| Clone Name | bags18m07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK059081.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-A11, full insert sequence Length = 886 Score = 361 bits (182), Expect = 2e-96 Identities = 302/342 (88%) Strand = Plus / Plus Query: 1 gaggtgctggagtcgctgaagaacgacggcaccgtcgacgcgctccgcatgaagatcatc 60 ||||||||||| ||||| | |||||||||||| |||||||||||||||||||||||||| Sbjct: 198 gaggtgctggattcgctcaccaacgacggcaccatcgacgcgctccgcatgaagatcatc 257 Query: 61 gcccagctcaaggccaacgaggatatgaagaaaaataccatgatgatggtggaacaaagc 120 |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 258 gcccagctcaaggccaacgaggatatgaagaaaaatactatgatgatggtggagcaaagc 317 Query: 121 aaagttctgaagactcctggagctgagaaaaagaccaagagggagctgtttgatgctctt 180 | ||||| || ||||||||||||||||| ||||||||||||||| |||||||||| ||| Sbjct: 318 agggttctaaacactcctggagctgagaagaagaccaagagggagttgtttgatgccctt 377 Query: 181 cgacaagaattggaaactccggttcttgagaaagcctcaaaagcggtttgggagctgata 240 || || |||||||||| ||| || ||||||||||| |||| | || ||||| |||||| Sbjct: 378 cggcaggaattggaaaatccagtccttgagaaagcttcaagggaagtctgggatctgata 437 Query: 241 cttgacaatggtggactagggaaagaaatcaccgagacagttgagaaagtcttctgccgg 300 ||||| ||||||||||| |||||||| || || || || |||||| ||||||||||| Sbjct: 438 cttgagaatggtggactggggaaagagattactgacactattgagagtgtcttctgccgc 497 Query: 301 ctcagcggaattgacatgatgccacctccagcttcaacatct 342 |||||||| || |||||||||||||||||| ||||||||||| Sbjct: 498 ctcagcgggatcgacatgatgccacctccaccttcaacatct 539
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 151 bits (76), Expect = 3e-33 Identities = 106/116 (91%) Strand = Plus / Plus Query: 79 gaggatatgaagaaaaataccatgatgatggtggaacaaagcaaagttctgaagactcct 138 |||||||||||||||||||| |||||||||||||| ||||||| |||||| || |||||| Sbjct: 22986307 gaggatatgaagaaaaatactatgatgatggtggagcaaagcagagttctaaacactcct 22986366 Query: 139 ggagctgagaaaaagaccaagagggagctgtttgatgctcttcgacaagaattgga 194 ||||||||||| ||||||||||||||| |||||||||| ||||| || |||||||| Sbjct: 22986367 ggagctgagaagaagaccaagagggagttgtttgatgcccttcggcaggaattgga 22986422 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Plus Query: 1 gaggtgctggagtcgctgaagaacgacggcaccgtcgacgcgctccgcatgaagatcatc 60 ||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| Sbjct: 22985544 gaggtgctggattcgctcgccaacgacggcaccatcgacgcgctccgcatgaagatcatc 22985603 Query: 61 gcccagctcaaggccaacg 79 ||||||||||||||||||| Sbjct: 22985604 gcccagctcaaggccaacg 22985622 Score = 107 bits (54), Expect = 4e-20 Identities = 99/114 (86%) Strand = Plus / Plus Query: 229 tgggagctgatacttgacaatggtggactagggaaagaaatcaccgagacagttgagaaa 288 ||||| ||||||||||| ||||||||||| |||||||| || || || || |||||| Sbjct: 22987002 tgggatctgatacttgagaatggtggactggggaaagagattactgacactattgagagt 22987061 Query: 289 gtcttctgccggctcagcggaattgacatgatgccacctccagcttcaacatct 342 ||||||||||| |||||||| || |||||||||||||||||| ||||||||||| Sbjct: 22987062 gtcttctgccgcctcagcgggatcgacatgatgccacctccaccttcaacatct 22987115
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 151 bits (76), Expect = 3e-33 Identities = 106/116 (91%) Strand = Plus / Plus Query: 79 gaggatatgaagaaaaataccatgatgatggtggaacaaagcaaagttctgaagactcct 138 |||||||||||||||||||| |||||||||||||| ||||||| |||||| || |||||| Sbjct: 22914498 gaggatatgaagaaaaatactatgatgatggtggagcaaagcagagttctaaacactcct 22914557 Query: 139 ggagctgagaaaaagaccaagagggagctgtttgatgctcttcgacaagaattgga 194 ||||||||||| ||||||||||||||| |||||||||| ||||| || |||||||| Sbjct: 22914558 ggagctgagaagaagaccaagagggagttgtttgatgcccttcggcaggaattgga 22914613 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Plus Query: 1 gaggtgctggagtcgctgaagaacgacggcaccgtcgacgcgctccgcatgaagatcatc 60 ||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| Sbjct: 