ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags19d03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_193690.1| Oryza sativa (japonica cultivar-group), predic... 464 e-127
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 464 e-127
3dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic D... 464 e-127
4gb|AY108899.1| Zea mays PCO077673 mRNA sequence 90 1e-14
5ref|NM_170955.2| Caenorhabditis elegans Y105E8A.23 (Y105E8A.23) ... 42 2.1
6dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
7emb|AL132876.4|CEY105E8A Caenorhabditis elegans YAC Y105E8A, com... 42 2.1
8gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
9emb|AL732640.4|CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa... 42 2.1
10gb|AC132432.4| Mus musculus BAC clone RP23-213H1 from 7, complet... 42 2.1
11ref|NM_179465.1| Arabidopsis thaliana unknown protein AT1G52320 ... 40 8.4
12ref|NM_104111.2| Arabidopsis thaliana unknown protein AT1G52320 ... 40 8.4
13ref|NM_128391.2| Arabidopsis thaliana unknown protein AT2G28320 ... 40 8.4
14gb|AE017140.1| Yersinia pestis biovar Medievalis str. 91001 sect... 40 8.4
15gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Ph... 40 8.4
16gb|AC163748.6| Mus musculus BAC clone RP23-411N10 from chromosom... 40 8.4
17gb|AE009952.1| Yersinia pestis KIM, complete genome 40 8.4
18emb|AL583841.16| Human DNA sequence from clone RP11-556L2 on chr... 40 8.4
19gb|AY160680.2| Bartonella quintana dihydrolipoamide succinyltran... 40 8.4
20gb|BT000616.1| Arabidopsis thaliana probable bZIP protein (At1g... 40 8.4
21emb|CR628336.1| Legionella pneumophila str. Paris complete genome 40 8.4
22emb|CR378681.1| Photobacterium profundum SS9 chromosome 2; segme... 40 8.4
23emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, comp... 40 8.4
24emb|BX897700.1| Bartonella quintana str. Toulouse, complete genome 40 8.4
25emb|AJ414144.1| Yersinia pestis strain CO92 complete genome; seg... 40 8.4
26gb|AY140100.1| Arabidopsis thaliana unknown protein (At2g28320) ... 40 8.4
27ref|NM_011652.3| Mus musculus titin (Ttn), transcript variant N2... 40 8.4
28ref|NM_028004.2| Mus musculus titin (Ttn), transcript variant N2... 40 8.4
29gb|AC112723.3| Homo sapiens BAC clone RP11-785D16 from 2, comple... 40 8.4
30gb|AC006283.6| Arabidopsis thaliana chromosome 2 clone T1B3 map ... 40 8.4
31dbj|AK221442.1| Arabidopsis thaliana mRNA for bZIP protein, comp... 40 8.4
32gb|AY052306.1| Arabidopsis thaliana At1g52320/F19K6_7 mRNA, comp... 40 8.4
33dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
34emb|BX820626.1|CNS0AAFE Arabidopsis thaliana Full-length cDNA Co... 40 8.4
35gb|AC110087.2| Homo sapiens BAC clone RP11-662P10 from 2, comple... 40 8.4
36gb|AC037424.10|AC037424 Arabidopsis thaliana chromosome 1 BAC F1... 40 8.4
37ref|XM_575156.1| PREDICTED: Rattus norvegicus similar to titin i... 40 8.4
38dbj|AP004180.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
39dbj|AP004136.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
40dbj|AK065673.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.4
41emb|AL831715.7| Mouse DNA sequence from clone RP23-48E15 on chro... 40 8.4
42emb|AL928789.4| Mouse DNA sequence from clone RP23-435F21 on chr... 40 8.4 
>ref|NM_193690.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2289

 Score =  464 bits (234), Expect = e-127
 Identities = 429/494 (86%)
 Strand = Plus / Plus

