ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags18m07 |
|---|---|
| Clone Library Name | barley_pub |
>SPA2_STAAU (P38507) Immunoglobulin G-binding protein A precursor (IgG-binding| protein A) (Staphylococcal protein A) Length = 508 Score = 36.6 bits (83), Expect = 0.049 Identities = 37/163 (22%), Positives = 64/163 (39%), Gaps = 2/163 (1%) Frame = +1 Query: 46 RMKIIAQLKANEDMKKNTMMMVEQSKVLKTPGAEKKTKRELFDALRQELETPVL-EKASK 222 R I LK + N + ++ + P A+ K +E +A + L P L E+ Sbjct: 238 RNGFIQSLKDDPSQSANLLAEAKKLNDAQAPKADNKFNKEQQNAFYEILHLPNLTEEQRN 297 Query: 223 AVWELILDNGGLGKEITETVEKVFCRLSGIDMMPPPASTSGAPQEKQTNM-AVEEGQKDM 399 + + D+ + KEI +K+ + + AP+E+ N E+G K Sbjct: 298 GFIQSLKDDPSVSKEILAEAKKL--------------NDAQAPKEEDNNKPGKEDGNKPG 343 Query: 400 EMDASEPSSSSRKRPFSDINVKGAGAIPNGGATYQHDGHEDGN 528 + D ++P K+P + K G + G EDGN Sbjct: 344 KEDGNKPGKEDNKKPGKEDGNK------PGKEDNKKPGKEDGN 380
>SPA_STAAN (P99134) Immunoglobulin G binding protein A precursor (IgG binding| protein A) (Staphylococcal protein A) Length = 450 Score = 33.9 bits (76), Expect = 0.32 Identities = 36/163 (22%), Positives = 62/163 (38%), Gaps = 2/163 (1%) Frame = +1 Query: 46 RMKIIAQLKANEDMKKNTMMMVEQSKVLKTPGAEKKTKRELFDALRQELETPVL-EKASK 222 R I LK + N + ++ + P A+ K +E +A + L P L E+ Sbjct: 180 RNGFIQSLKDDPSQSANLLSEAKKLNESQAPKADNKFNKEQQNAFYEILHLPNLNEEQRN 239 Query: 223 AVWELILDNGGLGKEITETVEKVFCRLSGIDMMPPPASTSGAPQEKQTNM-AVEEGQKDM 399 + + D+ + KEI +K+ + + AP+E+ E+G K Sbjct: 240 GFIQSLKDDPSVSKEILAEAKKL--------------NDAQAPKEEDNKKPGKEDGNKPG 285 Query: 400 EMDASEPSSSSRKRPFSDINVKGAGAIPNGGATYQHDGHEDGN 528 + D ++P K+P + K G G EDGN Sbjct: 286 KEDGNKPGKEDNKKPGKEDGNK------PGKEDNNKPGKEDGN 322
>SPA_STAAM (P0A015) Immunoglobulin G binding protein A precursor (IgG binding| protein A) (Staphylococcal protein A) Length = 450 Score = 33.9 bits (76), Expect = 0.32 Identities = 36/163 (22%), Positives = 62/163 (38%), Gaps = 2/163 (1%) Frame = +1 Query: 46 RMKIIAQLKANEDMKKNTMMMVEQSKVLKTPGAEKKTKRELFDALRQELETPVL-EKASK 222 R I LK + N + ++ + P A+ K +E +A + L P L E+ Sbjct: 180 RNGFIQSLKDDPSQSANLLSEAKKLNESQAPKADNKFNKEQQNAFYEILHLPNLNEEQRN 239 Query: 223 AVWELILDNGGLGKEITETVEKVFCRLSGIDMMPPPASTSGAPQEKQTNM-AVEEGQKDM 399 + + D+ + KEI +K+ + + AP+E+ E+G K Sbjct: 240 GFIQSLKDDPSVSKEILAEAKKL--------------NDAQAPKEEDNKKPGKEDGNKPG 285 Query: 400 EMDASEPSSSSRKRPFSDINVKGAGAIPNGGATYQHDGHEDGN 528 + D ++P K+P + K G G EDGN Sbjct: 286 KEDGNKPGKEDNKKPGKEDGNK------PGKEDNNKPGKEDGN 322
