| Clone Name | bags19d18 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK105307.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-B06, full insert sequence Length = 1216 Score = 355 bits (179), Expect = 9e-95 Identities = 389/459 (84%) Strand = Plus / Plus Query: 2 caagactgtgcgcgcgccggagccctacaacctgttcgaccatgagcccagcttccggaa 61 |||||| ||||||||||||||||| |||||||| | ||| || | || ||||||| || Sbjct: 378 caagacggtgcgcgcgccggagccgtacaacctctacgagcagggcaccggcttccgcaa 437 Query: 62 cacctacggttggagtatctccgtcgacaagcacgactacgagcccttggaccgctcaga 121 | ||||||| | || || |||||||||||||||||||||||||| | | || ||| || Sbjct: 438 cgcctacggatccagcgtcgccgtcgacaagcacgactacgagcccctcggccactccga 497 Query: 122 catcggcgtctatctcgtcaacctcaccgccggctcgatgatggcgccacacgtgaaccc 181 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 498 catcggcgtctatctcgtcaacctcaccgccggatcgatgatggcgccgcacgtgaaccc 557 Query: 182 gagggcggcggagtacggcgtggtgctcggcggggaaggcatcatccaggtggtcttccc 241 ||||||| ||||||||||||| |||||| ||||| ||| |||| |||| || ||||| Sbjct: 558 gagggcgacggagtacggcgtcgtgctcagcgggacgggctgcatcgaggtcgtgttccc 617 Query: 242 caacgggtcccttgcgatgagcgcgcaggtgcgtgccggcgacgtgttccggatcccacg 301 |||||||| |||||||||||| |||||| ||||||||||||||| ||||| || Sbjct: 618 gaacgggtcgaaggcgatgagcgcgacggtgcgcgccggcgacgtgttctacatcccgcg 677 Query: 302 ctacttcccgttcgtccaggtagcgtcgcggggtgggccgttcgtgttcttcgggttcac 361 ||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 678 ctacttcccgttctgccaggtggcgtcgcggggcgggccgttcgtgttcttcgggttcac 737 Query: 362 cacgtcggcgctgcggaacaagcctcagttcctggtcggccccacctctgtcctccgcgt 421 |||||||||| ||||||| | ||||||||||| |||||| | |||| || ||||||| Sbjct: 738 gacgtcggcgcggcggaaccaccctcagttcctcgtcggcggctcctccgtgctccgcgc 797 Query: 422 gattctcgggccggagctcgcggccgggttgggcgtccc 460 | |||||| |||||||||| |||| ||| |||||||| Sbjct: 798 cctgctcgggacggagctcgccgccgcgttcggcgtccc 836
>gb|AY105246.1| Zea mays PCO130570 mRNA sequence Length = 1823 Score = 274 bits (138), Expect = 3e-70 Identities = 339/406 (83%) Strand = Plus / Minus Query: 13 gcgcgccggagccctacaacctgttcgaccatgagcccagcttccggaacacctacggtt 72 ||||||||||||| |||||||| | |||| |||||| | ||||||||| | ||||| | Sbjct: 760 gcgcgccggagccgtacaacctctacgacagcgagcccgggttccggaacgcgtacggct 701 Query: 73 ggagtatctccgtcgacaagcacgactacgagcccttggaccgctcagacatcggcgtct 132 ||| ||||||||||||||||| | ||||||||| | | | | | ||||||||||||| Sbjct: 700 ggaccgtctccgtcgacaagcaccagtacgagcccctcaagcacccggacatcggcgtct 641 Query: 133 atctcgtcaacctcaccgccggctcgatgatggcgccacacgtgaacccgagggcggcgg 192 | ||||| ||||||||||| || |||||| ||||||| ||||||||||| ||||| ||| Sbjct: 640 acctcgtgaacctcaccgcggggtcgatgctggcgccgcacgtgaaccctcgggcgacgg 581 Query: 193 agtacggcgtggtgctcggcggggaaggcatcatccaggtggtcttccccaacgggtccc 252 |||||||||||||||| ||||||||||||| |||||||||| ||||| |||||||||| Sbjct: 580 agtacggcgtggtgctgggcggggaaggcacggtccaggtggtgttcccgaacgggtccc 521 Query: 253 ttgcgatgagcgcgcaggtgcgtgccggcgacgtgttccggatcccacgctacttcccgt 312 | |||||||||| | |||||| |||||||||||||| ||||||| ||||||||||| | Sbjct: 520 tggcgatgagcgaggtggtgcgccccggcgacgtgttctggatcccgcgctacttcccct 461 Query: 313 tcgtccaggtagcgtcgcggggtgggccgttcgtgttcttcgggttcaccacgtcggcgc 372 || |||||| ||| |||||| ||||| |||| ||||||||| |||||||| ||||||| Sbjct: 460 tctgccaggtggcggcgcgggccgggcccttcgagttcttcggcttcaccacctcggcgc 401 Query: 373 tgcggaacaagcctcagttcctggtcggccccacctctgtcctccg 418 || ||| ||| ||||||||||||||| || |||| || ||||| Sbjct: 400 gccgcaaccggccgcagttcctggtcggcgcctcctcggtgctccg 355
