ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags19d06 |
|---|---|
| Clone Library Name | barley_pub |
>MMT1_HORVU (Q9MBC2) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met| S-methyltransferase) (Hv-MMT1) Length = 1088 Score = 332 bits (850), Expect = 5e-91 Identities = 169/169 (100%), Positives = 169/169 (100%) Frame = +3 Query: 3 QEREPAEVISKEMIGFSSSAMSTLEGAEFFVPGSMESGVIHMDLDRSFLPVPSAVNASIF 182 QEREPAEVISKEMIGFSSSAMSTLEGAEFFVPGSMESGVIHMDLDRSFLPVPSAVNASIF Sbjct: 661 QEREPAEVISKEMIGFSSSAMSTLEGAEFFVPGSMESGVIHMDLDRSFLPVPSAVNASIF 720 Query: 183 ESFVRQNITDSETDVRSSIQQLVKDSYGFSAGGASEIIYGNTCLALFNKLVLCCMQEQGT 362 ESFVRQNITDSETDVRSSIQQLVKDSYGFSAGGASEIIYGNTCLALFNKLVLCCMQEQGT Sbjct: 721 ESFVRQNITDSETDVRSSIQQLVKDSYGFSAGGASEIIYGNTCLALFNKLVLCCMQEQGT 780 Query: 363 LLFPLGTNGHYVNAAKFVNATTLTIPTKADSGFKIEPSALADTLEKVSQ 509 LLFPLGTNGHYVNAAKFVNATTLTIPTKADSGFKIEPSALADTLEKVSQ Sbjct: 781 LLFPLGTNGHYVNAAKFVNATTLTIPTKADSGFKIEPSALADTLEKVSQ 829
>MMT1_MAIZE (Q8W519) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met| S-methyltransferase) Length = 1091 Score = 278 bits (710), Expect = 8e-75 Identities = 137/169 (81%), Positives = 152/169 (89%) Frame = +3 Query: 3 QEREPAEVISKEMIGFSSSAMSTLEGAEFFVPGSMESGVIHMDLDRSFLPVPSAVNASIF 182 QER+PAEVI ++MIGFS A+STL+ EFFVPGS ES +IHMDLDRSFLPVPSAVNAS+F Sbjct: 666 QERQPAEVIPQQMIGFSDPAVSTLKATEFFVPGSAESSIIHMDLDRSFLPVPSAVNASVF 725 Query: 183 ESFVRQNITDSETDVRSSIQQLVKDSYGFSAGGASEIIYGNTCLALFNKLVLCCMQEQGT 362 ESFVRQNITDSETDVRSSIQQLVKDSYG SA G +EIIYGNT +ALFNKLVLCCMQEQGT Sbjct: 726 ESFVRQNITDSETDVRSSIQQLVKDSYGLSAAGCAEIIYGNTSVALFNKLVLCCMQEQGT 785 Query: 363 LLFPLGTNGHYVNAAKFVNATTLTIPTKADSGFKIEPSALADTLEKVSQ 509 LLFPLGTNGHYV+AAKFVNA+T+TIPT SGF+IEP LADTL+ VS+ Sbjct: 786 LLFPLGTNGHYVSAAKFVNASTVTIPTNPSSGFRIEPKVLADTLKNVSR 834
>MMT1_ARATH (Q9LTB2) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met| S-methyltransferase) Length = 1071 Score = 172 bits (436), Expect = 5e-43 Identities = 86/168 (51%), Positives = 116/168 (69%) Frame = +3 Query: 6 EREPAEVISKEMIGFSSSAMSTLEGAEFFVPGSMESGVIHMDLDRSFLPVPSAVNASIFE 185 ERE + S+E+IGFSSSA+S L+ AE V E+ +IHMD+D+SFL +P +V A+IFE Sbjct: 657 ERESEKAKSEEIIGFSSSAVSILKDAELSVTEIDETSLIHMDVDQSFLQIPQSVKAAIFE 716 Query: 186 SFVRQNITDSETDVRSSIQQLVKDSYGFSAGGASEIIYGNTCLALFNKLVLCCMQEQGTL 365 SFVRQNI+++E D+ SI+Q V +YGF ++ +Y + LALFNKLV+CC QE GTL Sbjct: 717 SFVRQNISEAEVDINPSIKQFVWSNYGFPTKSSTGFVYADGSLALFNKLVICCAQEGGTL 776 Query: 366 LFPLGTNGHYVNAAKFVNATTLTIPTKADSGFKIEPSALADTLEKVSQ 509 P GTNG+YV AAKF+ A + IPT++ GFK+ L LE V + Sbjct: 777 CLPAGTNGNYVAAAKFLKANVVNIPTESSDGFKLTEKTLTKALESVKK 824
>MMT1_WOLBI (Q9SWR3) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met| S-methyltransferase) Length = 1088 Score = 162 bits (409), Expect = 6e-40 Identities = 80/167 (47%), Positives = 116/167 (69%) Frame = +3 Query: 3 QEREPAEVISKEMIGFSSSAMSTLEGAEFFVPGSMESGVIHMDLDRSFLPVPSAVNASIF 182 +E E E +MIGFSSSA+S L +E V + +S ++HMD+D+ FLP P+ V A+IF Sbjct: 668 REAENVEASDIDMIGFSSSAISVLSQSELSVRVTEKSSLLHMDVDQIFLPTPTPVKAAIF 727 Query: 183 ESFVRQNITDSETDVRSSIQQLVKDSYGFSAGGASEIIYGNTCLALFNKLVLCCMQEQGT 362 ESF RQN+T++E DV ++Q + +++ FS ++E IY + LALFNKLVLCC++E G+ Sbjct: 728 ESFARQNVTETECDVTPILRQFILNTWNFSVEHSAEFIYADFPLALFNKLVLCCIEEGGS 787 Query: 363 LLFPLGTNGHYVNAAKFVNATTLTIPTKADSGFKIEPSALADTLEKV 503 L P G+NG+Y AAKF+NA ++IPT+A+ GFK+ L+ LE V Sbjct: 788 LCMPAGSNGNYAAAAKFLNANIMSIPTEAEVGFKLTAKQLSSVLETV 834