>BRE1_KLULA (Q6CWM4) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 663 Score = 33.5 bits (75), Expect = 0.41 Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 6/91 (6%) Frame = +1 Query: 49 MKIIAQLKANEDMKKNTMMMVEQSKVLKTPGAEKKTKRELFDALRQELETPV--LEKASK 222 MKI+ N +KK+T + +++ L E ++K + D ++L+ V E SK Sbjct: 523 MKIVELTSENNKLKKSTERLESETRNLIGTKTELESKIKDKDIENKQLKIKVSSAEAKSK 582 Query: 223 AVWELILDNGGLGKEITETVEK----VFCRL 303 +++ +L NGG + E +E ++C L Sbjct: 583 KLYKTLLSNGGDNGALAEELENFRTIIYCSL 613
>ARFK_ARATH (Q9ZPY6) Auxin response factor 11| Length = 601 Score = 33.1 bits (74), Expect = 0.54 Identities = 21/62 (33%), Positives = 32/62 (51%) Frame = +1 Query: 247 NGGLGKEITETVEKVFCRLSGIDMMPPPASTSGAPQEKQTNMAVEEGQKDMEMDASEPSS 426 + GL +ITE CRL G D+ PAS + P +KQ ++V+ D +P+S Sbjct: 419 SSGLQCKITEAPVTSSCRLFGFDLTSKPASAT-IPHDKQL-ISVDSNISDSTTKCQDPNS 476 Query: 427 SS 432 S+ Sbjct: 477 SN 478
>TALA_POVMC (P12905) Large T antigen| Length = 777 Score = 32.3 bits (72), Expect = 0.92 Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 1/62 (1%) Frame = +1 Query: 325 PPASTSGAPQEKQTNMAVEEGQKDMEMDASE-PSSSSRKRPFSDINVKGAGAIPNGGATY 501 PP T P ++ N V E + D P S R RP G G NGG+ + Sbjct: 151 PPTDTPAHPAGRRRNPCVAEPDDSISPDPPRTPVSRKRPRPAGATGGGGGGVHANGGSVF 210 Query: 502 QH 507 H Sbjct: 211 GH 212
>TRUC_PECCC (Q47417) tRNA pseudouridine synthase C (EC 5.4.99.-) (tRNA-uridine| isomerase C) (tRNA pseudouridylate synthase C) Length = 376 Score = 32.3 bits (72), Expect = 0.92 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Frame = +1 Query: 163 ELFDALRQELETPVLEKASKAVWE-LILDNGGLGKEITETVEKVFCRLSGIDMMPPPAST 339 E+ AL Q+ E+ ++K AV +LD+G + +TE ++K+ + + D P PA T Sbjct: 182 EVARALSQQFESHQMQKTYHAVVRGYVLDDGVIDYALTEELDKIADKFTNPDKAPQPAVT 241
>DBF2_YEAST (P22204) Cell cycle protein kinase DBF2 (EC 2.7.11.1)| Length = 572 Score = 32.0 bits (71), Expect = 1.2 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Frame = +1 Query: 250 GGLGKEITETVEKVFCRLSGIDMMPPPASTSGAPQEKQTNMAVEE-GQKDMEMDASEPSS 426 GG G + + K R +GI+ P P S P E +NM ++E Q DM++ S+ Sbjct: 28 GGTGLFPNQNITKRRTRPAGINDSPSPVKPSFFPYEDTSNMDIDEVSQPDMDV-----SN 82 Query: 427 SSRKRP 444 S +K P Sbjct: 83 SPKKLP 88
>DBP10_CRYNE (Q5KMS9) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 802 Score = 31.6 bits (70), Expect = 1.6 Identities = 37/130 (28%), Positives = 51/130 (39%) Frame = +1 Query: 85 MKKNTMMMVEQSKVLKTPGAEKKTKRELFDALRQELETPVLEKASKAVWELILDNGGLGK 264 MKK + E+ K + AEK T + A +EL P L + LD+ G Sbjct: 551 MKKRRKTVDERQKRVSKAEAEKSTASGMEKAPVKELPAPQLPSKNFKDPSFYLDHTQRGA 610 Query: 265 EITETVEKVFCRLSGIDMMPPPASTSGAPQEKQTNMAVEEGQKDMEMDASEPSSSSRKRP 444 E EK + SG++ S SGA T+M +EG AS+ S +K Sbjct: 611 E----AEKGYSLKSGVE------SLSGA----ITDMTADEGTGPKAQKASQLSWDRKKHK 656 Query: 445 FSDINVKGAG 474 F N G Sbjct: 657 FIKKNGSADG 666