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 240 bits (121), Expect = 4e-60 Identities = 259/305 (84%) Strand = Plus / Minus Query: 156 tcgatgatggcgccacacgtgaacccgagggcggcggagtacggcgtggtgctcggcggg 215 |||||||||||||| |||||||||||||||||| ||||||||||||| |||||| ||||| Sbjct: 12421050 tcgatgatggcgccgcacgtgaacccgagggcgacggagtacggcgtcgtgctcagcggg 12420991 Query: 216 gaaggcatcatccaggtggtcttccccaacgggtcccttgcgatgagcgcgcaggtgcgt 275 ||| |||| |||| || ||||| |||||||| |||||||||||| |||||| Sbjct: 12420990 acgggctgcatcgaggtcgtgttcccgaacgggtcgaaggcgatgagcgcgacggtgcgc 12420931 Query: 276 gccggcgacgtgttccggatcccacgctacttcccgttcgtccaggtagcgtcgcggggt 335 ||||||||||||||| ||||| ||||||||||||||| |||||| ||||||||||| Sbjct: 12420930 gccggcgacgtgttctacatcccgcgctacttcccgttctgccaggtggcgtcgcggggc 12420871 Query: 336 gggccgttcgtgttcttcgggttcaccacgtcggcgctgcggaacaagcctcagttcctg 395 |||||||||||||||||||||||||| |||||||||| ||||||| | ||||||||||| Sbjct: 12420870 gggccgttcgtgttcttcgggttcacgacgtcggcgcggcggaaccaccctcagttcctc 12420811 Query: 396 gtcggccccacctctgtcctccgcgtgattctcgggccggagctcgcggccgggttgggc 455 |||||| | |||| || ||||||| | |||||| |||||||||| |||| ||| ||| Sbjct: 12420810 gtcggcggctcctccgtgctccgcgccctgctcgggacggagctcgccgccgcgttcggc 12420751 Query: 456 gtccc 460 ||||| Sbjct: 12420750 gtccc 12420746 Score = 119 bits (60), Expect = 9e-24 Identities = 129/152 (84%) Strand = Plus / Minus Query: 2 caagactgtgcgcgcgccggagccctacaacctgttcgaccatgagcccagcttccggaa 61 |||||| ||||||||||||||||| |||||||| | ||| || | || ||||||| || Sbjct: 12421316 caagacggtgcgcgcgccggagccgtacaacctctacgagcagggcaccggcttccgcaa 12421257 Query: 62 cacctacggttggagtatctccgtcgacaagcacgactacgagcccttggaccgctcaga 121 | ||||||| | || || |||||||||||||||||||||||||| | | || ||| || Sbjct: 12421256 cgcctacggatccagcgtcgccgtcgacaagcacgactacgagcccctcggccactccga 12421197 Query: 122 catcggcgtctatctcgtcaacctcaccgccg 153 |||||||||||||||||||||||||||||||| Sbjct: 12421196 catcggcgtctatctcgtcaacctcaccgccg 12421165
>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0098H14, complete sequence Length = 132560 Score = 240 bits (121), Expect = 4e-60 Identities = 259/305 (84%) Strand = Plus / Minus Query: 156 tcgatgatggcgccacacgtgaacccgagggcggcggagtacggcgtggtgctcggcggg 215 |||||||||||||| |||||||||||||||||| ||||||||||||| |||||| ||||| Sbjct: 80068 tcgatgatggcgccgcacgtgaacccgagggcgacggagtacggcgtcgtgctcagcggg 80009 Query: 216 gaaggcatcatccaggtggtcttccccaacgggtcccttgcgatgagcgcgcaggtgcgt 275 ||| |||| |||| || ||||| |||||||| |||||||||||| |||||| Sbjct: 80008 acgggctgcatcgaggtcgtgttcccgaacgggtcgaaggcgatgagcgcgacggtgcgc 79949 Query: 276 gccggcgacgtgttccggatcccacgctacttcccgttcgtccaggtagcgtcgcggggt 335 ||||||||||||||| ||||| ||||||||||||||| |||||| ||||||||||| Sbjct: 79948 