Clone Name	bags18m23
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|BT009403.1| Triticum aestivum clone wlm96.pk047.l4:fis, full ...	436	e-119
2	gb|AF174486.1|AF174486 Zea mays methylenetetrahydrofolate reduct...	396	e-107
3	gb|AY109096.1| Zea mays PCO119715 mRNA sequence	396	e-107
4	ref|XM_470089.1| Oryza sativa (japonica cultivar-group), mRNA	325	7e-86
5	dbj|AK121351.1| Oryza sativa (japonica cultivar-group) cDNA clon...	325	7e-86
6	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	151	2e-33
7	gb|AC135594.4| Oryza sativa chromosome 3 BAC OSJNBa0024F18 genom...	151	2e-33
8	gb|AC139172.2| Oryza sativa chromosome 3 BAC OSJNBb0042K11 genom...	151	2e-33
9	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	151	2e-33
10	ref|NM_180393.1| Arabidopsis thaliana MTHFR1; methylenetetrahydr...	88	3e-14
11	ref|NM_115860.2| Arabidopsis thaliana MTHFR1; methylenetetrahydr...	88	3e-14
12	ref|NM_180392.1| Arabidopsis thaliana MTHFR1; methylenetetrahydr...	88	3e-14
13	gb|AY122922.1| Arabidopsis thaliana putative methylenetetrahydro...	88	3e-14
14	gb|AY070034.1| Arabidopsis thaliana putative methylenetetrahydro...	88	3e-14
15	gb|AF181966.1|AF181966 Arabidopsis thaliana methylenetetrahydrof...	88	3e-14
16	ref|NM_129979.2| Arabidopsis thaliana MTHFR2; methylenetetrahydr...	70	7e-09
17	emb|AJ245414.1|ATH245414 Arabidopsis thaliana mRNA for methylene...	70	7e-09
18	gb|AY050434.1| Arabidopsis thaliana At2g44160/F6E13.29 mRNA, com...	70	7e-09
19	gb|AF370515.1|AF370515 Arabidopsis thaliana putative methylenete...	70	7e-09
20	gb|AF181967.1|AF181967 Arabidopsis thaliana methylenetetrahydrof...	70	7e-09
21	gb|AC004005.3| Arabidopsis thaliana chromosome 2 clone F6E13 map...	62	2e-06
22	emb|AL138647.1|ATF24G16 Arabidopsis thaliana DNA chromosome 3, B...	60	7e-06
23	ref|XM_446274.1| Candida glabrata CBS138, CAGL0F07029g partial mRNA	44	0.41
24	emb|CR380952.1| Candida glabrata strain CBS138 chromosome F comp...	44	0.41
25	gb|AC128711.4| Homo sapiens 3 BAC RP11-70N22 (Roswell Park Cance...	42	1.6
26	gb|AC142271.3| Mus musculus chromosome 5 clone RP24-69A21, compl...	40	6.4
27	ref|XM_548399.2| PREDICTED: Canis familiaris similar to Retinoic...	40	6.4
28	ref|XM_853943.1| PREDICTED: Canis familiaris similar to Retinoic...	40	6.4
29	ref|XM_853908.1| PREDICTED: Canis familiaris similar to Retinoic...	40	6.4
30	ref|XM_853865.1| PREDICTED: Canis familiaris similar to Retinoic...	40	6.4
31	ref|XM_853824.1| PREDICTED: Canis familiaris similar to Retinoic...	40	6.4
32	ref|XM_853786.1| PREDICTED: Canis familiaris similar to Retinoic...	40	6.4
33	ref|XM_853747.1| PREDICTED: Canis familiaris similar to Retinoic...	40	6.4
34	ref|XM_853713.1| PREDICTED: Canis familiaris similar to Retinoic...	40	6.4
35	ref|XM_853674.1| PREDICTED: Canis familiaris similar to Retinoic...	40	6.4
36	ref|XM_853636.1| PREDICTED: Canis familiaris similar to Retinoic...	40	6.4
37	ref|XM_844316.1| PREDICTED: Canis familiaris similar to Retinoic...	40	6.4
38	ref|XM_853557.1| PREDICTED: Canis familiaris similar to Retinoic...	40	6.4
39	ref|XM_853467.1| PREDICTED: Canis familiaris similar to Retinoic...	40	6.4
40	ref|XM_853432.1| PREDICTED: Canis familiaris similar to Retinoic...	40	6.4
41	ref|XM_853396.1| PREDICTED: Canis familiaris similar to Retinoic...	40	6.4
42	emb|AL356292.21| Human DNA sequence from clone RP11-363I22 on ch...	40	6.4
43	dbj|AB205145.1| Epichloe festucae EF100, EF101, EF102, perA, EF1...	40	6.4
44	gb|AC084572.1|CBRG39K23 Caenorhabditis briggsae cosmid G39K23, c...	40	6.4
45	emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E ...	40	6.4

---

>gb|BT009403.1| Triticum aestivum clone wlm96.pk047.l4:fis, full insert mRNA
           sequence
          Length = 1653

 Score =  436 bits (220), Expect = e-119
 Identities = 271/290 (93%)
 Strand = Plus / Plus

                                                                       
Query: 184 cttgngctctagatctggtgcagcatattanagccaagtatggngattacttnggcataa 243
           |||| ||||||||||||||| |||| |||| |||||||||||| |||||||| |||||||
Sbjct: 8   cttgtgctctagatctggtggagcacattaaagccaagtatggtgattactttggcataa 67

                                                                       
Query: 244 ctgtcgctgggtatccagaggcacaccctgaggtaatactaggtgaggacggggctacag 303
           |||||||||| |||||||||||||||||||||||||||||||| ||||| || ||||| |
Sbjct: 68  ctgtcgctggctatccagaggcacaccctgaggtaatactaggcgaggaaggtgctacgg 127

                                                                       
Query: 304 aggaagcatatagcaaagatcttgcttacttgaagagaaaggttgatgctggcgctgacg 363
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 128 aggaagcatatagcaaagatcttgcttacttgaagagaaaggttgatgctggtgctgacg 187

                                                                       
Query: 364 ttatagttacccagcttttctatgataccgacatnttcctcaaatttgtgaacgatngcc 423
           ||||||| ||||||||||||||||||||||| || || ||||| |||||||||||  |||
Sbjct: 188 ttatagtcacccagcttttctatgataccgatatctttctcaagtttgtgaacgactgcc 247

                                                             
Query: 424 gtcagattggtataacctgccctatcgttcctggcataatgccaataaat 473
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gtcagattggtataacctgccctatcgttcctggcataatgccaataaat 297

---

>gb|AF174486.1|AF174486 Zea mays methylenetetrahydrofolate reductase mRNA, complete cds
          Length = 2225

 Score =  396 bits (200), Expect = e-107
 Identities = 403/473 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   accgcatgcanaacatggtatgcgtggaaacgatgatgcacttgacgtgcaccaacatgc 60
           |||| ||||| |||||||| || |||||||| ||||||||| |||| || || |||||||
Sbjct: 279 accgtatgcagaacatggtgtgtgtggaaaccatgatgcacctgacatgtacaaacatgc 338

                                                                       
Query: 61  cagtggagaagattgataatgctttggataccattaagaacaatgggattcaaaatgttc 120
           |||| |||||||||||  |||| ||||| ||||| ||   ||||||||||||||||||| 
Sbjct: 339 cagtagagaagattgaccatgccttggaaaccatcaaatccaatgggattcaaaatgttt 398

                                                                       
Query: 121 tcgcacttagaggagatcctccacatggtcaggacaaatttgtccaagttgctggtggat 180
           | || || ||||| |||||||||||||| || ||||||||||| |||||||  || ||||
Sbjct: 399 tggccctcagaggggatcctccacatgggcaagacaaatttgtgcaagttgaaggcggat 458

