ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags18m06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY613786.1| Aegilops tauschii isolate TA1691 clone 1 LZ-NBS-L... 70 8e-09
2gb|AY613785.1| Aegilops tauschii isolate TA1704 clone 1 LZ-NBS-L... 70 8e-09
3gb|AY613783.1| Aegilops tauschii isolate TA2468 clone 1 LZ-NBS-L... 70 8e-09
4gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR c... 70 8e-09
5gb|AF149114.1|AF149114 Triticum aestivum stripe rust resistance ... 56 1e-04
6gb|AF149112.1|AF149112 Triticum aestivum stripe rust resistance ... 56 1e-04
7gb|AF149113.1|AF149113 Triticum aestivum candidate stripe rust r... 50 0.008
8gb|AC128706.4| Oryza sativa (japonica cultivar-group) chromosome... 48 0.030
9gb|AC134624.4| Oryza sativa (japonica cultivar-group) chromosome... 48 0.030
10dbj|AK103015.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.030
11gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.030
12gb|AF509534.1| Aegilops tauschii NBS-LRR-like gene sequence 46 0.12
13gb|AF509533.1| Aegilops tauschii putative NBS-LRR resistance pro... 46 0.12
14gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.3
15gb|AE016828.2| Coxiella burnetii RSA 493, complete genome 40 7.3
16gb|AC090589.9| Homo sapiens chromosome 11, clone RP11-390K5, com... 40 7.3
17gb|S78750.1| Ifa-1=interferon-alpha 1 [hamsters, Genomic, 833 nt] 40 7.3
18gb|AC157950.2| Mus musculus BAC clone RP23-128A23 from chromosom... 40 7.3
19gb|AC157996.2| Mus musculus BAC clone RP24-194J17 from chromosom... 40 7.3
20dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
21dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
22gb|AC092667.3| Homo sapiens BAC clone RP11-549H5 from 2, complet... 40 7.3
23dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
24dbj|BS000059.1| Pan troglodytes chromosome 22 clone:RP43-022N17,... 40 7.3
25emb|BX284648.12| Mouse DNA sequence from clone RP23-300F1 on chr... 40 7.3
26emb|BX276085.8| Zebrafish DNA sequence from clone CH211-194B5 in... 40 7.3
27dbj|AP001007.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.3
28gb|AY449459.1| Oikopleura dioica clone BACOIKO003 5xk14, complet... 40 7.3
29gb|AC018410.24| Homo sapiens chromosome 11, clone RP11-17G12, co... 40 7.3 
>gb|AY613786.1| Aegilops tauschii isolate TA1691 clone 1 LZ-NBS-LRR class RGA gene,
            complete cds
          Length = 9601

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 104/127 (81%)
 Strand = Plus / Plus

                                                                        
Query: 136  atcattggaaggatatatgcagtttgtttcacttgagatatctgagtttaaagggtacat 195
            |||||| ||||||||| ||||  || ||||||||||| ||||||||| |||| || ||||
Sbjct: 5487 atcatttgaaggatatttgcaagttatttcacttgaggtatctgagtctaaaagggacat 5546

                                                                        
Query: 196  ccatcacgaagatcccgaaaggggttaacaatctgcaatttctgcatgtgctggacatca 255
            | |||||  |||||||||||| | |   |||||| ||  ||||||| ||||| ||||| |
Sbjct: 5547 ctatcactgagatcccgaaagagatcggcaatctacagcttctgcaagtgctagacataa 5606

                   
Query: 256  ggtccac 262
            |||||||
Sbjct: 5607 ggtccac 5613



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 17   cttgtcccatgtgaggtcacttactgt 43
            ||||||||||||||| |||||||||||
Sbjct: 5368 cttgtcccatgtgagatcacttactgt 5394
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>gb|AY613785.1| Aegilops tauschii isolate TA1704 clone 1 LZ-NBS-LRR class gene,
            complete cds
          Length = 11607

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 104/127 (81%)
 Strand = Plus / Plus

                                                                        
Query: 136  atcattggaaggatatatgcagtttgtttcacttgagatatctgagtttaaagggtacat 195
            |||||| ||||||||| ||||  || ||||||||||| ||||||||| |||| || ||||
Sbjct: 5504 atcatttgaaggatatttgcaagttatttcacttgaggtatctgagtctaaaagggacat 5563

                                                                        
Query: 196  ccatcacgaagatcccgaaaggggttaacaatctgcaatttctgcatgtgctggacatca 255
            | |||||  |||||||||||| | |   |||||| ||  ||||||| ||||| ||||| |
Sbjct: 5564 ctatcactgagatcccgaaagagatcggcaatctacagcttctgcaagtgctagacataa 5623

