ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags18o23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF466200.2| Sorghum bicolor putative protein kinase gene, par... 60 9e-06
2gb|AC133609.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.14
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.14
5emb|BX323819.9| Zebrafish DNA sequence from clone CH211-132F19 i... 44 0.54
6gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 42 2.1
7emb|AJ011818.1|MFI011818 Mycosphaerella fijiensis microsatellite... 42 2.1
8emb|AL357974.16| Human DNA sequence from clone RP11-398M15 on ch... 42 2.1
9emb|BX548064.12| Zebrafish DNA sequence from clone CH211-51L17 i... 42 2.1
10gb|AC008453.6| Homo sapiens chromosome 5 clone CTC-345K18, compl... 42 2.1
11gb|AC008450.5|AC008450 Homo sapiens chromosome 5 clone CTC-343F1... 42 2.1
12gb|AE014133.1| Streptococcus mutans UA159, complete genome 42 2.1
13gb|AC154471.2| Mus musculus BAC clone RP23-195D3 from chromosome... 42 2.1
14gb|AC163666.2| Mus musculus BAC clone RP23-46B12 from chromosome... 40 8.5
15gb|AC116375.11| Mus musculus chromosome 5, clone RP24-197K18, co... 40 8.5
16gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 8.5
17gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 8.5
18gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 8.5
19gb|AC110209.11| Mus musculus chromosome 12, clone RP23-279O18, c... 40 8.5
20gb|AC147031.2| Pan troglodytes BAC clone RP43-98M7 from 7, compl... 40 8.5
21emb|BX324230.15| Zebrafish DNA sequence from clone CH211-42C5 in... 40 8.5
22emb|CR847508.9| Zebrafish DNA sequence from clone DKEY-235E19 in... 40 8.5
23ref|XM_806918.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.5
24gb|AC122215.4| Mus musculus BAC clone RP23-106M18 from 16, compl... 40 8.5
25gb|AC131738.3| Mus musculus BAC clone RP23-94E15 from 16, comple... 40 8.5
26gb|AC008060.5| Homo sapiens PAC clone RP5-912I13 from 7, complet... 40 8.5
27gb|AC004907.3| Homo sapiens PAC clone RP5-853H20 from 7, complet... 40 8.5
28gb|CP000001.1| Bacillus cereus E33L, complete genome 40 8.5
29gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome 40 8.5
30emb|Z83822.1|HS306D1 Human DNA sequence from clone RP1-306D1 on ... 40 8.5
31emb|AL359854.8| Human DNA sequence from clone RP11-144M17 on chr... 40 8.5
32emb|AL359458.17| Human DNA sequence from clone RP11-719J20 on ch... 40 8.5
33emb|AL157363.9| Human DNA sequence from clone RP11-268K3 on chro... 40 8.5
34gb|AC157934.3| Mus musculus chromosome 5, clone RP24-224K15, com... 40 8.5
35gb|AC093574.3| Homo sapiens chromosome 3 clone RP11-178K11, comp... 40 8.5
36gb|AF214671.8| Homo sapiens chromosome 8 clone GS1-42F21 map 8qt... 40 8.5
37emb|X54850.1|SKORFS S.kluyveri linear plasmid pSKL DNA for open ... 40 8.5
38emb|CR380958.1| Candida glabrata strain CBS138 chromosome L comp... 40 8.5
39gb|AC009780.12| Homo sapiens 12 BAC RP11-1C11 (Roswell Park Canc... 40 8.5
40gb|AC022034.7| Homo sapiens chromosome 8, clone RP11-400K9, comp... 40 8.5
41gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 255... 40 8.5
42gb|AC025043.7| Homo sapiens chromosome 15 clone RP11-516C1 map 1... 40 8.5
43gb|AC034103.7|AC034103 Homo sapiens chromosome 15 clone CTD-3231... 40 8.5
44gb|AC103778.2| Homo sapiens chromosome 8, clone RP11-463C14, com... 40 8.5
45gb|AC103777.14| Homo sapiens chromosome 8, clone RP11-460G23, co... 40 8.5
46gb|AC078863.15|AC078863 Mus musculus BAC RP23-406N7 (Roswell Pa... 40 8.5
47gb|AC025430.5|AC025430 Homo sapiens chromosome 15 clone CTD-2329... 40 8.5
48gb|AC012087.10|AC012087 Homo sapiens 3 BAC RP11-317L10,RP11-150K... 40 8.5
49gb|AC132439.4| Mus musculus BAC clone RP23-234H10 from 6, comple... 40 8.5
50gb|AC153637.11| Mus musculus 6 BAC RP23-313A2 (Roswell Park Canc... 40 8.5
51gb|AF060568.1|AF060568 Homo sapiens promyelocytic leukemia zinc ... 40 8.5
52gb|AC001234.1|AC001234 Homo sapiens Chromosome 11q23 PAC clone p... 40 8.5
53gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 8.5
54emb|CT010497.9| Mouse DNA sequence from clone RP23-239L12 on chr... 40 8.5
55emb|CT025673.8| Mouse DNA sequence from clone RP24-286H7 on chro... 40 8.5
56dbj|AB208916.1| Homo sapiens mRNA for zinc finger and BTB domain... 40 8.5
57emb|AL929186.7| Mouse DNA sequence from clone RP23-399K8 on chro... 40 8.5
58emb|Y15375.1|CCY15375 Ceratitis capitata CtxC2, CtxD genes 40 8.5
59dbj|AP002755.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 8.5 
>gb|AF466200.2| Sorghum bicolor putative protein kinase gene, partial cds; putative
             Cf-2, fertilization-independent endosperm proteins,
             hypothetical protein, putative non-LTR retroelement
             reverse transcriptase, OCL5 protein, tryptophan synthase
             beta-subunit, hypothetical proteins, putative AP
             endonuclease, putative RNA polymerase II complex component
             SRB7, putative beta-1,3-glucanase, hypothetical protein,
             TNP2-like protein, hypothetical protein, putative
             phosphate/phosphoenolpyruvate translocator, putative
             protein, hypothetical proteins, putative
             galactosyltransferase family, hypothetical protein,
             putative cytochrome P450 family, putative lipid transfer
             protein, putative photoreceptor-interacting protein, and
             hypothetical protein genes, complete cds; and hypothetical
             protein gene, partial cds
          Length = 202197