                                                                        
Query: 120  atggcaaacatgtggagttctatgcaccgtcaacacaagagccagtttttgatcatatcg 179
            |||||||||||||||||||||||||| | ||| || ||| | |||||  | |||||||| 
Sbjct: 1486 atggcaaacatgtggagttctatgcatcatcatcataagtggcagttggttatcatatca 1545

                                                                        
Query: 180  gggatcagagcttttgaggtaccgcctgttccaagggagacaactgatttgcattataag 239
            || || |||  ||||||||  || || |||||||| ||||||||||||  |||||| |||
Sbjct: 1546 ggaataagaaattttgaggctccaccggttccaagagagacaactgatcagcattacaag 1605

                                                                        
Query: 240  cagacctgtgagctacgtgacattgtcagggagtggcatatgcagtttgagaaacttatg 299
            ||||| ||||| || ||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 1606 cagacttgtgacctgcgtgacattgtcagggagtggcacatgcagtttgagaaactcatg 1665

                                                                        
Query: 300  gaccatcaaaaagggtacatcagagcactcaatgcatggttgaagcttaatctcatctcc 359
            |||||||| ||||||||||| |||||||| ||||||||| | |||||||| |||||| ||
Sbjct: 1666 gaccatcagaaagggtacattagagcactaaatgcatggctcaagcttaacctcatcccc 1725

                                                                        
Query: 360  atcgagagcaatctgaaggagaaagtatcctcccctccaaggcaggtggaaccacctatc 419
            ||||| |||||  ||||||||||||| || ||||| || |||| ||||||||||||||| 
Sbjct: 1726 atcgaaagcaacttgaaggagaaagtttcgtccccgcctaggctggtggaaccacctata 1785

                                                                        
Query: 420  aagaatctgctatatgcctggcacgaccagcttgagaggcttcctgttgaacttgccaaa 479
            ||  ||||||||||||||||||| ||||||||||| ||||||||  |||||||||| |||
Sbjct: 1786 aaagatctgctatatgcctggcatgaccagcttgaaaggcttccaattgaacttgcaaaa 1845

                                                                        
Query: 480  actgccattaaaagctttactgaagtcataagcaatattgtactgcttcaggaagaggaa 539
            |||||||| ||||| ||| ||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 1846 actgccatcaaaagttttgctgaagtcataagcaatattgtactacttcaggaagaagaa 1905

                                                                        
Query: 540  gtcagcctaaggcggaggtgtgaggaaactcgcagggatcttgaccgtaagagggcacag 599
            ||||  |||||| ||||||||||||||||||||||||||||  |||| || |  ||||||
Sbjct: 1906 gtcaatctaaggaggaggtgtgaggaaactcgcagggatctcaaccgaaaaaaagcacag 1965

                          
Query: 600  tttgaagactggca 613
            |||||||| |||||
Sbjct: 1966 tttgaagaatggca 1979



 Score =  145 bits (73), Expect = 2e-31
 Identities = 106/117 (90%)
 Strand = Plus / Plus

                                                                        
Query: 2    acttatgaaaattgattatcagaagaaggttgatctattgcataaacaaaagaaacgtgg 61
            |||||||||||||||||||||||||||||| |  ||| | ||||||||||||||||||||
Sbjct: 1269 acttatgaaaattgattatcagaagaaggtagccctacttcataaacaaaagaaacgtgg 1328

                                                                     
Query: 62   tgttaaacttgaaactcttgagaagacaaaggccgccgttagccacttgcacacaag 118
            ||| ||||| ||||| ||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 1329 tgtgaaactcgaaacccttgagaagactaaggctgctgttagccacttgcacacaag 1385
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  464 bits (234), Expect = e-127
 Identities = 429/494 (86%)
 Strand = Plus / Minus

                                                                            
Query: 120      atggcaaacatgtggagttctatgcaccgtcaacacaagagccagtttttgatcatatcg 179
                |||||||||||||||||||||||||| | ||| || ||| | |||||  | |||||||| 
Sbjct: 17263307 atggcaaacatgtggagttctatgcatcatcatcataagtggcagttggttatcatatca 17263248