                   
Query: 256  ggtccac 262
            |||||||
Sbjct: 5624 ggtccac 5630



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 17   cttgtcccatgtgaggtcacttactgt 43
            ||||||||||||||| |||||||||||
Sbjct: 5385 cttgtcccatgtgagatcacttactgt 5411
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>gb|AY613783.1| Aegilops tauschii isolate TA2468 clone 1 LZ-NBS-LRR class RGA and
            NBS-LRR class RGA genes, complete cds
          Length = 15042

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 104/127 (81%)
 Strand = Plus / Plus

                                                                        
Query: 136  atcattggaaggatatatgcagtttgtttcacttgagatatctgagtttaaagggtacat 195
            |||||| ||||||||| ||||  || ||||||||||| ||||||||| |||| || ||||
Sbjct: 5508 atcatttgaaggatatttgcaagttatttcacttgaggtatctgagtctaaaagggacat 5567

                                                                        
Query: 196  ccatcacgaagatcccgaaaggggttaacaatctgcaatttctgcatgtgctggacatca 255
            | |||||  |||||||||||| | |   |||||| ||  ||||||| ||||| ||||| |
Sbjct: 5568 ctatcactgagatcccgaaagagatcggcaatctacagcttctgcaagtgctagacataa 5627

                   
Query: 256  ggtccac 262
            |||||||
Sbjct: 5628 ggtccac 5634



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 17   cttgtcccatgtgaggtcacttactgt 43
            ||||||||||||||| |||||||||||
Sbjct: 5389 cttgtcccatgtgagatcacttactgt 5415
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>gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR class RGA, HCBT-like
             putative defense response protein, and putative alliin
             lyase genes, complete cds; and unknown genes
          Length = 106618

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 104/127 (81%)
 Strand = Plus / Plus

                                                                         
Query: 136   atcattggaaggatatatgcagtttgtttcacttgagatatctgagtttaaagggtacat 195
             |||||| ||||||||| ||||  || ||||||||||| ||||||||| |||| || ||||
Sbjct: 18511 atcatttgaaggatatttgcaagttatttcacttgaggtatctgagtctaaaagggacat 18570

                                                                         
Query: 196   ccatcacgaagatcccgaaaggggttaacaatctgcaatttctgcatgtgctggacatca 255
             | |||||  |||||||||||| | |   |||||| ||  ||||||| ||||| ||||| |
Sbjct: 18571 ctatcactgagatcccgaaagagatcggcaatctacagcttctgcaagtgctagacataa 18630

                    
Query: 256   ggtccac 262
             |||||||
Sbjct: 18631 ggtccac 18637



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 17    cttgtcccatgtgaggtcacttactgt 43
             ||||||||||||||| |||||||||||
Sbjct: 18392 cttgtcccatgtgagatcacttactgt 18418
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>gb|AF149114.1|AF149114 Triticum aestivum stripe rust resistance protein Yr10 (Yr10) mRNA,
            complete cds
          Length = 2475

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 157/200 (78%)
 Strand = Plus / Plus

                                                                        
Query: 17   cttgtcccatgtgaggtcacttactgtttgtagtccagccttcaatttcttgccagcact 76
            ||||||||||||||||||||||||||| |  |||  || | ||| |||  || | |||||
Sbjct: 1662 cttgtcccatgtgaggtcacttactgtgttcagtaaagacctcagtttgctgtcggcact 1721

                                                                        
Query: 77   ttctggttttccagttttgcgtgtgttggatttaactgactgcaagcaagtggataacaa 136
            ||| |||||||  ||  ||||||  |||||||||| ||  ||  || |||||| |||  |
Sbjct: 1722 ttcaggttttcttgtcctgcgtgcattggatttaagtggttgtgaggaagtgggtaatca 1781

                                                                        
Query: 137  tcattggaaggatatatgcagtttgtttcacttgagatatctgagtttaaagggtacatc 196
            |||   |||||| || |||| ||| ||||||||||| ||||||||| || | || |||||
Sbjct: 1782 tcacatgaaggacatttgcaatttatttcacttgaggtatctgagtctagaagggacatc 1841

                                
Query: 197  catcacgaagatcccgaaag 216
             |||||  ||||||||||||
Sbjct: 1842 tatcactgagatcccgaaag 1861



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                         
Query: 407  actgggagaggaagaccttcaagttctcgggagcataccgtctct 451
            |||| ||||||||||||| ||| | || |||||||| ||||||||
Sbjct: 2052 actgagagaggaagacctccaaatacttgggagcatgccgtctct 2096
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>gb|AF149112.1|AF149112 Triticum aestivum stripe rust resistance protein Yr10 (Yr10) gene,
            complete cds
          Length = 3630