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                         
Query: 82    cacctaatgctgaacttattgattcctaacccactatgatgttgaataacacaatttaca 141
             ||||| ||||||||||||||||  |||| ||| || || || |||| |||| |||| || 
Sbjct: 79507 cacctgatgctgaacttattgagccctatcccgctgtgctgctgaacaacagaattgact 79448

                               
Query: 142   gtctcaatgaactttgct 159
             ||||||||||||||||||
Sbjct: 79447 gtctcaatgaactttgct 79430



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                         
Query: 254   tccagagcattctccaactttttgaaacaatgcttgtcctcgcagcctctttaagtggta 313
             |||||| |||||||||  || | || |||||||||||||| ||||||||||| ||||  |
Sbjct: 79356 tccagatcattctccactttctcgacacaatgcttgtccttgcagcctctttcagtgaaa 79297

                                      
Query: 314   gcaatgacattataacaggttgaat 338
             ||| |||||  |||| |||||||||
Sbjct: 79296 gcagtgacaagataagaggttgaat 79272
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>gb|AC133609.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0002C14, complete sequence
          Length = 154029

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 455   gatgcaaactatatgtatttttt 477
             |||||||||||||||||||||||
Sbjct: 58816 gatgcaaactatatgtatttttt 58794
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 455      gatgcaaactatatgtatttttt 477
                |||||||||||||||||||||||
Sbjct: 26155366 gatgcaaactatatgtatttttt 26155344
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 455      gatgcaaactatatgtatttttt 477
                |||||||||||||||||||||||
Sbjct: 26469186 gatgcaaactatatgtatttttt 26469164
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>emb|BX323819.9| Zebrafish DNA sequence from clone CH211-132F19 in linkage group 17,
             complete sequence
          Length = 178951

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 464   tatatgtattttttattgtagt 485
             ||||||||||||||||||||||
Sbjct: 29302 tatatgtattttttattgtagt 29323
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>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 377     tgaatttgactataactaatt 397
               |||||||||||||||||||||
Sbjct: 3308017 tgaatttgactataactaatt 3308037
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>emb|AJ011818.1|MFI011818 Mycosphaerella fijiensis microsatellite MfSSR203
          Length = 643

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 260 gcattctccaactttttgaaa 280
           |||||||||||||||||||||
Sbjct: 465 gcattctccaactttttgaaa 485
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>emb|AL357974.16| Human DNA sequence from clone RP11-398M15 on chromosome 1 Contains a
             novel gene, complete sequence
          Length = 93165

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 471   attttttattgtagttccatc 491
             |||||||||||||||||||||
Sbjct: 70058 attttttattgtagttccatc 70038
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>emb|BX548064.12| Zebrafish DNA sequence from clone CH211-51L17 in linkage group 11,
              complete sequence
          Length = 180201