>RUVA_CLOPE (Q8XJ13) Holliday junction ATP-dependent DNA helicase ruvA (EC| 3.6.1.-) Length = 201 Score = 31.2 bits (69), Expect = 2.1 Identities = 18/64 (28%), Positives = 30/64 (46%) Frame = +1 Query: 91 KNTMMMVEQSKVLKTPGAEKKTKRELFDALRQELETPVLEKASKAVWELILDNGGLGKEI 270 K +MM ++ + + PG KKT + + L+ +L+ L + E I DN I Sbjct: 99 KYAIMMGDEKHITRAPGIGKKTAQRIILELKDKLKPDELTSEEGQLIEGINDNSDYSFNI 158 Query: 271 TETV 282 ET+ Sbjct: 159 NETL 162
>SYL_BACLD (Q65FX8) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 804 Score = 31.2 bits (69), Expect = 2.1 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 12/85 (14%) Frame = +1 Query: 76 NEDMKKNTMMMVEQSKVLKTPGAEKKTKRELF----DALRQELETPVLEKASK---AVWE 234 NE M K+ +V ++++T GA+ E+F DA T L+ A + VW Sbjct: 574 NEKMSKSKGNVVNPDEIVETHGADTLRLYEMFMGPLDA-SIAWSTTGLDGARRFLDRVWR 632 Query: 235 LIL-DNGGLGKEIT----ETVEKVF 294 L + DNGGL ++I ET+E+V+ Sbjct: 633 LFIDDNGGLNEKIVEGAGETLERVY 657
>MUTS2_CLOTE (Q891U1) MutS2 protein| Length = 786 Score = 30.4 bits (67), Expect = 3.5 Identities = 30/149 (20%), Positives = 70/149 (46%), Gaps = 10/149 (6%) Frame = +1 Query: 1 EVLESLKNDGTVDALRMKIIAQ------LKANEDMKKNTMMMVEQSKVLKTPGAEKKTKR 162 +++E KN+ D+L+ + + + +KA++D ++ M +E ++ + + K Sbjct: 500 DIIEEAKNNIESDSLKFEALIEKLQSKSIKASDDARRAEMYKLEADRLKD----KYEDKL 555 Query: 163 ELFDALRQELETPVLEKASKAVWELILDNGGLGKEITETVEKVFCRLSGIDMMPPPASTS 342 ++ + R++L E+A K + E + + K I E +EK+ + + Sbjct: 556 KIVEETREKLLKGAQEEAKKLIKEAKEEADEILKNIRE-LEKMGYSSTARQKLEEERKKL 614 Query: 343 GAP----QEKQTNMAVEEGQKDMEMDASE 417 + +EK+ N+ E+G+K E++ E Sbjct: 615 NSKIHKLEEKEENLNKEKGKKIKEINLGE 643
>TRYP_STREX (P80420) Trypsin-like protease precursor (EC 3.4.21.-)| Length = 260 Score = 30.4 bits (67), Expect = 3.5 Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 15/106 (14%) Frame = +1 Query: 82 DMKKNTMMMVEQSKVLKTPGAEKKTKRELFDALRQELETPVLEKA----------SKAVW 231 D+ ++ + V+ +KVL+ PG K K L + + P L+ A + A W Sbjct: 94 DLNSSSAIKVKSTKVLQAPGYNGKGKDWALIKLAKPINLPTLKIADTKAYDNGTFTVAGW 153 Query: 232 ELILDNGG----LGKEITETVEKVFCRLS-GIDMMPPPASTSGAPQ 354 + GG L K V C+ S G D++P +G PQ Sbjct: 154 GAAREGGGQQRYLLKANVPFVSDASCQSSYGSDLVPSEEICAGLPQ 199