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 157/200 (78%)
 Strand = Plus / Plus

                                                                        
Query: 17   cttgtcccatgtgaggtcacttactgtttgtagtccagccttcaatttcttgccagcact 76
            ||||||||||||||||||||||||||| |  |||  || | ||| |||  || | |||||
Sbjct: 2817 cttgtcccatgtgaggtcacttactgtgttcagtaaagacctcagtttgctgtcggcact 2876

                                                                        
Query: 77   ttctggttttccagttttgcgtgtgttggatttaactgactgcaagcaagtggataacaa 136
            ||| |||||||  ||  ||||||  |||||||||| ||  ||  || |||||| |||  |
Sbjct: 2877 ttcaggttttcttgtcctgcgtgcattggatttaagtggttgtgaggaagtgggtaatca 2936

                                                                        
Query: 137  tcattggaaggatatatgcagtttgtttcacttgagatatctgagtttaaagggtacatc 196
            |||   |||||| || |||| ||| ||||||||||| ||||||||| || | || |||||
Sbjct: 2937 tcacatgaaggacatttgcaatttatttcacttgaggtatctgagtctagaagggacatc 2996

                                
Query: 197  catcacgaagatcccgaaag 216
             |||||  ||||||||||||
Sbjct: 2997 tatcactgagatcccgaaag 3016



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                         
Query: 407  actgggagaggaagaccttcaagttctcgggagcataccgtctct 451
            |||| ||||||||||||| ||| | || |||||||| ||||||||
Sbjct: 3207 actgagagaggaagacctccaaatacttgggagcatgccgtctct 3251
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>gb|AF149113.1|AF149113 Triticum aestivum candidate stripe rust resistance Yr10 pseudogene
            4E, complete sequence
          Length = 3662

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                     
Query: 19   tgtcccatgtgaggtcacttactgt 43
            |||||||||||||||||||||||||
Sbjct: 2737 tgtcccatgtgaggtcacttactgt 2761
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>gb|AC128706.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0063F24,
              complete sequence
          Length = 152738

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                  
Query: 116    ctgcaagcaagtggataacaatcattggaaggatat 151
              ||||||| |||||||||||||||| || ||||||||
Sbjct: 123935 ctgcaagaaagtggataacaatcactgcaaggatat 123900
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>gb|AC134624.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0041I05, complete sequence
          Length = 148785

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 116   ctgcaagcaagtggataacaatcattggaaggatat 151
             ||||||| |||||||||||||||| || ||||||||
Sbjct: 21110 ctgcaagaaagtggataacaatcactgcaaggatat 21075
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>dbj|AK103015.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116M08, full
            insert sequence
          Length = 1820

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                
Query: 116  ctgcaagcaagtggataacaatcattggaaggatat 151
            ||||||| |||||||||||||||| || ||||||||
Sbjct: 1538 ctgcaagaaagtggataacaatcactgcaaggatat 1573
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                    
Query: 116      ctgcaagcaagtggataacaatcattggaaggatat 151
                ||||||| |||||||||||||||| || ||||||||
Sbjct: 19901473 ctgcaagaaagtggataacaatcactgcaaggatat 19901438



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 75       ctttctggttttccagttttgcgtgtgttggattta 110
                ||||| || |||| |||||||||||| |||||||||
Sbjct: 18490011 ctttcgggctttcgagttttgcgtgtcttggattta 18489976
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>gb|AF509534.1| Aegilops tauschii NBS-LRR-like gene sequence
          Length = 5171

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 17   cttgtcccatgtgaggtcacttactgt 43
            ||||||||||||||| |||||||||||
Sbjct: 3319 cttgtcccatgtgagatcacttactgt 3345



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                    
Query: 412  gagaggaagaccttcaagttctcgggagcataccgtctct 451
            ||||||||||||| ||| | || |||||||| ||||||||
Sbjct: 3713 gagaggaagacctccaaatacttgggagcatgccgtctct 3752
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>gb|AF509533.1| Aegilops tauschii putative NBS-LRR resistance protein gene, complete
            cds
          Length = 6256

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 17   cttgtcccatgtgaggtcacttactgt 43
            ||||||||||||||| |||||||||||
Sbjct: 3961 cttgtcccatgtgagatcacttactgt 3987



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                         
Query: 407  actgggagaggaagaccttcaagttctcgggagcataccgtctct 451
            |||| ||||||||||||| ||| | || |||||||| ||||||||
Sbjct: 4351 actgagagaggaagacctccaaatacttgggagcatgccgtctct 4395
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>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0056I10, complete sequence
          Length = 158833