gccggcgacgtgttctacatcccgcgctacttcccgttctgccaggtggcgtcgcggggc 79889 Query: 336 gggccgttcgtgttcttcgggttcaccacgtcggcgctgcggaacaagcctcagttcctg 395 |||||||||||||||||||||||||| |||||||||| ||||||| | ||||||||||| Sbjct: 79888 gggccgttcgtgttcttcgggttcacgacgtcggcgcggcggaaccaccctcagttcctc 79829 Query: 396 gtcggccccacctctgtcctccgcgtgattctcgggccggagctcgcggccgggttgggc 455 |||||| | |||| || ||||||| | |||||| |||||||||| |||| ||| ||| Sbjct: 79828 gtcggcggctcctccgtgctccgcgccctgctcgggacggagctcgccgccgcgttcggc 79769 Query: 456 gtccc 460 ||||| Sbjct: 79768 gtccc 79764 Score = 119 bits (60), Expect = 9e-24 Identities = 129/152 (84%) Strand = Plus / Minus Query: 2 caagactgtgcgcgcgccggagccctacaacctgttcgaccatgagcccagcttccggaa 61 |||||| ||||||||||||||||| |||||||| | ||| || | || ||||||| || Sbjct: 80334 caagacggtgcgcgcgccggagccgtacaacctctacgagcagggcaccggcttccgcaa 80275 Query: 62 cacctacggttggagtatctccgtcgacaagcacgactacgagcccttggaccgctcaga 121 | ||||||| | || || |||||||||||||||||||||||||| | | || ||| || Sbjct: 80274 cgcctacggatccagcgtcgccgtcgacaagcacgactacgagcccctcggccactccga 80215 Query: 122 catcggcgtctatctcgtcaacctcaccgccg 153 |||||||||||||||||||||||||||||||| Sbjct: 80214 catcggcgtctatctcgtcaacctcaccgccg 80183
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 240 bits (121), Expect = 4e-60 Identities = 259/305 (84%) Strand = Plus / Minus Query: 156 tcgatgatggcgccacacgtgaacccgagggcggcggagtacggcgtggtgctcggcggg 215 |||||||||||||| |||||||||||||||||| ||||||||||||| |||||| ||||| Sbjct: 12417813 tcgatgatggcgccgcacgtgaacccgagggcgacggagtacggcgtcgtgctcagcggg 12417754 Query: 216 gaaggcatcatccaggtggtcttccccaacgggtcccttgcgatgagcgcgcaggtgcgt 275 ||| |||| |||| || ||||| |||||||| |||||||||||| |||||| Sbjct: 12417753 acgggctgcatcgaggtcgtgttcccgaacgggtcgaaggcgatgagcgcgacggtgcgc 12417694 Query: 276 gccggcgacgtgttccggatcccacgctacttcccgttcgtccaggtagcgtcgcggggt 335 ||||||||||||||| ||||| ||||||||||||||| |||||| ||||||||||| Sbjct: 12417693 gccggcgacgtgttctacatcccgcgctacttcccgttctgccaggtggcgtcgcggggc 12417634 Query: 336 gggccgttcgtgttcttcgggttcaccacgtcggcgctgcggaacaagcctcagttcctg 395 |||||||||||||||||||||||||| |||||||||| ||||||| | ||||||||||| Sbjct: 12417633 gggccgttcgtgttcttcgggttcacgacgtcggcgcggcggaaccaccctcagttcctc 12417574 Query: 396 gtcggccccacctctgtcctccgcgtgattctcgggccggagctcgcggccgggttgggc 455 |||||| | |||| || ||||||| | |||||| |||||||||| |||| ||| ||| Sbjct: 12417573 gtcggcggctcctccgtgctccgcgccctgctcgggacggagctcgccgccgcgttcggc 12417514 Query: 456 gtccc 460 ||||| Sbjct: 12417513 gtccc 12417509 Score = 119 bits (60), Expect = 9e-24 Identities = 129/152 (84%) Strand = Plus / Minus Query: 2 caagactgtgcgcgcgccggagccctacaacctgttcgaccatgagcccagcttccggaa 61 |||||| ||||||||||||||||| |||||||| | ||| || | || ||||||| || Sbjct: 12418079 caagacggtgcgcgcgccggagccgtacaacctctacgagcagggcaccggcttccgcaa 12418020 Query: 62 cacctacggttggagtatctccgtcgacaagcacgactacgagcccttggaccgctcaga 121 | ||||||| | || || |||||||||||||||||||||||||| | | || ||| || Sbjct: 12418019 cgcctacggatccagcgtcgccgtcgacaagcacgactacgagcccctcggccactccga 12417960 Query: 122 catcggcgtctatctcgtcaacctcaccgccg 153 |||||||||||||||||||||||||||||||| Sbjct: 12417959 catcggcgtctatctcgtcaacctcaccgccg 12417928