>NFM_MOUSE (P08553) Neurofilament triplet M protein (160 kDa neurofilament| protein) (Neurofilament medium polypeptide) (NF-M) Length = 848 Score = 30.4 bits (67), Expect = 3.5 Identities = 36/133 (27%), Positives = 55/133 (41%) Frame = +1 Query: 70 KANEDMKKNTMMMVEQSKVLKTPGAEKKTKRELFDALRQELETPVLEKASKAVWELILDN 249 K E+ K+ T ++ KV EKK ++ A +++ E+PV EKA V E+I Sbjct: 633 KVEEEKKEVTKESPKEEKV------EKKEEKPKDVADKKKAESPVKEKA---VEEVIT-- 681 Query: 250 GGLGKEITETVEKVFCRLSGIDMMPPPASTSGAPQEKQTNMAVEEGQKDMEMDASEPSSS 429 + K + ++EK PQEK A EEG + E P S Sbjct: 682 --ISKSVKVSLEK------------DTKEEKPQPQEKVKEKAEEEGGSEEEGSDRSPQES 727 Query: 430 SRKRPFSDINVKG 468 ++ DI + G Sbjct: 728 KKE----DIAING 736
>MUTS_PHOPR (Q6LMU0) DNA mismatch repair protein mutS| Length = 856 Score = 30.4 bits (67), Expect = 3.5 Identities = 25/61 (40%), Positives = 33/61 (54%) Frame = +1 Query: 55 IIAQLKANEDMKKNTMMMVEQSKVLKTPGAEKKTKRELFDALRQELETPVLEKASKAVWE 234 II +LK +ED ++ +SK L G EKK ELFD L LE L+ A+ A+ E Sbjct: 503 IIPELKEHEDK-----VLSSKSKAL---GLEKKLWEELFDQLLPHLER--LQNAASALSE 552 Query: 235 L 237 L Sbjct: 553 L 553
>MRAW_MYCGA (Q7NB79) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 317 Score = 30.4 bits (67), Expect = 3.5 Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 11/118 (9%) Frame = +1 Query: 1 EVLESLKNDGTVDALRMKIIAQLKANEDMKKNTMMMVEQSKVLKTPG---AEKKTKRELF 171 E+++ +KN G + ++A KA E + NT+ +VE K A K R F Sbjct: 154 ELVKIMKNYGEIKDPYRVVVALKKAFEKKELNTLEVVELIKKHVNKAELYANKHPARRYF 213 Query: 172 DALRQEL--ETPVLEKASKAVWELILDNGGLGKEIT------ETVEKVFCRLSGIDMM 321 ALR + E VLEK + L+ GG IT + V+KVF L+ I + Sbjct: 214 QALRIAVNNELEVLEKLLSYL-PSYLNKGGKIAIITFHSLEEKIVKKVFRHLASISSL 270
>PSAB_YERPS (P69966) Chaperone protein psaB precursor| Length = 273 Score = 30.4 bits (67), Expect = 3.5 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = +1 Query: 211 KASKAVWELILDNGGLGKEITETVE 285 KA++ W++I DNGG+ +E TV+ Sbjct: 249 KATEVFWQVINDNGGVSREFKSTVQ 273
>PSAB_YERPE (P69965) Chaperone protein psaB precursor| Length = 273 Score = 30.4 bits (67), Expect = 3.5 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = +1 Query: 211 KASKAVWELILDNGGLGKEITETVE 285 KA++ W++I DNGG+ +E TV+ Sbjct: 249 KATEVFWQVINDNGGVSREFKSTVQ 273
>GGA3_MOUSE (Q8BMI3) ADP-ribosylation factor-binding protein GGA3| (Golgi-localized, gamma ear-containing, ARF-binding protein 3) Length = 718 Score = 30.0 bits (66), Expect = 4.6 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +1 Query: 304 SGIDMMPPPASTSGAPQEKQTNMA 375 SGI ++PPP TSG P+ + ++ A Sbjct: 347 SGIPILPPPPQTSGPPRSRSSSQA 370