22913735 gaggtgctggattcgctcgccaacgacggcaccatcgacgcgctccgcatgaagatcatc 22913794 Query: 61 gcccagctcaaggccaacg 79 ||||||||||||||||||| Sbjct: 22913795 gcccagctcaaggccaacg 22913813 Score = 107 bits (54), Expect = 4e-20 Identities = 99/114 (86%) Strand = Plus / Plus Query: 229 tgggagctgatacttgacaatggtggactagggaaagaaatcaccgagacagttgagaaa 288 ||||| ||||||||||| ||||||||||| |||||||| || || || || |||||| Sbjct: 22915193 tgggatctgatacttgagaatggtggactggggaaagagattactgacactattgagagt 22915252 Query: 289 gtcttctgccggctcagcggaattgacatgatgccacctccagcttcaacatct 342 ||||||||||| |||||||| || |||||||||||||||||| ||||||||||| Sbjct: 22915253 gtcttctgccgcctcagcgggatcgacatgatgccacctccaccttcaacatct 22915306
>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155568 Score = 151 bits (76), Expect = 3e-33 Identities = 106/116 (91%) Strand = Plus / Plus Query: 79 gaggatatgaagaaaaataccatgatgatggtggaacaaagcaaagttctgaagactcct 138 |||||||||||||||||||| |||||||||||||| ||||||| |||||| || |||||| Sbjct: 95584 gaggatatgaagaaaaatactatgatgatggtggagcaaagcagagttctaaacactcct 95643 Query: 139 ggagctgagaaaaagaccaagagggagctgtttgatgctcttcgacaagaattgga 194 ||||||||||| ||||||||||||||| |||||||||| ||||| || |||||||| Sbjct: 95644 ggagctgagaagaagaccaagagggagttgtttgatgcccttcggcaggaattgga 95699 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Plus Query: 1 gaggtgctggagtcgctgaagaacgacggcaccgtcgacgcgctccgcatgaagatcatc 60 ||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| Sbjct: 94821 gaggtgctggattcgctcgccaacgacggcaccatcgacgcgctccgcatgaagatcatc 94880 Query: 61 gcccagctcaaggccaacg 79 ||||||||||||||||||| Sbjct: 94881 gcccagctcaaggccaacg 94899 Score = 107 bits (54), Expect = 4e-20 Identities = 99/114 (86%) Strand = Plus / Plus Query: 229 tgggagctgatacttgacaatggtggactagggaaagaaatcaccgagacagttgagaaa 288 ||||| ||||||||||| ||||||||||| |||||||| || || || || |||||| Sbjct: 96279 tgggatctgatacttgagaatggtggactggggaaagagattactgacactattgagagt 96338 Query: 289 gtcttctgccggctcagcggaattgacatgatgccacctccagcttcaacatct 342 ||||||||||| |||||||| || |||||||||||||||||| ||||||||||| Sbjct: 96339 gtcttctgccgcctcagcgggatcgacatgatgccacctccaccttcaacatct 96392
>ref|NM_104520.1| Arabidopsis thaliana unknown protein AT1G56420 mRNA, complete cds Length = 552 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 121 aaagttctgaagactcctggagctgagaaaaagaccaagagggagctgtttgatgctctt 180 ||||||||||| || ||||| ||||||||| |||| || || || || |||||||||||| Sbjct: 151 aaagttctgaacacacctggtgctgagaaacagactaaaagagaactctttgatgctctt 210 Query: 181 cgacaagaa 189 || |||||| Sbjct: 211 cgccaagaa 219
>gb|AC058785.8|AC058785 Arabidopsis thaliana chromosome 1 BAC F13N6 genomic sequence, complete sequence Length = 90698 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 121 aaagttctgaagactcctggagctgagaaaaagaccaagagggagctgtttgatgctctt 180 ||||||||||| || ||||| ||||||||| |||| || || || || |||||||||||| Sbjct: 34013 aaagttctgaacacacctggtgctgagaaacagactaaaagagaactctttgatgctctt 33954 Query: 181 cgacaagaa 189 || |||||| Sbjct: 33953 cgccaagaa 33945
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Plus Query: 53 agatcatcgcccagctcaaggcca 76 |||||||||||||||||||||||| Sbjct: 3483047 agatcatcgcccagctcaaggcca 3483070
>gb|AC140469.2| Mus musculus BAC clone RP24-396D20 from chromosome 19, complete sequence Length = 180376 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 86 tgaagaaaaataccatgatgatg 108 ||||||||||||||||||||||| Sbjct: 42468 tgaagaaaaataccatgatgatg 42446
>gb|AC133576.10| Mus musculus chromosome 19, clone RP23-204H15, complete sequence Length = 213096 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 86 tgaagaaaaataccatgatgatg 108 ||||||||||||||||||||||| Sbjct: 195720 tgaagaaaaataccatgatgatg 195698