>gb|BT018521.1| Zea mays clone EL01N0432B04.d mRNA sequence Length = 1363 Score = 234 bits (118), Expect = 2e-58 Identities = 334/406 (82%) Strand = Plus / Minus Query: 13 gcgcgccggagccctacaacctgttcgaccatgagcccagcttccggaacacctacggtt 72 ||||||||||||| |||||||| | |||| |||||| | ||||||||| | ||||| | Sbjct: 797 gcgcgccggagccgtacaacctctacgacagcgagcccgggttccggaacgcgtacggct 738 Query: 73 ggagtatctccgtcgacaagcacgactacgagcccttggaccgctcagacatcggcgtct 132 ||| ||||||||||||| ||| | ||||||||| | | | | | ||||||||||||| Sbjct: 737 ggaccgtctccgtcgacaaacaccaatacgagcccctcaagcacccggacatcggcgtct 678 Query: 133 atctcgtcaacctcaccgccggctcgatgatggcgccacacgtgaacccgagggcggcgg 192 | ||||| ||||||||||| || | | | ||||||| ||||||||||| ||||| ||| Sbjct: 677 acctcgtgaacctcaccgcggggtaaagggtggcgccgcacgtgaaccctcgggcgacgg 618 Query: 193 agtacggcgtggtgctcggcggggaaggcatcatccaggtggtcttccccaacgggtccc 252 |||||||||||||||| ||||||||||||| |||||||||| ||||| ||||| |||| Sbjct: 617 agtacggcgtggtgctgggcggggaaggcacggtccaggtggtgttcccgaacggatccc 558 Query: 253 ttgcgatgagcgcgcaggtgcgtgccggcgacgtgttccggatcccacgctacttcccgt 312 | |||||||||| | |||||| |||||||||||||| ||||||| ||||||||||| | Sbjct: 557 tggcgatgagcgaggtggtgcgccccggcgacgtgttctggatcccgcgctacttcccct 498 Query: 313 tcgtccaggtagcgtcgcggggtgggccgttcgtgttcttcgggttcaccacgtcggcgc 372 || |||||| ||| |||||| ||||| |||| ||||||||| |||||||| ||||||| Sbjct: 497 tctgccaggtggcggcgcgggccgggcccttcgagttcttcggcttcaccacctcggcgc 438 Query: 373 tgcggaacaagcctcagttcctggtcggccccacctctgtcctccg 418 || ||| ||| ||||||||||||||| || |||| || ||||| Sbjct: 437 gccgcaaccggccgcagttcctggtcggcgcctcctcggtgctccg 392
>gb|BT009042.1| Triticum aestivum clone wdk5c.pk006.d13:fis, full insert mRNA sequence Length = 454 Score = 127 bits (64), Expect = 4e-26 Identities = 108/123 (87%), Gaps = 6/123 (4%) Strand = Plus / Plus Query: 374 gcggaacaagcctcagttcctggtcggccccacctctgtcctccgcgtgattctcgggcc 433 |||||||||||| ||||||||| ||||||||||||||| ||||| |||| |||||||| Sbjct: 7 gcggaacaagccgcagttcctgacaggccccacctctgtcttccgcatgatgctcgggcc 66 Query: 434 ggagctcgcggccgggttgggcgtccc------tttgaaggaattgagggaggtggtgga 487 ||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 67 ggagctcgcggccgggttgggcgtccctgagaatgagaaggaattgagggaggtggtgga 126 Query: 488 ggc 490 ||| Sbjct: 127 ggc 129
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 145 tcaccgccggctcgatgatggcgc 168 |||||||||||||||||||||||| Sbjct: 4961765 tcaccgccggctcgatgatggcgc 4961788
>gb|U47078.1|DCU47078 Daucus carota globulin-like protein mRNA, somatic embryo clone Gea8, complete cds Length = 1719 Score = 48.1 bits (24), Expect = 0.027 Identities = 39/44 (88%) Strand = Plus / Plus Query: 129 gtctatctcgtcaacctcaccgccggctcgatgatggcgccaca 172 |||||||| ||||| |||||||| || || |||||||||||||| Sbjct: 1003 gtctatctagtcaatctcaccgcgggatcaatgatggcgccaca 1046
>gb|BT013421.1| Lycopersicon esculentum clone 132059R, mRNA sequence Length = 1748 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 120 gacatcggcgtctatctcgtcaacct 145 ||||| |||||||||||||||||||| Sbjct: 1011 gacattggcgtctatctcgtcaacct 1036