>SYNG_MOUSE (Q5SV85) AP1 gamma subunit-binding protein 1 (Gamma-synergin)| Length = 1306 Score = 30.0 bits (66), Expect = 4.6 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +1 Query: 325 PPASTSGAPQEKQTNMAVEEGQKDMEMDASEPSSSSRKRPFS 450 P A SGA Q+ QT + +D++M +S S ++ PFS Sbjct: 587 PSAFASGAAQQTQTQVKTPLNLEDLDMFSSVDCSGEKQVPFS 628
>GOGA2_HUMAN (Q08379) Golgin subfamily A member 2 (Cis-Golgi matrix protein| GM130) (Gm130 autoantigen) (Golgin-95) Length = 990 Score = 30.0 bits (66), Expect = 4.6 Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 7/61 (11%) Frame = +1 Query: 37 DALRMKIIAQLKANEDMKKNTMMMVEQSKVLKTPGA-------EKKTKRELFDALRQELE 195 DALR+++ ++NED+K+ + E+ +VL T A E + K E+ + L Q+ Sbjct: 282 DALRLELYKNTQSNEDLKQEKSELEEKLRVLVTEKAGMQLNLEELQKKLEMTELLLQQFS 341 Query: 196 T 198 + Sbjct: 342 S 342
>LGE1_ASHGO (Q75A59) Transcriptional regulatory protein LGE1| Length = 244 Score = 30.0 bits (66), Expect = 4.6 Identities = 17/63 (26%), Positives = 27/63 (42%) Frame = +1 Query: 325 PPASTSGAPQEKQTNMAVEEGQKDMEMDASEPSSSSRKRPFSDINVKGAGAIPNGGATYQ 504 PP+S G+ + N A Q + A S+ ++P+ +G+G GG Y Sbjct: 32 PPSSQGGSARAAPLNGAFHSHQPHSQGYARAEGSNGYRQPYGRGGYRGSGGRYYGGYGYG 91 Query: 505 HDG 513 H G Sbjct: 92 HGG 94
>MRCKG_MOUSE (Q80UW5) Serine/threonine-protein kinase MRCK gamma (EC 2.7.11.1)| (CDC42-binding protein kinase gamma) (Myotonic dystrophy kinase-related CDC42-binding kinase gamma) (Myotonic dystrophy protein kinase-like alpha) (MRCK gamma) (DMPK-like gamma Length = 1551 Score = 30.0 bits (66), Expect = 4.6 Identities = 41/163 (25%), Positives = 65/163 (39%) Frame = +1 Query: 1 EVLESLKNDGTVDALRMKIIAQLKANEDMKKNTMMMVEQSKVLKTPGAEKKTKRELFDAL 180 E LESL+N GT + Q KA K +E L+ AE + K+ L + L Sbjct: 706 EELESLRNVGTQTLPTRPLDHQWKARRLQKMEASARLELQSALE---AEIRAKQSLQEQL 762 Query: 181 RQELETPVLEKASKAVWELILDNGGLGKEITETVEKVFCRLSGIDMMPPPASTSGAPQEK 360 Q E +A + + E + L +E+ E E++ R G D P STS P Sbjct: 763 TQVQEAQ--RQAERRLQEAEKQSQALQQEVAELREELQARGPG-DARP---STSLIPL-- 814 Query: 361 QTNMAVEEGQKDMEMDASEPSSSSRKRPFSDINVKGAGAIPNG 489 ++ +KD D R +++ +G ++ G Sbjct: 815 ---LSFWNTEKDSAKDPGNSGEGPRSGAEAELRPEGRRSLRMG 854
>PGK_KLULA (P14828) Phosphoglycerate kinase (EC 2.7.2.3)| Length = 416 Score = 29.6 bits (65), Expect = 6.0 Identities = 12/29 (41%), Positives = 21/29 (72%) Frame = -2 Query: 255 STIVKYQLPNRF*GFLKNRSFQFLSKSIK 169 S+IV + LPNR GFL ++ Q+ +K+++ Sbjct: 172 SSIVGFDLPNRAAGFLLSKELQYFAKALE 200