>emb|AJ001045.2|BEPAT1 Blastocladiella emersonii PAT1 gene for P-type cation-transporting ATPase Length = 3747 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 55 atcatcgcccagctcaaggccaacga 80 |||||||||||||||||| ||||||| Sbjct: 1040 atcatcgcccagctcaagaccaacga 1065
>emb|CR855616.2| Xenopus tropicalis finished cDNA, clone TEgg051p17 Length = 2422 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 88 aagaaaaataccatgatgatggtggaacaa 117 ||||||||||| ||| |||||||||||||| Sbjct: 2271 aagaaaaatactatggtgatggtggaacaa 2300
>emb|CR974483.16| Mouse DNA sequence from clone RP23-296D10 on chromosome 17, complete sequence Length = 125345 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 98 ccatgatgatggtggaacaaag 119 |||||||||||||||||||||| Sbjct: 93169 ccatgatgatggtggaacaaag 93148
>gb|AC153622.11| Mus musculus 6 BAC RP23-301N17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 195335 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 522 tgggaactaggagagctggtg 542 ||||||||||||||||||||| Sbjct: 73087 tgggaactaggagagctggtg 73107
>emb|CT009544.6| Mouse DNA sequence from clone RP23-32E1 on chromosome 13, complete sequence Length = 158218 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 439 aggcctttcagtgacatcaat 459 ||||||||||||||||||||| Sbjct: 144703 aggcctttcagtgacatcaat 144683
>gb|AC099930.11| Mus musculus chromosome 7, clone RP23-17C12, complete sequence Length = 224617 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 422 catcttcctcaaggaagaggc 442 ||||||||||||||||||||| Sbjct: 138493 catcttcctcaaggaagaggc 138513
>gb|AC074327.6| Homo sapiens chromosome 10 clone RP11-556E13, complete sequence Length = 189250 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 agaaggatatggaaatggatg 409 ||||||||||||||||||||| Sbjct: 102219 agaaggatatggaaatggatg 102239
>emb|AL136171.17| Human DNA sequence from clone RP4-584N17 on chromosome 1q42.2-43 Contains part of the DISC1 gene for disrupted in schizophrenia 1, complete sequence Length = 133968 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 gaggatatgaagaaaaataccatga 103 |||||||||||| |||||||||||| Sbjct: 68001 gaggatatgaaggaaaataccatga 68025
>gb|AC034236.5| Homo sapiens chromosome 5 clone CTD-2287O16, complete sequence Length = 162384 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 83 atatgaagaaaaataccatgatgat 107 |||||||||||||||| |||||||| Sbjct: 7706 atatgaagaaaaatactatgatgat 7682
>gb|AC155295.2| Mus musculus BAC clone RP24-329L16 from chromosome 13, complete sequence Length = 166534 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 aggcctttcagtgacatcaat 459 ||||||||||||||||||||| Sbjct: 18116 aggcctttcagtgacatcaat 18136
>dbj|AK048412.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130058F07 product:unclassifiable, full insert sequence Length = 680 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 tcctcaagagaagcaaacaaa 368 ||||||||||||||||||||| Sbjct: 172 tcctcaagagaagcaaacaaa 192
>gb|AC159138.6| Mus musculus BAC RP23-315F23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 180124 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 522 tgggaactaggagagctggtg 542 ||||||||||||||||||||| Sbjct: 159117 tgggaactaggagagctggtg 159137
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 gctgaagaacgacggcaccgt 35 ||||||||||||||||||||| Sbjct: 5732567 gctgaagaacgacggcaccgt 5732547
>gb|AC154215.1| Mus musculus BAC clone RP24-134E18 from 13, complete sequence Length = 171014 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 439 aggcctttcagtgacatcaat 459 ||||||||||||||||||||| Sbjct: 8551 aggcctttcagtgacatcaat 8531
>emb|AL954325.8| Mouse DNA sequence from clone RP23-416H10 on chromosome 2, complete sequence Length = 195457 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 tcctcaagagaagcaaacaaa 368 ||||||||||||||||||||| Sbjct: 174129 tcctcaagagaagcaaacaaa 174149