                                                                       
Query: 181 tttcttgngctctagatctggtgcagcatattanagccaagtatggngattacttnggca 240
           || |||| ||||| ||| ||||||||||||||| ||||||||| || ||||| || ||||
Sbjct: 459 ttgcttgtgctcttgatttggtgcagcatattagagccaagtacggtgattattttggca 518

                                                                       
Query: 241 taactgtcgctgggtatccagaggcacaccctgaggtaatactaggtgaggacggggcta 300
           ||||||| ||||| |||||||||||||||||||| |  |||| ||| ||||  || ||||
Sbjct: 519 taactgtagctggttatccagaggcacaccctgatgcgatacaaggcgagggaggtgcta 578

                                                                       
Query: 301 cagaggaagcatatagcaaagatcttgcttacttgaagagaaaggttgatgctggcgctg 360
           ||  ||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||
Sbjct: 579 cattggaagcatatagcaatgatcttgcgtacttgaagagaaaggttgatgctggtgctg 638

                                                                       
Query: 361 acgttatagttacccagcttttctatgataccgacatnttcctcaaatttgtgaacgatn 420
           || |||| ||||| || |||||||||||||||||||| || ||||| |||||||| ||  
Sbjct: 639 accttattgttacacaacttttctatgataccgacatctttctcaagtttgtgaatgact 698

                                                                
Query: 421 gccgtcagattggtataacctgccctatcgttcctggcataatgccaataaat 473
           |||| || |||||||| || || || || ||||||||||||||||||||||||
Sbjct: 699 gccgccaaattggtattacttgtcccattgttcctggcataatgccaataaat 751

---

>gb|AY109096.1| Zea mays PCO119715 mRNA sequence
          Length = 2423

 Score =  396 bits (200), Expect = e-107
 Identities = 403/473 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   accgcatgcanaacatggtatgcgtggaaacgatgatgcacttgacgtgcaccaacatgc 60
           |||| ||||| |||||||| || |||||||| ||||||||| |||| || || |||||||
Sbjct: 262 accgtatgcagaacatggtgtgtgtggaaaccatgatgcacctgacatgtacaaacatgc 321

                                                                       
Query: 61  cagtggagaagattgataatgctttggataccattaagaacaatgggattcaaaatgttc 120
           |||| |||||||||||  |||| ||||| ||||| ||   ||||||||||||||||||| 
Sbjct: 322 cagtagagaagattgaccatgccttggaaaccatcaaatccaatgggattcaaaatgttt 381

                                                                       
Query: 121 tcgcacttagaggagatcctccacatggtcaggacaaatttgtccaagttgctggtggat 180
           | || || ||||| |||||||||||||| || ||||||||||| |||||||  || ||||
Sbjct: 382 tggccctcagaggggatcctccacatgggcaagacaaatttgtgcaagttgaaggcggat 441

                                                                       
Query: 181 tttcttgngctctagatctggtgcagcatattanagccaagtatggngattacttnggca 240
           || |||| ||||| ||| ||||||||||||||| ||||||||| || ||||| || ||||
Sbjct: 442 ttgcttgtgctcttgatttggtgcagcatattagagccaagtacggtgattattttggca 501

                                                                       
Query: 241 taactgtcgctgggtatccagaggcacaccctgaggtaatactaggtgaggacggggcta 300
           ||||||| ||||| |||||||||||||||||||| |  |||| ||| ||||  || ||||
Sbjct: 502 taactgtagctggttatccagaggcacaccctgatgcgatacaaggcgagggaggtgcta 561

                                                                       
Query: 301 cagaggaagcatatagcaaagatcttgcttacttgaagagaaaggttgatgctggcgctg 360
           ||  ||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||
Sbjct: 562 cattggaagcatatagcaatgatcttgcgtacttgaagagaaaggttgatgctggtgctg 621

                                                                       
Query: 361 acgttatagttacccagcttttctatgataccgacatnttcctcaaatttgtgaacgatn 420
           || |||| ||||| || |||||||||||||||||||| || ||||| |||||||| ||  
Sbjct: 622 accttattgttacacaacttttctatgataccgacatctttctcaagtttgtgaatgact 681

                                                                
Query: 421 gccgtcagattggtataacctgccctatcgttcctggcataatgccaataaat 473
           |||| || |||||||| || || || || ||||||||||||||||||||||||
Sbjct: 682 gccgccaaattggtattacttgtcccattgttcctggcataatgccaataaat 734

---

>ref|XM_470089.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2167

 Score =  325 bits (164), Expect = 7e-86
 Identities = 394/473 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   accgcatgcanaacatggtatgcgtggaaacgatgatgcacttgacgtgcaccaacatgc 60
           |||| ||||| |||||||| || |||||||| ||||||||| |||| |||||||| ||||
Sbjct: 269 accggatgcagaacatggtgtgtgtggaaacaatgatgcacctgacatgcaccaatatgc 328

                                                                       
Query: 61  cagtggagaagattgataatgctttggataccattaagaacaatgggattcaaaatgttc 120
           |||| |||||||||||| |||| ||    || || |||   |||||||||||||||||||
Sbjct: 329 cagttgagaagattgatgatgccttaacaacaataaagtctaatgggattcaaaatgttc 388

                                                                       
Query: 121 tcgcacttagaggagatcctccacatggtcaggacaaatttgtccaagttgctggtggat 180
           | || ||||| || ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 389 tggctcttaggggtgatcctccacatggtcaggacaaatttgttcaagttgctggtggat 448

                                                                       
Query: 181 tttcttgngctctagatctggtgcagcatattanagccaagtatggngattacttnggca 240
           |  |||| ||||| ||| |||| || || |||| |||||||||||| ||||| || || |
Sbjct: 449 tcgcttgtgctcttgatttggtacaacacattagagccaagtatggtgattattttggta 508

                                                                       
Query: 241 taactgtcgctgggtatccagaggcacaccctgaggtaatactaggtgaggacggggcta 300
           | ||||| ||||| ||||||||||| ||||| || | ||||| | ||  ||| |||||||
Sbjct: 509 ttactgttgctggttatccagaggcccacccggatgcaatacaaagtacggaaggggcta 568

                                                                       
Query: 301 cagaggaagcatatagcaaagatcttgcttacttgaagagaaaggttgatgctggcgctg 360
           ||   |||||||| ||||| ||||||||||| ||||||  ||||||||||||||| ||||
Sbjct: 569 caccagaagcatacagcaatgatcttgcttatttgaagcaaaaggttgatgctggtgctg 628

                                                                       
Query: 361 acgttatagttacccagcttttctatgataccgacatnttcctcaaatttgtgaacgatn 420
           || ||||  |||| |||||||||||||| || || || || ||||| |||||||| ||  
Sbjct: 629 accttatcattacacagcttttctatgacactgatatctttctcaagtttgtgaatgact 688

                                                                
Query: 421 gccgtcagattggtataacctgccctatcgttcctggcataatgccaataaat 473
           |||| || ||||| ||||| ||||| || ||||||||||||||||| ||||||
Sbjct: 689 gccgccaaattggcataacttgccccattgttcctggcataatgcctataaat 741

---

>dbj|AK121351.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121O06, full
           insert sequence
          Length = 2169

 Score =  325 bits (164), Expect = 7e-86
 Identities = 394/473 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   accgcatgcanaacatggtatgcgtggaaacgatgatgcacttgacgtgcaccaacatgc 60
           |||| ||||| |||||||| || |||||||| ||||||||| |||| |||||||| ||||
Sbjct: 270 accggatgcagaacatggtgtgtgtggaaacaatgatgcacctgacatgcaccaatatgc 329