>emb|BX537302.12| Mouse DNA sequence from clone RP23-349I9 on chromosome 7, complete sequence Length = 214393 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 400 gccccacctctgtcctccgcgt 421 |||||||||||||||||||||| Sbjct: 93697 gccccacctctgtcctccgcgt 93718
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 tcgcggccgggttgggcgtcc 459 ||||||||||||||||||||| Sbjct: 434028 tcgcggccgggttgggcgtcc 434048
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 tcgtcaacctcaccgccggc 155 |||||||||||||||||||| Sbjct: 5886632 tcgtcaacctcaccgccggc 5886651
>gb|BC016414.1| Mus musculus acyl-CoA synthetase medium-chain family member 1, mRNA (cDNA clone MGC:25954 IMAGE:4238964), complete cds Length = 2059 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 gaattgagggaggtggtgga 487 |||||||||||||||||||| Sbjct: 963 gaattgagggaggtggtgga 944
>gb|BC022149.1| Mus musculus acyl-CoA synthetase medium-chain family member 1, mRNA (cDNA clone MGC:37916 IMAGE:5102652), complete cds Length = 2034 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 gaattgagggaggtggtgga 487 |||||||||||||||||||| Sbjct: 944 gaattgagggaggtggtgga 925
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 tcgacaagcacgactacgag 104 |||||||||||||||||||| Sbjct: 1945316 tcgacaagcacgactacgag 1945297
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 gtcaacctcaccgccggctcgatg 161 |||| ||||||||||||||||||| Sbjct: 2204880 gtcatcctcaccgccggctcgatg 2204903
>ref|NM_054094.4| Mus musculus acyl-CoA synthetase medium-chain family member 1 (Acsm1), mRNA Length = 2045 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 gaattgagggaggtggtgga 487 |||||||||||||||||||| Sbjct: 970 gaattgagggaggtggtgga 951
>gb|AY564767.1| Hepatitis C virus isolate BO-124 polyprotein gene, partial sequence Length = 141 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 acgtgaacccgagggcggcg 191 |||||||||||||||||||| Sbjct: 109 acgtgaacccgagggcggcg 90
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 gcaggtgcgtgccggcgacg 285 |||||||||||||||||||| Sbjct: 629489 gcaggtgcgtgccggcgacg 629508
>emb|X14112.1|HE1CG Human herpesvirus 1 complete genome Length = 152261 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 gattctcgggccggagctcgcggc 445 ||||| |||||||||||||||||| Sbjct: 31229 gattcccgggccggagctcgcggc 31206
>ref|XM_807077.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510305.79) partial mRNA Length = 4233 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gtcccttgcgatgagcgcgc 267 |||||||||||||||||||| Sbjct: 1926 gtcccttgcgatgagcgcgc 1945
>ref|XM_810226.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509153.10) partial mRNA Length = 4236 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gtcccttgcgatgagcgcgc 267 |||||||||||||||||||| Sbjct: 1926 gtcccttgcgatgagcgcgc 1945
>emb|AL390123.14| Human DNA sequence from clone RP11-566F5 on chromosome 10, complete sequence Length = 158093 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 tgttccggatcccacgctac 305 |||||||||||||||||||| Sbjct: 146009 tgttccggatcccacgctac 146028