>ref|XM_322949.1| Neurospora crassa OR74A related to glutaminase A [MIPS] (NCU03648.1) partial mRNA Length = 2580 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 ccatcatcttcctcaaggaa 437 |||||||||||||||||||| Sbjct: 1148 ccatcatcttcctcaaggaa 1167
>ref|XM_956282.1| Neurospora crassa OR74A related to glutaminase A [MIPS] (NCU03648.1) partial mRNA Length = 2580 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 ccatcatcttcctcaaggaa 437 |||||||||||||||||||| Sbjct: 1148 ccatcatcttcctcaaggaa 1167
>ref|NM_018115.1| Homo sapiens SDA1 domain containing 1 (SDAD1), mRNA Length = 2755 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 524 ggaactaggagagctggtgatgtt 547 |||||||| ||||||||||||||| Sbjct: 18 ggaactagcagagctggtgatgtt 41
>gb|AC127254.3| Mus musculus BAC clone RP24-290D19 from chromosome 9, complete sequence Length = 187995 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 tgatggtggaacaaagcaaa 123 |||||||||||||||||||| Sbjct: 162328 tgatggtggaacaaagcaaa 162347
>ref|XM_673205.1| Plasmodium berghei strain ANKA hypothetical protein (PB000962.00.0) partial mRNA Length = 975 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 atgaagaaaaataccatgat 104 |||||||||||||||||||| Sbjct: 677 atgaagaaaaataccatgat 696
>gb|AC149474.15| Medicago truncatula clone mth2-122l24, complete sequence Length = 129008 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 202 gttcttgagaaagcctcaaaagcggtttggga 233 |||||||||||||| |||||| | |||||||| Sbjct: 70797 gttcttgagaaagcatcaaaatcagtttggga 70828
>gb|AC149080.14| Medicago truncatula clone mth2-75j5, complete sequence Length = 96907 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 202 gttcttgagaaagcctcaaaagcggtttggga 233 |||||||||||||| |||||| | |||||||| Sbjct: 242 gttcttgagaaagcatcaaaatcagtttggga 211
>emb|AL691514.5| Human DNA sequence from clone RP11-105M16 on chromosome 10, complete sequence Length = 154348 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 acatgatgccacctccagct 333 |||||||||||||||||||| Sbjct: 93351 acatgatgccacctccagct 93370
>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16 Length = 349315 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcatcgcccagctcaaggcc 75 |||||||||||||||||||| Sbjct: 84965 tcatcgcccagctcaaggcc 84946
>emb|AL451013.1|NCB2F7 Neurospora crassa DNA linkage group V BAC clone B2F7 Length = 75163 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 ccatcatcttcctcaaggaa 437 |||||||||||||||||||| Sbjct: 56527 ccatcatcttcctcaaggaa 56546
>emb|BX511087.12| Zebrafish DNA sequence from clone DKEY-261O7 in linkage group 17, complete sequence Length = 184012 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 500 accagcatgacggtcatgaggatg 523 |||||||||||||||||| ||||| Sbjct: 22764 accagcatgacggtcatggggatg 22787
>ref|NM_205459.1| Gallus gallus myosin, light polypeptide kinase (MYLK), mRNA Length = 7639 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctgagaaaaagaccaaga 160 |||||||||||||||||||| Sbjct: 3560 agctgagaaaaagaccaaga 3579
>emb|X52876.1|GGFMYLCK G.gallus mRNA for fibroblast myosin light chain kinase Length = 7631 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctgagaaaaagaccaaga 160 |||||||||||||||||||| Sbjct: 3552 agctgagaaaaagaccaaga 3571
>gb|AC108169.5| Homo sapiens BAC clone RP11-1236J3 from 4, complete sequence Length = 111806 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 aggagggtcagaaggatatg 399 |||||||||||||||||||| Sbjct: 29787 aggagggtcagaaggatatg 29768
>dbj|AK001360.1| Homo sapiens cDNA FLJ10498 fis, clone NT2RP2000328 Length = 2755 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 524 ggaactaggagagctggtgatgtt 547 |||||||| ||||||||||||||| Sbjct: 18 ggaactagcagagctggtgatgtt 41