                                                                            
Query: 180      gggatcagagcttttgaggtaccgcctgttccaagggagacaactgatttgcattataag 239
                || || |||  ||||||||  || || |||||||| ||||||||||||  |||||| |||
Sbjct: 17263247 ggaataagaaattttgaggctccaccggttccaagagagacaactgatcagcattacaag 17263188

                                                                            
Query: 240      cagacctgtgagctacgtgacattgtcagggagtggcatatgcagtttgagaaacttatg 299
                ||||| ||||| || ||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 17263187 cagacttgtgacctgcgtgacattgtcagggagtggcacatgcagtttgagaaactcatg 17263128

                                                                            
Query: 300      gaccatcaaaaagggtacatcagagcactcaatgcatggttgaagcttaatctcatctcc 359
                |||||||| ||||||||||| |||||||| ||||||||| | |||||||| |||||| ||
Sbjct: 17263127 gaccatcagaaagggtacattagagcactaaatgcatggctcaagcttaacctcatcccc 17263068

                                                                            
Query: 360      atcgagagcaatctgaaggagaaagtatcctcccctccaaggcaggtggaaccacctatc 419
                ||||| |||||  ||||||||||||| || ||||| || |||| ||||||||||||||| 
Sbjct: 17263067 atcgaaagcaacttgaaggagaaagtttcgtccccgcctaggctggtggaaccacctata 17263008

                                                                            
Query: 420      aagaatctgctatatgcctggcacgaccagcttgagaggcttcctgttgaacttgccaaa 479
                ||  ||||||||||||||||||| ||||||||||| ||||||||  |||||||||| |||
Sbjct: 17263007 aaagatctgctatatgcctggcatgaccagcttgaaaggcttccaattgaacttgcaaaa 17262948

                                                                            
Query: 480      actgccattaaaagctttactgaagtcataagcaatattgtactgcttcaggaagaggaa 539
                |||||||| ||||| ||| ||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 17262947 actgccatcaaaagttttgctgaagtcataagcaatattgtactacttcaggaagaagaa 17262888

                                                                            
Query: 540      gtcagcctaaggcggaggtgtgaggaaactcgcagggatcttgaccgtaagagggcacag 599
                ||||  |||||| ||||||||||||||||||||||||||||  |||| || |  ||||||
Sbjct: 17262887 gtcaatctaaggaggaggtgtgaggaaactcgcagggatctcaaccgaaaaaaagcacag 17262828

                              
Query: 600      tttgaagactggca 613
                |||||||| |||||
Sbjct: 17262827 tttgaagaatggca 17262814



 Score =  145 bits (73), Expect = 2e-31
 Identities = 106/117 (90%)
 Strand = Plus / Minus

                                                                            
Query: 2        acttatgaaaattgattatcagaagaaggttgatctattgcataaacaaaagaaacgtgg 61
                |||||||||||||||||||||||||||||| |  ||| | ||||||||||||||||||||
Sbjct: 17265945 acttatgaaaattgattatcagaagaaggtagccctacttcataaacaaaagaaacgtgg 17265886

                                                                         
Query: 62       tgttaaacttgaaactcttgagaagacaaaggccgccgttagccacttgcacacaag 118
                ||| ||||| ||||| ||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 17265885 tgtgaaactcgaaacccttgagaagactaaggctgctgttagccacttgcacacaag 17265829
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>dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1080D07
          Length = 173856

 Score =  464 bits (234), Expect = e-127
 Identities = 429/494 (86%)
 Strand = Plus / Minus

                                                                         
Query: 120   atggcaaacatgtggagttctatgcaccgtcaacacaagagccagtttttgatcatatcg 179
             |||||||||||||||||||||||||| | ||| || ||| | |||||  | |||||||| 
Sbjct: 29568 atggcaaacatgtggagttctatgcatcatcatcataagtggcagttggttatcatatca 29509