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 459    caaactatatgtattttttattgta 483
              |||||||||| ||||||||||||||
Sbjct: 166105 caaactatatatattttttattgta 166081
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>gb|AC008453.6| Homo sapiens chromosome 5 clone CTC-345K18, complete sequence
          Length = 145064

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 350   agaaatgaccaaaatatttgg 370
             |||||||||||||||||||||
Sbjct: 35224 agaaatgaccaaaatatttgg 35204
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>gb|AC008450.5|AC008450 Homo sapiens chromosome 5 clone CTC-343F10, complete sequence
          Length = 92949

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 350  agaaatgaccaaaatatttgg 370
            |||||||||||||||||||||
Sbjct: 1450 agaaatgaccaaaatatttgg 1470
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>gb|AE014133.1| Streptococcus mutans UA159, complete genome
          Length = 2030921

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 188     taaactcatcgtcagtgtcagaatc 212
               |||||| ||||||||||||||||||
Sbjct: 1356190 taaacttatcgtcagtgtcagaatc 1356214
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>gb|AC154471.2| Mus musculus BAC clone RP23-195D3 from chromosome 14, complete sequence
          Length = 192057

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 525   ccctactcaggaggaattttt 545
             |||||||||||||||||||||
Sbjct: 90222 ccctactcaggaggaattttt 90202
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>gb|AC163666.2| Mus musculus BAC clone RP23-46B12 from chromosome 9, complete sequence
          Length = 213408

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    tttgcttgttttattttggt 173
              ||||||||||||||||||||
Sbjct: 158145 tttgcttgttttattttggt 158164
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>gb|AC116375.11| Mus musculus chromosome 5, clone RP24-197K18, complete sequence
          Length = 150306

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 268   caactttttgaaacaatgct 287
             ||||||||||||||||||||
Sbjct: 83394 caactttttgaaacaatgct 83413
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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 185     gagtaaactcatcgtcagtg 204
               ||||||||||||||||||||
Sbjct: 4075402 gagtaaactcatcgtcagtg 4075421
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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 185     gagtaaactcatcgtcagtg 204
               ||||||||||||||||||||
Sbjct: 4087559 gagtaaactcatcgtcagtg 4087578
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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 185     gagtaaactcatcgtcagtg 204
               ||||||||||||||||||||
Sbjct: 4087932 gagtaaactcatcgtcagtg 4087951
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>gb|AC110209.11| Mus musculus chromosome 12, clone RP23-279O18, complete sequence
          Length = 177587

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    gaaatgaccaaaatatttgg 370
              ||||||||||||||||||||
Sbjct: 170845 gaaatgaccaaaatatttgg 170826
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>gb|AC147031.2| Pan troglodytes BAC clone RP43-98M7 from 7, complete sequence
          Length = 175794

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 504    atcccttagaataagttgat 523
              ||||||||||||||||||||
Sbjct: 137078 atcccttagaataagttgat 137059
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>emb|BX324230.15| Zebrafish DNA sequence from clone CH211-42C5 in linkage group 7, complete
              sequence
          Length = 179902

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 464    tatatgtattttttattgta 483
              ||||||||||||||||||||
Sbjct: 147650 tatatgtattttttattgta 147631
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>emb|CR847508.9| Zebrafish DNA sequence from clone DKEY-235E19 in linkage group 9,
             complete sequence
          Length = 62311

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 464   tatatgtattttttattgta 483
             ||||||||||||||||||||
Sbjct: 60713 tatatgtattttttattgta 60694
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>ref|XM_806918.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053506933.50) partial mRNA
          Length = 1305

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 9   tatctttgcctttgatgaag 28
           ||||||||||||||||||||
Sbjct: 876 tatctttgcctttgatgaag 895
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>gb|AC122215.4| Mus musculus BAC clone RP23-106M18 from 16, complete sequence
          Length = 195086

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      tctattatctttgcctttga 23
              ||||||||||||||||||||
Sbjct: 149739 tctattatctttgcctttga 149720
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>gb|AC131738.3| Mus musculus BAC clone RP23-94E15 from 16, complete sequence
          Length = 199386

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      tctattatctttgcctttga 23
              ||||||||||||||||||||
Sbjct: 183489 tctattatctttgcctttga 183508
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>gb|AC008060.5| Homo sapiens PAC clone RP5-912I13 from 7, complete sequence
          Length = 161566

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 422    aaagtgcatatatttcaaag 441
              ||||||||||||||||||||
Sbjct: 140159 aaagtgcatatatttcaaag 140178
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>gb|AC004907.3| Homo sapiens PAC clone RP5-853H20 from 7, complete sequence
          Length = 130117