>ref|NM_079951.2| Drosophila melanogaster Dynamitin CG8269-RA (Dmn), mRNA Length = 1350 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 aggtgctggagtcgctgaag 21 |||||||||||||||||||| Sbjct: 551 aggtgctggagtcgctgaag 570
>ref|XM_694752.1| PREDICTED: Danio rerio similar to Putative eukaryotic translation initiation factor 3 subunit (eIF-3) (LOC571186), partial mRNA Length = 1999 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 401 aaatggatgcctctgaaccatcatcttc 428 ||||||||||||||||||| || ||||| Sbjct: 139 aaatggatgcctctgaaccctcttcttc 112
>ref|XM_685507.1| PREDICTED: Danio rerio similar to 5-hydroxytryptamine receptor 7 isoform d (LOC562111), mRNA Length = 1557 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 500 accagcatgacggtcatgaggatg 523 |||||||||||||||||| ||||| Sbjct: 839 accagcatgacggtcatggggatg 816
>gb|AY061092.1| Drosophila melanogaster LD07994 full length cDNA Length = 1359 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 aggtgctggagtcgctgaag 21 |||||||||||||||||||| Sbjct: 536 aggtgctggagtcgctgaag 555
>emb|BX649437.8| Zebrafish DNA sequence from clone DKEY-28J9 in linkage group 16, complete sequence Length = 158346 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 500 accagcatgacggtcatgaggatg 523 |||||||||||||||||| ||||| Sbjct: 32248 accagcatgacggtcatggggatg 32225
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 gaaccatcatcttcctcaag 434 |||||||||||||||||||| Sbjct: 30555903 gaaccatcatcttcctcaag 30555884
>gb|AF276733.1|AF276733 Lilium superbum phytochrome C (PHYC) gene, partial cds Length = 1183 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 aggatatggaaatggatgcc 411 |||||||||||||||||||| Sbjct: 1157 aggatatggaaatggatgcc 1176
>gb|AC007471.4|AC007471 Drosophila melanogaster, chromosome 2R, region 44F-45A, BAC clone BACR02C23, complete sequence Length = 168601 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 aggtgctggagtcgctgaag 21 |||||||||||||||||||| Sbjct: 85537 aggtgctggagtcgctgaag 85556
>gb|AC024559.15| Homo sapiens 3 BAC RP11-407B7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165016 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ctcctggagctgagaaaaag 153 |||||||||||||||||||| Sbjct: 39927 ctcctggagctgagaaaaag 39908
>gb|AF081666.1|AF081666 Synthetic construct myosin light chain kinase mutant rMLCK21 gene, complete cds Length = 1812 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctgagaaaaagaccaaga 160 |||||||||||||||||||| Sbjct: 66 agctgagaaaaagaccaaga 85
>gb|AF081665.1|AF081665 Synthetic construct myosin light chain kinase mutant rMLCK20 gene, complete cds Length = 1812 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctgagaaaaagaccaaga 160 |||||||||||||||||||| Sbjct: 66 agctgagaaaaagaccaaga 85
>gb|AF081664.1|AF081664 Synthetic construct myosin light chain kinase mutant rMLCK19 gene, complete cds Length = 1812 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctgagaaaaagaccaaga 160 |||||||||||||||||||| Sbjct: 66 agctgagaaaaagaccaaga 85
>gb|AF081663.1|AF081663 Synthetic construct myosin light chain kinase mutant rMLCK18 gene, complete cds Length = 1812 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctgagaaaaagaccaaga 160 |||||||||||||||||||| Sbjct: 66 agctgagaaaaagaccaaga 85
>gb|AF081662.1|AF081662 Synthetic construct myosin light chain kinase mutant rMLCK17 gene, complete cds Length = 1812 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctgagaaaaagaccaaga 160 |||||||||||||||||||| Sbjct: 66 agctgagaaaaagaccaaga 85
>gb|AF081661.1|AF081661 Synthetic construct myosin light chain kinase mutant rMLCK16 gene, complete cds Length = 1665 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctgagaaaaagaccaaga 160 |||||||||||||||||||| Sbjct: 66 agctgagaaaaagaccaaga 85