                                                                         
Query: 180   gggatcagagcttttgaggtaccgcctgttccaagggagacaactgatttgcattataag 239
             || || |||  ||||||||  || || |||||||| ||||||||||||  |||||| |||
Sbjct: 29508 ggaataagaaattttgaggctccaccggttccaagagagacaactgatcagcattacaag 29449

                                                                         
Query: 240   cagacctgtgagctacgtgacattgtcagggagtggcatatgcagtttgagaaacttatg 299
             ||||| ||||| || ||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 29448 cagacttgtgacctgcgtgacattgtcagggagtggcacatgcagtttgagaaactcatg 29389

                                                                         
Query: 300   gaccatcaaaaagggtacatcagagcactcaatgcatggttgaagcttaatctcatctcc 359
             |||||||| ||||||||||| |||||||| ||||||||| | |||||||| |||||| ||
Sbjct: 29388 gaccatcagaaagggtacattagagcactaaatgcatggctcaagcttaacctcatcccc 29329

                                                                         
Query: 360   atcgagagcaatctgaaggagaaagtatcctcccctccaaggcaggtggaaccacctatc 419
             ||||| |||||  ||||||||||||| || ||||| || |||| ||||||||||||||| 
Sbjct: 29328 atcgaaagcaacttgaaggagaaagtttcgtccccgcctaggctggtggaaccacctata 29269

                                                                         
Query: 420   aagaatctgctatatgcctggcacgaccagcttgagaggcttcctgttgaacttgccaaa 479
             ||  ||||||||||||||||||| ||||||||||| ||||||||  |||||||||| |||
Sbjct: 29268 aaagatctgctatatgcctggcatgaccagcttgaaaggcttccaattgaacttgcaaaa 29209

                                                                         
Query: 480   actgccattaaaagctttactgaagtcataagcaatattgtactgcttcaggaagaggaa 539
             |||||||| ||||| ||| ||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 29208 actgccatcaaaagttttgctgaagtcataagcaatattgtactacttcaggaagaagaa 29149

                                                                         
Query: 540   gtcagcctaaggcggaggtgtgaggaaactcgcagggatcttgaccgtaagagggcacag 599
             ||||  |||||| ||||||||||||||||||||||||||||  |||| || |  ||||||
Sbjct: 29148 gtcaatctaaggaggaggtgtgaggaaactcgcagggatctcaaccgaaaaaaagcacag 29089

                           
Query: 600   tttgaagactggca 613
             |||||||| |||||
Sbjct: 29088 tttgaagaatggca 29075



 Score =  145 bits (73), Expect = 2e-31
 Identities = 106/117 (90%)
 Strand = Plus / Minus

                                                                         
Query: 2     acttatgaaaattgattatcagaagaaggttgatctattgcataaacaaaagaaacgtgg 61
             |||||||||||||||||||||||||||||| |  ||| | ||||||||||||||||||||
Sbjct: 32206 acttatgaaaattgattatcagaagaaggtagccctacttcataaacaaaagaaacgtgg 32147

                                                                      
Query: 62    tgttaaacttgaaactcttgagaagacaaaggccgccgttagccacttgcacacaag 118
             ||| ||||| ||||| ||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 32146 tgtgaaactcgaaacccttgagaagactaaggctgctgttagccacttgcacacaag 32090
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>gb|AY108899.1| Zea mays PCO077673 mRNA sequence
          Length = 561

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Plus

                                                                       
Query: 527 tcaggaagaggaagtcagcctaaggcggaggtgtgaggaaactcgcagggatcttgaccg 586
           ||||||||||||||| | ||||||| || ||||||| |||||||| ||||||||  ||||
Sbjct: 1   tcaggaagaggaagtaaacctaaggaggcggtgtgatgaaactcgtagggatctgaaccg 60