                                                                       
Query: 61  cagtggagaagattgataatgctttggataccattaagaacaatgggattcaaaatgttc 120
           |||| |||||||||||| |||| ||    || || |||   |||||||||||||||||||
Sbjct: 330 cagttgagaagattgatgatgccttaacaacaataaagtctaatgggattcaaaatgttc 389

                                                                       
Query: 121 tcgcacttagaggagatcctccacatggtcaggacaaatttgtccaagttgctggtggat 180
           | || ||||| || ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 390 tggctcttaggggtgatcctccacatggtcaggacaaatttgttcaagttgctggtggat 449

                                                                       
Query: 181 tttcttgngctctagatctggtgcagcatattanagccaagtatggngattacttnggca 240
           |  |||| ||||| ||| |||| || || |||| |||||||||||| ||||| || || |
Sbjct: 450 tcgcttgtgctcttgatttggtacaacacattagagccaagtatggtgattattttggta 509

                                                                       
Query: 241 taactgtcgctgggtatccagaggcacaccctgaggtaatactaggtgaggacggggcta 300
           | ||||| ||||| ||||||||||| ||||| || | ||||| | ||  ||| |||||||
Sbjct: 510 ttactgttgctggttatccagaggcccacccggatgcaatacaaagtacggaaggggcta 569

                                                                       
Query: 301 cagaggaagcatatagcaaagatcttgcttacttgaagagaaaggttgatgctggcgctg 360
           ||   |||||||| ||||| ||||||||||| ||||||  ||||||||||||||| ||||
Sbjct: 570 caccagaagcatacagcaatgatcttgcttatttgaagcaaaaggttgatgctggtgctg 629

                                                                       
Query: 361 acgttatagttacccagcttttctatgataccgacatnttcctcaaatttgtgaacgatn 420
           || ||||  |||| |||||||||||||| || || || || ||||| |||||||| ||  
Sbjct: 630 accttatcattacacagcttttctatgacactgatatctttctcaagtttgtgaatgact 689

                                                                
Query: 421 gccgtcagattggtataacctgccctatcgttcctggcataatgccaataaat 473
           |||| || ||||| ||||| ||||| || ||||||||||||||||| ||||||
Sbjct: 690 gccgccaaattggcataacttgccccattgttcctggcataatgcctataaat 742

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  151 bits (76), Expect = 2e-33
 Identities = 153/179 (85%)
 Strand = Plus / Minus

                                                                            
Query: 24       gtggaaacgatgatgcacttgacgtgcaccaacatgccagtggagaagattgataatgct 83
                |||||||| ||||||||| |||| |||||||| |||||||| |||||||||||| |||| 
Sbjct: 33867773 gtggaaacaatgatgcacctgacatgcaccaatatgccagttgagaagattgatgatgcc 33867714

                                                                            
Query: 84       ttggataccattaagaacaatgggattcaaaatgttctcgcacttagaggagatcctcca 143
                ||    || || |||   |||||||||||||||||||| || ||||| || |||||||||
Sbjct: 33867713 ttaacaacaataaagtctaatgggattcaaaatgttctggctcttaggggtgatcctcca 33867654

                                                                           
Query: 144      catggtcaggacaaatttgtccaagttgctggtggattttcttgngctctagatctggt 202
                |||||||||||||||||||| |||||||||||||||||  |||| ||||| ||| ||||
Sbjct: 33867653 catggtcaggacaaatttgttcaagttgctggtggattcgcttgtgctcttgatttggt 33867595



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 110/131 (83%)
 Strand = Plus / Minus

                                                                            
Query: 343      aggttgatgctggcgctgacgttatagttacccagcttttctatgataccgacatnttcc 402
                ||||||||||||| |||||| ||||  |||| |||||||||||||| || || || || |
Sbjct: 33867016 aggttgatgctggtgctgaccttatcattacacagcttttctatgacactgatatctttc 33866957

                                                                            
Query: 403      tcaaatttgtgaacgatngccgtcagattggtataacctgccctatcgttcctggcataa 462
                |||| |||||||| ||  |||| || ||||| ||||| ||||| || |||||||||||||
Sbjct: 33866956 tcaagtttgtgaatgactgccgccaaattggcataacttgccccattgttcctggcataa 33866897

                           
Query: 463      tgccaataaat 473
                |||| ||||||
Sbjct: 33866896 tgcctataaat 33866886



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                    
Query: 210      attanagccaagtatggngattacttnggcataactgtcgctgggtatccag 261
                |||| |||||||||||| ||||| || || || ||||| ||||| |||||||
Sbjct: 33867431 attagagccaagtatggtgattattttggtattactgttgctggttatccag 33867380



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 306      gaagcatatagcaaagatcttgcttacttgaagagaaaggtt 347
                |||||||| ||||| ||||||||||| ||||||  |||||||
Sbjct: 33867249 gaagcatacagcaatgatcttgcttatttgaagcaaaaggtt 33867208

---

>gb|AC135594.4| Oryza sativa chromosome 3 BAC OSJNBa0024F18 genomic sequence,
            complete sequence
          Length = 159795

 Score =  151 bits (76), Expect = 2e-33
 Identities = 153/179 (85%)
 Strand = Plus / Plus

                                                                        
Query: 24   gtggaaacgatgatgcacttgacgtgcaccaacatgccagtggagaagattgataatgct 83
            |||||||| ||||||||| |||| |||||||| |||||||| |||||||||||| |||| 
Sbjct: 5467 gtggaaacaatgatgcacctgacatgcaccaatatgccagttgagaagattgatgatgcc 5526

                                                                        
Query: 84   ttggataccattaagaacaatgggattcaaaatgttctcgcacttagaggagatcctcca 143
            ||    || || |||   |||||||||||||||||||| || ||||| || |||||||||
Sbjct: 5527 ttaacaacaataaagtctaatgggattcaaaatgttctggctcttaggggtgatcctcca 5586

                                                                       
Query: 144  catggtcaggacaaatttgtccaagttgctggtggattttcttgngctctagatctggt 202
            |||||||||||||||||||| |||||||||||||||||  |||| ||||| ||| ||||
Sbjct: 5587 catggtcaggacaaatttgttcaagttgctggtggattcgcttgtgctcttgatttggt 5645



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 110/131 (83%)
 Strand = Plus / Plus

                                                                        
Query: 343  aggttgatgctggcgctgacgttatagttacccagcttttctatgataccgacatnttcc 402
            ||||||||||||| |||||| ||||  |||| |||||||||||||| || || || || |
Sbjct: 6224 aggttgatgctggtgctgaccttatcattacacagcttttctatgacactgatatctttc 6283

                                                                        
Query: 403  tcaaatttgtgaacgatngccgtcagattggtataacctgccctatcgttcctggcataa 462
            |||| |||||||| ||  |||| || ||||| ||||| ||||| || |||||||||||||
Sbjct: 6284 tcaagtttgtgaatgactgccgccaaattggcataacttgccccattgttcctggcataa 6343

                       
Query: 463  tgccaataaat 473
            |||| ||||||
Sbjct: 6344 tgcctataaat 6354



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                
Query: 210  attanagccaagtatggngattacttnggcataactgtcgctgggtatccag 261
            |||| |||||||||||| ||||| || || || ||||| ||||| |||||||
Sbjct: 5809 attagagccaagtatggtgattattttggtattactgttgctggttatccag 5860



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 306  gaagcatatagcaaagatcttgcttacttgaagagaaaggtt 347
            |||||||| ||||| ||||||||||| ||||||  |||||||
Sbjct: 5991 gaagcatacagcaatgatcttgcttatttgaagcaaaaggtt 6032

---

>gb|AC139172.2| Oryza sativa chromosome 3 BAC OSJNBb0042K11 genomic sequence,
            complete sequence
          Length = 27024