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 504   atcccttagaataagttgat 523
             ||||||||||||||||||||
Sbjct: 77874 atcccttagaataagttgat 77893
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 185     gagtaaactcatcgtcagtg 204
               ||||||||||||||||||||
Sbjct: 4129633 gagtaaactcatcgtcagtg 4129652
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>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome
          Length = 1485148

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     ctttgatgaagcagcaaagc 37
              ||||||||||||||||||||
Sbjct: 110366 ctttgatgaagcagcaaagc 110385
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>emb|Z83822.1|HS306D1 Human DNA sequence from clone RP1-306D1 on chromosome Xp11.2 Contains
             the 3' end of a novel gene (KIAA0215), complete sequence
          Length = 125983

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 349   aagaaatgaccaaaatattt 368
             ||||||||||||||||||||
Sbjct: 94754 aagaaatgaccaaaatattt 94735
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>emb|AL359854.8| Human DNA sequence from clone RP11-144M17 on chromosome X, complete
             sequence
          Length = 163573

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   gcaccaagaaatgaccaaaa 363
             ||||||||||||||||||||
Sbjct: 23905 gcaccaagaaatgaccaaaa 23886
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>emb|AL359458.17| Human DNA sequence from clone RP11-719J20 on chromosome 6, complete
             sequence
          Length = 96151

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 464   tatatgtattttttattgta 483
             ||||||||||||||||||||
Sbjct: 81039 tatatgtattttttattgta 81020
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>emb|AL157363.9| Human DNA sequence from clone RP11-268K3 on chromosome 13 Contains the 3'
              end of the GPC5 gene for glypican 5, complete sequence
          Length = 164732

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    tttgcttgttttattttggt 173
              ||||||||||||||||||||
Sbjct: 162837 tttgcttgttttattttggt 162818
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>gb|AC157934.3| Mus musculus chromosome 5, clone RP24-224K15, complete sequence
          Length = 160733

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 268    caactttttgaaacaatgct 287
              ||||||||||||||||||||
Sbjct: 153978 caactttttgaaacaatgct 153997
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>gb|AC093574.3| Homo sapiens chromosome 3 clone RP11-178K11, complete sequence
          Length = 151993

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 461   aactatatgtattttttatt 480
             ||||||||||||||||||||
Sbjct: 44912 aactatatgtattttttatt 44931
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>gb|AF214671.8| Homo sapiens chromosome 8 clone GS1-42F21 map 8qtel, complete
            sequence
          Length = 78545

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 254  tccagagcattctccaactt 273
            ||||||||||||||||||||
Sbjct: 3286 tccagagcattctccaactt 3305
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>emb|X54850.1|SKORFS S.kluyveri linear plasmid pSKL DNA for open reading frames 1-10
          Length = 14281

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 471  attttttattgtagttccat 490
            ||||||||||||||||||||
Sbjct: 3429 attttttattgtagttccat 3448
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>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence
          Length = 1440588

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 464     tatatgtattttttattgta 483
               ||||||||||||||||||||
Sbjct: 1181995 tatatgtattttttattgta 1182014
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>gb|AC009780.12| Homo sapiens 12 BAC RP11-1C11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 144454

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 422   aaagtgcatatatttcaaag 441
             ||||||||||||||||||||
Sbjct: 42673 aaagtgcatatatttcaaag 42692
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>gb|AC022034.7| Homo sapiens chromosome 8, clone RP11-400K9, complete sequence
          Length = 195768

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 318  tgacattataacaggttgaa 337
            ||||||||||||||||||||
Sbjct: 7512 tgacattataacaggttgaa 7531
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>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome
          Length = 2174500

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 469     gtattttttattgtagttcc 488
               ||||||||||||||||||||
Sbjct: 1720033 gtattttttattgtagttcc 1720014
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>gb|AC025043.7| Homo sapiens chromosome 15 clone RP11-516C1 map 15q15, complete sequence
          Length = 177028

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 366    tttgggtgagttgaatttga 385
              ||||||||||||||||||||
Sbjct: 160495 tttgggtgagttgaatttga 160514
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>gb|AC034103.7|AC034103 Homo sapiens chromosome 15 clone CTD-3231F14 map 15q21.2, complete
             sequence
          Length = 165416

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 464   tatatgtattttttattgta 483
             ||||||||||||||||||||
Sbjct: 81045 tatatgtattttttattgta 81064
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>gb|AC103778.2| Homo sapiens chromosome 8, clone RP11-463C14, complete sequence
          Length = 161500

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 318    tgacattataacaggttgaa 337
              ||||||||||||||||||||
Sbjct: 138299 tgacattataacaggttgaa 138318
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>gb|AC103777.14| Homo sapiens chromosome 8, clone RP11-460G23, complete sequence
          Length = 164588