                                        
Query: 587 taagagggcacagtttgaagactggcatc 615
            |||| |||||||||||| ||||||||||
Sbjct: 61  aaagaaggcacagtttgaggactggcatc 89
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>ref|NM_170955.2| Caenorhabditis elegans Y105E8A.23 (Y105E8A.23) mRNA, complete cds
          Length = 2928

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 41  gcataaacaaaagaaacgtgg 61
           |||||||||||||||||||||
Sbjct: 171 gcataaacaaaagaaacgtgg 191
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 388      cctcccctccaaggcaggtgg 408
                |||||||||||||||||||||
Sbjct: 22473541 cctcccctccaaggcaggtgg 22473561
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>emb|AL132876.4|CEY105E8A Caenorhabditis elegans YAC Y105E8A, complete sequence
          Length = 277607

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 41     gcataaacaaaagaaacgtgg 61
              |||||||||||||||||||||
Sbjct: 232250 gcataaacaaaagaaacgtgg 232230
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 388      cctcccctccaaggcaggtgg 408
                |||||||||||||||||||||
Sbjct: 22401886 cctcccctccaaggcaggtgg 22401906
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>emb|AL732640.4|CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa0022K16 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 183414

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 388   cctcccctccaaggcaggtgg 408
             |||||||||||||||||||||
Sbjct: 33993 cctcccctccaaggcaggtgg 33973
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>gb|AC132432.4| Mus musculus BAC clone RP23-213H1 from 7, complete sequence
          Length = 198307

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 527   tcaggaagaggaagtcagcct 547
             |||||||||||||||||||||
Sbjct: 84737 tcaggaagaggaagtcagcct 84757
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>ref|NM_179465.1| Arabidopsis thaliana unknown protein AT1G52320 transcript variant
           AT1G52320.2 mRNA, complete cds
          Length = 1322

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 342 aagcttaatctcatctccatcgagagcaatctgaaggagaaagtatcctcccctcc 397
           ||||| ||||||||| | ||||| ||||  || |||||||||||||| || |||||
Sbjct: 598 aagctaaatctcatccctatcgaaagcacactcaaggagaaagtatcttcgcctcc 653
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>ref|NM_104111.2| Arabidopsis thaliana unknown protein AT1G52320 transcript variant
           AT1G52320.1 mRNA, complete cds
          Length = 1532

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 342 aagcttaatctcatctccatcgagagcaatctgaaggagaaagtatcctcccctcc 397
           ||||| ||||||||| | ||||| ||||  || |||||||||||||| || |||||
Sbjct: 658 aagctaaatctcatccctatcgaaagcacactcaaggagaaagtatcttcgcctcc 713
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>ref|NM_128391.2| Arabidopsis thaliana unknown protein AT2G28320 mRNA, complete cds
          Length = 2849

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 68  acttgaaactcttgagaaga 87
           ||||||||||||||||||||
Sbjct: 554 acttgaaactcttgagaaga 535
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>gb|AE017140.1| Yersinia pestis biovar Medievalis str. 91001 section 14 of 16 of the
              complete genome
          Length = 290393

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 527    tcaggaagaggaagtcagcc 546
              ||||||||||||||||||||
Sbjct: 231653 tcaggaagaggaagtcagcc 231672
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>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete
              genome
          Length = 3397754

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 343    agcttaatctcatctccatc 362
              ||||||||||||||||||||
Sbjct: 984906 agcttaatctcatctccatc 984887
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>gb|AC163748.6| Mus musculus BAC clone RP23-411N10 from chromosome 9, complete sequence
          Length = 226254

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 391    cccctccaaggcaggtggaaccac 414
              ||||||||||||||||||| ||||
Sbjct: 204336 cccctccaaggcaggtggagccac 204313
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>gb|AE009952.1| Yersinia pestis KIM, complete genome
          Length = 4600755

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 527     tcaggaagaggaagtcagcc 546
               ||||||||||||||||||||
Sbjct: 3538974 tcaggaagaggaagtcagcc 3538993
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>emb|AL583841.16| Human DNA sequence from clone RP11-556L2 on chromosome 9 Contains part of
              the ROR2 gene for receptor tyrosine kinase-like orphan
              receptor, complete sequence
          Length = 192799