>SYA_RHOBA (Q7UFH9) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 945 Score = 29.6 bits (65), Expect = 6.0 Identities = 13/51 (25%), Positives = 28/51 (54%) Frame = +1 Query: 124 VLKTPGAEKKTKRELFDALRQELETPVLEKASKAVWELILDNGGLGKEITE 276 V +TPGA R D +R++ +TP + ++ + ++ GGL +++ + Sbjct: 842 VAETPGANPNIMRGWIDQIRKKSDTPTAVLLASSMNDKVMLVGGLSRDLVD 892
>RUVA_PROAC (Q6A8K8) Holliday junction ATP-dependent DNA helicase ruvA (EC| 3.6.1.-) Length = 201 Score = 29.6 bits (65), Expect = 6.0 Identities = 23/84 (27%), Positives = 40/84 (47%) Frame = +1 Query: 61 AQLKANEDMKKNTMMMVEQSKVLKTPGAEKKTKRELFDALRQELETPVLEKASKAVWELI 240 A + N+DM +T ++V + L G + R+ F+ + + + V K + A+ + Sbjct: 36 ASARINQDMSLHTSLVVREES-LTLYGFVEADDRDAFELV--QTASGVGPKLAAAIMS-V 91 Query: 241 LDNGGLGKEITETVEKVFCRLSGI 312 LD L ITE + CR+ GI Sbjct: 92 LDAAQLATAITEEDDATLCRVPGI 115
>MYG_CERMN (Q7LZM4) Myoglobin| Length = 153 Score = 29.6 bits (65), Expect = 6.0 Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 3/69 (4%) Frame = +1 Query: 49 MKIIAQLKANEDMKKNTMMMVEQ-SKVLKTPGAEKKTKRELFD--ALRQELETPVLEKAS 219 +K Q+K +ED+KK+ + ++ Q K+LK G + + L A + ++ LE S Sbjct: 49 LKTPDQMKGSEDLKKHGVTVLTQLGKILKQKGNHESELKPLAQTHATKHKIPVKYLEFIS 108 Query: 220 KAVWELILD 246 +A+ ++I + Sbjct: 109 EAIMKVIAE 117
>MYG_AETPY (Q7LZM5) Myoglobin| Length = 153 Score = 29.6 bits (65), Expect = 6.0 Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 3/69 (4%) Frame = +1 Query: 49 MKIIAQLKANEDMKKNTMMMVEQ-SKVLKTPGAEKKTKRELFD--ALRQELETPVLEKAS 219 +K Q+K +ED+KK+ + ++ Q K+LK G + + L A + ++ LE S Sbjct: 49 LKTPDQMKGSEDLKKHGVTVLTQLGKILKQKGNHESELKPLAQTHATKHKIPVKYLEFIS 108 Query: 220 KAVWELILD 246 +A+ ++I + Sbjct: 109 EAIMKVIAE 117
>MYS2_DICDI (P08799) Myosin-2 heavy chain, non muscle (Myosin II heavy chain, non| muscle) Length = 2116 Score = 29.6 bits (65), Expect = 6.0 Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 4/88 (4%) Frame = +1 Query: 25 DGTVDALRMKIIAQLKA-NEDMKKNTMMMVEQSKVLKTPGAEKKTKRELF---DALRQEL 192 + +DAL ++ A+ KA N+ +K+N + E + K G +KTK + F + L + Sbjct: 1985 EAEIDALTAQVDAEQKAKNQQIKENKKIETELKEYRKKFGESEKTKTKEFLVVEKLETDY 2044 Query: 193 ETPVLEKASKAVWELILDNGGLGKEITE 276 + E A + L ++N L K ++E Sbjct: 2045 KRAKKEAADEQQQRLTVEN-DLRKHLSE 2071
>SYFA_LEPIN (Q8EYR3) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 341 Score = 29.6 bits (65), Expect = 6.0 Identities = 21/56 (37%), Positives = 26/56 (46%) Frame = +1 Query: 16 LKNDGTVDALRMKIIAQLKANEDMKKNTMMMVEQSKVLKTPGAEKKTKRELFDALR 183 LKN ++ K + Q KANE KK + E LK EK+ E FD LR Sbjct: 45 LKNVASLSIEEKKTVGQ-KANELSKKLETFISETKTSLKKKLFEKQAASEFFDVLR 99