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16 Length = 345012 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 tcaccgccggctcgatgatggcgc 168 |||||||||||||| ||||||||| Sbjct: 161259 tcaccgccggctcggtgatggcgc 161282
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 tcgtcaacctcaccgccggc 155 |||||||||||||||||||| Sbjct: 6553815 tcgtcaacctcaccgccggc 6553834
>gb|AC117499.3| Homo sapiens 12 BAC RP11-295A20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 13965 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 217 aaggcatcatccaggtggtcttccccaa 244 ||||||||||||||| |||||| ||||| Sbjct: 6771 aaggcatcatccagggggtcttgcccaa 6744
>dbj|AK149586.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730047E18 product:butyryl Coenzyme A synthetase 1, full insert sequence Length = 1706 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 gaattgagggaggtggtgga 487 |||||||||||||||||||| Sbjct: 992 gaattgagggaggtggtgga 973
>dbj|AK149550.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730036G06 product:butyryl Coenzyme A synthetase 1, full insert sequence Length = 2050 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 gaattgagggaggtggtgga 487 |||||||||||||||||||| Sbjct: 976 gaattgagggaggtggtgga 957
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 acgactacgagcccttggac 113 |||||||||||||||||||| Sbjct: 89824 acgactacgagcccttggac 89843
>gb|AC134587.3| Mus musculus BAC clone RP23-306P12 from chromosome 7, complete sequence Length = 166576 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 gaattgagggaggtggtgga 487 |||||||||||||||||||| Sbjct: 95502 gaattgagggaggtggtgga 95483
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gcgatgagcgcgcaggtgcg 274 |||||||||||||||||||| Sbjct: 1409559 gcgatgagcgcgcaggtgcg 1409540
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 tcgtcaacctcaccgccggc 155 |||||||||||||||||||| Sbjct: 5509973 tcgtcaacctcaccgccggc 5509992 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 tcaacctcaccgccggctcg 158 |||||||||||||||||||| Sbjct: 3431388 tcaacctcaccgccggctcg 3431407
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 gagtacggcgtggtgctcggcggg 215 ||||||||||||||| |||||||| Sbjct: 1739818 gagtacggcgtggtgatcggcggg 1739841
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 tcgtcaacctcaccgccggc 155 |||||||||||||||||||| Sbjct: 364293 tcgtcaacctcaccgccggc 364274
>dbj|AB059428.1| Mus musculus MACS mRNA for medium-chain acyl-CoA synthetase, complete cds Length = 2045 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 gaattgagggaggtggtgga 487 |||||||||||||||||||| Sbjct: 970 gaattgagggaggtggtgga 951 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,470,922 Number of Sequences: 3902068 Number of extensions: 2470922 Number of successful extensions: 52253 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 37 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 51394 Number of HSP's gapped (non-prelim): 854 length of query: 490 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 468 effective length of database: 17,147,199,772 effective search space: 8024889493296 effective search space used: 8024889493296 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)