 Score =  151 bits (76), Expect = 2e-33
 Identities = 153/179 (85%)
 Strand = Plus / Minus

                                                                        
Query: 24   gtggaaacgatgatgcacttgacgtgcaccaacatgccagtggagaagattgataatgct 83
            |||||||| ||||||||| |||| |||||||| |||||||| |||||||||||| |||| 
Sbjct: 1975 gtggaaacaatgatgcacctgacatgcaccaatatgccagttgagaagattgatgatgcc 1916

                                                                        
Query: 84   ttggataccattaagaacaatgggattcaaaatgttctcgcacttagaggagatcctcca 143
            ||    || || |||   |||||||||||||||||||| || ||||| || |||||||||
Sbjct: 1915 ttaacaacaataaagtctaatgggattcaaaatgttctggctcttaggggtgatcctcca 1856

                                                                       
Query: 144  catggtcaggacaaatttgtccaagttgctggtggattttcttgngctctagatctggt 202
            |||||||||||||||||||| |||||||||||||||||  |||| ||||| ||| ||||
Sbjct: 1855 catggtcaggacaaatttgttcaagttgctggtggattcgcttgtgctcttgatttggt 1797



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 110/131 (83%)
 Strand = Plus / Minus

                                                                        
Query: 343  aggttgatgctggcgctgacgttatagttacccagcttttctatgataccgacatnttcc 402
            ||||||||||||| |||||| ||||  |||| |||||||||||||| || || || || |
Sbjct: 1218 aggttgatgctggtgctgaccttatcattacacagcttttctatgacactgatatctttc 1159

                                                                        
Query: 403  tcaaatttgtgaacgatngccgtcagattggtataacctgccctatcgttcctggcataa 462
            |||| |||||||| ||  |||| || ||||| ||||| ||||| || |||||||||||||
Sbjct: 1158 tcaagtttgtgaatgactgccgccaaattggcataacttgccccattgttcctggcataa 1099

                       
Query: 463  tgccaataaat 473
            |||| ||||||
Sbjct: 1098 tgcctataaat 1088



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 210  attanagccaagtatggngattacttnggcataactgtcgctgggtatccag 261
            |||| |||||||||||| ||||| || || || ||||| ||||| |||||||
Sbjct: 1633 attagagccaagtatggtgattattttggtattactgttgctggttatccag 1582



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 306  gaagcatatagcaaagatcttgcttacttgaagagaaaggtt 347
            |||||||| ||||| ||||||||||| ||||||  |||||||
Sbjct: 1451 gaagcatacagcaatgatcttgcttatttgaagcaaaaggtt 1410

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  151 bits (76), Expect = 2e-33
 Identities = 153/179 (85%)
 Strand = Plus / Minus

                                                                            
Query: 24       gtggaaacgatgatgcacttgacgtgcaccaacatgccagtggagaagattgataatgct 83
                |||||||| ||||||||| |||| |||||||| |||||||| |||||||||||| |||| 
Sbjct: 33958245 gtggaaacaatgatgcacctgacatgcaccaatatgccagttgagaagattgatgatgcc 33958186

                                                                            
Query: 84       ttggataccattaagaacaatgggattcaaaatgttctcgcacttagaggagatcctcca 143
                ||    || || |||   |||||||||||||||||||| || ||||| || |||||||||
Sbjct: 33958185 ttaacaacaataaagtctaatgggattcaaaatgttctggctcttaggggtgatcctcca 33958126

                                                                           
Query: 144      catggtcaggacaaatttgtccaagttgctggtggattttcttgngctctagatctggt 202
                |||||||||||||||||||| |||||||||||||||||  |||| ||||| ||| ||||
Sbjct: 33958125 catggtcaggacaaatttgttcaagttgctggtggattcgcttgtgctcttgatttggt 33958067



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 110/131 (83%)
 Strand = Plus / Minus

                                                                            
Query: 343      aggttgatgctggcgctgacgttatagttacccagcttttctatgataccgacatnttcc 402
                ||||||||||||| |||||| ||||  |||| |||||||||||||| || || || || |
Sbjct: 33957488 aggttgatgctggtgctgaccttatcattacacagcttttctatgacactgatatctttc 33957429

                                                                            
Query: 403      tcaaatttgtgaacgatngccgtcagattggtataacctgccctatcgttcctggcataa 462
                |||| |||||||| ||  |||| || ||||| ||||| ||||| || |||||||||||||
Sbjct: 33957428 tcaagtttgtgaatgactgccgccaaattggcataacttgccccattgttcctggcataa 33957369

                           
Query: 463      tgccaataaat 473
                |||| ||||||
Sbjct: 33957368 tgcctataaat 33957358



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                    
Query: 210      attanagccaagtatggngattacttnggcataactgtcgctgggtatccag 261
                |||| |||||||||||| ||||| || || || ||||| ||||| |||||||
Sbjct: 33957903 attagagccaagtatggtgattattttggtattactgttgctggttatccag 33957852



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 306      gaagcatatagcaaagatcttgcttacttgaagagaaaggtt 347
                |||||||| ||||| ||||||||||| ||||||  |||||||
Sbjct: 33957721 gaagcatacagcaatgatcttgcttatttgaagcaaaaggtt 33957680

---

>ref|NM_180393.1| Arabidopsis thaliana MTHFR1; methylenetetrahydrofolate reductase
           (NADPH) AT3G59970 (MTHFR1) transcript variant
           AT3G59970.2 mRNA, complete cds
          Length = 1708

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                       
Query: 321 gatcttgcttacttgaagagaaaggttgatgctggcgctgacgttatagttacccagctt 380
           ||||||||||||||||||| ||||||||||||||| || ||  | || || || ||||||
Sbjct: 605 gatcttgcttacttgaagaaaaaggttgatgctggagcagatttgattgtgactcagctt 664

                                              
Query: 381 ttctatgataccgacatnttcctcaaatttgtgaa 415
           ||||||||||| || || |||||||| ||||||||
Sbjct: 665 ttctatgatactgatatattcctcaagtttgtgaa 699



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 130/164 (79%)
 Strand = Plus / Plus

                                                                       
Query: 102 aatgggattcaaaatgttctcgcacttagaggagatcctccacatggtcaggacaaattt 161
           ||||| ||||| ||||| || || ||||||||||||||||| ||||| || || || |||
Sbjct: 386 aatggaattcagaatgtgcttgctcttagaggagatcctcctcatggacaagataagttt 445

                                                                       
Query: 162 gtccaagttgctggtggattttcttgngctctagatctggtgcagcatattanagccaag 221
           || || ||||  || |||||| |||| ||| | ||||||||| | || |||     ||||
Sbjct: 446 gttcaggttgaaggaggatttgcttgtgctttggatctggtgaatcacattcgtagcaag 505

                                                       
Query: 222 tatggngattacttnggcataactgtcgctgggtatccagaggc 265
           ||||| |||||||| || || ||||| ||||| ||||| |||||
Sbjct: 506 tatggtgattactttggaatcactgttgctggttatcctgaggc 549

---

>ref|NM_115860.2| Arabidopsis thaliana MTHFR1; methylenetetrahydrofolate reductase
           (NADPH) AT3G59970 (MTHFR1) transcript variant
           AT3G59970.3 mRNA, complete cds
          Length = 2021

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                       
Query: 321 gatcttgcttacttgaagagaaaggttgatgctggcgctgacgttatagttacccagctt 380
           ||||||||||||||||||| ||||||||||||||| || ||  | || || || ||||||
Sbjct: 605 gatcttgcttacttgaagaaaaaggttgatgctggagcagatttgattgtgactcagctt 664

                                              
Query: 381 ttctatgataccgacatnttcctcaaatttgtgaa 415
           ||||||||||| || || |||||||| ||||||||
Sbjct: 665 ttctatgatactgatatattcctcaagtttgtgaa 699