>HIS8_BURCE (Q845V2) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 364 Score = 33.5 bits (75), Expect = 0.34 Identities = 27/146 (18%), Positives = 64/146 (43%) Frame = +3 Query: 15 PAEVISKEMIGFSSSAMSTLEGAEFFVPGSMESGVIHMDLDRSFLPVPSAVNASIFESFV 194 P ++I ++++ +S + VP + SG + +D + P+P + A++ E Sbjct: 11 PQDIIRRDVLAMTS----------YPVPDA--SGFVKLDAMENPYPLPEPLAAALGERLA 58 Query: 195 RQNITDSETDVRSSIQQLVKDSYGFSAGGASEIIYGNTCLALFNKLVLCCMQEQGTLLFP 374 R + +++ ++ + G G +++ GN + + + + C + +L P Sbjct: 59 RVALNRYPAPRPAALLDKLRHAMGVP--GTCDVLLGNGSDEIISMISVACAKPGAKVLAP 116 Query: 375 LGTNGHYVNAAKFVNATTLTIPTKAD 452 + Y +A+F + +P KAD Sbjct: 117 VPGFVMYELSARFAQLDFVGVPLKAD 142
>POLR_ASGVP (P36309) Genome polyprotein (241 kDa polyprotein) (ORF1 polyprotein)| [Contains: Putative RNA-directed RNA polymerase/Helicase (EC 2.7.7.48) (EC 3.6.1.-); Coat protein] Length = 2105 Score = 33.5 bits (75), Expect = 0.34 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 1/82 (1%) Frame = +2 Query: 263 WFLSRRCF*NYIREHLSRALQQACSLLHARTGHLAFPL-GNQRALCQRSKVCECNHLDYS 439 W RCF + + H + L++ CS + GH FPL G Q C++ + + L+ Sbjct: 1807 WIADPRCF--WKKVHQTCTLKRDCSEVTRLEGHAQFPLKGGQTQGCKKREDLGPSRLELK 1864 Query: 440 NEGRFRLQDRTKCSSRHTREGV 505 + + L+D + + RH R GV Sbjct: 1865 DLEKMSLEDVLQQARRH-RVGV 1885
>MOV10_MOUSE (P23249) Putative helicase MOV-10 (EC 3.6.1.-) (Moloney leukemia| virus 10 protein) Length = 1004 Score = 30.4 bits (67), Expect = 2.9 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%) Frame = +3 Query: 180 FESFVRQNITDSETD---VRSSIQQLVKDSYGFSAGGASEIIYG 302 FESF+ + D ETD +R+ K SYG A G S ++YG Sbjct: 17 FESFLAERGLDLETDRERLRTIYNHDFKPSYGTPAPGFSSMLYG 60
>CEA8_ECOLI (P09882) Colicin-E8 (EC 3.1.-.-) (Fragment)| Length = 205 Score = 29.3 bits (64), Expect = 6.5 Identities = 12/34 (35%), Positives = 22/34 (64%) Frame = -2 Query: 239 NAGTDISFRISDVLTNKTFENGGVYCRRYWQEAA 138 ++G I RI+D L +K F+N + R++W+E + Sbjct: 100 DSGAPIPDRIADKLRDKEFKNFDDFRRKFWEEVS 133
>MYST4_HUMAN (Q8WYB5) Histone acetyltransferase MYST4 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 4) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 4) (Histone acetyltransferase MOZ2) (Monocytic leukemia zinc finger protein-related factor) (Histone acetyltransferas Length = 2073 Score = 29.3 bits (64), Expect = 6.5 Identities = 14/56 (25%), Positives = 26/56 (46%) Frame = -3 Query: 178 MEAFTAEGTGKKLRSRSICMTPDSMEPGTKNSAPSRVDIAELENPIISLDITSAGS 11 M AFT G+ + + +C TP S + + SR+ + + P + IT+ + Sbjct: 363 MNAFTGRGSPGRGQKTKVCTTPSSGHAASGKDSSSRLAVTDPTRPGATTKITTTST 418