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     aaacaaaagaaacgtggtgt 64
              ||||||||||||||||||||
Sbjct: 136197 aaacaaaagaaacgtggtgt 136216
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>gb|AY160680.2| Bartonella quintana dihydrolipoamide succinyltransferase (sucB)
           gene, complete cds
          Length = 1235

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 49  aaaagaaacgtggtgttaaacttg 72
           ||||||||| ||||||||||||||
Sbjct: 689 aaaagaaacatggtgttaaacttg 712
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>gb|BT000616.1| Arabidopsis thaliana probable bZIP protein  (At1g52320/F19K6_7)
           mRNA, complete cds
          Length = 1197

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 342 aagcttaatctcatctccatcgagagcaatctgaaggagaaagtatcctcccctcc 397
           ||||| ||||||||| | ||||| ||||  || |||||||||||||| || |||||
Sbjct: 598 aagctaaatctcatccctatcgaaagcacactcaaggagaaagtatcttcgcctcc 653
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>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 343     agcttaatctcatctccatc 362
               ||||||||||||||||||||
Sbjct: 1077564 agcttaatctcatctccatc 1077545
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>emb|CR378681.1| Photobacterium profundum SS9 chromosome 2; segment 7/7
          Length = 147669

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    ttgcataaacaaaagaaacg 58
             ||||||||||||||||||||
Sbjct: 64765 ttgcataaacaaaagaaacg 64746
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>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence
          Length = 4744671

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 527     tcaggaagaggaagtcagcc 546
               ||||||||||||||||||||
Sbjct: 3627066 tcaggaagaggaagtcagcc 3627085
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>emb|BX897700.1| Bartonella quintana str. Toulouse, complete genome
          Length = 1581384

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 49      aaaagaaacgtggtgttaaacttg 72
               ||||||||| ||||||||||||||
Sbjct: 1559081 aaaagaaacatggtgttaaacttg 1559058
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>emb|AJ414144.1| Yersinia pestis strain CO92 complete genome; segment 4/20
          Length = 208050

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 527    tcaggaagaggaagtcagcc 546
              ||||||||||||||||||||
Sbjct: 205950 tcaggaagaggaagtcagcc 205969
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>gb|AY140100.1| Arabidopsis thaliana unknown protein (At2g28320) mRNA, complete cds
          Length = 2802

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 68  acttgaaactcttgagaaga 87
           ||||||||||||||||||||
Sbjct: 554 acttgaaactcttgagaaga 535
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>ref|NM_011652.3| Mus musculus titin (Ttn), transcript variant N2-A, mRNA
          Length = 101674

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    ctcttgagaagacaaaggcc 95
             ||||||||||||||||||||
Sbjct: 50976 ctcttgagaagacaaaggcc 50995
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>ref|NM_028004.2| Mus musculus titin (Ttn), transcript variant N2-B, mRNA
          Length = 81931

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    ctcttgagaagacaaaggcc 95
             ||||||||||||||||||||
Sbjct: 31233 ctcttgagaagacaaaggcc 31252
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>gb|AC112723.3| Homo sapiens BAC clone RP11-785D16 from 2, complete sequence
          Length = 144552

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 389   ctcccctccaaggcaggtgg 408
             ||||||||||||||||||||
Sbjct: 92677 ctcccctccaaggcaggtgg 92696
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>gb|AC006283.6| Arabidopsis thaliana chromosome 2 clone T1B3 map mi54, complete
             sequence
          Length = 93122

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    acttgaaactcttgagaaga 87
             ||||||||||||||||||||
Sbjct: 75208 acttgaaactcttgagaaga 75227
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>dbj|AK221442.1| Arabidopsis thaliana mRNA for bZIP protein, complete cds, clone:
           RAFL06-73-C08
          Length = 1482