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 130/164 (79%)
 Strand = Plus / Plus

                                                                       
Query: 102 aatgggattcaaaatgttctcgcacttagaggagatcctccacatggtcaggacaaattt 161
           ||||| ||||| ||||| || || ||||||||||||||||| ||||| || || || |||
Sbjct: 386 aatggaattcagaatgtgcttgctcttagaggagatcctcctcatggacaagataagttt 445

                                                                       
Query: 162 gtccaagttgctggtggattttcttgngctctagatctggtgcagcatattanagccaag 221
           || || ||||  || |||||| |||| ||| | ||||||||| | || |||     ||||
Sbjct: 446 gttcaggttgaaggaggatttgcttgtgctttggatctggtgaatcacattcgtagcaag 505

                                                       
Query: 222 tatggngattacttnggcataactgtcgctgggtatccagaggc 265
           ||||| |||||||| || || ||||| ||||| ||||| |||||
Sbjct: 506 tatggtgattactttggaatcactgttgctggttatcctgaggc 549

---

>ref|NM_180392.1| Arabidopsis thaliana MTHFR1; methylenetetrahydrofolate reductase
           (NADPH) AT3G59970 (MTHFR1) transcript variant
           AT3G59970.1 mRNA, complete cds
          Length = 2116

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                       
Query: 321 gatcttgcttacttgaagagaaaggttgatgctggcgctgacgttatagttacccagctt 380
           ||||||||||||||||||| ||||||||||||||| || ||  | || || || ||||||
Sbjct: 605 gatcttgcttacttgaagaaaaaggttgatgctggagcagatttgattgtgactcagctt 664

                                              
Query: 381 ttctatgataccgacatnttcctcaaatttgtgaa 415
           ||||||||||| || || |||||||| ||||||||
Sbjct: 665 ttctatgatactgatatattcctcaagtttgtgaa 699



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 130/164 (79%)
 Strand = Plus / Plus

                                                                       
Query: 102 aatgggattcaaaatgttctcgcacttagaggagatcctccacatggtcaggacaaattt 161
           ||||| ||||| ||||| || || ||||||||||||||||| ||||| || || || |||
Sbjct: 386 aatggaattcagaatgtgcttgctcttagaggagatcctcctcatggacaagataagttt 445

                                                                       
Query: 162 gtccaagttgctggtggattttcttgngctctagatctggtgcagcatattanagccaag 221
           || || ||||  || |||||| |||| ||| | ||||||||| | || |||     ||||
Sbjct: 446 gttcaggttgaaggaggatttgcttgtgctttggatctggtgaatcacattcgtagcaag 505

                                                       
Query: 222 tatggngattacttnggcataactgtcgctgggtatccagaggc 265
           ||||| |||||||| || || ||||| ||||| ||||| |||||
Sbjct: 506 tatggtgattactttggaatcactgttgctggttatcctgaggc 549

---

>gb|AY122922.1| Arabidopsis thaliana putative methylenetetrahydrofolate reductase
           MTHFR1 (At3g59970) mRNA, complete cds
          Length = 1810

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                       
Query: 321 gatcttgcttacttgaagagaaaggttgatgctggcgctgacgttatagttacccagctt 380
           ||||||||||||||||||| ||||||||||||||| || ||  | || || || ||||||
Sbjct: 523 gatcttgcttacttgaagaaaaaggttgatgctggagcagatttgattgtgactcagctt 582

                                              
Query: 381 ttctatgataccgacatnttcctcaaatttgtgaa 415
           ||||||||||| || || |||||||| ||||||||
Sbjct: 583 ttctatgatactgatatattcctcaagtttgtgaa 617



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 130/164 (79%)
 Strand = Plus / Plus

                                                                       
Query: 102 aatgggattcaaaatgttctcgcacttagaggagatcctccacatggtcaggacaaattt 161
           ||||| ||||| ||||| || || ||||||||||||||||| ||||| || || || |||
Sbjct: 304 aatggaattcagaatgtgcttgctcttagaggagatcctcctcatggacaagataagttt 363

                                                                       
Query: 162 gtccaagttgctggtggattttcttgngctctagatctggtgcagcatattanagccaag 221
           || || ||||  || |||||| |||| ||| | ||||||||| | || |||     ||||
Sbjct: 364 gttcaggttgaaggaggatttgcttgtgctttggatctggtgaatcacattcgtagcaag 423

                                                       
Query: 222 tatggngattacttnggcataactgtcgctgggtatccagaggc 265
           ||||| |||||||| || || ||||| ||||| ||||| |||||
Sbjct: 424 tatggtgattactttggaatcactgttgctggttatcctgaggc 467

---

>gb|AY070034.1| Arabidopsis thaliana putative methylenetetrahydrofolate reductase
           MTHFR1 (At3g59970) mRNA, complete cds
          Length = 2002

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                       
Query: 321 gatcttgcttacttgaagagaaaggttgatgctggcgctgacgttatagttacccagctt 380
           ||||||||||||||||||| ||||||||||||||| || ||  | || || || ||||||
Sbjct: 605 gatcttgcttacttgaagaaaaaggttgatgctggagcagatttgattgtgactcagctt 664

                                              
Query: 381 ttctatgataccgacatnttcctcaaatttgtgaa 415
           ||||||||||| || || |||||||| ||||||||
Sbjct: 665 ttctatgatactgatatattcctcaagtttgtgaa 699



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 130/164 (79%)
 Strand = Plus / Plus

                                                                       
Query: 102 aatgggattcaaaatgttctcgcacttagaggagatcctccacatggtcaggacaaattt 161
           ||||| ||||| ||||| || || ||||||||||||||||| ||||| || || || |||
Sbjct: 386 aatggaattcagaatgtgcttgctcttagaggagatcctcctcatggacaagataagttt 445

                                                                       
Query: 162 gtccaagttgctggtggattttcttgngctctagatctggtgcagcatattanagccaag 221
           || || ||||  || |||||| |||| ||| | ||||||||| | || |||     ||||
Sbjct: 446 gttcaggttgaaggaggatttgcttgtgctttggatctggtgaatcacattcgtagcaag 505

                                                       
Query: 222 tatggngattacttnggcataactgtcgctgggtatccagaggc 265
           ||||| |||||||| || || ||||| ||||| ||||| |||||
Sbjct: 506 tatggtgattactttggaatcactgttgctggttatcctgaggc 549

---

>gb|AF181966.1|AF181966 Arabidopsis thaliana methylenetetrahydrofolate reductase MTHFR1
           mRNA, complete cds
          Length = 1994

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                       
Query: 321 gatcttgcttacttgaagagaaaggttgatgctggcgctgacgttatagttacccagctt 380
           ||||||||||||||||||| ||||||||||||||| || ||  | || || || ||||||
Sbjct: 585 gatcttgcttacttgaagaaaaaggttgatgctggagcagatttgattgtgactcagctt 644

                                              
Query: 381 ttctatgataccgacatnttcctcaaatttgtgaa 415
           ||||||||||| || || |||||||| ||||||||
Sbjct: 645 ttctatgatactgatatattcctcaagtttgtgaa 679



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 130/164 (79%)
 Strand = Plus / Plus

                                                                       
Query: 102 aatgggattcaaaatgttctcgcacttagaggagatcctccacatggtcaggacaaattt 161
           ||||| ||||| ||||| || || ||||||||||||||||| ||||| || || || |||
Sbjct: 366 aatggaattcagaatgtgcttgctcttagaggagatcctcctcatggacaagataagttt 425

                                                                       
Query: 162 gtccaagttgctggtggattttcttgngctctagatctggtgcagcatattanagccaag 221
           || || ||||  || |||||| |||| ||| | ||||||||| | || |||     ||||
Sbjct: 426 gttcaggttgaaggaggatttgcttgtgctttggatctggtgaatcacattcgtagcaag 485