>SYFA_LEPIC (Q72M80) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 341 Score = 29.6 bits (65), Expect = 6.0 Identities = 21/56 (37%), Positives = 26/56 (46%) Frame = +1 Query: 16 LKNDGTVDALRMKIIAQLKANEDMKKNTMMMVEQSKVLKTPGAEKKTKRELFDALR 183 LKN ++ K + Q KANE KK + E LK EK+ E FD LR Sbjct: 45 LKNVASLSIEEKKTVGQ-KANELSKKLETFISETKTSLKKKLFEKQAASEFFDVLR 99
>MYG_APTFO (P02199) Myoglobin| Length = 152 Score = 29.3 bits (64), Expect = 7.8 Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 4/84 (4%) Frame = +1 Query: 49 MKIIAQLKANEDMKKNTMMMVEQSKVLKTPGAEKKTKRELFDALRQELETPV--LEKASK 222 +K +++ +EDMKK+ + ++ ++LK G + + L + + PV LE S+ Sbjct: 49 LKTPDEMRGSEDMKKHGVTVLTLGQILKKKGHHEAELKPLSQTHATKHKVPVKYLEFISE 108 Query: 223 AVWELILDN--GGLGKEITETVEK 288 A+ ++I G + E ++K Sbjct: 109 AIMKVIAQKHASNFGADAQEAMKK 132
>SYNG_RAT (Q9JKC9) AP1 gamma subunit-binding protein 1 (Gamma-synergin)| (Fragment) Length = 700 Score = 29.3 bits (64), Expect = 7.8 Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 4/69 (5%) Frame = +1 Query: 292 FCRLSGIDMMPPPASTSGAPQE----KQTNMAVEEGQKDMEMDASEPSSSSRKRPFSDIN 459 F + P PA ++ AP K +++A + G+ ++ + S P+S + F+D Sbjct: 552 FSTSKSVSSRPQPAGSAAAPASLASTKASSLADDFGEFNLFGEYSNPASVGEQDDFADFM 611 Query: 460 VKGAGAIPN 486 G +IP+ Sbjct: 612 AFGNSSIPS 620
>DPOG1_CHICK (Q92076) DNA polymerase gamma subunit 1 (EC 2.7.7.7) (Mitochondrial| DNA polymerase catalytic subunit) (Fragment) Length = 647 Score = 29.3 bits (64), Expect = 7.8 Identities = 11/37 (29%), Positives = 23/37 (62%) Frame = +1 Query: 358 KQTNMAVEEGQKDMEMDASEPSSSSRKRPFSDINVKG 468 +Q+ M E+G ++ ++S+PS P++D+N+ G Sbjct: 122 EQSQMQDEDGLPELVEESSQPSFHHGNGPYNDVNIPG 158
>BAG7_YEAST (Q12128) Rho-GTPase-activating protein BAG7| Length = 409 Score = 29.3 bits (64), Expect = 7.8 Identities = 10/31 (32%), Positives = 22/31 (70%) Frame = +1 Query: 310 IDMMPPPASTSGAPQEKQTNMAVEEGQKDME 402 ++++ P+S G+PQ + ++M+ EG+KD + Sbjct: 4 MNLLSTPSSEEGSPQNRSSSMSSVEGKKDRD 34
>LRFN2_MACFA (Q9BE71) Leucine-rich repeat and fibronectin type-III| domain-containing protein 2 precursor Length = 789 Score = 29.3 bits (64), Expect = 7.8 Identities = 16/73 (21%), Positives = 27/73 (36%) Frame = +1 Query: 265 EITETVEKVFCRLSGIDMMPPPASTSGAPQEKQTNMAVEEGQKDMEMDASEPSSSSRKRP 444 ++ V V+ + +G PP ++ +GAP + + V D + S SS Sbjct: 567 KMAAAVSNVYSQTNGAQPPPPSSAPAGAPPQGPPKVVVRNELLDFTASLARASDSSSSSS 626 Query: 445 FSDINVKGAGAIP 483 G G P Sbjct: 627 LGSGEAAGLGRAP 639