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 75    ctttctggttttccagttttgcgtgtgttggattta 110
             ||||| || |||| |||||||||||| |||||||||
Sbjct: 65975 ctttcgggctttcgagttttgcgtgtcttggattta 65940
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>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome
          Length = 1995281

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    ccaaggtggatgtgctccat 370
              ||||||||||||||||||||
Sbjct: 805403 ccaaggtggatgtgctccat 805384
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>gb|AC090589.9| Homo sapiens chromosome 11, clone RP11-390K5, complete sequence
          Length = 190017

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     tcaatttcttgccagcactt 77
              ||||||||||||||||||||
Sbjct: 180078 tcaatttcttgccagcactt 180097
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>gb|S78750.1| Ifa-1=interferon-alpha 1 [hamsters, Genomic, 833 nt]
          Length = 833

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 ttctgcatgtgctggacatc 254
           ||||||||||||||||||||
Sbjct: 400 ttctgcatgtgctggacatc 381
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>gb|AC157950.2| Mus musculus BAC clone RP23-128A23 from chromosome 9, complete sequence
          Length = 202301

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 466    tacaagtgaagaaacctaca 485
              ||||||||||||||||||||
Sbjct: 185083 tacaagtgaagaaacctaca 185064
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>gb|AC157996.2| Mus musculus BAC clone RP24-194J17 from chromosome 9, complete sequence
          Length = 158268

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 466   tacaagtgaagaaacctaca 485
             ||||||||||||||||||||
Sbjct: 24562 tacaagtgaagaaacctaca 24543
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 124      aagtggataacaatcattggaaggatat 151
                |||||||||||||||| || ||||||||
Sbjct: 19615606 aagtggataacaatcactgcaaggatat 19615579



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 75       ctttctggttttccagttttgcgtgtgttggattta 110
                ||||| || |||| |||||||||||| |||||||||
Sbjct: 18330610 ctttcgggctttcgagttttgcgtgtcttggattta 18330575
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 222      aacaatctgcaatttctgca 241
                ||||||||||||||||||||
Sbjct: 32727389 aacaatctgcaatttctgca 32727370
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>gb|AC092667.3| Homo sapiens BAC clone RP11-549H5 from 2, complete sequence
          Length = 172574

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 414    gaggaagaccttcaagttct 433
              ||||||||||||||||||||
Sbjct: 149341 gaggaagaccttcaagttct 149360
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>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0490D09
          Length = 154430

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   aacaatctgcaatttctgca 241
             ||||||||||||||||||||
Sbjct: 90184 aacaatctgcaatttctgca 90165
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>dbj|BS000059.1| Pan troglodytes chromosome 22 clone:RP43-022N17, map 22, complete
             sequences
          Length = 127718

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 140   ttggaaggatatatgcagtttgtt 163
             ||||||||||| ||||||||||||
Sbjct: 44036 ttggaaggatacatgcagtttgtt 44059
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>emb|BX284648.12| Mouse DNA sequence from clone RP23-300F1 on chromosome 2, complete
             sequence
          Length = 128632

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    gccagcactttctggttttc 87
             ||||||||||||||||||||
Sbjct: 75496 gccagcactttctggttttc 75477
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>emb|BX276085.8| Zebrafish DNA sequence from clone CH211-194B5 in linkage group 19,
              complete sequence
          Length = 202683

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    ttaactgactgcaagcaagt 127
              ||||||||||||||||||||
Sbjct: 159640 ttaactgactgcaagcaagt 159621
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>dbj|AP001007.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-687M24, complete
             sequence
          Length = 203840

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 409   tgggagaggaagaccttcaagttc 432
             |||||||||||||| |||||||||
Sbjct: 93982 tgggagaggaagacgttcaagttc 94005
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>gb|AY449459.1| Oikopleura dioica clone BACOIKO003 5xk14, complete sequence
          Length = 158922

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 423    cttcaagttctcgggagcat 442
              ||||||||||||||||||||
Sbjct: 122858 cttcaagttctcgggagcat 122877
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>gb|AC018410.24| Homo sapiens chromosome 11, clone RP11-17G12, complete sequence
          Length = 147024

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    tcaatttcttgccagcactt 77
             ||||||||||||||||||||
Sbjct: 73690 tcaatttcttgccagcactt 73671


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,840,479
Number of Sequences: 3902068
Number of extensions: 4840479
Number of successful extensions: 114380
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114209
Number of HSP's gapped (non-prelim): 171
length of query: 536
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 513
effective length of database: 17,143,297,704
effective search space: 8794511722152
effective search space used: 8794511722152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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