                                                       
Query: 222 tatggngattacttnggcataactgtcgctgggtatccagaggc 265
           ||||| |||||||| || || ||||| ||||| ||||| |||||
Sbjct: 486 tatggtgattactttggaatcactgttgctggttatcctgaggc 529

---

>ref|NM_129979.2| Arabidopsis thaliana MTHFR2; methylenetetrahydrofolate reductase
           (NADPH) AT2G44160 (MTHFR2) mRNA, complete cds
          Length = 2037

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 70/82 (85%)
 Strand = Plus / Plus

                                                                       
Query: 334 tgaagagaaaggttgatgctggcgctgacgttatagttacccagcttttctatgataccg 393
           |||||| |||| |||||||||| |||||  | || ||||| ||||||||||||||||| |
Sbjct: 627 tgaagaaaaagattgatgctggagctgatctgattgttactcagcttttctatgatactg 686

                                 
Query: 394 acatnttcctcaaatttgtgaa 415
           | || |||||||| ||||||||
Sbjct: 687 atatattcctcaagtttgtgaa 708



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 182/231 (78%), Gaps = 2/231 (0%)
 Strand = Plus / Plus

                                                                       
Query: 45  acgtgcaccaacatgccagtggagaagattgataatgctttggataccattaagaac-aa 103
           ||||| || |||||||| || |||||||||||| ||||| | || || |||| || | ||
Sbjct: 338 acgtgtactaacatgcctgttgagaagattgatcatgctcttgagactatta-gatctaa 396

                                                                       
Query: 104 tgggattcaaaatgttctcgcacttagaggagatcctccacatggtcaggacaaatttgt 163
           ||||||||| ||||| || || |||||||| |||||||| |||||||| || || |||||
Sbjct: 397 tgggattcagaatgtgcttgctcttagaggtgatcctcctcatggtcaagataagtttgt 456

                                                                       
Query: 164 ccaagttgctggtggattttcttgngctctagatctggtgcagcatattanagccaagta 223
            || ||||  ||||| |||  ||| ||| | ||||| ||  | || |||     ||||||
Sbjct: 457 tcaggttgaaggtggttttgattgtgctttggatcttgttaatcacattcgtagcaagta 516

                                                              
Query: 224 tggngattacttnggcataactgtcgctgggtatccagaggcacaccctga 274
           ||| |||||||| || || ||||||||||| ||||| ||||| || |||||
Sbjct: 517 tggtgattactttggtatcactgtcgctggttatcctgaggcgcatcctga 567

---

>emb|AJ245414.1|ATH245414 Arabidopsis thaliana mRNA for methylenetetrahydrofolate reductase
          Length = 2037

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 70/82 (85%)
 Strand = Plus / Plus

                                                                       
Query: 334 tgaagagaaaggttgatgctggcgctgacgttatagttacccagcttttctatgataccg 393
           |||||| |||| |||||||||| |||||  | || ||||| ||||||||||||||||| |
Sbjct: 603 tgaagaaaaagattgatgctggagctgatctgattgttactcagcttttctatgatactg 662

                                 
Query: 394 acatnttcctcaaatttgtgaa 415
           | || |||||||| ||||||||
Sbjct: 663 atatattcctcaagtttgtgaa 684



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 182/231 (78%), Gaps = 2/231 (0%)
 Strand = Plus / Plus

                                                                       
Query: 45  acgtgcaccaacatgccagtggagaagattgataatgctttggataccattaagaac-aa 103
           ||||| || |||||||| || |||||||||||| ||||| | || || |||| || | ||
Sbjct: 314 acgtgtactaacatgcctgttgagaagattgatcatgctcttgagactatta-gatctaa 372

                                                                       
Query: 104 tgggattcaaaatgttctcgcacttagaggagatcctccacatggtcaggacaaatttgt 163
           ||||||||| ||||| || || |||||||| |||||||| |||||||| || || |||||
Sbjct: 373 tgggattcagaatgtgcttgctcttagaggtgatcctcctcatggtcaagataagtttgt 432

                                                                       
Query: 164 ccaagttgctggtggattttcttgngctctagatctggtgcagcatattanagccaagta 223
            || ||||  ||||| |||  ||| ||| | ||||| ||  | || |||     ||||||
Sbjct: 433 tcaggttgaaggtggttttgattgtgctttggatcttgttaatcacattcgtagcaagta 492

                                                              
Query: 224 tggngattacttnggcataactgtcgctgggtatccagaggcacaccctga 274
           ||| |||||||| || || ||||||||||| ||||| ||||| || |||||
Sbjct: 493 tggtgattactttggtatcactgtcgctggttatcctgaggcgcatcctga 543

---

>gb|AY050434.1| Arabidopsis thaliana At2g44160/F6E13.29 mRNA, complete cds
          Length = 1917

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 70/82 (85%)
 Strand = Plus / Plus

                                                                       
Query: 334 tgaagagaaaggttgatgctggcgctgacgttatagttacccagcttttctatgataccg 393
           |||||| |||| |||||||||| |||||  | || ||||| ||||||||||||||||| |
Sbjct: 576 tgaagaaaaagattgatgctggagctgatctgattgttactcagcttttctatgatactg 635

                                 
Query: 394 acatnttcctcaaatttgtgaa 415
           | || |||||||| ||||||||
Sbjct: 636 atatattcctcaagtttgtgaa 657



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 182/231 (78%), Gaps = 2/231 (0%)
 Strand = Plus / Plus

                                                                       
Query: 45  acgtgcaccaacatgccagtggagaagattgataatgctttggataccattaagaac-aa 103
           ||||| || |||||||| || |||||||||||| ||||| | || || |||| || | ||
Sbjct: 287 acgtgtactaacatgcctgttgagaagattgatcatgctcttgagactatta-gatctaa 345

                                                                       
Query: 104 tgggattcaaaatgttctcgcacttagaggagatcctccacatggtcaggacaaatttgt 163
           ||||||||| ||||| || || |||||||| |||||||| |||||||| || || |||||
Sbjct: 346 tgggattcagaatgtgcttgctcttagaggtgatcctcctcatggtcaagataagtttgt 405

                                                                       
Query: 164 ccaagttgctggtggattttcttgngctctagatctggtgcagcatattanagccaagta 223
            || ||||  ||||| |||  ||| ||| | ||||| ||  | || |||     ||||||
Sbjct: 406 tcaggttgaaggtggttttgattgtgctttggatcttgttaatcacattcgtagcaagta 465

                                                              
Query: 224 tggngattacttnggcataactgtcgctgggtatccagaggcacaccctga 274
           ||| |||||||| || || ||||||||||| ||||| ||||| || |||||
Sbjct: 466 tggtgattactttggtatcactgtcgctggttatcctgaggcgcatcctga 516

---

>gb|AF370515.1|AF370515 Arabidopsis thaliana putative methylenetetrahydrofolate reductase
           (At2g44160; F6E13.29) mRNA, complete cds
          Length = 2034

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 70/82 (85%)
 Strand = Plus / Plus

                                                                       
Query: 334 tgaagagaaaggttgatgctggcgctgacgttatagttacccagcttttctatgataccg 393
           |||||| |||| |||||||||| |||||  | || ||||| ||||||||||||||||| |
Sbjct: 626 tgaagaaaaagattgatgctggagctgatctgattgttactcagcttttctatgatactg 685

                                 
Query: 394 acatnttcctcaaatttgtgaa 415
           | || |||||||| ||||||||
Sbjct: 686 atatattcctcaagtttgtgaa 707



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 181/231 (78%), Gaps = 2/231 (0%)
 Strand = Plus / Plus