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 342 aagcttaatctcatctccatcgagagcaatctgaaggagaaagtatcctcccctcc 397
           ||||| ||||||||| | ||||| ||||  || |||||||||||||| || |||||
Sbjct: 659 aagctaaatctcatccctatcgaaagcacactcaaggagaaagtatcttcgcctcc 714
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>gb|AY052306.1| Arabidopsis thaliana At1g52320/F19K6_7 mRNA, complete cds
          Length = 1474

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 342 aagcttaatctcatctccatcgagagcaatctgaaggagaaagtatcctcccctcc 397
           ||||| ||||||||| | ||||| ||||  || |||||||||||||| || |||||
Sbjct: 658 aagctaaatctcatccctatcgaaagcacactcaaggagaaagtatcttcgcctcc 713
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 370      atctgaaggagaaagtatcctccc 393
                |||||||||||||||||| |||||
Sbjct: 14020820 atctgaaggagaaagtattctccc 14020797
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>emb|BX820626.1|CNS0AAFE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH53ZH09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2805

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 68  acttgaaactcttgagaaga 87
           ||||||||||||||||||||
Sbjct: 545 acttgaaactcttgagaaga 526
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>gb|AC110087.2| Homo sapiens BAC clone RP11-662P10 from 2, complete sequence
          Length = 88658

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     tatgaaaattgattatcaga 24
             ||||||||||||||||||||
Sbjct: 13182 tatgaaaattgattatcaga 13201
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>gb|AC037424.10|AC037424 Arabidopsis thaliana chromosome 1 BAC F19K6 genomic sequence, complete
             sequence
          Length = 75948

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                     
Query: 342   aagcttaatctcatctccatcgagagcaatctgaaggagaaagtatcctcccctcc 397
             ||||| ||||||||| | ||||| ||||  || |||||||||||||| || |||||
Sbjct: 46468 aagctaaatctcatccctatcgaaagcacactcaaggagaaagtatcttcgcctcc 46413
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>ref|XM_575156.1| PREDICTED: Rattus norvegicus similar to titin isoform N2-B
            (LOC499816), mRNA
          Length = 14448

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   ctcttgagaagacaaaggcc 95
            ||||||||||||||||||||
Sbjct: 7817 ctcttgagaagacaaaggcc 7836
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>dbj|AP004180.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1126_B05
          Length = 117057

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 370   atctgaaggagaaagtatcctccc 393
             |||||||||||||||||| |||||
Sbjct: 90458 atctgaaggagaaagtattctccc 90435
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>dbj|AP004136.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1287_H05
          Length = 97812

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 370  atctgaaggagaaagtatcctccc 393
            |||||||||||||||||| |||||
Sbjct: 2330 atctgaaggagaaagtattctccc 2307
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>dbj|AK065673.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035D19, full
           insert sequence
          Length = 1317

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 370 atctgaaggagaaagtatcctccc 393
           |||||||||||||||||| |||||
Sbjct: 447 atctgaaggagaaagtattctccc 470
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>emb|AL831715.7| Mouse DNA sequence from clone RP23-48E15 on chromosome X, complete
              sequence
          Length = 163675

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 373    tgaaggagaaagtatcctcc 392
              ||||||||||||||||||||
Sbjct: 140728 tgaaggagaaagtatcctcc 140747
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>emb|AL928789.4| Mouse DNA sequence from clone RP23-435F21 on chromosome 2, complete
             sequence
          Length = 202887

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    ctcttgagaagacaaaggcc 95
             ||||||||||||||||||||
Sbjct: 83114 ctcttgagaagacaaaggcc 83095


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,134,913
Number of Sequences: 3902068
Number of extensions: 6134913
Number of successful extensions: 145034
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 144672
Number of HSP's gapped (non-prelim): 362
length of query: 620
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 597
effective length of database: 17,143,297,704
effective search space: 10234548729288
effective search space used: 10234548729288
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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