 436
              |||||||||||||||||||||
Sbjct: 204781 gagatgttgcaaatgttggcg 204761



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>emb|BX571698.15| Zebrafish DNA sequence from clone DKEYP-121E10 in linkage group 24,
              complete sequence
          Length = 168886

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 412    tctggagatgttgcaaatgtt 432
              |||||||||||||||||||||
Sbjct: 108896 tctggagatgttgcaaatgtt 108916



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>emb|AL807739.6| Zebrafish DNA sequence from clone CH211-220F6 Contains a novel gene for
             a protein similar to dynein heavy chain proteins and three
             CpG islands, complete sequence
          Length = 188716

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 416   gagatgttgcaaatgttggcg 436
             |||||||||||||||||||||
Sbjct: 81623 gagatgttgcaaatgttggcg 81603



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>emb|CR388092.29| Zebrafish DNA sequence from clone DKEY-285J13 in linkage group 1,
              complete sequence
          Length = 161368

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 416    gagatgttgcaaatgttggcg 436
              |||||||||||||||||||||
Sbjct: 117644 gagatgttgcaaatgttggcg 117624



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>ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfamily A (CYP2A) on chromosome
              19
          Length = 413528

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 241    gatgtattgcaatttctcaa 260
              ||||||||||||||||||||
Sbjct: 314037 gatgtattgcaatttctcaa 314018



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>ref|XM_677326.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN9149.2), mRNA
          Length = 4428

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 431  ttggcgtcgatctgttctttgata 454
            ||||||| ||||||||||||||||
Sbjct: 1289 ttggcgtggatctgttctttgata 1266



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>gb|AC165352.2| Mus musculus BAC clone RP23-205C7 from chromosome 15, complete sequence
          Length = 202977

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 89    caagtttaatgtctacaccacctc 112
             ||||| ||||||||||||||||||
Sbjct: 45313 caagtctaatgtctacaccacctc 45290



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>gb|AC101886.16| Mus musculus chromosome 15, clone RP23-413E14, complete sequence
          Length = 233347

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 89    caagtttaatgtctacaccacctc 112
             ||||| ||||||||||||||||||
Sbjct: 34521 caagtctaatgtctacaccacctc 34544



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>gb|AC131080.13| Mus musculus chromosome 16, clone RP23-438H16, complete sequence
          Length = 192584

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 440   atctgttctttgatatgctttttgatag 467
             ||||||||||||| |||||||| |||||
Sbjct: 69030 atctgttctttgaaatgcttttcgatag 69003



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>emb|CR381607.8| Zebrafish DNA sequence from clone CH211-125I6 in linkage group 7,
             complete sequence
          Length = 94930

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   agcaacaatctggagatgtt 423
             ||||||||||||||||||||
Sbjct: 67653 agcaacaatctggagatgtt 67672



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>emb|AL136094.13| Human DNA sequence from clone RP3-527B10 on chromosome 6q25.1-25.3
             Contains a high mobility group (nonhistone chromosomal)
             protein 4 (HMG4) pseudogene, complete sequence
          Length = 156667

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 254   ttctcaaggactctcttccagatg 277
             |||||| |||||||||||||||||
Sbjct: 75440 ttctcagggactctcttccagatg 75463



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>emb|AL121834.20|HSJ509I19 Human DNA sequence from clone RP3-509I19 on chromosome 6q23.1-24.1
              Contains a novel gene (includes DKFZP586D0623), the gene
              for a novel protein similar to mouse f-box only protein 16
              (Fbxo16) (Fbx16), a novel 7 transmembrane receptor
              (rhodopsin family) pseudogene similar to CCRL1, a novel
              gene, a suppressor of mif two 3 homolog 2 (yeast) (SMT3H2)
              pseudogene, the REPS1 gene for RALBP1 associated Eps domain
              containing 1 and two CpG islands, complete sequence
          Length = 178159

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 301    aaggatagacttggagctat 320
              ||||||||||||||||||||
Sbjct: 107931 aaggatagacttggagctat 107912



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>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome
          Length = 1842899

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 215    ttgttcctcgaataaaagccatagacgatgta 246
              ||||||||||||||||||  ||||| ||||||
Sbjct: 367218 ttgttcctcgaataaaaggaatagaagatgta 367249



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>gb|AC151000.3| Medicago truncatula chromosome 2 BAC clone mth2-193p1, complete
             sequence
          Length = 120579

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     caaaggcttctattgatgtt 24
             ||||||||||||||||||||
Sbjct: 53454 caaaggcttctattgatgtt 53473



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>gb|AC008962.9| Homo sapiens chromosome 19 clone CTD-2356P16, complete sequence
          Length = 154169

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 241   gatgtattgcaatttctcaa 260
             ||||||||||||||||||||
Sbjct: 90293 gatgtattgcaatttctcaa 90274



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>gb|AC011741.9| Homo sapiens BAC clone RP11-113E4 from 2, complete sequence
          Length = 141418

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 323    aagagcattcggatcttggtcaag 346
              ||||||||| ||||||||||||||
Sbjct: 115884 aagagcattaggatcttggtcaag 115907



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>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 199    ggtcaagttttctatgttgt 218
              ||||||||||||||||||||
Sbjct: 975449 ggtcaagttttctatgttgt 975430



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>emb|CR735107.13| Zebrafish DNA sequence from clone CH211-127B16 in linkage group 12,
              complete sequence
          Length = 183614

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 414    tggagatgttgcaaatgttg 433
              ||||||||||||||||||||
Sbjct: 116166 tggagatgttgcaaatgttg 116185



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>gb|AE015927.1| Clostridium tetani E88, complete genome
          Length = 2799251

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    cttctattgatgttcttacc 30
             ||||||||||||||||||||
Sbjct: 85200 cttctattgatgttcttacc 85181



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>dbj|AP004517.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT14B06, TM0045,
             complete sequence
          Length = 113139

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 365   aggatatgggtattaggggatttg 388
             ||||||| ||||||||||||||||
Sbjct: 82886 aggatattggtattaggggatttg 82863


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,147,909
Number of Sequences: 3902068
Number of extensions: 4147909
Number of successful extensions: 55917
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55778
Number of HSP's gapped (non-prelim): 135
length of query: 470
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 448
effective length of database: 17,147,199,772
effective search space: 7681945497856
effective search space used: 7681945497856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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