                                                                       
Query: 45  acgtgcaccaacatgccagtggagaagattgataatgctttggataccattaagaac-aa 103
           ||||| || |||||||| || |||||||||||| ||||| | || || |||| || | ||
Sbjct: 337 acgtgtactaacatgcctgttgagaagattgatcatgctcttgagactatta-gatctaa 395

                                                                       
Query: 104 tgggattcaaaatgttctcgcacttagaggagatcctccacatggtcaggacaaatttgt 163
           ||||||||| ||||| || || |||||||| |||||||  |||||||| || || |||||
Sbjct: 396 tgggattcagaatgtgcttgctcttagaggtgatcctcatcatggtcaagataagtttgt 455

                                                                       
Query: 164 ccaagttgctggtggattttcttgngctctagatctggtgcagcatattanagccaagta 223
            || ||||  ||||| |||  ||| ||| | ||||| ||  | || |||     ||||||
Sbjct: 456 tcaggttgaaggtggttttgattgtgctttggatcttgttaatcacattcgtagcaagta 515

                                                              
Query: 224 tggngattacttnggcataactgtcgctgggtatccagaggcacaccctga 274
           ||| |||||||| || || ||||||||||| ||||| ||||| || |||||
Sbjct: 516 tggtgattactttggtatcactgtcgctggttatcctgaggcgcatcctga 566

---

>gb|AF181967.1|AF181967 Arabidopsis thaliana methylenetetrahydrofolate reductase MTHFR2
           mRNA, complete cds
          Length = 1897

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 70/82 (85%)
 Strand = Plus / Plus

                                                                       
Query: 334 tgaagagaaaggttgatgctggcgctgacgttatagttacccagcttttctatgataccg 393
           |||||| |||| |||||||||| |||||  | || ||||| ||||||||||||||||| |
Sbjct: 536 tgaagaaaaagattgatgctggagctgatctgattgttactcagcttttctatgatactg 595

                                 
Query: 394 acatnttcctcaaatttgtgaa 415
           | || |||||||| ||||||||
Sbjct: 596 atatattcctcaagtttgtgaa 617



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 182/231 (78%), Gaps = 2/231 (0%)
 Strand = Plus / Plus

                                                                       
Query: 45  acgtgcaccaacatgccagtggagaagattgataatgctttggataccattaagaac-aa 103
           ||||| || |||||||| || |||||||||||| ||||| | || || |||| || | ||
Sbjct: 247 acgtgtactaacatgcctgttgagaagattgatcatgctcttgagactatta-gatctaa 305

                                                                       
Query: 104 tgggattcaaaatgttctcgcacttagaggagatcctccacatggtcaggacaaatttgt 163
           ||||||||| ||||| || || |||||||| |||||||| |||||||| || || |||||
Sbjct: 306 tgggattcagaatgtgcttgctcttagaggtgatcctcctcatggtcaagataagtttgt 365

                                                                       
Query: 164 ccaagttgctggtggattttcttgngctctagatctggtgcagcatattanagccaagta 223
            || ||||  ||||| |||  ||| ||| | ||||| ||  | || |||     ||||||
Sbjct: 366 tcaggttgaaggtggttttgattgtgctttggatcttgttaatcacattcgtagcaagta 425

                                                              
Query: 224 tggngattacttnggcataactgtcgctgggtatccagaggcacaccctga 274
           ||| |||||||| || || ||||||||||| ||||| ||||| || |||||
Sbjct: 426 tggtgattactttggtatcactgtcgctggttatcctgaggcgcatcctga 476

---

>gb|AC004005.3| Arabidopsis thaliana chromosome 2 clone F6E13 map CIC10F02, CIC02E07,
             complete sequence
          Length = 109741

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                         
Query: 346   ttgatgctggcgctgacgttatagttacccagcttttctatgataccgacatnttcctca 405
             |||||||||| |||||  | || ||||| ||||||||||||||||| || || |||||||
Sbjct: 93279 ttgatgctggagctgatctgattgttactcagcttttctatgatactgatatattcctca 93338

                       
Query: 406   aatttgtgaa 415
             | ||||||||
Sbjct: 93339 agtttgtgaa 93348



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 170/216 (78%), Gaps = 2/216 (0%)
 Strand = Plus / Plus

                                                                         
Query: 45    acgtgcaccaacatgccagtggagaagattgataatgctttggataccattaagaac-aa 103
             ||||| || |||||||| || |||||||||||| ||||| | || || |||| || | ||
Sbjct: 92814 acgtgtactaacatgcctgttgagaagattgatcatgctcttgagactatta-gatctaa 92872

                                                                         
Query: 104   tgggattcaaaatgttctcgcacttagaggagatcctccacatggtcaggacaaatttgt 163
             ||||||||| ||||| || || |||||||| |||||||| |||||||| || || |||||
Sbjct: 92873 tgggattcagaatgtgcttgctcttagaggtgatcctcctcatggtcaagataagtttgt 92932

                                                                         
Query: 164   ccaagttgctggtggattttcttgngctctagatctggtgcagcatattanagccaagta 223
              || ||||  ||||| |||  ||| ||| | ||||| ||  | || |||     ||||||
Sbjct: 92933 tcaggttgaaggtggttttgattgtgctttggatcttgttaatcacattcgtagcaagta 92992

                                                 
Query: 224   tggngattacttnggcataactgtcgctgggtatcc 259
             ||| |||||||| || || ||||||||||| |||||
Sbjct: 92993 tggtgattactttggtatcactgtcgctggttatcc 93028

---

>emb|AL138647.1|ATF24G16 Arabidopsis thaliana DNA chromosome 3, BAC clone F24G16
          Length = 100906

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 125/158 (79%)
 Strand = Plus / Plus

                                                                         
Query: 102   aatgggattcaaaatgttctcgcacttagaggagatcctccacatggtcaggacaaattt 161
             ||||| ||||| ||||| || || ||||||||||||||||| ||||| || || || |||
Sbjct: 84436 aatggaattcagaatgtgcttgctcttagaggagatcctcctcatggacaagataagttt 84495

                                                                         
Query: 162   gtccaagttgctggtggattttcttgngctctagatctggtgcagcatattanagccaag 221
             || || ||||  || |||||| |||| ||| | ||||||||| | || |||     ||||
Sbjct: 84496 gttcaggttgaaggaggatttgcttgtgctttggatctggtgaatcacattcgtagcaag 84555

                                                   
Query: 222   tatggngattacttnggcataactgtcgctgggtatcc 259
             ||||| |||||||| || || ||||| ||||| |||||
Sbjct: 84556 tatggtgattactttggaatcactgttgctggttatcc 84593



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 375   cagcttttctatgataccgacatnttcctcaaatttgtgaa 415
             ||||||||||||||||| || || |||||||| ||||||||
Sbjct: 84895 cagcttttctatgatactgatatattcctcaagtttgtgaa 84935



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 321   gatcttgcttacttgaagagaaaggtt 347
             ||||||||||||||||||| |||||||
Sbjct: 84747 gatcttgcttacttgaagaaaaaggtt 84773

---

>ref|XM_446274.1| Candida glabrata CBS138, CAGL0F07029g partial mRNA
          Length = 1803

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 36  atgcacttgacgtgcaccaacatgcc 61
           ||||||||||| ||||||||||||||
Sbjct: 250 atgcacttgacctgcaccaacatgcc 275

---

>emb|CR380952.1| Candida glabrata strain CBS138 chromosome F complete sequence
          Length = 927101

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 36     atgcacttgacgtgcaccaacatgcc 61
              ||||||||||| ||||||||||||||
Sbjct: 689580 atgcacttgacctgcaccaacatgcc 689605

---

>gb|AC128711.4| Homo sapiens 3 BAC RP11-70N22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 94869