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 254    tccagagcattctccaactt 273
              ||||||||||||||||||||
Sbjct: 109579 tccagagcattctccaactt 109560
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>gb|AC078863.15|AC078863 Mus musculus  BAC RP23-406N7 (Roswell Park Cancer Institute Mouse BAC
             Library) complete sequence
          Length = 188008

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 407   agacacaataaggtgaaagtgcat 430
             ||||||||||||||||||| ||||
Sbjct: 34492 agacacaataaggtgaaagggcat 34515
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>gb|AC025430.5|AC025430 Homo sapiens chromosome 15 clone CTD-2329K10 map 15q15, complete
            sequence
          Length = 87349

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 366  tttgggtgagttgaatttga 385
            ||||||||||||||||||||
Sbjct: 7040 tttgggtgagttgaatttga 7059
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>gb|AC012087.10|AC012087 Homo sapiens 3 BAC RP11-317L10,RP11-150K6,RP11-68D12 (Roswell Park
             Cancer Institute Human BAC Library) complete sequence
          Length = 194635

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 461   aactatatgtattttttatt 480
             ||||||||||||||||||||
Sbjct: 46015 aactatatgtattttttatt 45996
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>gb|AC132439.4| Mus musculus BAC clone RP23-234H10 from 6, complete sequence
          Length = 190308

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 428    catatatttcaaagagaaat 447
              ||||||||||||||||||||
Sbjct: 144591 catatatttcaaagagaaat 144610
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>gb|AC153637.11| Mus musculus 6 BAC RP23-313A2 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 226751

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 428   catatatttcaaagagaaat 447
             ||||||||||||||||||||
Sbjct: 51935 catatatttcaaagagaaat 51954
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>gb|AF060568.1|AF060568 Homo sapiens promyelocytic leukemia zinc finger protein (PLZF) gene,
              complete cds
          Length = 201239

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 461    aactatatgtattttttattgtag 484
              |||||| |||||||||||||||||
Sbjct: 137650 aactatctgtattttttattgtag 137627
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>gb|AC001234.1|AC001234 Homo sapiens Chromosome 11q23 PAC clone pDJ149k2 containing PLZF gene
             encoding kruppel-like zinc finger protein, complete
             sequence
          Length = 160748

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 461   aactatatgtattttttattgtag 484
             |||||| |||||||||||||||||
Sbjct: 59455 aactatctgtattttttattgtag 59478
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 185     gagtaaactcatcgtcagtg 204
               ||||||||||||||||||||
Sbjct: 4087432 gagtaaactcatcgtcagtg 4087451
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>emb|CT010497.9| Mouse DNA sequence from clone RP23-239L12 on chromosome 12, complete
              sequence
          Length = 189472

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    gaaatgaccaaaatatttgg 370
              ||||||||||||||||||||
Sbjct: 128543 gaaatgaccaaaatatttgg 128524
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>emb|CT025673.8| Mouse DNA sequence from clone RP24-286H7 on chromosome 9, complete
             sequence
          Length = 148870

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   tttgcttgttttattttggt 173
             ||||||||||||||||||||
Sbjct: 33362 tttgcttgttttattttggt 33381
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>dbj|AB208916.1| Homo sapiens mRNA for zinc finger and BTB domain containing 16
            variant protein
          Length = 4427

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 461  aactatatgtattttttattgtag 484
            |||||| |||||||||||||||||
Sbjct: 4092 aactatctgtattttttattgtag 4069
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>emb|AL929186.7| Mouse DNA sequence from clone RP23-399K8 on chromosome 2, complete
              sequence
          Length = 198573

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 407    agacacaataaggtgaaagtgcat 430
              ||||||||||||||||||| ||||
Sbjct: 172762 agacacaataaggtgaaagggcat 172739
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>emb|Y15375.1|CCY15375 Ceratitis capitata CtxC2, CtxD genes
          Length = 1575

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 457 tgcaaactatatgtattttttatt 480
           |||||||||||| |||||||||||
Sbjct: 51  tgcaaactatatttattttttatt 74
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>dbj|AP002755.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-635F12, complete
             sequences
          Length = 111328

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 461   aactatatgtattttttattgtag 484
             |||||| |||||||||||||||||
Sbjct: 92517 aactatctgtattttttattgtag 92494


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,382,215
Number of Sequences: 3902068
Number of extensions: 7382215
Number of successful extensions: 153866
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 153102
Number of HSP's gapped (non-prelim): 764
length of query: 621
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 598
effective length of database: 17,143,297,704
effective search space: 10251692026992
effective search space used: 10251692026992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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