>gb|AF081660.1|AF081660 Synthetic construct myosin light chain kinase mutant rMLCK15 gene, complete cds Length = 1811 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctgagaaaaagaccaaga 160 |||||||||||||||||||| Sbjct: 66 agctgagaaaaagaccaaga 85
>gb|AF081659.1|AF081659 Synthetic construct myosin light chain kinase mutant rMLCK14 gene, complete cds Length = 1811 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctgagaaaaagaccaaga 160 |||||||||||||||||||| Sbjct: 66 agctgagaaaaagaccaaga 85
>gb|AF081658.1|AF081658 Synthetic construct myosin light chain kinase mutant rMLCK13 gene, complete cds Length = 1812 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctgagaaaaagaccaaga 160 |||||||||||||||||||| Sbjct: 66 agctgagaaaaagaccaaga 85
>gb|AF081657.1|AF081657 Synthetic construct myosin light chain kinase mutant rMLCK12 gene, complete cds Length = 1812 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctgagaaaaagaccaaga 160 |||||||||||||||||||| Sbjct: 66 agctgagaaaaagaccaaga 85
>gb|AF081656.1|AF081656 Synthetic construct myosin light chain kinase mutant rMLCK11 gene, complete cds Length = 1812 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctgagaaaaagaccaaga 160 |||||||||||||||||||| Sbjct: 66 agctgagaaaaagaccaaga 85
>gb|AF081655.1|AF081655 Synthetic construct myosin light chain kinase mutant rMLCK10 gene, complete cds Length = 1812 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctgagaaaaagaccaaga 160 |||||||||||||||||||| Sbjct: 66 agctgagaaaaagaccaaga 85
>gb|AF081654.1|AF081654 Synthetic construct myosin light chain kinase mutant rMLCK9 gene, complete cds Length = 1812 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctgagaaaaagaccaaga 160 |||||||||||||||||||| Sbjct: 66 agctgagaaaaagaccaaga 85
>gb|AF081653.1|AF081653 Synthetic construct myosin light chain kinase mutant rMLCK8 gene, complete cds Length = 1812 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctgagaaaaagaccaaga 160 |||||||||||||||||||| Sbjct: 66 agctgagaaaaagaccaaga 85
>gb|AF081652.1|AF081652 Synthetic construct myosin light chain kinase mutant rMLCK7 gene, complete cds Length = 1812 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctgagaaaaagaccaaga 160 |||||||||||||||||||| Sbjct: 66 agctgagaaaaagaccaaga 85
>gb|AF081651.1|AF081651 Synthetic construct myosin light chain kinase mutant rMLCK6 gene, complete cds Length = 1812 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctgagaaaaagaccaaga 160 |||||||||||||||||||| Sbjct: 66 agctgagaaaaagaccaaga 85
>gb|AF081650.1|AF081650 Synthetic construct myosin light chain kinase mutant rMLCK5 gene, complete cds Length = 1812 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctgagaaaaagaccaaga 160 |||||||||||||||||||| Sbjct: 66 agctgagaaaaagaccaaga 85
>gb|AF081649.1|AF081649 Synthetic construct myosin light chain kinase mutant rMLCK4 gene, complete cds Length = 1812 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctgagaaaaagaccaaga 160 |||||||||||||||||||| Sbjct: 66 agctgagaaaaagaccaaga 85
>gb|AF081648.1|AF081648 Synthetic construct myosin light chain kinase mutant rMLCK3 gene, complete cds Length = 1812 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctgagaaaaagaccaaga 160 |||||||||||||||||||| Sbjct: 66 agctgagaaaaagaccaaga 85
>gb|AF081647.1|AF081647 Synthetic construct myosin light chain kinase mutant rMLCK2 gene, complete cds Length = 1812 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctgagaaaaagaccaaga 160 |||||||||||||||||||| Sbjct: 66 agctgagaaaaagaccaaga 85