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 306   gaagcatatagcaaagatcttgcttactt 334
             ||||||||||||| ||||||| |||||||
Sbjct: 24376 gaagcatatagcacagatctttcttactt 24404

---

>gb|AC142271.3| Mus musculus chromosome 5 clone RP24-69A21, complete sequence
          Length = 179941

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   ccagaggcacaccctgaggt 277
             ||||||||||||||||||||
Sbjct: 17588 ccagaggcacaccctgaggt 17607

---

>ref|XM_548399.2| PREDICTED: Canis familiaris similar to Retinoic acid receptor
           RXR-alpha (Retinoid X receptor alpha), transcript
           variant 1 (LOC491278), mRNA
          Length = 1319

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  acatgccagtggagaagatt 74
           ||||||||||||||||||||
Sbjct: 484 acatgccagtggagaagatt 503

---

>ref|XM_853943.1| PREDICTED: Canis familiaris similar to Retinoic acid receptor
           RXR-alpha (Retinoid X receptor alpha), transcript
           variant 17 (LOC491278), mRNA
          Length = 1172

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  acatgccagtggagaagatt 74
           ||||||||||||||||||||
Sbjct: 484 acatgccagtggagaagatt 503

---

>ref|XM_853908.1| PREDICTED: Canis familiaris similar to Retinoic acid receptor
           RXR-alpha (Retinoid X receptor alpha), transcript
           variant 16 (LOC491278), mRNA
          Length = 1169

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  acatgccagtggagaagatt 74
           ||||||||||||||||||||
Sbjct: 484 acatgccagtggagaagatt 503

---

>ref|XM_853865.1| PREDICTED: Canis familiaris similar to Retinoic acid receptor
           RXR-alpha (Retinoid X receptor alpha), transcript
           variant 15 (LOC491278), mRNA
          Length = 1175

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  acatgccagtggagaagatt 74
           ||||||||||||||||||||
Sbjct: 484 acatgccagtggagaagatt 503

---

>ref|XM_853824.1| PREDICTED: Canis familiaris similar to Retinoic acid receptor
           RXR-alpha (Retinoid X receptor alpha), transcript
           variant 14 (LOC491278), mRNA
          Length = 1172

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  acatgccagtggagaagatt 74
           ||||||||||||||||||||
Sbjct: 484 acatgccagtggagaagatt 503

---

>ref|XM_853786.1| PREDICTED: Canis familiaris similar to Retinoic acid receptor
           RXR-alpha (Retinoid X receptor alpha), transcript
           variant 13 (LOC491278), mRNA
          Length = 1196

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  acatgccagtggagaagatt 74
           ||||||||||||||||||||
Sbjct: 484 acatgccagtggagaagatt 503

---

>ref|XM_853747.1| PREDICTED: Canis familiaris similar to Retinoic acid receptor
           RXR-alpha (Retinoid X receptor alpha), transcript
           variant 12 (LOC491278), mRNA
          Length = 1160

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  acatgccagtggagaagatt 74
           ||||||||||||||||||||
Sbjct: 484 acatgccagtggagaagatt 503

---

>ref|XM_853713.1| PREDICTED: Canis familiaris similar to Retinoic acid receptor
           RXR-alpha (Retinoid X receptor alpha), transcript
           variant 11 (LOC491278), mRNA
          Length = 1211

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  acatgccagtggagaagatt 74
           ||||||||||||||||||||
Sbjct: 484 acatgccagtggagaagatt 503

---

>ref|XM_853674.1| PREDICTED: Canis familiaris similar to Retinoic acid receptor
           RXR-alpha (Retinoid X receptor alpha), transcript
           variant 10 (LOC491278), mRNA
          Length = 1238

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  acatgccagtggagaagatt 74
           ||||||||||||||||||||
Sbjct: 484 acatgccagtggagaagatt 503

---

>ref|XM_853636.1| PREDICTED: Canis familiaris similar to Retinoic acid receptor
           RXR-alpha (Retinoid X receptor alpha), transcript
           variant 9 (LOC491278), mRNA
          Length = 1253

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  acatgccagtggagaagatt 74
           ||||||||||||||||||||
Sbjct: 484 acatgccagtggagaagatt 503

---

>ref|XM_844316.1| PREDICTED: Canis familiaris similar to Retinoic acid receptor
           RXR-alpha (Retinoid X receptor alpha), transcript
           variant 3 (LOC491278), mRNA
          Length = 1238

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  acatgccagtggagaagatt 74
           ||||||||||||||||||||
Sbjct: 484 acatgccagtggagaagatt 503

---

>ref|XM_853557.1| PREDICTED: Canis familiaris similar to Retinoic acid receptor
           RXR-alpha (Retinoid X receptor alpha), transcript
           variant 8 (LOC491278), mRNA
          Length = 1175

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  acatgccagtggagaagatt 74
           ||||||||||||||||||||
Sbjct: 484 acatgccagtggagaagatt 503

---

>ref|XM_853467.1| PREDICTED: Canis familiaris similar to Retinoic acid receptor
           RXR-alpha (Retinoid X receptor alpha), transcript
           variant 6 (LOC491278), mRNA
          Length = 1106

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  acatgccagtggagaagatt 74
           ||||||||||||||||||||
Sbjct: 484 acatgccagtggagaagatt 503

---

>ref|XM_853432.1| PREDICTED: Canis familiaris similar to Retinoic acid receptor
           RXR-alpha (Retinoid X receptor alpha), transcript
           variant 5 (LOC491278), mRNA
          Length = 1112

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  acatgccagtggagaagatt 74
           ||||||||||||||||||||
Sbjct: 484 acatgccagtggagaagatt 503

---

>ref|XM_853396.1| PREDICTED: Canis familiaris similar to Retinoic acid receptor
           RXR-alpha (Retinoid X receptor alpha), transcript
           variant 4 (LOC491278), mRNA
          Length = 1262

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  acatgccagtggagaagatt 74
           ||||||||||||||||||||
Sbjct: 508 acatgccagtggagaagatt 527

---

>emb|AL356292.21| Human DNA sequence from clone RP11-363I22 on chromosome 1 Contains the
             5' end of the gene for GPP34-related protein (GPP34R), the
             gene for a novel protein (DKFZp434A1315), the CTSS gene
             for cathepsin S, a pseudogene similar to part of short
             coiled-coil protein (SCOC) and the 3' end of the CTSK gene
             for cathepsin K (pycnodysostosis), complete sequence
          Length = 154068

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    agaacaatgggattcaaaat 116
             ||||||||||||||||||||
Sbjct: 43360 agaacaatgggattcaaaat 43341

---

>dbj|AB205145.1| Epichloe festucae EF100, EF101, EF102, perA, EF103, EF104, EF105,
             EF106, EF107, EF108, EF109, genes for hypothetical
             proteins, non-ribosomal peptide synthetase, complete cds
          Length = 37429

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   gaagcatatagcaaagatct 325
             ||||||||||||||||||||
Sbjct: 32241 gaagcatatagcaaagatct 32222

---

>gb|AC084572.1|CBRG39K23 Caenorhabditis briggsae cosmid G39K23, complete sequence
          Length = 39590

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 365   tatagttacccagcttttctatga 388
             |||||||||||| |||||||||||
Sbjct: 16909 tatagttacccatcttttctatga 16932

---

>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5)
          Length = 2199546

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 332     cttgaagagaaaggttgatgctgg 355
               ||||||||| ||||||||||||||
Sbjct: 1966567 cttgaagaggaaggttgatgctgg 1966544


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,096,023
Number of Sequences: 3902068
Number of extensions: 3096023
Number of successful extensions: 50841
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50691
Number of HSP's gapped (non-prelim): 144
length of query: 473
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 451
effective length of database: 17,147,199,772
effective search space: 7733387097172
effective search space used: 7733387097172
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---