>LIPH_HUMAN (P11150) Hepatic triacylglycerol lipase precursor (EC 3.1.1.3)| (Hepatic lipase) (HL) Length = 499 Score = 29.3 bits (64), Expect = 6.5 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 4/38 (10%) Frame = +2 Query: 335 SLLHARTGHLAFPLGN----QRALCQRSKVCECNHLDY 436 SLLHA T +A+P G+ + LC K CN L Y Sbjct: 289 SLLHAGTQSMAYPCGDMNSFSQGLCLSCKKGRCNTLGY 326
>CBIO2_TREDE (Q73P93) Putative cobalt import ATP-binding protein cbiO 2| Length = 491 Score = 29.3 bits (64), Expect = 6.5 Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 11/89 (12%) Frame = +3 Query: 225 VRSSIQQLVKDSYGFSAGGAS---EIIYGNTCL--------ALFNKLVLCCMQEQGTLLF 371 VRS V + F G S +++ GN L + KL L +QEQ Sbjct: 335 VRSKTAGYVMQNVDFQLFGCSVYDDLLLGNEALPDKENRIQTVLEKLSLSALQEQHPTTL 394 Query: 372 PLGTNGHYVNAAKFVNATTLTIPTKADSG 458 +G V AA F+ LTI + SG Sbjct: 395 SMGQKQRLVVAASFLQNKRLTIFDEPTSG 423
>HIS82_BURP1 (Q3JMZ7) Histidinol-phosphate aminotransferase 2 (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase 2) Length = 356 Score = 28.9 bits (63), Expect = 8.5 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Frame = +3 Query: 282 ASEIIYGNTCLALFNKLVLCCMQEQGTLLFPLGTNGHYVNAAKFVNATTLTIPTKADSGF 461 A +++ GN L + L + C + +L P+ Y +AKF + +P +AD Sbjct: 79 ACDVLLGNGSDELISMLAMACAKPGAKVLAPVPGFVMYELSAKFAQLEFVGVPLRADLTL 138 Query: 462 KIEP--SALAD 488 I+ +ALA+ Sbjct: 139 DIDAMLAALAE 149
>T231F_BACTI (Q02404) Transposase for insertion sequence element IS231F| Length = 477 Score = 28.9 bits (63), Expect = 8.5 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 17/82 (20%) Frame = +2 Query: 311 SRALQQACSLLHARTGHLAFPLG-NQR-------------ALCQRSKVCECNHLD---YS 439 S L + CS LHA TG + P G N+R +L + K+CE ++ S Sbjct: 59 SDPLVRLCSRLHAVTGTVLSPEGLNKRFNEKSVLFLKHVFSLLLQQKICEQTYISNQLLS 118 Query: 440 NEGRFRLQDRTKCSSRHTREGV 505 + R R+ D T HT E + Sbjct: 119 HFKRIRIMDATMFQVPHTLEHI 140
>MY18A_HUMAN (Q92614) Myosin-18A (Myosin XVIIIa) (Myosin containing PDZ domain)| (Molecule associated with JAK3 N-terminus) (MAJN) Length = 2054 Score = 28.9 bits (63), Expect = 8.5 Identities = 14/44 (31%), Positives = 26/44 (59%) Frame = -3 Query: 139 RSRSICMTPDSMEPGTKNSAPSRVDIAELENPIISLDITSAGSL 8 R++++ M KNSAPS+ +IA+L+N + + T A ++ Sbjct: 1660 RTKALLADAQLMLDHLKNSAPSKREIAQLKNQLEESEFTCAAAV 1703
>Y1201_CAUCR (Q9A8Z4) Putative aldolase class 2 protein CC1201| Length = 257 Score = 28.9 bits (63), Expect = 8.5 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Frame = -1 Query: 288 QKHRLLRNHSYLS---PAAECWNGHQFQNQ*CSDEQNFRKWRRLLQKVLARSCGPD 130 +K +LRNH LS AAECW G F + C+ Q+V+A S G D Sbjct: 169 KKLLMLRNHGTLSVGATAAECWLGMFFLERACA------------QQVMALSIGRD 212 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,349,106 Number of Sequences: 219361 Number of extensions: 1565684 Number of successful extensions: 4487 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 4371 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4487 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3754426130 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