>gb|AC093794.2| Homo sapiens BAC clone RP11-288L10 from 2, complete sequence Length = 31426 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 376 gtagaggagggtcagaaggatatggaaa 403 |||||||| ||| ||||||||||||||| Sbjct: 28135 gtagaggaaggtgagaaggatatggaaa 28108
>dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0069C14 Length = 150579 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 gaaccatcatcttcctcaag 434 |||||||||||||||||||| Sbjct: 54466 gaaccatcatcttcctcaag 54447
>emb|X52877.1|GGRMLCK Chicken rMLCK mRNA for recombinant myosin light chain kinase Length = 1824 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctgagaaaaagaccaaga 160 |||||||||||||||||||| Sbjct: 71 agctgagaaaaagaccaaga 90
>dbj|AK122176.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148L17, full insert sequence Length = 3644 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 gaaccatcatcttcctcaag 434 |||||||||||||||||||| Sbjct: 1047 gaaccatcatcttcctcaag 1028
>dbj|AK111500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000K24, full insert sequence Length = 3638 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 gaaccatcatcttcctcaag 434 |||||||||||||||||||| Sbjct: 1028 gaaccatcatcttcctcaag 1009
>gb|AE003835.4| Drosophila melanogaster chromosome 2R, section 15 of 73 of the complete sequence Length = 271696 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 aggtgctggagtcgctgaag 21 |||||||||||||||||||| Sbjct: 98657 aggtgctggagtcgctgaag 98676
>gb|AC025500.8| Mus musculus chromosome 9, clone RP23-47M24, complete sequence Length = 112924 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 tgatggtggaacaaagcaaa 123 |||||||||||||||||||| Sbjct: 7387 tgatggtggaacaaagcaaa 7406
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gaggtgctggagtcgctgaa 20 |||||||||||||||||||| Sbjct: 4610348 gaggtgctggagtcgctgaa 4610367 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gaggtgctggagtcgctgaa 20 |||||||||||||||||||| Sbjct: 2992238 gaggtgctggagtcgctgaa 2992219
>gb|AF045271.1|GGMLCK17 Gallus gallus smooth muscle/non-muscle myosin light chain kinase gene, exon 17 Length = 153 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctgagaaaaagaccaaga 160 |||||||||||||||||||| Sbjct: 59 agctgagaaaaagaccaaga 78
>gb|AC158938.13| Mus musculus chromosome 3, clone RP23-304F19, complete sequence Length = 232469 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 catcttcctcaaggaagagg 441 |||||||||||||||||||| Sbjct: 15842 catcttcctcaaggaagagg 15861
>emb|AL606746.17| Mouse DNA sequence from clone RP23-423J10 on chromosome 3, complete sequence Length = 203345 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 catcttcctcaaggaagagg 441 |||||||||||||||||||| Sbjct: 115125 catcttcctcaaggaagagg 115144
>gb|M31048.1|CHKSMMLCK Chicken smooth muscle myosin light chain kinase mRNA, complete cds Length = 3220 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctgagaaaaagaccaaga 160 |||||||||||||||||||| Sbjct: 1051 agctgagaaaaagaccaaga 1070
>dbj|AB007993.1| Chlorococcum littorale mRNA for HCR2, complete cds Length = 3068 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 tgatacttgacaatggtgga 255 |||||||||||||||||||| Sbjct: 846 tgatacttgacaatggtgga 827 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,788,652 Number of Sequences: 3902068 Number of extensions: 5788652 Number of successful extensions: 117356 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 81 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117043 Number of HSP's gapped (non-prelim): 312 length of query: 559 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 536 effective length of database: 17,143,297,704 effective search space: 9188807569344 effective search space used: 9188807569344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)