>LRFN2_HUMAN (Q9ULH4) Leucine-rich repeat and fibronectin type-III| domain-containing protein 2 precursor Length = 789 Score = 29.3 bits (64), Expect = 7.8 Identities = 16/73 (21%), Positives = 27/73 (36%) Frame = +1 Query: 265 EITETVEKVFCRLSGIDMMPPPASTSGAPQEKQTNMAVEEGQKDMEMDASEPSSSSRKRP 444 ++ V V+ + +G PP ++ +GAP + + V D + S SS Sbjct: 567 KMAAAVSNVYSQTNGAQPPPPSSAPAGAPPQGPPKVVVRNELLDFTASLARASDSSSSSS 626 Query: 445 FSDINVKGAGAIP 483 G G P Sbjct: 627 LGSGEAAGLGRAP 639
>GLNE_CAUCR (Q9A4S7) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)| ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) Length = 986 Score = 29.3 bits (64), Expect = 7.8 Identities = 18/44 (40%), Positives = 26/44 (59%) Frame = +1 Query: 127 LKTPGAEKKTKRELFDALRQELETPVLEKASKAVWELILDNGGL 258 L+ P A KKT ++ + +RQ +E E+ K W+L LD GGL Sbjct: 833 LRRPRAWKKTAADVIE-MRQLMER---ERPGKGDWDLKLDPGGL 872
>NFM_RAT (P12839) Neurofilament triplet M protein (160 kDa neurofilament| protein) (Neurofilament medium polypeptide) (NF-M) Length = 845 Score = 29.3 bits (64), Expect = 7.8 Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 4/139 (2%) Frame = +1 Query: 64 QLKANEDMKKNTMMMVEQSKVLK-TPGAEKKTKRELFDAL---RQELETPVLEKASKAVW 231 + KA +D +K + E+ +V K +P EK K+E +++ E+PV EKA V Sbjct: 618 EAKAGKDEQKEEEKVEEKKEVAKESPKEEKVEKKEEKPKDVPDKKKAESPVKEKA---VE 674 Query: 232 ELILDNGGLGKEITETVEKVFCRLSGIDMMPPPASTSGAPQEKQTNMAVEEGQKDMEMDA 411 E+I IT++V+ + + QEK A EEG + E+ Sbjct: 675 EMIT--------ITKSVK--------VSLEKDTKEEKPQQQEKVKEKAEEEGGSEEEVGD 718 Query: 412 SEPSSSSRKRPFSDINVKG 468 P S ++ DI + G Sbjct: 719 KSPQESKKE----DIAING 733
>MARK3_HUMAN (P27448) MAP/microtubule affinity-regulating kinase 3 (EC 2.7.11.1)| (Cdc25C-associated protein kinase 1) (cTAK1) (C-TAK1) (Serine/threonine protein kinase p78) (Ser/Thr protein kinase PAR-1) (Protein kinase STK10) Length = 776 Score = 29.3 bits (64), Expect = 7.8 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 13/63 (20%) Frame = +1 Query: 310 IDMMPPPASTSGAPQEKQTNMAVEE--------GQKDMEMDASEPSSSS-----RKRPFS 450 ID+M + QE + M +E G+K E+DAS+ SSSS + RP S Sbjct: 355 IDIMVGMGYSQEEIQESLSKMKYDEITATYLLLGRKSSELDASDSSSSSNLSLAKVRPSS 414 Query: 451 DIN 459 D+N Sbjct: 415 DLN 417 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.131 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,820,035 Number of Sequences: 219361 Number of extensions: 1487675 Number of successful extensions: 6375 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 6098 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6371 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
